AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57533


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57533.t1 MTR_8g433040 70.248 363 89 4 1 356 9 359 1.04e-175 493
MS.gene57533.t1 MTR_8g032380 70.248 363 89 4 1 356 9 359 1.04e-175 493
MS.gene57533.t1 MTR_8g032390 65.847 366 93 6 1 358 31 372 5.50e-155 440
MS.gene57533.t1 MTR_8g433030 56.011 366 96 7 1 358 31 339 9.89e-119 347
MS.gene57533.t1 MTR_3g103020 52.066 363 151 9 9 356 19 373 3.64e-108 322
MS.gene57533.t1 MTR_4g122850 54.391 353 139 12 21 356 12 359 5.86e-108 321
MS.gene57533.t1 MTR_4g109270 52.500 360 150 10 10 356 8 359 1.43e-106 317
MS.gene57533.t1 MTR_4g021785 52.247 356 149 10 9 356 8 350 3.13e-106 316
MS.gene57533.t1 MTR_4g094365 51.240 363 158 9 5 355 3 358 4.98e-106 315
MS.gene57533.t1 MTR_4g023080 51.124 356 152 10 9 356 8 349 7.09e-105 312
MS.gene57533.t1 MTR_4g023090 47.757 379 165 10 3 356 9 379 1.62e-101 305
MS.gene57533.t1 MTR_3g034180 50.133 375 148 13 9 356 122 484 7.07e-101 306
MS.gene57533.t1 MTR_6g060650 50.815 368 153 10 9 355 7 367 2.37e-100 301
MS.gene57533.t1 MTR_3g034130 52.286 350 131 13 9 333 8 346 9.76e-100 300
MS.gene57533.t1 MTR_4g117850 49.725 364 153 9 9 354 22 373 1.00e-99 300
MS.gene57533.t1 MTR_4g023070 48.396 374 155 10 10 356 3 365 3.41e-97 293
MS.gene57533.t1 MTR_3g034160 50.267 374 149 12 9 356 8 370 2.08e-96 291
MS.gene57533.t1 MTR_4g118380 50.562 356 139 10 9 334 7 355 4.85e-96 290
MS.gene57533.t1 MTR_4g116330 49.176 364 159 11 9 356 22 375 7.24e-95 288
MS.gene57533.t1 MTR_4g109280 49.451 364 156 12 5 354 3 352 1.19e-94 286
MS.gene57533.t1 MTR_4g117780 47.790 362 164 11 10 356 11 362 5.92e-94 285
MS.gene57533.t1 MTR_4g023380 47.619 378 146 11 9 355 15 371 5.90e-93 283
MS.gene57533.t1 MTR_4g023120 45.187 374 167 9 10 356 3 365 9.10e-92 279
MS.gene57533.t1 MTR_4g117770 48.760 363 161 11 9 356 10 362 9.86e-92 279
MS.gene57533.t1 MTR_4g117810 48.760 363 161 11 9 356 10 362 9.86e-92 279
MS.gene57533.t1 MTR_4g023130 46.742 353 131 10 9 356 8 308 2.80e-91 276
MS.gene57533.t1 MTR_4g117720 47.059 374 137 12 1 357 44 373 1.39e-89 274
MS.gene57533.t1 MTR_5g070130 46.842 380 171 14 1 357 1 372 5.63e-86 265
MS.gene57533.t1 MTR_4g023190 47.154 369 167 11 1 356 1 354 2.19e-85 263
MS.gene57533.t1 MTR_5g070080 44.961 387 161 14 9 357 9 381 2.86e-85 263
MS.gene57533.t1 MTR_5g097210 44.800 375 171 13 1 356 1 358 3.36e-85 263
MS.gene57533.t1 MTR_4g023150 46.883 369 169 11 1 356 1 355 8.30e-83 256
MS.gene57533.t1 MTR_1g055135 43.767 377 179 12 2 356 5 370 1.16e-81 253
MS.gene57533.t1 MTR_4g121580 44.904 363 157 11 3 350 4 338 2.05e-81 253
MS.gene57533.t1 MTR_4g023200 46.070 369 172 11 1 356 1 355 3.37e-80 249
MS.gene57533.t1 MTR_5g070088 43.147 394 171 14 4 357 1 381 8.24e-79 246
MS.gene57533.t1 MTR_4g023440 44.722 360 138 10 9 356 17 327 5.16e-78 243
MS.gene57533.t1 MTR_4g116330 43.681 364 140 11 9 356 22 336 1.40e-73 232
MS.gene57533.t1 MTR_4g117750 46.049 367 163 14 9 355 2 353 2.60e-71 230
MS.gene57533.t1 MTR_4g117750 54.717 106 42 2 257 356 373 478 1.32e-25 107
MS.gene57533.t1 MTR_8g013010 50.000 272 115 9 5 266 49 309 3.01e-70 222
MS.gene57533.t1 MTR_1g055165 39.617 366 158 10 1 356 1 313 1.51e-68 218
MS.gene57533.t1 MTR_4g117870 46.102 295 106 8 73 356 10 262 1.76e-67 213
MS.gene57533.t1 MTR_4g118400 45.055 273 108 9 89 355 58 294 5.34e-60 195
MS.gene57533.t1 MTR_7g079400 45.620 274 125 9 101 357 67 333 3.56e-57 189
MS.gene57533.t1 MTR_7g079370 39.583 336 176 11 45 357 21 352 2.05e-56 188
MS.gene57533.t1 MTR_4g116340 46.862 239 98 6 3 232 29 247 2.95e-56 184
MS.gene57533.t1 MTR_4g116320 49.533 214 92 5 154 355 43 252 1.95e-54 179
MS.gene57533.t1 MTR_1g055195 44.403 268 119 10 102 355 221 472 7.19e-54 184
MS.gene57533.t1 MTR_6g463430 52.406 187 82 5 173 356 15 197 9.89e-52 171
MS.gene57533.t1 MTR_8g040935 50.000 200 89 4 166 356 6 203 6.75e-51 169
MS.gene57533.t1 MTR_8g102520 36.438 365 163 14 9 357 7 318 8.94e-50 169
MS.gene57533.t1 MTR_2g048580 35.263 380 181 17 1 357 1 338 1.06e-49 170
MS.gene57533.t1 MTR_4g118370 42.412 257 95 9 119 356 33 255 8.72e-45 154
MS.gene57533.t1 MTR_7g117720 44.976 209 87 5 1 200 1 190 1.36e-43 152
MS.gene57533.t1 MTR_7g117720 50.575 87 33 3 280 356 186 272 3.65e-14 72.4
MS.gene57533.t1 MTR_1g055175 46.429 196 82 7 174 355 9 195 2.71e-41 144
MS.gene57533.t1 MTR_4g117530 41.004 239 98 7 124 356 47 248 1.23e-40 144
MS.gene57533.t1 MTR_4g117430 50.000 160 70 5 107 266 3 152 1.92e-38 135
MS.gene57533.t1 MTR_1g055250 43.256 215 105 7 149 352 49 257 6.22e-38 139
MS.gene57533.t1 MTR_4g114700 37.165 261 98 8 107 352 9 218 6.06e-34 125
MS.gene57533.t1 MTR_7g079420 37.218 266 123 11 106 357 905 1140 8.11e-33 130
MS.gene57533.t1 MTR_1g097560 31.198 359 211 15 10 353 36 373 1.94e-32 125
MS.gene57533.t1 MTR_1g097490 33.038 339 196 14 10 334 49 370 6.12e-32 124
MS.gene57533.t1 MTR_4g055060 34.076 314 164 15 10 299 30 324 8.60e-31 120
MS.gene57533.t1 MTR_8g098830 42.308 182 94 7 164 339 25 201 4.78e-30 115
MS.gene57533.t1 MTR_3g009310 32.812 320 171 15 10 308 42 338 1.32e-29 117
MS.gene57533.t1 MTR_3g013740 31.288 326 170 14 4 296 38 342 1.04e-28 115
