AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060368


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060368.t1 MTR_4g118380 91.098 337 28 1 1 335 1 337 0.0 585
MS.gene060368.t1 MTR_6g060650 75.224 335 74 1 1 335 1 326 3.72e-166 468
MS.gene060368.t1 MTR_3g103020 58.982 334 111 6 7 335 19 331 5.24e-123 358
MS.gene060368.t1 MTR_4g117720 58.333 336 85 5 1 335 44 325 2.19e-120 352
MS.gene060368.t1 MTR_4g118400 57.313 335 61 5 1 335 1 253 2.02e-119 346
MS.gene060368.t1 MTR_3g034180 56.322 348 120 8 1 335 115 443 2.14e-119 353
MS.gene060368.t1 MTR_3g034160 55.848 342 119 7 1 329 1 323 1.20e-115 340
MS.gene060368.t1 MTR_4g109280 55.786 337 121 7 1 335 1 311 2.09e-115 338
MS.gene060368.t1 MTR_3g034130 54.783 345 125 7 3 335 4 329 3.26e-114 336
MS.gene060368.t1 MTR_4g023090 53.571 336 133 7 2 334 10 325 4.83e-111 328
MS.gene060368.t1 MTR_4g117850 56.560 343 109 12 4 335 19 332 1.91e-110 327
MS.gene060368.t1 MTR_4g116330 52.326 344 125 7 2 335 17 331 3.35e-107 318
MS.gene060368.t1 MTR_4g122850 55.692 325 116 11 19 335 12 316 5.98e-106 315
MS.gene060368.t1 MTR_4g109270 54.227 343 123 11 1 335 1 317 9.63e-106 314
MS.gene060368.t1 MTR_4g094365 52.212 339 136 8 1 335 1 317 1.17e-103 309
MS.gene060368.t1 MTR_4g023080 52.212 339 126 11 1 334 1 308 2.12e-101 303
MS.gene060368.t1 MTR_4g117770 53.061 343 130 10 1 335 1 320 4.03e-99 297
MS.gene060368.t1 MTR_4g117810 53.061 343 130 10 1 335 1 320 4.03e-99 297
MS.gene060368.t1 MTR_4g117780 50.877 342 139 10 1 335 1 320 6.35e-96 289
MS.gene060368.t1 MTR_4g021785 50.904 332 129 7 7 334 8 309 1.00e-95 288
MS.gene060368.t1 MTR_5g070080 50.720 347 137 9 7 335 9 339 4.49e-95 288
MS.gene060368.t1 MTR_8g433040 52.059 340 123 10 3 335 13 319 3.35e-94 285
MS.gene060368.t1 MTR_8g032380 52.059 340 123 10 3 335 13 319 3.35e-94 285
MS.gene060368.t1 MTR_5g070130 49.280 347 143 10 1 335 4 329 3.83e-92 280
MS.gene060368.t1 MTR_8g013010 54.577 284 107 3 1 283 47 309 1.82e-91 276
MS.gene060368.t1 MTR_4g023070 47.989 348 134 11 8 334 3 324 4.82e-91 277
MS.gene060368.t1 MTR_4g023380 47.339 357 129 7 2 334 10 331 7.04e-91 276
MS.gene060368.t1 MTR_4g023190 52.083 336 127 11 2 332 4 310 4.20e-88 269
MS.gene060368.t1 MTR_5g097210 50.292 342 134 12 2 335 3 316 1.05e-87 268
MS.gene060368.t1 MTR_4g023120 46.398 347 141 11 8 334 3 324 2.42e-87 267
MS.gene060368.t1 MTR_1g055135 49.112 338 143 11 6 335 11 327 3.85e-87 267
MS.gene060368.t1 MTR_4g023130 46.903 339 103 9 1 334 1 267 4.63e-87 265
MS.gene060368.t1 MTR_8g032390 49.267 341 119 12 3 335 35 329 4.83e-86 264
MS.gene060368.t1 MTR_4g023150 50.149 335 136 10 2 332 4 311 4.16e-85 261
MS.gene060368.t1 MTR_5g070088 46.459 353 159 9 3 338 2 341 1.12e-83 258
MS.gene060368.t1 MTR_4g116330 45.930 344 108 7 2 335 17 292 5.16e-83 255
MS.gene060368.t1 MTR_4g023440 46.707 334 116 7 6 337 16 289 1.59e-81 251
MS.gene060368.t1 MTR_4g117750 50.742 337 132 11 7 335 2 312 3.91e-78 247
MS.gene060368.t1 MTR_4g117750 59.091 88 33 2 250 335 350 436 5.19e-22 97.1
MS.gene060368.t1 MTR_4g023200 47.923 313 130 11 25 332 27 311 6.74e-78 243
MS.gene060368.t1 MTR_4g121580 46.839 348 126 13 1 334 1 303 4.61e-76 239
MS.gene060368.t1 MTR_1g055165 42.216 334 118 11 6 335 8 270 6.25e-68 216
MS.gene060368.t1 MTR_4g117870 46.909 275 90 7 62 335 1 220 1.85e-65 207
MS.gene060368.t1 MTR_1g055195 47.143 280 102 10 68 335 186 431 5.82e-63 208
MS.gene060368.t1 MTR_4g116340 49.372 239 92 4 6 240 34 247 1.10e-61 197
MS.gene060368.t1 MTR_7g079370 42.173 313 147 9 37 335 16 308 2.93e-59 195
MS.gene060368.t1 MTR_4g116320 57.865 178 60 5 162 335 43 209 1.82e-55 182
MS.gene060368.t1 MTR_8g102520 41.667 300 123 11 43 337 24 276 1.05e-54 182
MS.gene060368.t1 MTR_2g048580 39.873 316 140 13 1 306 1 276 3.10e-54 181
MS.gene060368.t1 MTR_4g118370 46.121 232 83 8 111 335 17 213 1.11e-51 172
MS.gene060368.t1 MTR_8g433030 54.497 189 68 7 153 335 120 296 2.85e-51 173
MS.gene060368.t1 MTR_8g433030 52.632 95 38 4 3 95 35 124 4.78e-17 81.3
MS.gene060368.t1 MTR_8g040935 53.179 173 67 4 173 340 1 164 9.75e-50 165
MS.gene060368.t1 MTR_7g079400 43.590 234 114 6 107 335 65 285 2.85e-49 168
MS.gene060368.t1 MTR_7g117720 46.119 219 86 7 1 214 1 192 3.53e-45 155
MS.gene060368.t1 MTR_1g055250 45.327 214 95 8 133 339 27 225 5.71e-45 157
MS.gene060368.t1 MTR_4g117430 54.777 157 50 5 127 282 15 151 4.98e-41 141
MS.gene060368.t1 MTR_1g055175 51.266 158 60 6 184 335 7 153 2.16e-38 135
MS.gene060368.t1 MTR_6g463430 46.927 179 67 5 160 335 2 155 1.21e-37 134
MS.gene060368.t1 MTR_4g117530 39.320 206 80 3 132 335 47 209 7.57e-35 128
MS.gene060368.t1 MTR_4g114700 37.500 232 83 7 108 334 2 176 2.61e-33 124
MS.gene060368.t1 MTR_6g065980 33.442 308 162 12 5 307 13 282 5.34e-33 125
MS.gene060368.t1 MTR_4g109290 44.048 168 51 4 6 171 7 133 6.32e-33 121
MS.gene060368.t1 MTR_5g069120 43.316 187 86 5 18 194 1 177 7.32e-33 120
MS.gene060368.t1 MTR_7g079420 38.428 229 98 8 114 336 905 1096 3.25e-32 127
MS.gene060368.t1 MTR_8g098830 42.138 159 79 4 180 334 29 178 4.46e-31 117
