AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42447

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42447.t1 MTR_1g055135 64.800 375 116 9 5 366 3 374 1.90e-155 442
MS.gene42447.t1 MTR_1g055165 54.645 366 110 7 7 366 2 317 5.55e-122 355
MS.gene42447.t1 MTR_3g103020 55.616 365 144 11 14 366 19 377 1.87e-118 348
MS.gene42447.t1 MTR_5g097210 53.889 360 150 10 12 362 6 358 4.61e-111 329
MS.gene42447.t1 MTR_1g055250 78.241 216 45 2 151 365 51 265 1.09e-110 327
MS.gene42447.t1 MTR_4g117750 55.647 363 137 10 14 362 2 354 1.56e-108 327
MS.gene42447.t1 MTR_4g117750 47.015 134 57 5 246 367 350 481 6.10e-24 103
MS.gene42447.t1 MTR_4g117850 52.342 363 150 12 12 360 20 373 1.52e-105 315
MS.gene42447.t1 MTR_3g034180 49.462 372 164 12 14 366 122 488 7.79e-101 307
MS.gene42447.t1 MTR_1g055195 59.532 299 98 9 79 366 191 477 2.05e-100 305
MS.gene42447.t1 MTR_4g117770 49.600 375 165 11 6 366 2 366 4.56e-100 301
MS.gene42447.t1 MTR_4g117810 49.600 375 165 11 6 366 2 366 4.56e-100 301
MS.gene42447.t1 MTR_3g034160 49.457 368 170 10 14 366 8 374 7.54e-100 300
MS.gene42447.t1 MTR_4g122850 49.438 356 161 11 26 366 12 363 1.23e-99 300
MS.gene42447.t1 MTR_4g023080 48.895 362 162 11 14 367 8 354 1.47e-99 299
MS.gene42447.t1 MTR_6g060650 51.064 376 157 11 12 367 5 373 8.58e-99 298
MS.gene42447.t1 MTR_4g117780 48.800 375 168 12 6 366 2 366 2.91e-98 296
MS.gene42447.t1 MTR_4g023070 48.285 379 159 14 15 367 3 370 8.56e-98 295
MS.gene42447.t1 MTR_5g070088 48.556 381 158 11 14 362 6 380 3.60e-97 294
MS.gene42447.t1 MTR_5g070080 48.011 377 163 9 14 362 9 380 9.85e-97 293
MS.gene42447.t1 MTR_3g034130 50.144 347 152 10 14 343 8 350 1.12e-96 292
MS.gene42447.t1 MTR_5g070130 48.806 377 170 11 1 361 1 370 2.39e-96 292
MS.gene42447.t1 MTR_4g109280 50.959 365 154 14 14 366 7 358 7.58e-96 290
MS.gene42447.t1 MTR_4g021785 48.901 364 158 14 14 366 8 354 1.91e-95 288
MS.gene42447.t1 MTR_4g116330 47.619 378 177 12 2 366 10 379 1.45e-94 287
MS.gene42447.t1 MTR_4g117720 50.136 367 121 12 14 362 50 372 4.75e-94 286
MS.gene42447.t1 MTR_4g023090 46.272 389 171 15 1 362 2 379 7.38e-94 285
MS.gene42447.t1 MTR_4g109270 50.135 371 151 15 15 366 8 363 8.16e-94 285
MS.gene42447.t1 MTR_4g094365 47.439 371 163 12 14 366 7 363 2.66e-93 283
MS.gene42447.t1 MTR_4g023120 46.875 384 155 16 15 366 3 369 5.53e-92 280
MS.gene42447.t1 MTR_4g023130 46.111 360 134 9 14 367 8 313 1.47e-90 275
MS.gene42447.t1 MTR_4g023380 44.140 401 165 12 1 367 2 377 8.92e-90 275
MS.gene42447.t1 MTR_8g433040 45.232 367 167 9 14 366 17 363 7.41e-89 272