MS.gene57533.t1 MTR_8g101580 29.310 348 205 16 10 334 45 374 1.05e-28 115
MS.gene57533.t1 MTR_3g014540 30.464 302 180 9 10 296 29 315 3.94e-28 113
MS.gene57533.t1 MTR_3g007360 29.282 362 210 12 13 351 55 393 4.18e-28 114
MS.gene57533.t1 MTR_5g011200 29.221 308 184 10 10 299 17 308 6.57e-28 112
MS.gene57533.t1 MTR_4g118360 51.639 122 49 4 242 355 1 120 1.74e-27 105
MS.gene57533.t1 MTR_4g107820 30.462 325 161 13 10 304 36 325 1.79e-27 111
MS.gene57533.t1 MTR_4g107780 30.462 325 161 13 10 304 36 325 1.79e-27 111
MS.gene57533.t1 MTR_2g426020 29.082 392 223 18 6 355 2 380 2.26e-27 111
MS.gene57533.t1 MTR_3g007410 29.006 362 211 12 13 351 55 393 2.61e-27 111
MS.gene57533.t1 MTR_4g107780 30.462 325 161 13 10 304 36 325 2.62e-27 111
MS.gene57533.t1 MTR_4g107820 30.462 325 161 13 10 304 36 325 2.78e-27 111
MS.gene57533.t1 MTR_7g407070 30.027 373 214 15 10 353 32 386 4.24e-27 110
MS.gene57533.t1 MTR_5g022420 28.614 339 198 15 9 326 26 341 8.16e-27 109
MS.gene57533.t1 MTR_3g436150 29.582 311 186 11 10 297 32 332 6.57e-26 107
MS.gene57533.t1 MTR_2g021150 28.803 309 188 12 9 299 13 307 9.94e-26 106
MS.gene57533.t1 MTR_3g007330 32.781 302 168 12 10 297 48 328 1.08e-25 107
MS.gene57533.t1 MTR_5g023000 60.215 93 31 2 270 356 2 94 1.29e-25 99.4
MS.gene57533.t1 MTR_3g010390 30.094 319 177 15 10 297 33 336 1.64e-25 106
MS.gene57533.t1 MTR_2g028130 27.020 396 230 14 10 355 5 391 1.68e-25 106
MS.gene57533.t1 MTR_5g057790 30.363 303 177 15 10 296 46 330 4.46e-25 105
MS.gene57533.t1 MTR_4g108820 31.058 293 152 10 9 296 41 288 4.57e-25 103
MS.gene57533.t1 MTR_3g023930 27.606 355 189 14 10 347 34 337 9.23e-25 103
MS.gene57533.t1 MTR_4g109290 42.500 160 53 6 9 163 8 133 9.59e-25 99.8
MS.gene57533.t1 MTR_1g094210 28.249 354 193 16 10 334 57 378 1.25e-24 103
MS.gene57533.t1 MTR_3g014570 30.195 308 175 11 10 297 29 316 1.52e-24 103
MS.gene57533.t1 MTR_5g057710 29.126 309 173 14 10 296 46 330 1.65e-24 103
MS.gene57533.t1 MTR_3g036290 33.110 299 167 14 10 299 22 296 1.87e-24 102
MS.gene57533.t1 MTR_1g094210 28.613 346 186 16 10 326 57 370 2.24e-24 103
MS.gene57533.t1 MTR_3g083640 28.297 364 219 14 10 350 55 399 2.48e-24 103
MS.gene57533.t1 MTR_0667s0010 27.889 398 220 18 6 355 2 380 2.51e-24 103
MS.gene57533.t1 MTR_4g122860 35.938 192 74 6 179 355 157 314 3.44e-24 102
MS.gene57533.t1 MTR_6g021880 29.240 342 199 13 21 333 31 358 6.27e-24 101
MS.gene57533.t1 MTR_3g036430 28.669 293 156 12 10 292 20 269 6.76e-24 101
MS.gene57533.t1 MTR_5g069120 39.665 179 92 6 20 183 1 178 9.70e-24 96.7
MS.gene57533.t1 MTR_3g011060 30.154 325 169 12 10 300 28 328 1.16e-23 101
MS.gene57533.t1 MTR_3g013770 30.128 312 178 10 10 299 33 326 1.19e-23 101
MS.gene57533.t1 MTR_3g030350 29.310 290 186 10 10 292 35 312 1.50e-23 100
MS.gene57533.t1 MTR_4g061340 31.562 320 158 13 10 297 26 316 2.36e-23 100
MS.gene57533.t1 MTR_1g055070 29.885 261 154 9 10 246 49 304 2.47e-23 100
MS.gene57533.t1 MTR_6g090180 26.952 397 231 13 9 354 46 434 3.65e-23 100
MS.gene57533.t1 MTR_1g068835 27.123 365 226 15 10 350 4 352 3.80e-23 99.8
MS.gene57533.t1 MTR_4g133170 25.352 355 219 16 10 338 4 338 4.35e-23 99.4
MS.gene57533.t1 MTR_7g079450 44.776 134 65 4 229 357 4 133 5.11e-23 93.6
MS.gene57533.t1 MTR_2g021770 28.070 399 226 15 12 356 14 405 5.83e-23 99.4
MS.gene57533.t1 MTR_2g055970 28.125 320 179 11 2 296 203 496 5.97e-23 100
MS.gene57533.t1 MTR_6g027910 28.052 385 211 18 13 353 12 374 6.93e-23 98.6
MS.gene57533.t1 MTR_8g467140 28.188 298 193 10 9 296 31 317 8.56e-23 97.8
MS.gene57533.t1 MTR_6g065980 29.310 290 175 12 10 292 16 282 8.78e-23 98.2
MS.gene57533.t1 MTR_1g050542 27.378 347 208 11 10 334 58 382 1.04e-22 98.6
MS.gene57533.t1 MTR_3g006570 30.921 304 166 14 10 292 21 301 1.27e-22 98.2
MS.gene57533.t1 MTR_2g028160 26.992 389 228 18 10 350 5 385 1.47e-22 98.2
MS.gene57533.t1 MTR_0044s0300 29.054 296 179 15 10 292 38 315 2.32e-22 97.4
MS.gene57533.t1 MTR_2g046920 29.054 296 191 11 9 296 23 307 3.33e-22 96.7
MS.gene57533.t1 MTR_1g097330 26.404 356 231 11 10 347 16 358 4.89e-22 96.7
MS.gene57533.t1 MTR_2g024110 26.064 376 236 16 10 355 4 367 5.11e-22 96.3
MS.gene57533.t1 MTR_2g078900 28.947 304 168 13 10 292 33 309 6.63e-22 95.9
MS.gene57533.t1 MTR_7g070440 30.769 325 175 12 4 297 1 306 8.06e-22 95.5
MS.gene57533.t1 MTR_3g007270 27.129 317 187 12 10 299 47 346 8.11e-22 96.3
MS.gene57533.t1 MTR_2g021155 31.487 343 182 16 13 326 39 357 8.92e-22 97.4
MS.gene57533.t1 MTR_2g021155 30.144 209 119 10 98 292 687 882 8.69e-11 63.9
MS.gene57533.t1 MTR_3g010520 26.361 349 202 13 10 347 25 329 9.36e-22 95.5
MS.gene57533.t1 MTR_0760s0010 29.758 289 172 12 15 293 52 319 1.15e-21 95.5
MS.gene57533.t1 MTR_5g007610 30.645 310 180 15 10 297 41 337 2.04e-21 94.7
MS.gene57533.t1 MTR_6g004660 29.841 315 183 14 8 297 14 315 2.24e-21 94.4
MS.gene57533.t1 MTR_4g037465 27.851 377 200 17 10 336 21 375 2.88e-21 94.4
MS.gene57533.t1 MTR_5g057690 29.836 305 166 13 10 296 46 320 3.14e-21 94.4
MS.gene57533.t1 MTR_1g054725 25.858 379 225 16 9 353 19 375 3.33e-21 94.0
MS.gene57533.t1 MTR_3g006670 29.167 312 178 12 10 299 49 339 3.39e-21 94.4