MS.gene060368.t1 MTR_3g007330 31.447 318 172 13 6 312 46 328 5.76e-31 121
MS.gene060368.t1 MTR_5g057710 32.628 331 166 14 8 320 46 337 1.31e-29 117
MS.gene060368.t1 MTR_5g022420 29.167 312 175 13 6 309 25 298 3.91e-29 115
MS.gene060368.t1 MTR_3g006670 31.193 327 159 13 6 307 47 332 1.10e-28 115
MS.gene060368.t1 MTR_5g057790 32.831 332 166 15 8 321 46 338 2.48e-28 114
MS.gene060368.t1 MTR_4g061340 29.091 330 184 12 6 318 24 320 1.03e-27 112
MS.gene060368.t1 MTR_3g007360 30.841 321 177 13 11 317 55 344 1.12e-27 112
MS.gene060368.t1 MTR_3g007410 30.031 323 177 13 11 317 55 344 2.03e-27 111
MS.gene060368.t1 MTR_4g055060 31.464 321 180 12 6 312 28 322 6.72e-27 109
MS.gene060368.t1 MTR_3g013740 29.730 333 193 13 5 319 41 350 1.80e-26 108
MS.gene060368.t1 MTR_2g078900 29.487 312 177 13 6 307 31 309 3.23e-26 107
MS.gene060368.t1 MTR_4g133170 27.941 340 197 13 8 331 4 311 3.61e-26 107
MS.gene060368.t1 MTR_5g057690 31.402 328 166 14 8 321 46 328 7.89e-26 106
MS.gene060368.t1 MTR_5g011200 31.546 317 168 14 8 307 17 301 2.20e-25 105
MS.gene060368.t1 MTR_3g036290 31.790 324 167 16 5 318 19 298 2.24e-25 105
MS.gene060368.t1 MTR_3g083640 29.870 308 180 11 6 307 53 330 2.47e-25 105
MS.gene060368.t1 MTR_3g436150 31.013 316 186 10 6 307 30 327 3.35e-25 105
MS.gene060368.t1 MTR_7g056760 28.532 361 199 15 7 331 22 359 4.70e-25 104
MS.gene060368.t1 MTR_0667s0010 28.940 349 201 14 5 330 3 327 6.58e-25 104
MS.gene060368.t1 MTR_3g009310 30.255 314 186 10 6 312 40 327 8.05e-25 103
MS.gene060368.t1 MTR_1g094210 26.966 356 190 15 2 334 51 359 8.70e-25 103
MS.gene060368.t1 MTR_2g021150 29.480 346 195 18 6 332 12 327 9.05e-25 103
MS.gene060368.t1 MTR_3g036335 29.730 333 189 14 6 324 39 340 1.07e-24 103
MS.gene060368.t1 MTR_6g027910 30.408 319 176 15 11 307 12 306 1.14e-24 103
MS.gene060368.t1 MTR_1g094210 26.966 356 190 15 2 334 51 359 1.21e-24 103
MS.gene060368.t1 MTR_3g006570 29.221 308 187 12 6 307 19 301 1.56e-24 103
MS.gene060368.t1 MTR_3g014540 31.861 317 169 15 6 307 27 311 1.91e-24 102
MS.gene060368.t1 MTR_1g097330 28.213 319 187 11 6 314 14 300 6.46e-24 101
MS.gene060368.t1 MTR_4g030830 25.676 370 210 13 2 331 3 347 6.57e-24 101
MS.gene060368.t1 MTR_2g055970 30.211 331 184 19 5 323 208 503 7.74e-24 102
MS.gene060368.t1 MTR_6g034720 52.679 112 48 3 138 245 53 163 9.92e-24 97.4
MS.gene060368.t1 MTR_4g118360 70.149 67 18 1 269 335 13 77 9.97e-24 94.7
MS.gene060368.t1 MTR_3g030350 29.781 319 190 14 6 319 33 322 1.51e-23 100
MS.gene060368.t1 MTR_0044s0300 30.573 314 172 14 6 307 36 315 1.62e-23 100
MS.gene060368.t1 MTR_4g108820 27.893 337 173 13 6 333 40 315 1.97e-23 99.0
MS.gene060368.t1 MTR_8g467140 30.128 312 178 15 7 307 31 313 2.27e-23 99.0
MS.gene060368.t1 MTR_4g023430 57.955 88 36 1 2 88 35 122 2.59e-23 96.7
MS.gene060368.t1 MTR_3g010870 27.832 309 184 12 6 307 35 311 2.82e-23 99.8
MS.gene060368.t1 MTR_3g010520 28.296 311 167 11 6 307 23 286 2.93e-23 99.4
MS.gene060368.t1 MTR_3g014570 29.394 330 190 13 6 322 27 326 3.16e-23 99.4
MS.gene060368.t1 MTR_3g036430 28.197 305 163 10 6 307 18 269 3.97e-23 98.6
MS.gene060368.t1 MTR_4g122860 38.961 154 55 4 190 336 156 277 3.98e-23 98.6
MS.gene060368.t1 MTR_4g122860 50.000 92 41 3 1 89 60 149 1.35e-13 71.2
MS.gene060368.t1 MTR_5g046300 30.476 315 169 13 6 307 2 279 4.29e-23 98.6
MS.gene060368.t1 MTR_5g046290 30.476 315 169 13 6 307 2 279 4.29e-23 98.6
MS.gene060368.t1 MTR_3g010920 29.316 307 170 10 6 307 42 306 4.50e-23 99.0
MS.gene060368.t1 MTR_3g023930 27.922 308 171 10 6 307 32 294 6.55e-23 98.2
MS.gene060368.t1 MTR_4g013180 26.891 357 209 14 7 331 10 346 1.25e-22 98.6
MS.gene060368.t1 MTR_5g057020 30.723 332 158 14 8 321 46 323 1.54e-22 97.1
MS.gene060368.t1 MTR_3g007270 28.173 323 193 13 6 312 45 344 1.97e-22 97.4
MS.gene060368.t1 MTR_7g407070 30.218 321 188 14 6 307 30 333 3.57e-22 96.7
MS.gene060368.t1 MTR_3g011100 29.483 329 197 14 6 323 233 537 3.71e-22 97.8
MS.gene060368.t1 MTR_3g010590 28.525 305 180 11 6 307 37 306 4.04e-22 96.3
MS.gene060368.t1 MTR_2g024110 26.807 332 203 12 8 325 4 309 4.31e-22 96.3
MS.gene060368.t1 MTR_1g056710 29.795 292 165 11 8 279 34 305 4.76e-22 96.3
MS.gene060368.t1 MTR_3g009240 29.618 314 174 13 6 307 34 312 1.06e-21 95.1
MS.gene060368.t1 MTR_5g007610 29.326 341 183 17 6 322 39 345 1.18e-21 95.1
MS.gene060368.t1 MTR_2g078850 29.450 309 174 12 11 307 33 309 1.47e-21 94.7
MS.gene060368.t1 MTR_0760s0010 30.100 299 169 13 16 308 55 319 2.36e-21 94.4
MS.gene060368.t1 MTR_2g021155 29.167 312 183 12 6 307 34 317 2.85e-21 95.5
MS.gene060368.t1 MTR_2g021155 29.004 231 131 12 108 323 689 901 1.54e-11 65.9
MS.gene060368.t1 MTR_7g077970 28.205 351 196 13 6 320 5 335 3.20e-21 94.4
MS.gene060368.t1 MTR_3g010970 28.239 301 177 10 11 307 51 316 3.45e-21 94.0
MS.gene060368.t1 MTR_4g107820 28.571 329 189 13 8 325 36 329 3.46e-21 93.6
MS.gene060368.t1 MTR_4g107780 28.571 329 189 13 8 325 36 329 3.46e-21 93.6
MS.gene060368.t1 MTR_3g030250 28.247 308 179 10 6 307 35 306 3.64e-21 93.6
MS.gene060368.t1 MTR_7g079640 28.986 345 208 15 2 332 7 328 4.09e-21 93.6