MS.gene42447.t1 MTR_8g032380 45.232 367 167 9 14 366 17 363 7.41e-89 272
MS.gene42447.t1 MTR_4g118380 49.307 361 143 13 12 341 5 356 1.87e-87 268
MS.gene42447.t1 MTR_4g023150 46.322 367 165 13 14 365 9 358 3.17e-87 268
MS.gene42447.t1 MTR_4g023190 47.123 365 164 15 14 365 9 357 2.82e-86 265
MS.gene42447.t1 MTR_4g023200 45.455 352 160 13 29 365 24 358 3.99e-85 262
MS.gene42447.t1 MTR_8g032390 44.444 369 162 11 7 362 32 370 5.89e-84 259
MS.gene42447.t1 MTR_4g023440 46.133 362 141 14 13 366 16 331 5.32e-83 256
MS.gene42447.t1 MTR_1g055175 62.679 209 65 4 162 366 1 200 5.23e-78 238
MS.gene42447.t1 MTR_4g116330 43.236 377 156 12 2 366 10 340 5.79e-77 241
MS.gene42447.t1 MTR_4g118370 53.878 245 88 7 125 364 33 257 8.64e-73 227
MS.gene42447.t1 MTR_8g433030 41.873 363 147 11 7 362 32 337 5.18e-71 225
MS.gene42447.t1 MTR_8g013010 48.689 267 117 8 14 270 53 309 1.73e-68 218
MS.gene42447.t1 MTR_4g121580 40.212 378 180 12 6 367 2 349 1.67e-63 207
MS.gene42447.t1 MTR_7g079370 41.983 343 168 14 44 362 16 351 5.15e-63 205
MS.gene42447.t1 MTR_4g117870 40.397 302 134 6 73 366 3 266 1.97e-61 198
MS.gene42447.t1 MTR_7g079400 44.068 295 142 12 88 366 49 336 1.02e-58 193
MS.gene42447.t1 MTR_8g102520 38.753 369 156 16 14 366 7 321 6.86e-58 191
MS.gene42447.t1 MTR_4g118400 42.484 306 128 14 70 361 23 294 3.85e-54 180
MS.gene42447.t1 MTR_2g048580 35.278 360 201 14 14 366 7 341 5.06e-54 181
MS.gene42447.t1 MTR_4g116320 50.230 217 94 7 154 362 43 253 9.44e-52 173
MS.gene42447.t1 MTR_4g116340 43.882 237 96 7 6 229 27 239 1.79e-47 161
MS.gene42447.t1 MTR_8g040935 46.226 212 99 8 165 366 1 207 3.36e-47 159
MS.gene42447.t1 MTR_6g463430 45.500 200 92 8 174 366 12 201 1.34e-40 142
MS.gene42447.t1 MTR_4g117530 41.818 220 87 7 148 366 73 252 8.24e-39 139
MS.gene42447.t1 MTR_4g114700 38.846 260 95 9 113 358 9 218 2.92e-37 134
MS.gene42447.t1 MTR_7g079420 37.358 265 130 10 112 366 905 1143 8.43e-36 139
MS.gene42447.t1 MTR_2g021150 31.915 376 212 17 11 359 10 368 3.49e-34 130
MS.gene42447.t1 MTR_1g094210 29.730 370 213 14 12 359 54 398 3.22e-32 125
MS.gene42447.t1 MTR_1g094210 30.172 348 197 13 12 338 54 376 6.53e-32 124
MS.gene42447.t1 MTR_3g014540 32.508 323 178 15 8 308 22 326 3.29e-31 122
MS.gene42447.t1 MTR_4g055060 31.348 319 176 11 7 300 22 322 4.35e-31 122
MS.gene42447.t1 MTR_4g118360 59.048 105 37 4 261 361 18 120 1.35e-30 113
MS.gene42447.t1 MTR_3g007330 32.248 307 169 10 11 300 44 328 2.95e-30 119
MS.gene42447.t1 MTR_3g014570 32.268 313 174 15 8 300 22 316 3.00e-30 119
MS.gene42447.t1 MTR_5g069120 44.199 181 78 6 25 186 1 177 3.94e-30 114