MS.gene57533.t1 MTR_1g068875 24.865 370 239 15 10 355 4 358 3.85e-21 94.0
MS.gene57533.t1 MTR_2g425980 28.718 390 220 22 10 355 5 380 4.00e-21 94.0
MS.gene57533.t1 MTR_3g036335 27.577 359 207 14 10 348 41 366 4.68e-21 93.6
MS.gene57533.t1 MTR_3g010870 27.946 297 178 12 10 292 37 311 5.04e-21 93.6
MS.gene57533.t1 MTR_4g129190 31.222 221 132 10 10 218 6 218 5.80e-21 93.6
MS.gene57533.t1 MTR_3g072470 29.970 337 170 17 7 297 16 332 7.47e-21 93.6
MS.gene57533.t1 MTR_3g006500 25.722 381 218 15 10 353 17 369 8.01e-21 92.8
MS.gene57533.t1 MTR_3g010970 28.664 307 165 12 13 299 51 323 8.68e-21 92.8
MS.gene57533.t1 MTR_5g057020 28.956 297 174 13 10 296 46 315 8.96e-21 92.4
MS.gene57533.t1 MTR_7g007300 27.243 301 172 12 10 292 103 374 1.23e-20 93.2
MS.gene57533.t1 MTR_7g062100 27.660 376 213 16 10 346 24 379 1.53e-20 92.4
MS.gene57533.t1 MTR_0128s0020 27.202 386 223 15 10 350 18 390 1.60e-20 92.0
MS.gene57533.t1 MTR_2g029990 28.239 301 179 11 11 292 52 334 2.31e-20 92.0
MS.gene57533.t1 MTR_3g010920 26.821 302 177 11 10 299 44 313 2.31e-20 91.7
MS.gene57533.t1 MTR_2g028110 27.540 374 227 16 10 355 4 361 2.54e-20 91.7
MS.gene57533.t1 MTR_7g056390 28.743 334 179 15 7 297 15 332 3.31e-20 91.7
MS.gene57533.t1 MTR_2g426070 26.446 363 221 14 11 336 7 360 3.31e-20 91.3
MS.gene57533.t1 MTR_6g017280 28.037 321 194 12 4 297 3 313 3.71e-20 91.3
MS.gene57533.t1 MTR_7g013590 30.897 301 176 13 13 296 39 324 3.87e-20 91.3
MS.gene57533.t1 MTR_7g070830 28.529 340 181 14 10 297 21 350 5.73e-20 90.9
MS.gene57533.t1 MTR_3g024110 27.333 300 174 11 10 292 101 373 6.01e-20 90.9
MS.gene57533.t1 MTR_7g070880 28.219 365 192 16 10 314 21 375 6.36e-20 90.9
MS.gene57533.t1 MTR_3g083010 27.431 401 225 19 10 355 6 395 6.77e-20 90.5
MS.gene57533.t1 MTR_3g030250 25.833 360 198 16 10 347 37 349 7.12e-20 90.1
MS.gene57533.t1 MTR_3g007430 28.477 302 179 10 13 296 46 328 8.61e-20 90.1
MS.gene57533.t1 MTR_2g021800 24.818 411 237 16 2 350 8 408 1.08e-19 90.1
MS.gene57533.t1 MTR_7g056003 28.614 332 176 12 7 297 12 323 1.09e-19 90.1
MS.gene57533.t1 MTR_5g069760 26.667 315 187 12 9 297 5 301 1.10e-19 89.7
MS.gene57533.t1 MTR_1g115160 28.693 352 210 17 9 345 21 346 1.18e-19 89.4
MS.gene57533.t1 MTR_2g031680 25.464 377 239 16 6 358 2 360 1.25e-19 89.7
MS.gene57533.t1 MTR_3g011100 29.936 314 172 16 10 297 235 526 1.52e-19 90.5
MS.gene57533.t1 MTR_4g030830 25.714 385 202 14 10 333 9 370 1.53e-19 89.4
MS.gene57533.t1 MTR_6g034720 43.077 130 63 4 130 252 53 178 1.92e-19 86.3
MS.gene57533.t1 MTR_3g009260 28.896 308 192 11 10 308 41 330 2.27e-19 89.0
MS.gene57533.t1 MTR_5g046300 27.517 298 179 13 10 292 4 279 2.59e-19 88.2
MS.gene57533.t1 MTR_5g046290 27.517 298 179 13 10 292 4 279 2.59e-19 88.2
MS.gene57533.t1 MTR_7g056290 29.042 334 178 16 7 297 19 336 2.73e-19 89.0
MS.gene57533.t1 MTR_3g464470 26.702 382 206 15 4 333 1 360 2.74e-19 88.6
MS.gene57533.t1 MTR_3g009240 28.231 294 183 9 10 292 36 312 2.94e-19 88.6
MS.gene57533.t1 MTR_1g056710 28.333 300 179 10 10 292 34 314 3.03e-19 88.6
MS.gene57533.t1 MTR_2g046900 30.619 307 180 15 9 296 27 319 3.04e-19 88.6
MS.gene57533.t1 MTR_3g030240 27.143 350 201 14 10 347 40 347 3.20e-19 88.2
MS.gene57533.t1 MTR_2g426060 26.598 391 226 19 10 355 6 380 3.47e-19 88.6
MS.gene57533.t1 MTR_0128s0070 26.753 385 225 14 10 350 22 393 3.60e-19 88.2
MS.gene57533.t1 MTR_2g031720 26.963 382 233 17 6 356 2 368 3.91e-19 88.2
MS.gene57533.t1 MTR_3g010620 27.036 307 169 12 13 300 39 309 4.28e-19 88.2
MS.gene57533.t1 MTR_2g021190 29.412 306 171 14 10 292 21 304 4.99e-19 87.8
MS.gene57533.t1 MTR_3g024150 30.667 300 163 16 13 292 38 312 5.20e-19 87.8
MS.gene57533.t1 MTR_5g069390 23.485 396 250 11 9 356 25 415 5.29e-19 88.6
MS.gene57533.t1 MTR_8g099460 28.354 395 211 21 7 355 2 370 6.35e-19 87.8
MS.gene57533.t1 MTR_4g013180 27.949 390 216 18 5 344 6 380 7.95e-19 87.8
MS.gene57533.t1 MTR_4g024890 26.287 369 203 15 9 328 9 357 8.21e-19 87.0
MS.gene57533.t1 MTR_2g031640 25.562 356 217 15 10 336 6 342 1.08e-18 86.7
MS.gene57533.t1 MTR_0464s0020 28.274 336 173 15 13 297 26 344 1.35e-18 87.0
MS.gene57533.t1 MTR_3g010430 28.076 317 160 13 10 292 36 318 1.38e-18 86.7
MS.gene57533.t1 MTR_4g031770 26.733 303 181 9 10 292 4 285 1.98e-18 85.9
MS.gene57533.t1 MTR_6g086825 25.369 406 235 16 6 356 66 458 3.18e-18 85.9
MS.gene57533.t1 MTR_7g055870 27.665 394 208 18 13 333 16 405 3.61e-18 85.5
MS.gene57533.t1 MTR_4g030110 25.641 390 207 13 1 338 21 379 3.79e-18 85.1
MS.gene57533.t1 MTR_8g073550 32.161 199 104 9 9 188 29 215 3.90e-18 82.8
MS.gene57533.t1 MTR_7g056820 25.758 396 194 21 4 337 1 358 4.05e-18 85.1
MS.gene57533.t1 MTR_0064s0160 26.667 375 202 17 9 336 41 389 4.08e-18 85.5
MS.gene57533.t1 MTR_2g028140 25.000 404 226 21 10 355 5 389 4.33e-18 85.5
MS.gene57533.t1 MTR_4g023430 47.706 109 48 4 1 105 32 135 4.37e-18 82.4
MS.gene57533.t1 MTR_2g047832 27.329 322 183 14 9 296 28 332 5.50e-18 85.1
MS.gene57533.t1 MTR_1g068860 26.136 352 220 15 10 336 4 340 6.01e-18 84.7
MS.gene57533.t1 MTR_2g078850 29.221 308 159 16 13 292 33 309 6.08e-18 84.3