MS.gene060368.t1 MTR_4g107820 28.615 325 194 13 8 325 36 329 4.50e-21 93.6
MS.gene060368.t1 MTR_4g107780 28.615 325 194 13 8 325 36 329 4.59e-21 93.6
MS.gene060368.t1 MTR_2g046830 28.483 323 189 13 5 316 22 313 5.10e-21 93.6
MS.gene060368.t1 MTR_4g031770 26.730 318 183 12 8 309 4 287 5.27e-21 93.2
MS.gene060368.t1 MTR_2g104340 27.371 369 204 14 2 332 8 350 5.65e-21 93.2
MS.gene060368.t1 MTR_4g129190 33.471 242 122 8 8 233 6 224 8.82e-21 92.8
MS.gene060368.t1 MTR_3g024150 29.412 306 176 13 11 307 38 312 2.03e-20 91.7
MS.gene060368.t1 MTR_3g013770 32.188 320 168 16 6 307 31 319 3.33e-20 90.9
MS.gene060368.t1 MTR_3g072470 31.519 349 170 17 11 320 22 340 3.72e-20 91.3
MS.gene060368.t1 MTR_7g078040 29.118 340 196 13 8 312 9 338 3.78e-20 91.3
MS.gene060368.t1 MTR_2g021190 28.261 322 175 11 6 307 19 304 4.03e-20 90.5
MS.gene060368.t1 MTR_5g046260 28.990 307 154 12 6 307 2 249 4.08e-20 89.4
MS.gene060368.t1 MTR_3g083010 27.143 350 215 12 8 330 6 342 4.58e-20 90.9
MS.gene060368.t1 MTR_2g028140 27.642 369 208 17 8 340 5 350 4.97e-20 90.9
MS.gene060368.t1 MTR_2g028160 27.350 351 210 15 8 330 5 338 5.49e-20 90.5
MS.gene060368.t1 MTR_1g088120 28.235 340 188 14 7 312 9 326 6.12e-20 90.5
MS.gene060368.t1 MTR_1g055070 29.963 267 156 10 8 254 49 304 7.31e-20 90.1
MS.gene060368.t1 MTR_7g017130 28.440 327 191 13 8 307 18 328 8.20e-20 89.7
MS.gene060368.t1 MTR_7g017170 28.440 327 191 13 8 307 18 328 9.37e-20 89.7
MS.gene060368.t1 MTR_1g097490 28.344 314 188 10 5 311 46 329 9.78e-20 89.7
MS.gene060368.t1 MTR_2g025420 27.451 357 206 15 8 330 6 343 1.11e-19 89.7
MS.gene060368.t1 MTR_2g046900 25.228 329 200 9 5 316 25 324 1.19e-19 89.4
MS.gene060368.t1 MTR_3g024110 26.266 316 178 10 6 307 99 373 1.51e-19 89.4
MS.gene060368.t1 MTR_1g097560 29.268 328 182 16 5 324 33 318 1.68e-19 89.0
MS.gene060368.t1 MTR_0064s0160 26.647 334 210 14 7 317 41 362 1.89e-19 89.4
MS.gene060368.t1 MTR_6g053240 26.168 321 188 14 6 307 26 316 2.23e-19 88.6
MS.gene060368.t1 MTR_2g046920 27.301 326 189 13 5 316 21 312 2.64e-19 88.2
MS.gene060368.t1 MTR_1g068875 26.409 337 211 12 8 333 4 314 3.24e-19 88.2
MS.gene060368.t1 MTR_3g030330 28.664 307 182 12 6 307 18 292 3.97e-19 87.8
MS.gene060368.t1 MTR_7g078860 25.753 365 218 14 3 331 4 351 4.30e-19 87.8
MS.gene060368.t1 MTR_7g056820 28.329 353 202 15 6 332 5 332 4.94e-19 87.4
MS.gene060368.t1 MTR_3g030240 26.198 313 174 12 6 307 38 304 6.06e-19 87.0
MS.gene060368.t1 MTR_2g426070 27.855 359 191 13 9 330 7 334 8.60e-19 87.0
MS.gene060368.t1 MTR_3g010390 27.778 342 182 15 6 315 31 339 9.13e-19 87.0
MS.gene060368.t1 MTR_6g021880 27.829 327 187 13 19 324 31 329 1.28e-18 86.3
MS.gene060368.t1 MTR_3g006500 28.076 317 186 14 2 307 11 296 1.28e-18 86.3
MS.gene060368.t1 MTR_2g028130 26.781 351 210 14 8 330 5 336 1.91e-18 85.9
MS.gene060368.t1 MTR_7g070440 28.701 331 189 15 7 316 6 310 1.93e-18 85.9
MS.gene060368.t1 MTR_6g004660 30.218 321 177 13 8 307 16 310 2.03e-18 85.9
MS.gene060368.t1 MTR_7g079450 46.154 104 43 3 234 337 1 91 2.80e-18 80.5
MS.gene060368.t1 MTR_6g053260 26.582 316 188 13 6 307 335 620 2.95e-18 86.3
MS.gene060368.t1 MTR_5g057643 32.794 247 123 9 8 237 46 266 3.03e-18 83.6
MS.gene060368.t1 MTR_5g023000 77.083 48 11 0 288 335 5 52 3.06e-18 79.3
MS.gene060368.t1 MTR_8g073550 29.577 213 129 6 6 211 28 226 3.16e-18 82.8
MS.gene060368.t1 MTR_3g006530 28.349 321 177 15 6 307 38 324 4.03e-18 85.1
MS.gene060368.t1 MTR_3g010620 26.829 328 179 12 6 322 34 311 4.06e-18 85.1
MS.gene060368.t1 MTR_3g011060 29.012 324 179 16 6 307 26 320 4.27e-18 84.7
MS.gene060368.t1 MTR_7g056797 31.395 258 148 10 5 242 20 268 4.52e-18 84.7
MS.gene060368.t1 MTR_3g010430 26.398 322 180 10 6 307 34 318 5.01e-18 84.7
MS.gene060368.t1 MTR_3g011020 26.888 331 186 14 6 321 26 315 5.30e-18 84.3
MS.gene060368.t1 MTR_1g068860 26.899 316 195 11 8 312 4 294 6.24e-18 84.3
MS.gene060368.t1 MTR_3g030310 28.391 317 183 15 6 307 19 306 6.46e-18 84.3
MS.gene060368.t1 MTR_2g046800 28.529 340 189 16 3 310 9 326 1.26e-17 83.6
MS.gene060368.t1 MTR_7g066000 24.478 335 213 10 7 319 24 340 1.42e-17 83.6
MS.gene060368.t1 MTR_4g028510 26.284 331 200 12 8 307 16 333 1.47e-17 83.6
MS.gene060368.t1 MTR_0128s0020 29.706 340 190 16 8 323 18 332 1.80e-17 83.2
MS.gene060368.t1 MTR_6g090180 27.011 348 203 10 2 312 41 374 2.10e-17 83.2
MS.gene060368.t1 MTR_2g461450 27.796 313 184 12 8 312 18 296 2.45e-17 82.4
MS.gene060368.t1 MTR_7g077070 26.944 360 206 15 1 321 9 350 2.52e-17 82.8
MS.gene060368.t1 MTR_4g037465 26.761 355 207 13 6 332 19 348 2.54e-17 82.8
MS.gene060368.t1 MTR_3g007430 28.105 306 184 11 11 307 46 324 2.58e-17 82.4
MS.gene060368.t1 MTR_2g031640 24.189 339 213 11 8 330 6 316 3.01e-17 82.4
MS.gene060368.t1 MTR_3g030320 33.166 199 110 10 112 307 45 223 3.40e-17 81.3
MS.gene060368.t1 MTR_1g054725 28.049 328 169 15 7 307 19 306 3.52e-17 82.0
MS.gene060368.t1 MTR_7g052150 28.488 344 188 16 3 320 16 327 3.61e-17 82.0
MS.gene060368.t1 MTR_7g069550 28.610 367 206 18 2 332 8 354 3.82e-17 82.0