MS.gene57533.t1 MTR_2g021050 26.718 393 206 18 10 355 5 362 6.46e-18 84.3
MS.gene57533.t1 MTR_2g426090 26.685 371 220 19 4 336 1 357 7.92e-18 84.3
MS.gene57533.t1 MTR_3g024040 30.612 294 165 15 17 297 38 305 8.02e-18 84.3
MS.gene57533.t1 MTR_3g464500 27.632 380 208 16 4 333 21 383 8.96e-18 84.3
MS.gene57533.t1 MTR_1g054575 28.155 309 171 15 10 296 52 331 9.40e-18 85.1
MS.gene57533.t1 MTR_2g021950 25.907 386 223 16 13 350 19 389 1.00e-17 84.0
MS.gene57533.t1 MTR_7g056503 25.824 364 223 15 9 333 20 375 1.24e-17 84.0
MS.gene57533.t1 MTR_8g062660 25.352 355 200 14 10 330 22 345 1.26e-17 84.7
MS.gene57533.t1 MTR_7g055930 28.030 396 204 19 13 333 16 405 1.73e-17 83.6
MS.gene57533.t1 MTR_0115s0020 22.646 393 255 13 10 357 10 398 1.76e-17 83.6
MS.gene57533.t1 MTR_2g024100 27.095 358 200 17 25 336 22 364 1.77e-17 83.6
MS.gene57533.t1 MTR_4g117550 25.897 390 213 16 9 356 16 371 2.55e-17 82.8
MS.gene57533.t1 MTR_2g104340 26.582 395 230 21 9 356 13 394 2.84e-17 82.8
MS.gene57533.t1 MTR_7g078860 28.399 331 177 14 9 297 8 320 3.01e-17 82.8
MS.gene57533.t1 MTR_7g060960 28.963 328 170 15 10 312 32 321 3.79e-17 82.0
MS.gene57533.t1 MTR_2g104280 25.862 406 244 17 1 356 5 403 3.80e-17 82.4
MS.gene57533.t1 MTR_5g097820 29.134 254 134 11 2 220 15 257 4.18e-17 80.5
MS.gene57533.t1 MTR_2g026010 27.034 381 224 20 10 355 4 365 4.26e-17 82.4
MS.gene57533.t1 MTR_5g069930 25.484 310 202 11 9 297 5 306 5.51e-17 81.6
MS.gene57533.t1 MTR_3g058480 28.750 320 175 14 10 302 39 332 5.73e-17 81.3
MS.gene57533.t1 MTR_5g097680 23.040 421 240 14 9 356 16 425 6.21e-17 82.0
MS.gene57533.t1 MTR_5g009060 29.909 331 179 15 10 298 25 344 6.30e-17 81.6
MS.gene57533.t1 MTR_0129s0070 26.316 399 215 17 13 357 20 393 7.61e-17 81.6
MS.gene57533.t1 MTR_0129s0050 24.878 410 222 16 13 356 17 406 7.93e-17 81.6
MS.gene57533.t1 MTR_3g030310 29.221 308 171 16 10 292 21 306 8.75e-17 81.3
MS.gene57533.t1 MTR_7g055987 27.044 318 170 15 13 297 23 311 1.09e-16 80.9
MS.gene57533.t1 MTR_7g066030 25.600 375 214 15 7 330 18 378 1.31e-16 80.9
MS.gene57533.t1 MTR_2g078870 29.480 173 104 6 120 292 78 232 1.44e-16 79.7
MS.gene57533.t1 MTR_3g437520 24.460 417 231 15 13 357 26 430 1.65e-16 80.9
MS.gene57533.t1 MTR_1g112930 27.797 295 180 11 10 291 25 299 2.21e-16 80.1
MS.gene57533.t1 MTR_2g046830 28.571 301 186 13 9 296 24 308 2.35e-16 80.1
MS.gene57533.t1 MTR_4g030090 26.688 311 189 11 11 292 15 315 3.54e-16 79.7
MS.gene57533.t1 MTR_2g022000 25.000 400 235 17 9 350 15 407 3.66e-16 79.7
MS.gene57533.t1 MTR_2g461450 29.054 296 185 11 10 297 18 296 4.02e-16 79.0
MS.gene57533.t1 MTR_3g030330 27.119 295 181 10 10 292 20 292 4.95e-16 79.0
MS.gene57533.t1 MTR_1g023400 26.016 369 231 18 10 354 3 353 5.27e-16 78.6
MS.gene57533.t1 MTR_6g007135 27.653 311 185 16 10 296 26 320 5.46e-16 79.0
MS.gene57533.t1 MTR_0242s0060 28.012 332 180 17 9 296 8 324 5.48e-16 79.0
MS.gene57533.t1 MTR_0242s0040 28.012 332 180 17 9 296 8 324 5.48e-16 79.0
MS.gene57533.t1 MTR_7g066100 26.500 400 227 17 9 355 10 395 5.99e-16 79.0
MS.gene57533.t1 MTR_0831s0010 25.316 395 236 14 3 357 43 418 6.44e-16 79.0
MS.gene57533.t1 MTR_7g091630 26.074 326 204 11 3 297 25 344 6.66e-16 79.0
MS.gene57533.t1 MTR_1g058190 27.907 301 166 13 9 292 34 300 6.86e-16 78.6
MS.gene57533.t1 MTR_0097s0030 23.464 358 224 10 10 333 14 355 7.18e-16 78.6
MS.gene57533.t1 MTR_2g047240 23.464 358 224 10 10 333 14 355 7.18e-16 78.6
MS.gene57533.t1 MTR_4g028510 24.570 407 233 15 6 356 12 400 7.91e-16 79.0
MS.gene57533.t1 MTR_7g066850 27.215 316 189 12 10 298 23 324 8.45e-16 78.6
MS.gene57533.t1 MTR_4g019990 25.816 337 200 11 6 305 2 325 8.62e-16 78.2
MS.gene57533.t1 MTR_3g024130 28.261 276 155 13 96 346 52 309 9.20e-16 77.4
MS.gene57533.t1 MTR_7g055977 29.630 324 180 15 4 297 1 306 9.66e-16 78.2
MS.gene57533.t1 MTR_1g055055 23.906 297 179 10 10 292 26 289 1.03e-15 77.8
MS.gene57533.t1 MTR_7g066000 28.395 324 187 17 7 297 22 333 1.06e-15 78.2
MS.gene57533.t1 MTR_1g007450 28.530 347 196 16 10 313 12 349 1.14e-15 78.2
MS.gene57533.t1 MTR_1g088120 27.976 336 193 15 1 297 1 326 1.57e-15 77.8
MS.gene57533.t1 MTR_3g096250 28.082 292 150 8 10 292 47 287 1.63e-15 77.0
MS.gene57533.t1 MTR_7g056170 28.169 355 165 17 1 297 66 388 1.75e-15 77.8
MS.gene57533.t1 MTR_6g053260 28.846 312 165 16 10 292 337 620 1.84e-15 78.2
MS.gene57533.t1 MTR_7g445890 24.920 313 176 13 10 292 16 299 2.15e-15 77.0
MS.gene57533.t1 MTR_2g025960 26.621 293 167 14 104 355 5 290 2.37e-15 76.3
MS.gene57533.t1 MTR_2g043410 27.640 322 181 13 13 297 25 331 2.55e-15 77.0
MS.gene57533.t1 MTR_1g115185 27.077 325 178 15 5 299 34 329 2.61e-15 77.0
MS.gene57533.t1 MTR_5g059430 24.129 373 198 15 9 314 25 379 2.74e-15 77.0
MS.gene57533.t1 MTR_5g097220 26.209 393 195 18 13 341 16 377 3.27e-15 76.6
MS.gene57533.t1 MTR_4g030980 24.878 410 206 16 10 333 15 408 4.03e-15 76.6
MS.gene57533.t1 MTR_2g021252 23.851 348 213 12 13 338 50 367 4.04e-15 76.3
MS.gene57533.t1 MTR_7g035295 24.074 378 203 15 10 336 16 360 4.07e-15 76.3
MS.gene57533.t1 MTR_7g060940 28.086 324 176 13 10 297 22 324 4.44e-15 76.3
MS.gene57533.t1 MTR_5g096710 29.653 317 170 15 10 292 23 320 4.47e-15 76.3