MS.gene060368.t1 MTR_2g078870 29.952 207 112 8 106 307 54 232 4.19e-17 81.3
MS.gene060368.t1 MTR_5g009060 29.315 365 174 17 6 322 23 351 4.35e-17 82.0
MS.gene060368.t1 MTR_7g056290 28.775 351 178 16 11 320 25 344 4.79e-17 82.0
MS.gene060368.t1 MTR_7g028660 27.003 337 184 11 7 312 10 315 6.03e-17 81.3
MS.gene060368.t1 MTR_8g464770 27.920 351 208 16 3 332 7 333 6.08e-17 81.3
MS.gene060368.t1 MTR_4g014370 26.190 378 212 16 2 332 5 362 6.34e-17 81.6
MS.gene060368.t1 MTR_0115s0020 25.000 328 201 12 8 307 10 320 7.15e-17 81.3
MS.gene060368.t1 MTR_3g007300 27.900 319 170 13 6 320 47 309 9.31e-17 80.9
MS.gene060368.t1 MTR_4g102410 27.500 280 175 9 2 256 55 331 1.06e-16 81.3
MS.gene060368.t1 MTR_4g013185 27.119 354 186 15 7 312 9 338 1.18e-16 80.9
MS.gene060368.t1 MTR_7g056003 26.829 369 191 15 11 331 18 355 1.32e-16 80.5
MS.gene060368.t1 MTR_7g016930 26.284 331 195 14 2 313 10 310 1.82e-16 79.7
MS.gene060368.t1 MTR_5g043160 28.912 377 190 21 10 330 52 406 1.98e-16 80.5
MS.gene060368.t1 MTR_1g055375 26.625 323 178 15 11 309 7 294 2.28e-16 79.7
MS.gene060368.t1 MTR_7g060940 27.536 345 190 14 1 316 15 328 2.86e-16 79.3
MS.gene060368.t1 MTR_7g056503 27.988 343 191 16 7 320 20 335 3.24e-16 79.3
MS.gene060368.t1 MTR_2g024100 27.434 339 200 15 3 320 6 319 3.40e-16 79.3
MS.gene060368.t1 MTR_1g114700 28.797 316 186 12 6 309 27 315 3.58e-16 79.3
MS.gene060368.t1 MTR_7g057270 26.866 335 194 14 8 312 26 339 3.61e-16 79.3
MS.gene060368.t1 MTR_1g115160 27.010 311 183 14 7 309 21 295 3.68e-16 79.0
MS.gene060368.t1 MTR_2g028110 28.097 331 178 14 8 312 4 300 3.76e-16 79.0
MS.gene060368.t1 MTR_6g048120 27.796 313 195 12 6 307 34 326 3.89e-16 79.3
MS.gene060368.t1 MTR_7g017040 26.062 353 218 12 7 332 15 351 3.98e-16 79.0
MS.gene060368.t1 MTR_7g056390 29.096 354 173 18 11 320 21 340 4.03e-16 79.3
MS.gene060368.t1 MTR_2g047832 25.444 338 200 11 5 316 26 337 4.52e-16 79.0
MS.gene060368.t1 MTR_1g058190 26.562 320 167 11 7 309 34 302 5.71e-16 78.6
MS.gene060368.t1 MTR_6g086825 30.204 245 140 8 7 227 69 306 6.46e-16 79.0
MS.gene060368.t1 MTR_8g062660 27.052 329 180 14 2 305 16 309 6.61e-16 79.0
MS.gene060368.t1 MTR_5g057040 34.463 177 89 5 8 173 46 206 6.71e-16 79.3
MS.gene060368.t1 MTR_2g426020 25.281 356 221 15 8 340 6 339 6.84e-16 78.6
MS.gene060368.t1 MTR_1g007410 25.145 346 210 12 3 317 17 344 7.17e-16 78.6
MS.gene060368.t1 MTR_4g028750 28.235 340 191 16 2 307 9 329 7.20e-16 78.2
MS.gene060368.t1 MTR_2g026010 27.326 344 200 12 8 330 4 318 9.00e-16 78.2
MS.gene060368.t1 MTR_3g024040 28.571 315 175 17 16 320 39 313 9.22e-16 77.8
MS.gene060368.t1 MTR_2g425980 28.531 354 197 17 8 330 5 333 1.07e-15 77.8
MS.gene060368.t1 MTR_2g426060 27.299 348 208 15 8 330 6 333 1.08e-15 77.8
MS.gene060368.t1 MTR_2g021050 27.697 343 188 16 8 330 5 307 1.40e-15 77.4
MS.gene060368.t1 MTR_7g070830 25.526 380 202 14 8 332 21 374 1.52e-15 77.4
MS.gene060368.t1 MTR_7g078840 27.731 357 202 15 7 320 9 352 1.58e-15 77.4
MS.gene060368.t1 MTR_6g013270 27.245 323 183 16 6 309 27 316 2.09e-15 77.0
MS.gene060368.t1 MTR_6g007135 27.302 315 196 10 8 310 26 319 2.53e-15 76.6
MS.gene060368.t1 MTR_4g130330 28.142 366 203 19 3 332 2 343 2.60e-15 76.6
MS.gene060368.t1 MTR_5g069930 25.843 356 205 13 7 331 5 332 2.65e-15 76.6
MS.gene060368.t1 MTR_4g028680 26.703 367 206 18 4 332 12 353 3.49e-15 76.3
MS.gene060368.t1 MTR_5g096630 24.625 333 210 12 8 310 18 339 3.53e-15 76.3
MS.gene060368.t1 MTR_4g070550 25.000 324 202 12 8 307 5 311 3.65e-15 76.3
MS.gene060368.t1 MTR_2g029990 26.144 306 196 11 9 307 52 334 4.60e-15 75.9
MS.gene060368.t1 MTR_5g023570 39.130 115 57 4 7 121 36 137 5.00e-15 71.6
MS.gene060368.t1 MTR_1g112930 27.331 311 182 16 6 306 23 299 5.05e-15 75.9
MS.gene060368.t1 MTR_1g055200 58.209 67 21 2 110 175 4 64 6.05e-15 70.5
MS.gene060368.t1 MTR_5g048160 23.926 326 212 10 8 307 4 319 7.04e-15 75.5
MS.gene060368.t1 MTR_5g069760 26.415 371 177 22 7 331 5 325 9.79e-15 74.7
MS.gene060368.t1 MTR_4g028660 24.925 333 207 13 4 307 12 330 1.10e-14 74.7
MS.gene060368.t1 MTR_4g027450 24.925 333 207 13 4 307 12 330 1.10e-14 74.7
MS.gene060368.t1 MTR_7g079160 27.806 392 194 19 7 331 7 376 1.30e-14 75.1
MS.gene060368.t1 MTR_4g055820 26.176 340 210 12 2 310 8 337 1.39e-14 74.3
MS.gene060368.t1 MTR_7g055930 26.410 390 212 12 1 331 6 379 2.18e-14 73.9
MS.gene060368.t1 MTR_7g077990 26.586 331 193 13 2 307 7 312 2.31e-14 73.9
MS.gene060368.t1 MTR_2g021800 24.219 384 214 15 3 332 11 371 2.36e-14 73.9
MS.gene060368.t1 MTR_2g021210 25.806 310 195 13 2 307 78 356 2.45e-14 73.9
MS.gene060368.t1 MTR_5g068040 25.610 328 189 9 5 312 12 304 3.34e-14 73.2
MS.gene060368.t1 MTR_0242s0060 27.027 333 195 15 7 309 8 322 4.13e-14 73.2
MS.gene060368.t1 MTR_0242s0040 27.027 333 195 15 7 309 8 322 4.13e-14 73.2
MS.gene060368.t1 MTR_5g008530 64.286 56 19 1 8 63 18 72 4.28e-14 67.0
MS.gene060368.t1 MTR_2g022000 23.797 374 227 13 3 332 11 370 4.43e-14 73.2
MS.gene060368.t1 MTR_2g021252 24.503 302 188 9 11 307 50 316 5.64e-14 72.8