MS.gene57533.t1 MTR_8g467670 24.658 365 214 12 2 324 7 352 6.86e-15 75.5
MS.gene57533.t1 MTR_7g077970 28.060 335 180 13 10 297 7 327 7.10e-15 75.9
MS.gene57533.t1 MTR_4g030760 24.397 373 195 13 10 333 73 407 7.60e-15 75.9
MS.gene57533.t1 MTR_4g014370 22.772 404 250 13 9 356 10 407 7.68e-15 75.5
MS.gene57533.t1 MTR_0054s0090 23.399 406 236 14 9 356 16 404 7.72e-15 75.5
MS.gene57533.t1 MTR_1g055375 26.333 300 187 11 13 292 7 292 8.33e-15 75.1
MS.gene57533.t1 MTR_2g021210 28.082 292 182 10 10 292 84 356 9.09e-15 75.5
MS.gene57533.t1 MTR_5g096630 26.786 280 153 10 10 247 18 287 9.50e-15 75.5
MS.gene57533.t1 MTR_8g039500 26.667 345 208 16 1 314 1 331 9.69e-15 74.7
MS.gene57533.t1 MTR_8g464770 24.810 395 221 15 9 355 11 377 1.04e-14 75.1
MS.gene57533.t1 MTR_4g030790 27.063 303 151 13 10 288 19 275 1.11e-14 74.7
MS.gene57533.t1 MTR_7g017130 26.933 401 216 17 10 357 18 394 1.12e-14 75.1
MS.gene57533.t1 MTR_5g057643 28.440 218 130 11 10 213 46 251 1.46e-14 73.2
MS.gene57533.t1 MTR_5g097330 24.121 398 243 13 2 350 8 395 1.61e-14 74.7
MS.gene57533.t1 MTR_1g053510 23.529 408 229 15 13 357 18 405 1.63e-14 74.7
MS.gene57533.t1 MTR_2g047892 30.380 237 123 11 10 223 22 239 1.88e-14 74.3
MS.gene57533.t1 MTR_7g062060 26.979 341 179 15 9 297 11 333 2.07e-14 74.3
MS.gene57533.t1 MTR_7g061060 26.250 320 189 13 9 297 12 315 2.35e-14 73.9
MS.gene57533.t1 MTR_1g061330 25.806 372 236 15 10 357 4 359 2.39e-14 73.9
MS.gene57533.t1 MTR_7g056200 26.959 319 171 13 9 297 22 308 2.71e-14 73.9
MS.gene57533.t1 MTR_3g030320 27.513 189 125 5 105 292 46 223 2.77e-14 73.2
MS.gene57533.t1 MTR_7g066010 26.441 295 184 11 7 272 18 308 3.27e-14 73.6
MS.gene57533.t1 MTR_3g011120 25.723 346 207 12 1 313 5 333 3.70e-14 73.2
MS.gene57533.t1 MTR_3g009250 30.698 215 133 7 10 219 41 244 4.81e-14 71.6
MS.gene57533.t1 MTR_7g057270 26.935 323 192 12 10 297 26 339 5.75e-14 73.2
MS.gene57533.t1 MTR_6g017270 28.283 198 122 7 10 189 9 204 7.97e-14 72.0
MS.gene57533.t1 MTR_3g010870 28.632 234 128 11 10 229 37 245 8.25e-14 71.6
MS.gene57533.t1 MTR_4g080200 25.212 353 214 19 10 338 3 329 8.96e-14 72.0
MS.gene57533.t1 MTR_6g017295 25.926 243 145 8 81 297 20 253 9.33e-14 72.8
MS.gene57533.t1 MTR_6g013270 24.847 326 194 13 1 299 20 321 9.46e-14 72.4
MS.gene57533.t1 MTR_8g101940 27.826 230 126 9 10 218 2 212 9.72e-14 72.0
MS.gene57533.t1 MTR_4g013175 25.481 416 221 17 1 342 1 401 1.03e-13 72.4
MS.gene57533.t1 MTR_7g056760 26.154 325 186 13 9 294 22 331 1.09e-13 72.0
MS.gene57533.t1 MTR_4g028750 26.404 356 198 15 6 313 12 351 1.59e-13 71.6
MS.gene57533.t1 MTR_3g007300 28.013 307 154 16 10 299 49 305 1.93e-13 71.2
MS.gene57533.t1 MTR_5g096900 26.174 298 175 10 2 266 4 289 2.45e-13 70.5
MS.gene57533.t1 MTR_7g077990 26.006 323 182 12 10 297 17 317 2.50e-13 70.9
MS.gene57533.t1 MTR_8g012090 23.460 341 202 13 2 313 8 318 2.67e-13 70.5
MS.gene57533.t1 MTR_4g129160 26.377 345 188 15 4 297 1 330 2.78e-13 70.5
MS.gene57533.t1 MTR_7g111700 25.210 357 231 12 13 350 18 357 3.64e-13 70.1
MS.gene57533.t1 MTR_7g017040 25.066 379 208 13 9 333 15 371 3.94e-13 70.5
MS.gene57533.t1 MTR_0128s0010 24.791 359 205 14 3 314 14 354 3.98e-13 70.5
MS.gene57533.t1 MTR_8g033110 23.131 428 236 15 2 356 6 413 4.18e-13 70.5
MS.gene57533.t1 MTR_3g096280 26.174 298 161 11 22 299 17 275 4.39e-13 69.7
MS.gene57533.t1 MTR_7g009265 23.000 300 182 8 81 336 10 304 5.08e-13 69.7
MS.gene57533.t1 MTR_7g028660 26.045 311 203 10 9 297 10 315 5.17e-13 70.1
MS.gene57533.t1 MTR_2g047878 25.197 381 226 14 2 353 13 363 5.28e-13 69.7
MS.gene57533.t1 MTR_0054s0100 23.039 408 237 14 9 356 16 406 6.10e-13 69.7
MS.gene57533.t1 MTR_2g066200 25.429 350 215 14 1 313 1 341 6.51e-13 69.7
MS.gene57533.t1 MTR_5g068040 31.111 225 114 10 10 218 16 215 8.24e-13 69.3
MS.gene57533.t1 MTR_7g056260 27.900 319 177 17 13 297 17 316 8.68e-13 68.9
MS.gene57533.t1 MTR_2g437110 24.627 402 214 17 10 353 22 392 1.16e-12 69.3
MS.gene57533.t1 MTR_3g023940 25.879 313 186 11 10 299 34 323 1.36e-12 68.6
MS.gene57533.t1 MTR_7g061090 25.000 332 190 13 9 297 21 336 1.48e-12 68.6
MS.gene57533.t1 MTR_7g091640 27.134 328 194 16 3 297 28 343 1.57e-12 68.6
MS.gene57533.t1 MTR_3g058470 27.451 306 156 11 10 292 37 299 2.20e-12 67.8
MS.gene57533.t1 MTR_7g016930 25.081 307 192 9 9 293 15 305 2.44e-12 67.4
MS.gene57533.t1 MTR_4g055820 26.301 365 204 18 1 313 5 356 2.85e-12 67.4
MS.gene57533.t1 MTR_8g046310 24.548 387 218 17 13 355 19 375 3.80e-12 67.4
MS.gene57533.t1 MTR_3g006530 26.198 313 173 15 10 292 40 324 4.33e-12 67.0
MS.gene57533.t1 MTR_1004s0010 30.366 191 111 9 105 293 119 289 4.37e-12 67.0
MS.gene57533.t1 MTR_5g023570 37.037 108 65 2 5 112 32 136 4.41e-12 63.5
MS.gene57533.t1 MTR_7g061050 25.077 323 186 14 9 297 12 312 4.90e-12 67.0
MS.gene57533.t1 MTR_2g010900 25.333 300 189 10 28 297 1 295 4.95e-12 67.0
MS.gene57533.t1 MTR_5g072060 26.593 361 215 15 9 336 5 348 5.76e-12 67.4
MS.gene57533.t1 MTR_7g055830 25.269 372 177 16 13 333 16 337 7.10e-12 66.2
MS.gene57533.t1 MTR_1g442850 26.316 323 174 13 9 292 4 301 9.76e-12 65.9
MS.gene57533.t1 MTR_7g078900 27.576 330 184 12 13 297 15 334 9.81e-12 66.2
MS.gene57533.t1 MTR_4g006270 26.087 299 169 13 10 290 4 268 1.09e-11 65.9
MS.gene57533.t1 MTR_5g057040 30.769 169 96 8 10 165 46 206 1.20e-11 66.6
MS.gene57533.t1 MTR_1g055200 44.156 77 36 2 103 178 5 75 1.21e-11 61.2
MS.gene57533.t1 MTR_0649s0020 26.579 380 198 19 10 333 11 365 1.68e-11 65.5
MS.gene57533.t1 MTR_4g033495 26.625 323 186 15 10 297 27 333 1.88e-11 65.5
MS.gene57533.t1 MTR_1g055065 28.019 207 119 9 104 292 20 214 2.00e-11 64.3
MS.gene57533.t1 MTR_3g083660 30.675 163 90 6 136 292 61 206 2.08e-11 64.3
MS.gene57533.t1 MTR_4g028680 24.069 403 238 16 6 356 12 398 2.21e-11 65.1
MS.gene57533.t1 MTR_3g058440 29.719 249 133 11 10 234 35 265 2.42e-11 64.3
MS.gene57533.t1 MTR_5g048160 23.242 327 210 11 10 299 4 326 2.90e-11 64.7
MS.gene57533.t1 MTR_2g010950 24.290 317 205 10 10 297 20 330 2.97e-11 64.7
MS.gene57533.t1 MTR_7g079640 27.059 340 190 16 9 313 12 328 3.24e-11 64.3
MS.gene57533.t1 MTR_5g022090 25.083 303 173 12 10 292 34 302 3.32e-11 64.3
MS.gene57533.t1 MTR_6g017305 27.604 192 117 8 121 297 18 202 3.37e-11 63.5
MS.gene57533.t1 MTR_5g008530 59.574 47 18 1 10 56 18 63 7.01e-11 58.2
MS.gene57533.t1 MTR_1g071010 24.684 316 197 14 11 297 16 319 7.83e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57533.t1 AT3G23880 29.275 345 219 11 3 334 7 339 3.69e-28 113
MS.gene57533.t1 AT3G06240 26.722 363 210 13 10 326 36 388 2.25e-25 106
MS.gene57533.t1 AT3G16210 28.155 309 168 12 9 300 4 275 2.18e-18 85.9
MS.gene57533.t1 AT4G12560 28.115 313 188 14 10 297 4 304 4.94e-17 82.0
MS.gene57533.t1 AT4G12560 28.115 313 188 14 10 297 4 304 4.94e-17 82.0
MS.gene57533.t1 AT4G12560 28.115 313 188 14 10 297 4 304 4.94e-17 82.0
MS.gene57533.t1 AT5G49610 27.815 302 166 15 11 288 10 283 3.45e-15 76.3
MS.gene57533.t1 AT3G16590 25.817 306 196 11 10 297 5 297 4.68e-14 73.2
MS.gene57533.t1 AT1G50870 24.675 308 198 13 6 299 27 314 2.99e-13 70.9
MS.gene57533.t1 AT3G10430 27.982 218 134 8 10 218 5 208 3.21e-13 70.5
MS.gene57533.t1 AT3G17710 25.000 308 200 14 6 298 2 293 1.83e-12 68.2
MS.gene57533.t1 AT3G08750 27.562 283 164 15 10 280 12 265 8.10e-12 66.2
MS.gene57533.t1 AT5G50220 25.773 291 163 13 10 292 33 278 1.83e-11 65.1
MS.gene57533.t1 AT4G19940 23.714 350 219 13 10 326 35 369 1.84e-11 65.5
MS.gene57533.t1 AT4G04690 26.050 238 137 10 10 234 11 222 2.24e-11 65.1

Find 71 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGTCTTTGATTTAA+TGG 0.073805 8.3:-62090239 MS.gene57533:CDS
TATTCTTTGTATAAAATTAA+AGG 0.162776 8.3:-62090634 MS.gene57533:CDS
ATAATTGGACAATTGAAATA+TGG 0.213992 8.3:-62090108 MS.gene57533:CDS
ATACCTCTTCCAGATGATTT+TGG 0.214542 8.3:-62090199 MS.gene57533:CDS
TCAAGAACTCCATCTCCTTT+TGG 0.259855 8.3:-62090736 MS.gene57533:CDS
TATTATGATTTGTGGGTATC+TGG 0.266408 8.3:-62090163 MS.gene57533:CDS
CGACGTCATCCATATGGTTT+TGG 0.284549 8.3:-62090490 MS.gene57533:CDS
TAATCCTGCTTTGGAAGCTT+TGG 0.296435 8.3:+62090321 None:intergenic
TGAAACAGAATCATGGTTAA+TGG 0.320662 8.3:+62090687 None:intergenic
AAACGTAAAAGAGACTTTAC+TGG 0.325513 8.3:+62090856 None:intergenic
GGTATTCAAATAAGTGAATT+GGG 0.329052 8.3:+62090354 None:intergenic
TATTTCTTTGTAAAACTTAG+AGG 0.333521 8.3:+62090552 None:intergenic
ACTTTACTGGCAACCTCAAC+TGG 0.335329 8.3:+62090869 None:intergenic
CTGGAGAATTTCTCAGTCTA+TGG 0.350093 8.3:-62090144 MS.gene57533:CDS
AATCCTGCTTTGGAAGCTTT+GGG 0.358664 8.3:+62090322 None:intergenic
AGGTATTCAAATAAGTGAAT+TGG 0.369764 8.3:+62090353 None:intergenic
AAACGGAGACTCTGTATAAA+TGG 0.386611 8.3:+62089889 None:intergenic
AAAGCAGGATTATTCTTGAA+TGG 0.393065 8.3:-62090310 MS.gene57533:CDS
ATTCAAGAATAATCCTGCTT+TGG 0.397965 8.3:+62090312 None:intergenic
TCTTGAATGGGACTATTCAT+TGG 0.400167 8.3:-62090297 MS.gene57533:CDS
TAATTGGACAATTGAAATAT+GGG 0.403350 8.3:-62090107 MS.gene57533:CDS
TAACCATGATTCTGTTTCAC+TGG 0.404123 8.3:-62090683 MS.gene57533:CDS
GTCCGAAAAGTAGAAAAGTA+TGG 0.421923 8.3:+62090659 None:intergenic
ATCTTCGGTATTATGATTTG+TGG 0.423808 8.3:-62090171 MS.gene57533:CDS
GAATGGGACTATTCATTGGT+TGG 0.440146 8.3:-62090293 MS.gene57533:CDS
AGATCATGGCCAAAATCATC+TGG 0.446975 8.3:+62090190 None:intergenic
AAGCAGGATTATTCTTGAAT+GGG 0.452172 8.3:-62090309 MS.gene57533:CDS
TCTCATTGAGAGATAATAAG+TGG 0.452326 8.3:-62090393 MS.gene57533:CDS
CGGTCATAACCAAAACCATA+TGG 0.452973 8.3:+62090481 None:intergenic
ATTCACTTATTTGAATACCT+TGG 0.464880 8.3:-62090350 MS.gene57533:CDS
AATTGAAATATGGGTGATGA+AGG 0.467515 8.3:-62090098 MS.gene57533:CDS
TCAAATGCATTTGTAAGTCA+TGG 0.471120 8.3:-62090834 MS.gene57533:CDS
TATCCCAAAGCTTCCAAAGC+AGG 0.472312 8.3:-62090325 MS.gene57533:CDS
GCAAGTGATTTGGTAGCAAA+AGG 0.472518 8.3:+62090520 None:intergenic
TCGATGGTATGCAAGTGATT+TGG 0.475367 8.3:+62090510 None:intergenic
TACCATCGACGTCATCCATA+TGG 0.479087 8.3:-62090496 MS.gene57533:CDS
CCGATCAAGAGATGATTACT+TGG 0.491735 8.3:-62090461 MS.gene57533:CDS
TTGGTGAAGTATAATGATAA+AGG 0.492510 8.3:-62089959 MS.gene57533:CDS
GGTCCACCAGGGAGTGAAAA+CGG 0.498553 8.3:+62089872 None:intergenic
GAATCTGAATACATCTAAAG+TGG 0.499583 8.3:-62089912 MS.gene57533:CDS
TCTTCGGTATTATGATTTGT+GGG 0.502368 8.3:-62090170 MS.gene57533:CDS