MS.gene060368.t1 MTR_0649s0020 28.571 350 182 19 8 321 11 328 5.96e-14 72.4
MS.gene060368.t1 MTR_8g063440 25.745 369 198 14 2 332 6 336 6.05e-14 72.4
MS.gene060368.t1 MTR_3g009290 30.508 236 117 12 6 227 33 235 6.26e-14 71.2
MS.gene060368.t1 MTR_3g010870 27.197 239 146 10 6 238 35 251 6.29e-14 72.0
MS.gene060368.t1 MTR_8g099460 27.134 328 188 12 8 312 5 304 6.54e-14 72.4
MS.gene060368.t1 MTR_1g115185 26.183 317 192 14 6 309 37 324 6.56e-14 72.4
MS.gene060368.t1 MTR_2g426090 24.128 344 216 10 11 330 9 331 7.40e-14 72.4
MS.gene060368.t1 MTR_3g058440 30.522 249 141 11 8 242 35 265 7.82e-14 71.6
MS.gene060368.t1 MTR_0128s0070 27.545 334 181 15 8 312 22 323 8.53e-14 72.0
MS.gene060368.t1 MTR_7g055870 26.425 386 217 13 1 331 6 379 8.64e-14 72.4
MS.gene060368.t1 MTR_7g060960 27.326 344 157 16 8 323 32 310 1.01e-13 71.6
MS.gene060368.t1 MTR_3g023940 26.518 313 191 11 6 307 32 316 1.03e-13 72.0
MS.gene060368.t1 MTR_4g129160 27.540 374 202 18 5 330 4 356 1.07e-13 71.6
MS.gene060368.t1 MTR_7g013590 29.573 328 184 15 11 322 39 335 1.13e-13 71.6
MS.gene060368.t1 MTR_2g437110 26.761 355 200 16 8 331 22 347 1.39e-13 72.0
MS.gene060368.t1 MTR_8g039500 27.326 344 218 14 2 332 6 330 1.56e-13 70.9
MS.gene060368.t1 MTR_2g021950 25.208 361 204 16 11 332 19 352 1.73e-13 71.2
MS.gene060368.t1 MTR_0054s0090 24.556 338 202 12 7 307 16 337 2.21e-13 70.9
MS.gene060368.t1 MTR_6g027890 29.000 200 106 8 128 307 73 256 2.63e-13 70.1
MS.gene060368.t1 MTR_7g050520 26.935 323 201 11 7 316 21 321 2.99e-13 70.5
MS.gene060368.t1 MTR_7g052670 25.205 365 228 12 7 331 20 379 3.03e-13 70.9
MS.gene060368.t1 MTR_7g067680 26.688 311 173 14 6 307 47 311 3.40e-13 70.5
MS.gene060368.t1 MTR_4g030980 25.344 363 194 14 8 314 15 356 3.44e-13 70.5
MS.gene060368.t1 MTR_1g037540 25.683 366 219 14 5 332 2 352 4.04e-13 70.1
MS.gene060368.t1 MTR_7g007300 26.045 311 184 13 8 309 103 376 4.40e-13 70.1
MS.gene060368.t1 MTR_7g055987 27.874 348 189 17 11 331 23 335 4.64e-13 69.7
MS.gene060368.t1 MTR_7g061050 27.353 340 190 14 7 320 12 320 5.50e-13 69.7
MS.gene060368.t1 MTR_6g048140 27.358 318 184 15 6 307 37 323 5.86e-13 69.7
MS.gene060368.t1 MTR_3g464500 25.613 367 202 16 4 331 23 357 7.08e-13 69.3
MS.gene060368.t1 MTR_4g013175 25.974 385 201 16 7 331 9 369 7.38e-13 69.3
MS.gene060368.t1 MTR_6g017280 24.786 351 220 11 8 331 9 342 7.78e-13 69.3
MS.gene060368.t1 MTR_3g058470 26.837 313 170 12 6 307 35 299 7.80e-13 69.3
MS.gene060368.t1 MTR_4g008790 27.714 350 182 15 7 312 38 360 8.05e-13 69.3
MS.gene060368.t1 MTR_7g091630 26.765 340 189 17 7 312 31 344 9.25e-13 69.3
MS.gene060368.t1 MTR_5g096910 24.363 353 229 13 1 332 10 345 9.52e-13 68.9
MS.gene060368.t1 MTR_3g096250 25.902 305 161 9 6 307 45 287 9.85e-13 68.6
MS.gene060368.t1 MTR_0464s0020 27.966 354 184 16 11 320 26 352 1.02e-12 68.9
MS.gene060368.t1 MTR_2g047200 27.778 360 175 17 2 316 11 330 1.05e-12 68.9
MS.gene060368.t1 MTR_5g059430 25.397 378 218 17 1 332 19 378 1.09e-12 68.9
MS.gene060368.t1 MTR_3g437520 26.554 354 192 14 11 320 26 355 1.17e-12 68.9
MS.gene060368.t1 MTR_7g061060 27.108 332 188 14 7 312 12 315 1.28e-12 68.6
MS.gene060368.t1 MTR_7g091640 27.463 335 189 18 7 312 34 343 1.37e-12 68.6
MS.gene060368.t1 MTR_5g037680 24.317 366 212 13 1 332 1 335 1.41e-12 68.6
MS.gene060368.t1 MTR_5g072060 27.273 341 214 14 7 332 5 326 1.76e-12 68.6
MS.gene060368.t1 MTR_4g019990 23.729 354 205 12 5 324 3 325 2.01e-12 68.2
MS.gene060368.t1 MTR_7g066850 27.542 236 139 7 8 232 23 237 2.03e-12 68.2
MS.gene060368.t1 MTR_4g080200 27.132 258 151 10 8 253 3 235 2.24e-12 67.8
MS.gene060368.t1 MTR_5g097680 24.722 360 216 14 1 310 10 364 2.47e-12 67.8
MS.gene060368.t1 MTR_2g043400 27.811 338 177 14 11 312 26 332 2.59e-12 67.8
MS.gene060368.t1 MTR_2g038680 26.578 301 167 12 3 259 11 301 3.03e-12 67.4
MS.gene060368.t1 MTR_1g061330 24.159 327 206 12 8 320 4 302 3.27e-12 67.4
MS.gene060368.t1 MTR_7g055977 27.654 358 199 15 7 331 6 336 3.57e-12 67.0
MS.gene060368.t1 MTR_1g071010 26.437 261 148 9 4 242 11 249 4.34e-12 67.0
MS.gene060368.t1 MTR_4g030090 26.935 323 190 15 9 307 15 315 4.83e-12 67.0
MS.gene060368.t1 MTR_7g061010 27.300 337 181 15 8 316 22 322 5.57e-12 66.6
MS.gene060368.t1 MTR_7g066840 26.705 352 207 15 8 331 23 351 6.06e-12 66.6
MS.gene060368.t1 MTR_6g461660 25.148 338 213 12 2 312 13 337 7.61e-12 66.2
MS.gene060368.t1 MTR_6g034830 33.600 125 62 2 3 127 15 118 1.19e-11 61.6
MS.gene060368.t1 MTR_6g055210 27.596 337 195 17 6 314 20 335 1.22e-11 65.9
MS.gene060368.t1 MTR_7g061090 26.488 336 197 12 7 312 21 336 1.27e-11 65.5
MS.gene060368.t1 MTR_3g096280 27.301 326 167 16 14 323 11 282 1.29e-11 65.5
MS.gene060368.t1 MTR_8g066440 26.549 339 200 15 4 312 19 338 1.62e-11 65.5
MS.gene060368.t1 MTR_3g083660 31.875 160 88 6 148 307 68 206 1.75e-11 64.3
MS.gene060368.t1 MTR_4g030760 24.601 313 199 14 2 307 67 349 1.76e-11 65.1
MS.gene060368.t1 MTR_5g096900 28.520 277 159 14 5 256 9 271 1.85e-11 64.7
MS.gene060368.t1 MTR_5g069390 25.956 366 223 18 1 332 19 370 2.19e-11 65.1
MS.gene060368.t1 MTR_5g097820 27.344 256 165 9 3 241 18 269 2.44e-11 63.9
MS.gene060368.t1 MTR_5g056990 30.811 185 98 9 143 320 21 182 2.71e-11 63.2
MS.gene060368.t1 MTR_5g097350 25.797 345 199 17 17 332 25 341 2.95e-11 64.3
MS.gene060368.t1 MTR_7g050480 25.982 331 206 12 1 316 15 321 3.26e-11 64.3
MS.gene060368.t1 MTR_7g066030 26.012 346 198 16 1 312 14 335 3.67e-11 64.3
MS.gene060368.t1 MTR_8g041270 25.272 368 222 13 2 332 9 360 4.99e-11 63.9
MS.gene060368.t1 MTR_2g025960 26.531 245 139 13 113 330 6 236 5.99e-11 63.2
MS.gene060368.t1 MTR_1g113900 29.952 207 110 8 128 327 13 191 6.01e-11 62.4
MS.gene060368.t1 MTR_3g011650 30.493 223 135 10 6 226 77 281 7.14e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060368.t1 AT3G06240 26.902 368 211 15 2 331 27 374 5.90e-21 93.6
MS.gene060368.t1 AT3G23880 28.923 325 176 13 5 309 10 299 7.29e-20 89.7
MS.gene060368.t1 AT5G49610 26.254 339 202 12 3 327 4 308 6.86e-18 84.0
MS.gene060368.t1 AT5G62510 25.938 320 195 8 5 310 41 332 7.27e-18 84.3
MS.gene060368.t1 AT2G40925 24.375 320 198 13 8 310 27 319 1.73e-17 83.2
MS.gene060368.t1 AT1G30790 30.451 266 154 10 7 256 8 258 1.56e-16 80.5
MS.gene060368.t1 AT4G12560 26.879 346 201 15 8 328 4 322 3.49e-16 79.3
MS.gene060368.t1 AT4G12560 26.879 346 201 15 8 328 4 322 3.49e-16 79.3
MS.gene060368.t1 AT4G12560 26.879 346 201 15 8 328 4 322 3.49e-16 79.3
MS.gene060368.t1 AT3G52320 24.762 315 206 11 6 315 25 313 4.70e-16 79.0
MS.gene060368.t1 AT2G16810 28.125 256 160 10 7 255 40 278 8.55e-15 74.3
MS.gene060368.t1 AT1G50870 27.703 296 188 13 9 297 32 308 1.59e-14 74.3
MS.gene060368.t1 AT3G10240 27.481 262 143 10 8 253 27 257 1.91e-14 73.9
MS.gene060368.t1 AT3G16210 27.778 252 148 12 5 253 2 222 3.76e-14 73.2
MS.gene060368.t1 AT5G42430 26.449 276 147 10 2 257 4 243 5.78e-14 72.8
MS.gene060368.t1 AT1G12870 25.731 342 191 19 5 320 30 334 5.86e-14 72.8
MS.gene060368.t1 AT1G47790 23.529 306 203 9 1 303 18 295 1.87e-13 71.2
MS.gene060368.t1 AT4G19940 25.904 332 189 14 6 312 33 332 2.87e-13 70.9
MS.gene060368.t1 AT3G21120 22.745 255 181 7 7 256 2 245 4.04e-13 70.1
MS.gene060368.t1 AT2G40910 24.484 339 193 15 2 312 63 366 2.14e-12 68.2
MS.gene060368.t1 AT2G40910 24.484 339 193 15 2 312 56 359 2.19e-12 68.2
MS.gene060368.t1 AT4G21240 24.918 305 192 13 8 299 36 316 8.81e-12 66.2
MS.gene060368.t1 AT2G40920 25.786 318 201 14 11 312 57 355 9.49e-12 66.2
MS.gene060368.t1 AT4G19930 24.928 345 221 13 6 332 41 365 1.18e-11 65.9
MS.gene060368.t1 AT3G47150 55.000 60 27 0 7 66 11 70 1.21e-11 65.5
MS.gene060368.t1 AT2G40920 26.198 313 196 14 16 312 3 296 2.35e-11 64.7
MS.gene060368.t1 AT5G52610 28.125 224 127 9 8 227 2 195 7.00e-11 63.2
MS.gene060368.t1 AT3G16590 23.605 233 148 8 8 231 5 216 7.12e-11 63.2

Find 66 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTACATCTATATGGTTT+TGG 0.194131 8.4:+12982223 MS.gene060368:CDS
CAAATACCTTTGTCTCCTTA+TGG 0.237521 8.4:+12982178 MS.gene060368:CDS
GATTGTGATTTGTGGGTATT+TGG 0.250931 8.4:+12982577 MS.gene060368:CDS
AGGATGATATAGTTGAAATA+TGG 0.254965 8.4:+12982626 MS.gene060368:CDS
ATGGTAGGGTCGCTCTTTAA+TGG 0.257647 8.4:+12982406 MS.gene060368:CDS
TGGTAGGGTCGCTCTTTAAT+GGG 0.266688 8.4:+12982407 MS.gene060368:CDS
TCTGATATGAACAAAATTCT+AGG 0.268274 8.4:-12981935 None:intergenic
CCAAATGCAATGAAATATTA+TGG 0.272869 8.4:-12982303 None:intergenic
AATCATTTCTTACATCTATA+TGG 0.276051 8.4:+12982217 MS.gene060368:CDS
TAATCAGAGAAGTTTATATA+AGG 0.294260 8.4:-12982379 None:intergenic
CCATAATATTTCATTGCATT+TGG 0.299463 8.4:+12982303 MS.gene060368:CDS
CCGGCAACCTCAGCAGAATT+AGG 0.311199 8.4:-12981808 None:intergenic
TCTTTAATGGGGTTATTCAT+TGG 0.334633 8.4:+12982419 MS.gene060368:CDS
TCCGTCAACAGATGATTATT+TGG 0.347061 8.4:+12982252 MS.gene060368:CDS
TTGGTGAGTTTCTCAGTGTA+TGG 0.351491 8.4:+12982596 MS.gene060368:CDS
CCTAATTCTGCTGAGGTTGC+CGG 0.354385 8.4:+12981808 MS.gene060368:CDS
GAAATGATTGACATGTAAAT+AGG 0.357605 8.4:-12982203 None:intergenic
TCAAGTGTGTTTGTAAGTTA+TGG 0.358196 8.4:+12981849 MS.gene060368:CDS
TAATATCCACAATGGGGATA+AGG 0.418819 8.4:-12982058 None:intergenic
TAATGGGGTTATTCATTGGT+TGG 0.421138 8.4:+12982423 MS.gene060368:CDS
AATCAGAGAAGTTTATATAA+GGG 0.442633 8.4:-12982378 None:intergenic
CAAAATGTGAATTTGCAAAG+TGG 0.461047 8.4:-12981892 None:intergenic
AAAATGTGAATTTGCAAAGT+GGG 0.466025 8.4:-12981891 None:intergenic
AAACTAAATGTTCTTGTAGA+GGG 0.477018 8.4:+12982092 MS.gene060368:CDS
TTTCCTTTCAATTAAATCAA+AGG 0.478785 8.4:-12982482 None:intergenic
GGATGATATAGTTGAAATAT+GGG 0.480581 8.4:+12982627 MS.gene060368:CDS
TCTGCTGAGGTTGCCGGTGA+TGG 0.481191 8.4:+12981814 MS.gene060368:CDS
TACTGGAACTGTGGTGAAGT+TGG 0.483505 8.4:+12982762 MS.gene060368:CDS
CCACAATGGGGATAAGGATC+AGG 0.488936 8.4:-12982052 None:intergenic
TAATGCATGGAATGAAATTG+AGG 0.501607 8.4:+12982345 MS.gene060368:CDS
CAAACTAAATGTTCTTGTAG+AGG 0.505095 8.4:+12982091 MS.gene060368:CDS
TAGAAGTATAATAATCGCTA+AGG 0.508420 8.4:-12981997 None:intergenic
GTCAACAGATGATTATTTGG+TGG 0.508547 8.4:+12982255 MS.gene060368:CDS
TTCTCTGATTATTCCATGGT+AGG 0.509043 8.4:+12982391 MS.gene060368:CDS