AATACAAACAACATTCGTCT+TGG 0.503398 8.3:-62090075 MS.gene57533:CDS
AAATTAAAGGTTCATGCAGA+GGG 0.504931 8.3:-62090621 MS.gene57533:CDS
AAGTTTGATCATGGTCCACC+AGG 0.510093 8.3:+62089860 None:intergenic
AATCATAATACCGAAGATCA+TGG 0.514906 8.3:+62090176 None:intergenic
TTGTCTTTGATTTAATGGAA+AGG 0.526787 8.3:-62090234 MS.gene57533:CDS
GGAAGCTTTGGGATAATCCA+AGG 0.529340 8.3:+62090333 None:intergenic
ATCAAGAGATGATTACTTGG+TGG 0.531322 8.3:-62090458 MS.gene57533:CDS
TCTATAGAGCGAATCCCAAA+AGG 0.537324 8.3:+62090721 None:intergenic
TACTCATTCAAATCCAGTTG+AGG 0.552000 8.3:-62090882 MS.gene57533:CDS
TCTTTGTAAAACTTAGAGGA+TGG 0.552236 8.3:+62090556 None:intergenic
GTTCAACAAACCTCTACGTA+TGG 0.560266 8.3:-62090582 MS.gene57533:CDS
TGGCCAAAATCATCTGGAAG+AGG 0.568738 8.3:+62090196 None:intergenic
GAGCGAATCCCAAAAGGAGA+TGG 0.569021 8.3:+62090727 None:intergenic
CGCAAAGTGAGGATCAAAAG+AGG 0.569883 8.3:+62090801 None:intergenic
AACTGATGGTGCTAGTGGAT+TGG 0.574765 8.3:-62089978 MS.gene57533:CDS
AAAATTAAAGGTTCATGCAG+AGG 0.574844 8.3:-62090622 MS.gene57533:CDS
GGTGATATTGTTGGAACTGA+TGG 0.589833 8.3:-62089992 MS.gene57533:CDS
CCAAGTAATCATCTCTTGAT+CGG 0.593246 8.3:+62090461 None:intergenic
GGTCCAGTGAAACAGAATCA+TGG 0.595041 8.3:+62090680 None:intergenic
ATTTGAATGAGTAATTCAGC+AGG 0.595133 8.3:+62090892 None:intergenic
GTTGGAACTGATGGTGCTAG+TGG 0.597956 8.3:-62089983 MS.gene57533:CDS
ATATAGGGGAAAAGCACAGA+AGG 0.601742 8.3:+62090029 None:intergenic
TTGGTAGCAAAAGGAGACAA+AGG 0.603002 8.3:+62090529 None:intergenic
TTCTCATGTTGATGTTTCCG+CGG 0.608501 8.3:-62090776 MS.gene57533:CDS
ACATGAGAATTCGCAAAGTG+AGG 0.613825 8.3:+62090790 None:intergenic
AACCATATGGATGACGTCGA+TGG 0.616886 8.3:+62090494 None:intergenic
TATTAACACAACTCTTGCCG+CGG 0.631370 8.3:+62090759 None:intergenic
AGGATGGATTCCATACGTAG+AGG 0.640105 8.3:+62090572 None:intergenic
AGTTTGATCATGGTCCACCA+GGG 0.660460 8.3:+62089861 None:intergenic
GTATTCAAATAAGTGAATTG+GGG 0.661738 8.3:+62090355 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTCTTTGTATAAAATTAA+AGG - chr8.3:62090156-62090175 MS.gene57533:CDS 10.0%
!! ATAATTGGACAATTGAAATA+TGG - chr8.3:62090682-62090701 MS.gene57533:CDS 20.0%
!! TAATTGGACAATTGAAATAT+GGG - chr8.3:62090683-62090702 MS.gene57533:CDS 20.0%
!! TATTTCTTTGTAAAACTTAG+AGG + chr8.3:62090241-62090260 None:intergenic 20.0%
!!! GGAATAGAAATTTTCATAAT+TGG - chr8.3:62090667-62090686 MS.gene57533:CDS 20.0%
!!! TATTGTTGTCTTTGATTTAA+TGG - chr8.3:62090551-62090570 MS.gene57533:CDS 20.0%
! AGGTATTCAAATAAGTGAAT+TGG + chr8.3:62090440-62090459 None:intergenic 25.0%
! ATTCACTTATTTGAATACCT+TGG - chr8.3:62090440-62090459 MS.gene57533:CDS 25.0%
! GGTATTCAAATAAGTGAATT+GGG + chr8.3:62090439-62090458 None:intergenic 25.0%
! GTATTCAAATAAGTGAATTG+GGG + chr8.3:62090438-62090457 None:intergenic 25.0%
! TTGGTGAAGTATAATGATAA+AGG - chr8.3:62090831-62090850 MS.gene57533:CDS 25.0%
!! ACTTTTTGTAGAGTATATAG+GGG + chr8.3:62090778-62090797 None:intergenic 25.0%
!! TTGTCTTTGATTTAATGGAA+AGG - chr8.3:62090556-62090575 MS.gene57533:CDS 25.0%
!!! CACTTTTTGTAGAGTATATA+GGG + chr8.3:62090779-62090798 None:intergenic 25.0%
AAAATTAAAGGTTCATGCAG+AGG - chr8.3:62090168-62090187 MS.gene57533:CDS 30.0%
AAACGTAAAAGAGACTTTAC+TGG + chr8.3:62089937-62089956 None:intergenic 30.0%
AAAGCAGGATTATTCTTGAA+TGG - chr8.3:62090480-62090499 MS.gene57533:CDS 30.0%
AAATTAAAGGTTCATGCAGA+GGG - chr8.3:62090169-62090188 MS.gene57533:CDS 30.0%
AAGCAGGATTATTCTTGAAT+GGG - chr8.3:62090481-62090500 MS.gene57533:CDS 30.0%
AATACAAACAACATTCGTCT+TGG - chr8.3:62090715-62090734 MS.gene57533:CDS 30.0%
AATCATAATACCGAAGATCA+TGG + chr8.3:62090617-62090636 None:intergenic 30.0%
AATTGAAATATGGGTGATGA+AGG - chr8.3:62090692-62090711 MS.gene57533:CDS 30.0%
ACAAAAAGTGGTGATATTGT+TGG - chr8.3:62090789-62090808 MS.gene57533:CDS 30.0%
AGCAAAAACTTCATCACAAT+TGG - chr8.3:62090368-62090387 MS.gene57533:CDS 30.0%
ATCTTCGGTATTATGATTTG+TGG - chr8.3:62090619-62090638 MS.gene57533:CDS 30.0%
ATTCAAGAATAATCCTGCTT+TGG + chr8.3:62090481-62090500 None:intergenic 30.0%
ATTTGAATGAGTAATTCAGC+AGG + chr8.3:62089901-62089920 None:intergenic 30.0%
CCTATATACTCTACAAAAAG+TGG - chr8.3:62090777-62090796 MS.gene57533:CDS 30.0%
GAATCTGAATACATCTAAAG+TGG - chr8.3:62090878-62090897 MS.gene57533:CDS 30.0%
TCAAATGCATTTGTAAGTCA+TGG - chr8.3:62089956-62089975 MS.gene57533:CDS 30.0%
TCTCATTGAGAGATAATAAG+TGG - chr8.3:62090397-62090416 MS.gene57533:CDS 30.0%
TCTTTGTAAAACTTAGAGGA+TGG + chr8.3:62090237-62090256 None:intergenic 30.0%
TGAAACAGAATCATGGTTAA+TGG + chr8.3:62090106-62090125 None:intergenic 30.0%
! ATGCAGAGGGTTTATATTTT+TGG - chr8.3:62090182-62090201 MS.gene57533:CDS 30.0%
! TATTATGATTTGTGGGTATC+TGG - chr8.3:62090627-62090646 MS.gene57533:CDS 30.0%
! TCTTCGGTATTATGATTTGT+GGG - chr8.3:62090620-62090639 MS.gene57533:CDS 30.0%
! TTGTGATGAAGTTTTTGCTA+AGG + chr8.3:62090367-62090386 None:intergenic 30.0%
!! GACCATACTTTTCTACTTTT+CGG - chr8.3:62090129-62090148 MS.gene57533:CDS 30.0%
!!! CCACTTTTTGTAGAGTATAT+AGG + chr8.3:62090780-62090799 None:intergenic 30.0%
AAACGGAGACTCTGTATAAA+TGG + chr8.3:62090904-62090923 None:intergenic 35.0%
ATCAAGAGATGATTACTTGG+TGG - chr8.3:62090332-62090351 MS.gene57533:CDS 35.0%