TTGCCTTTGATTTAATTGAA+AGG 0.515684 8.4:+12982479 MS.gene060368:CDS
ATCAAGTCATGAGGCAGATA+CGG 0.519786 8.4:-12981782 None:intergenic
TCTCTGATTATTCCATGGTA+GGG 0.522842 8.4:+12982392 MS.gene060368:CDS
AACCTACAGATTGTGATTTG+TGG 0.524422 8.4:+12982569 MS.gene060368:CDS
ACCAAATAATCATCTGTTGA+CGG 0.525314 8.4:-12982253 None:intergenic
ACCTACAGATTGTGATTTGT+GGG 0.529972 8.4:+12982570 MS.gene060368:CDS
AAACTTCTCTGATTATTCCA+TGG 0.542192 8.4:+12982387 MS.gene060368:CDS
ACATGTAAATAGGAACCATA+AGG 0.543522 8.4:-12982193 None:intergenic
TATTTGTTTGTGAACTCTAG+TGG 0.552733 8.4:-12982161 None:intergenic
TCTCAGTGTATGGACTAAGC+AGG 0.562084 8.4:+12982606 MS.gene060368:CDS
TCTCATTGAGAGATAATGCA+TGG 0.569455 8.4:+12982332 MS.gene060368:CDS
GACGTGGACGCACAAAATCA+AGG 0.573797 8.4:-12982030 None:intergenic
AATGCATGGAATGAAATTGA+GGG 0.578899 8.4:+12982346 MS.gene060368:CDS
ATTAAAGAGCGACCCTACCA+TGG 0.581861 8.4:-12982404 None:intergenic
AGTACCAAGTGCATTCGTCA+TGG 0.586111 8.4:+12982659 MS.gene060368:CDS
AGAAGTATAATAATCGCTAA+GGG 0.590897 8.4:-12981996 None:intergenic
TGATCATCCTAATTCTGCTG+AGG 0.597195 8.4:+12981801 MS.gene060368:CDS
GAACTGTGGTGAAGTTGGAT+TGG 0.599614 8.4:+12982767 MS.gene060368:CDS
CCTGATCCTTATCCCCATTG+TGG 0.604132 8.4:+12982052 MS.gene060368:CDS
TAGGAACCATAAGGAGACAA+AGG 0.610034 8.4:-12982184 None:intergenic
TGTTTGTGAACTCTAGTGGA+TGG 0.611408 8.4:-12982157 None:intergenic
GGTAGGGTCGCTCTTTAATG+GGG 0.611790 8.4:+12982408 MS.gene060368:CDS
TAGTCCATGACGAATGCACT+TGG 0.621108 8.4:-12982663 None:intergenic
GGTTCATGTTCAAAATCACC+TGG 0.631631 8.4:-12982550 None:intergenic
ATTGGAGCGAAGTAATGAGT+GGG 0.631785 8.4:-12982715 None:intergenic
AAACGTAAAAGATCCATCAC+CGG 0.635624 8.4:-12981827 None:intergenic
TATTGGAGCGAAGTAATGAG+TGG 0.644959 8.4:-12982716 None:intergenic
TGGGGATAAGGATCAGGACG+TGG 0.651270 8.4:-12982046 None:intergenic
AATTCTAGGACTGTGTGCCA+CGG 0.652869 8.4:-12981921 None:intergenic
TGGTGATATTACTGGAACTG+TGG 0.653934 8.4:+12982753 MS.gene060368:CDS
ACCCACAAATCACAATCTGT+AGG 0.659019 8.4:-12982571 None:intergenic
ATTAGGATGATCAAGTCATG+AGG 0.680661 8.4:-12981791 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATAATATCCACAAT+GGG - chr8.4:12982068-12982087 None:intergenic 15.0%
!! TATAAAAATAATATCCACAA+TGG - chr8.4:12982069-12982088 None:intergenic 15.0%
!! AATCAGAGAAGTTTATATAA+GGG - chr8.4:12982381-12982400 None:intergenic 20.0%
!! AATCATTTCTTACATCTATA+TGG + chr8.4:12982217-12982236 MS.gene060368:CDS 20.0%
!! TAAAAATAATATCCACAATG+GGG - chr8.4:12982067-12982086 None:intergenic 20.0%
!! TAATCAGAGAAGTTTATATA+AGG - chr8.4:12982382-12982401 None:intergenic 20.0%
!! TTTCCTTTCAATTAAATCAA+AGG - chr8.4:12982485-12982504 None:intergenic 20.0%
! AAAATGTGAATTTGCAAAGT+GGG - chr8.4:12981894-12981913 None:intergenic 25.0%
! AAACTAAATGTTCTTGTAGA+GGG + chr8.4:12982092-12982111 MS.gene060368:CDS 25.0%
! AGGATGATATAGTTGAAATA+TGG + chr8.4:12982626-12982645 MS.gene060368:CDS 25.0%
! CCAAATGCAATGAAATATTA+TGG - chr8.4:12982306-12982325 None:intergenic 25.0%
! CCATAATATTTCATTGCATT+TGG + chr8.4:12982303-12982322 MS.gene060368:CDS 25.0%
! GAAATGATTGACATGTAAAT+AGG - chr8.4:12982206-12982225 None:intergenic 25.0%
! GGATGATATAGTTGAAATAT+GGG + chr8.4:12982627-12982646 MS.gene060368:CDS 25.0%
! TCTGATATGAACAAAATTCT+AGG - chr8.4:12981938-12981957 None:intergenic 25.0%
!! AGAAGTATAATAATCGCTAA+GGG - chr8.4:12981999-12982018 None:intergenic 25.0%
!! TAGAAGTATAATAATCGCTA+AGG - chr8.4:12982000-12982019 None:intergenic 25.0%
!! TCTTACATCTATATGGTTTT+GGG + chr8.4:12982224-12982243 MS.gene060368:CDS 25.0%
!! TTCTTACATCTATATGGTTT+TGG + chr8.4:12982223-12982242 MS.gene060368:CDS 25.0%
!! TTGCCTTTGATTTAATTGAA+AGG + chr8.4:12982479-12982498 MS.gene060368:CDS 25.0%
AAACTTCTCTGATTATTCCA+TGG + chr8.4:12982387-12982406 MS.gene060368:CDS 30.0%
AATGCATGGAATGAAATTGA+GGG + chr8.4:12982346-12982365 MS.gene060368:CDS 30.0%
ACAAAAAGTGGTGATATTAC+TGG + chr8.4:12982745-12982764 MS.gene060368:CDS 30.0%
ACATGTAAATAGGAACCATA+AGG - chr8.4:12982196-12982215 None:intergenic 30.0%
ACCAAATAATCATCTGTTGA+CGG - chr8.4:12982256-12982275 None:intergenic 30.0%
CAAAATGTGAATTTGCAAAG+TGG - chr8.4:12981895-12981914 None:intergenic 30.0%
CAAACTAAATGTTCTTGTAG+AGG + chr8.4:12982091-12982110 MS.gene060368:CDS 30.0%
CCAATATGTAGTACAAAAAG+TGG + chr8.4:12982733-12982752 MS.gene060368:CDS 30.0%
TAATGCATGGAATGAAATTG+AGG + chr8.4:12982345-12982364 MS.gene060368:CDS 30.0%
TATTTGTTTGTGAACTCTAG+TGG - chr8.4:12982164-12982183 None:intergenic 30.0%
TCAAGTGTGTTTGTAAGTTA+TGG + chr8.4:12981849-12981868 MS.gene060368:CDS 30.0%
TCTTTAATGGGGTTATTCAT+TGG + chr8.4:12982419-12982438 MS.gene060368:CDS 30.0%
!!! CCACTTTTTGTACTACATAT+TGG - chr8.4:12982736-12982755 None:intergenic 30.0%
!!! TTCACATTTTGAAATTACCG+TGG + chr8.4:12981904-12981923 MS.gene060368:CDS 30.0%
AAACGTAAAAGATCCATCAC+CGG - chr8.4:12981830-12981849 None:intergenic 35.0%
AACCTACAGATTGTGATTTG+TGG + chr8.4:12982569-12982588 MS.gene060368:CDS 35.0%
ATTAGGATGATCAAGTCATG+AGG - chr8.4:12981794-12981813 None:intergenic 35.0%
CAAATACCTTTGTCTCCTTA+TGG + chr8.4:12982178-12982197 MS.gene060368:CDS 35.0%
GTCAACAGATGATTATTTGG+TGG + chr8.4:12982255-12982274 MS.gene060368:CDS 35.0%
GTGCTGCAAAAACTTATCTA+TGG + chr8.4:12982131-12982150 MS.gene060368:CDS 35.0%
TAATATCCACAATGGGGATA+AGG - chr8.4:12982061-12982080 None:intergenic 35.0%
TAATGGGGTTATTCATTGGT+TGG + chr8.4:12982423-12982442 MS.gene060368:CDS 35.0%
TCCGTCAACAGATGATTATT+TGG + chr8.4:12982252-12982271 MS.gene060368:CDS 35.0%
TCTCATTGAGAGATAATGCA+TGG + chr8.4:12982332-12982351 MS.gene060368:CDS 35.0%
TCTCTGATTATTCCATGGTA+GGG + chr8.4:12982392-12982411 MS.gene060368:CDS 35.0%
TTCTCTGATTATTCCATGGT+AGG + chr8.4:12982391-12982410 MS.gene060368:CDS 35.0%
! ACCTACAGATTGTGATTTGT+GGG + chr8.4:12982570-12982589 MS.gene060368:CDS 35.0%
! GATTGTGATTTGTGGGTATT+TGG + chr8.4:12982577-12982596 MS.gene060368:CDS 35.0%
!!! CTTTGCCAGATGATCTTTTT+TGG + chr8.4:12982518-12982537 MS.gene060368:CDS 35.0%
ACCCACAAATCACAATCTGT+AGG - chr8.4:12982574-12982593 None:intergenic 40.0%
ATCAAGTCATGAGGCAGATA+CGG - chr8.4:12981785-12981804 None:intergenic 40.0%
ATTGGAGCGAAGTAATGAGT+GGG - chr8.4:12982718-12982737 None:intergenic 40.0%
CCTCTCCAAAAAAGATCATC+TGG - chr8.4:12982526-12982545 None:intergenic 40.0%
GGTTCATGTTCAAAATCACC+TGG - chr8.4:12982553-12982572 None:intergenic 40.0%
TAGGAACCATAAGGAGACAA+AGG - chr8.4:12982187-12982206 None:intergenic 40.0%
TATTGGAGCGAAGTAATGAG+TGG - chr8.4:12982719-12982738 None:intergenic 40.0%
TGATCATCCTAATTCTGCTG+AGG + chr8.4:12981801-12981820 MS.gene060368:CDS 40.0%
TGGTGATATTACTGGAACTG+TGG + chr8.4:12982753-12982772 MS.gene060368:CDS 40.0%
TGTTTGTGAACTCTAGTGGA+TGG - chr8.4:12982160-12982179 None:intergenic 40.0%
TTGGTGAGTTTCTCAGTGTA+TGG + chr8.4:12982596-12982615 MS.gene060368:CDS 40.0%
!!! CCAGATGATCTTTTTTGGAG+AGG + chr8.4:12982523-12982542 MS.gene060368:CDS 40.0%
!!! CTTTTTTGGAGAGGTTTACC+AGG + chr8.4:12982532-12982551 MS.gene060368:CDS 40.0%
AGTACCAAGTGCATTCGTCA+TGG + chr8.4:12982659-12982678 MS.gene060368:CDS 45.0%
ATGGTAGGGTCGCTCTTTAA+TGG + chr8.4:12982406-12982425 MS.gene060368:CDS 45.0%
ATTAAAGAGCGACCCTACCA+TGG - chr8.4:12982407-12982426 None:intergenic 45.0%
GAACTGTGGTGAAGTTGGAT+TGG + chr8.4:12982767-12982786 MS.gene060368:CDS 45.0%
TACTGGAACTGTGGTGAAGT+TGG + chr8.4:12982762-12982781 MS.gene060368:CDS 45.0%
TAGTCCATGACGAATGCACT+TGG - chr8.4:12982666-12982685 None:intergenic 45.0%
TGGTAGGGTCGCTCTTTAAT+GGG + chr8.4:12982407-12982426 MS.gene060368:CDS 45.0%
! TCTCAGTGTATGGACTAAGC+AGG + chr8.4:12982606-12982625 MS.gene060368:CDS 45.0%
!! AATTCTAGGACTGTGTGCCA+CGG - chr8.4:12981924-12981943 None:intergenic 45.0%
CCACAATGGGGATAAGGATC+AGG - chr8.4:12982055-12982074 None:intergenic 50.0%
CCTAATTCTGCTGAGGTTGC+CGG + chr8.4:12981808-12981827 MS.gene060368:CDS 50.0%
CCTGATCCTTATCCCCATTG+TGG + chr8.4:12982052-12982071 MS.gene060368:CDS 50.0%
GACGTGGACGCACAAAATCA+AGG - chr8.4:12982033-12982052 None:intergenic 50.0%
GGTAGGGTCGCTCTTTAATG+GGG + chr8.4:12982408-12982427 MS.gene060368:CDS 50.0%
CCGGCAACCTCAGCAGAATT+AGG - chr8.4:12981811-12981830 None:intergenic 55.0%
TGGGGATAAGGATCAGGACG+TGG - chr8.4:12982049-12982068 None:intergenic 55.0%
TCTGCTGAGGTTGCCGGTGA+TGG + chr8.4:12981814-12981833 MS.gene060368:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 12981767 12982792 12981767 ID=MS.gene060368
chr8.4 mRNA 12981767 12982792 12981767 ID=MS.gene060368.t1;Parent=MS.gene060368
chr8.4 exon 12981767 12982792 12981767 ID=MS.gene060368.t1.exon1;Parent=MS.gene060368.t1
chr8.4 CDS 12981767 12982792 12981767 ID=cds.MS.gene060368.t1;Parent=MS.gene060368.t1
Gene Sequence

>MS.gene060368

ATGGAAAAGAATTCACCGTATCTGCCTCATGACTTGATCATCCTAATTCTGCTGAGGTTGCCGGTGATGGATCTTTTACGTTTCAAGTGTGTTTGTAAGTTATGGTTTTCTCTTATCTCTGAAACCCACTTTGCAAATTCACATTTTGAAATTACCGTGGCACACAGTCCTAGAATTTTGTTCATATCAGATCGAGATCTTGAAACTCGATCGATTGATTTTGAAGCATCCCTTAGCGATTATTATACTTCTACTTCACTAAACCTTGATTTTGTGCGTCCACGTCCTGATCCTTATCCCCATTGTGGATATTATTTTTATATTCAAACTAAATGTTCTTGTAGAGGGTTTATATTTTTGCATCGTGCTGCAAAAACTTATCTATGGAATCCATCCACTAGAGTTCACAAACAAATACCTTTGTCTCCTTATGGTTCCTATTTACATGTCAATCATTTCTTACATCTATATGGTTTTGGGTATGATCCGTCAACAGATGATTATTTGGTGGTTTTGATGTCATTTCACAATGTCTTCCATAATATTTCATTGCATTTGGAGTTTTTCTCATTGAGAGATAATGCATGGAATGAAATTGAGGGTACTAACTTCCCTTATATAAACTTCTCTGATTATTCCATGGTAGGGTCGCTCTTTAATGGGGTTATTCATTGGTTGGCTTTTCATCTTGATTTATCAATGAATGTTATTGTTGCCTTTGATTTAATTGAAAGGAAACTTTTAGACATATCTTTGCCAGATGATCTTTTTTGGAGAGGTTTACCAGGTGATTTTGAACATGAACCTACAGATTGTGATTTGTGGGTATTTGGTGAGTTTCTCAGTGTATGGACTAAGCAGGATGATATAGTTGAAATATGGGTGATGAAAGAGTACCAAGTGCATTCGTCATGGACTAAGACTCTTGTTTTTTCAATTGATGTCATTCCCACTCATTACTTCGCTCCAATATGTAGTACAAAAAGTGGTGATATTACTGGAACTGTGGTGAAGTTGGATTGGTGA

Protein sequence

>MS.gene060368.t1

MEKNSPYLPHDLIILILLRLPVMDLLRFKCVCKLWFSLISETHFANSHFEITVAHSPRILFISDRDLETRSIDFEASLSDYYTSTSLNLDFVRPRPDPYPHCGYYFYIQTKCSCRGFIFLHRAAKTYLWNPSTRVHKQIPLSPYGSYLHVNHFLHLYGFGYDPSTDDYLVVLMSFHNVFHNISLHLEFFSLRDNAWNEIEGTNFPYINFSDYSMVGSLFNGVIHWLAFHLDLSMNVIVAFDLIERKLLDISLPDDLFWRGLPGDFEHEPTDCDLWVFGEFLSVWTKQDDIVEIWVMKEYQVHSSWTKTLVFSIDVIPTHYFAPICSTKSGDITGTVVKLDW