CCAAGTAATCATCTCTTGAT+CGG + chr8.3:62090332-62090351 None:intergenic 35.0%
GTCCGAAAAGTAGAAAAGTA+TGG + chr8.3:62090134-62090153 None:intergenic 35.0%
TAACCATGATTCTGTTTCAC+TGG - chr8.3:62090107-62090126 MS.gene57533:CDS 35.0%
TACTCATTCAAATCCAGTTG+AGG - chr8.3:62089908-62089927 MS.gene57533:CDS 35.0%
TCTTGAATGGGACTATTCAT+TGG - chr8.3:62090493-62090512 MS.gene57533:CDS 35.0%
! ATACCTCTTCCAGATGATTT+TGG - chr8.3:62090591-62090610 MS.gene57533:CDS 35.0%
!! ATGATTTTGGCCATGATCTT+CGG - chr8.3:62090604-62090623 MS.gene57533:CDS 35.0%
ACATGAGAATTCGCAAAGTG+AGG + chr8.3:62090003-62090022 None:intergenic 40.0%
AGATCATGGCCAAAATCATC+TGG + chr8.3:62090603-62090622 None:intergenic 40.0%
CCGATCAAGAGATGATTACT+TGG - chr8.3:62090329-62090348 MS.gene57533:CDS 40.0%
CGGTCATAACCAAAACCATA+TGG + chr8.3:62090312-62090331 None:intergenic 40.0%
CTGGAGAATTTCTCAGTCTA+TGG - chr8.3:62090646-62090665 MS.gene57533:CDS 40.0%
GAATGGGACTATTCATTGGT+TGG - chr8.3:62090497-62090516 MS.gene57533:CDS 40.0%
GGTGATATTGTTGGAACTGA+TGG - chr8.3:62090798-62090817 MS.gene57533:CDS 40.0%
GTTCAACAAACCTCTACGTA+TGG - chr8.3:62090208-62090227 MS.gene57533:CDS 40.0%
TATTAACACAACTCTTGCCG+CGG + chr8.3:62090034-62090053 None:intergenic 40.0%
TCGATGGTATGCAAGTGATT+TGG + chr8.3:62090283-62090302 None:intergenic 40.0%
TCTATAGAGCGAATCCCAAA+AGG + chr8.3:62090072-62090091 None:intergenic 40.0%
TTCTCATGTTGATGTTTCCG+CGG - chr8.3:62090014-62090033 MS.gene57533:CDS 40.0%
! ATATAGGGGAAAAGCACAGA+AGG + chr8.3:62090764-62090783 None:intergenic 40.0%
! CAAGAACTCCATCTCCTTTT+GGG - chr8.3:62090055-62090074 MS.gene57533:CDS 40.0%
! TCAAGAACTCCATCTCCTTT+TGG - chr8.3:62090054-62090073 MS.gene57533:CDS 40.0%
! TTGGTAGCAAAAGGAGACAA+AGG + chr8.3:62090264-62090283 None:intergenic 40.0%
!! AATCCTGCTTTGGAAGCTTT+GGG + chr8.3:62090471-62090490 None:intergenic 40.0%
!! GCAAGTGATTTGGTAGCAAA+AGG + chr8.3:62090273-62090292 None:intergenic 40.0%
!! TAATCCTGCTTTGGAAGCTT+TGG + chr8.3:62090472-62090491 None:intergenic 40.0%
AACCATATGGATGACGTCGA+TGG + chr8.3:62090299-62090318 None:intergenic 45.0%
ACTTTACTGGCAACCTCAAC+TGG + chr8.3:62089924-62089943 None:intergenic 45.0%
CGCAAAGTGAGGATCAAAAG+AGG + chr8.3:62089992-62090011 None:intergenic 45.0%
GGTCCAGTGAAACAGAATCA+TGG + chr8.3:62090113-62090132 None:intergenic 45.0%
TACCATCGACGTCATCCATA+TGG - chr8.3:62090294-62090313 MS.gene57533:CDS 45.0%
TATCCCAAAGCTTCCAAAGC+AGG - chr8.3:62090465-62090484 MS.gene57533:CDS 45.0%
TGGCCAAAATCATCTGGAAG+AGG + chr8.3:62090597-62090616 None:intergenic 45.0%
! AACTGATGGTGCTAGTGGAT+TGG - chr8.3:62090812-62090831 MS.gene57533:CDS 45.0%
! AGGATGGATTCCATACGTAG+AGG + chr8.3:62090221-62090240 None:intergenic 45.0%
! CGACGTCATCCATATGGTTT+TGG - chr8.3:62090300-62090319 MS.gene57533:CDS 45.0%
!! GGAAGCTTTGGGATAATCCA+AGG + chr8.3:62090460-62090479 None:intergenic 45.0%
GAGCGAATCCCAAAAGGAGA+TGG + chr8.3:62090066-62090085 None:intergenic 50.0%
! GTTGGAACTGATGGTGCTAG+TGG - chr8.3:62090807-62090826 MS.gene57533:CDS 50.0%
GGTCCACCAGGGAGTGAAAA+CGG + chr8.3:62090921-62090940 None:intergenic 55.0%
! GAGTCTCCGTTTTCACTCCC+TGG - chr8.3:62090912-62090931 MS.gene57533:CDS 55.0%
! TCTCCGTTTTCACTCCCTGG+TGG - chr8.3:62090915-62090934 MS.gene57533:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 62089868 62090944 62089868 ID=MS.gene57533
chr8.3 mRNA 62089868 62090944 62089868 ID=MS.gene57533.t1;Parent=MS.gene57533
chr8.3 exon 62089868 62090944 62089868 ID=MS.gene57533.t1.exon1;Parent=MS.gene57533.t1
chr8.3 CDS 62089868 62090944 62089868 ID=cds.MS.gene57533.t1;Parent=MS.gene57533.t1
Gene Sequence

>MS.gene57533

ATGGCGAAGATGAATGCGACTTACTATCTTCCTGCTGAATTACTCATTCAAATCCAGTTGAGGTTGCCAGTAAAGTCTCTTTTACGTTTCAAATGCATTTGTAAGTCATGGTTTTCTCTTACCTCTTTTGATCCTCACTTTGCGAATTCTCATGTTGATGTTTCCGCGGCAAGAGTTGTGTTAATATCAAGAACTCCATCTCCTTTTGGGATTCGCTCTATAGATTTTGAAACATCCATTAACCATGATTCTGTTTCACTGGACCATACTTTTCTACTTTTCGGACGTTATTCTTTGTATAAAATTAAAGGTTCATGCAGAGGGTTTATATTTTTGGATTGTTCAACAAACCTCTACGTATGGAATCCATCCTCTAAGTTTTACAAAGAAATACCTTTGTCTCCTTTTGCTACCAAATCACTTGCATACCATCGACGTCATCCATATGGTTTTGGTTATGACCGATCAAGAGATGATTACTTGGTGGTTTTATTGTCCTTAGCAAAAACTTCATCACAATTGGAGTTTTTCTCATTGAGAGATAATAAGTGGAATGAAATTGAATGTCCCCAATTCACTTATTTGAATACCTTGGATTATCCCAAAGCTTCCAAAGCAGGATTATTCTTGAATGGGACTATTCATTGGTTGGCTTCTCATTATCATGATATGCGAGTGAAATCTATTGTTGTCTTTGATTTAATGGAAAGGAAACTGCTACATATACCTCTTCCAGATGATTTTGGCCATGATCTTCGGTATTATGATTTGTGGGTATCTGGAGAATTTCTCAGTCTATGGAATAGAAATTTTCATAATTGGACAATTGAAATATGGGTGATGAAGGAATACAAACAACATTCGTCTTGGACTAAGTCTCTTGTAATTTCTAGCCTTCTGTGCTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTGTTGGAACTGATGGTGCTAGTGGATTGGTGAAGTATAATGATAAAGGACAGCAGATAGAGTATCTCGAAATGAATCTGAATACATCTAAAGTGGCCATTTATACAGAGTCTCCGTTTTCACTCCCTGGTGGACCATGA

Protein sequence

>MS.gene57533.t1

MAKMNATYYLPAELLIQIQLRLPVKSLLRFKCICKSWFSLTSFDPHFANSHVDVSAARVVLISRTPSPFGIRSIDFETSINHDSVSLDHTFLLFGRYSLYKIKGSCRGFIFLDCSTNLYVWNPSSKFYKEIPLSPFATKSLAYHRRHPYGFGYDRSRDDYLVVLLSLAKTSSQLEFFSLRDNKWNEIECPQFTYLNTLDYPKASKAGLFLNGTIHWLASHYHDMRVKSIVVFDLMERKLLHIPLPDDFGHDLRYYDLWVSGEFLSLWNRNFHNWTIEIWVMKEYKQHSSWTKSLVISSLLCFSPIYSTKSGDIVGTDGASGLVKYNDKGQQIEYLEMNLNTSKVAIYTESPFSLPGGP