MS.gene42447.t1 MTR_3g007360 31.677 322 175 16 18 316 55 354 1.09e-29 118
MS.gene42447.t1 MTR_3g007410 31.366 322 176 16 18 316 55 354 1.24e-28 115
MS.gene42447.t1 MTR_4g061340 31.731 312 174 10 11 300 22 316 1.36e-28 114
MS.gene42447.t1 MTR_3g013770 32.915 319 176 16 13 308 31 334 1.66e-28 114
MS.gene42447.t1 MTR_1g055145 70.732 82 24 0 18 99 36 117 1.72e-28 112
MS.gene42447.t1 MTR_1g055145 52.326 86 39 2 202 286 118 202 1.44e-16 79.3
MS.gene42447.t1 MTR_2g028130 27.296 392 214 17 15 347 5 384 2.77e-28 114
MS.gene42447.t1 MTR_7g117720 39.594 197 87 7 14 199 9 184 3.58e-28 111
MS.gene42447.t1 MTR_7g117720 49.425 87 37 3 283 362 186 272 2.37e-13 70.1
MS.gene42447.t1 MTR_3g036290 32.013 303 167 12 11 300 18 294 3.76e-28 113
MS.gene42447.t1 MTR_4g117430 40.361 166 75 7 113 270 3 152 1.56e-27 106
MS.gene42447.t1 MTR_8g101580 28.726 369 230 13 10 359 40 394 1.79e-27 112
MS.gene42447.t1 MTR_1g097330 29.503 322 199 11 13 320 14 321 1.80e-27 112
MS.gene42447.t1 MTR_4g109290 41.916 167 63 5 13 174 7 144 3.12e-27 106
MS.gene42447.t1 MTR_8g098830 35.829 187 111 7 178 361 35 215 3.20e-27 107
MS.gene42447.t1 MTR_4g133170 26.970 330 197 12 15 320 4 313 3.67e-27 111
MS.gene42447.t1 MTR_5g022420 27.368 380 235 13 4 359 15 377 5.58e-27 110
MS.gene42447.t1 MTR_5g057790 32.895 304 166 13 15 299 46 330 7.08e-27 110
MS.gene42447.t1 MTR_1g050542 26.829 369 234 15 10 359 53 404 7.93e-27 110
MS.gene42447.t1 MTR_2g028140 30.183 328 167 18 15 295 5 317 9.95e-27 110
MS.gene42447.t1 MTR_2g021210 29.882 338 195 14 13 340 82 387 1.13e-26 110
MS.gene42447.t1 MTR_3g009310 31.935 310 167 14 13 300 40 327 1.38e-26 109
MS.gene42447.t1 MTR_3g011100 31.861 317 168 15 11 300 231 526 1.44e-26 111
MS.gene42447.t1 MTR_4g107820 27.676 383 228 16 2 359 27 385 1.89e-26 109
MS.gene42447.t1 MTR_4g107820 27.937 383 227 16 2 359 27 385 1.96e-26 108
MS.gene42447.t1 MTR_4g107780 27.937 383 227 16 2 359 27 385 1.96e-26 108
MS.gene42447.t1 MTR_4g107780 27.676 383 228 16 2 359 27 385 2.33e-26 109
MS.gene42447.t1 MTR_2g046830 27.720 386 218 16 13 362 23 383 4.56e-26 108
MS.gene42447.t1 MTR_2g021155 30.868 311 188 10 11 307 32 329 4.78e-26 110
MS.gene42447.t1 MTR_3g006670 29.582 311 170 12 11 295 45 332 5.74e-26 108
MS.gene42447.t1 MTR_5g057020 32.292 288 164 12 15 294 46 310 6.99e-26 107
MS.gene42447.t1 MTR_1g097490 28.969 359 224 13 15 359 49 390 1.48e-25 106
MS.gene42447.t1 MTR_6g065980 28.526 312 196 11 4 308 5 296 1.54e-25 106
MS.gene42447.t1 MTR_7g079450 44.286 140 65 6 233 366 4 136 1.54e-25 100
MS.gene42447.t1 MTR_2g055970 29.121 364 227 14 14 359 210 560 2.42e-25 107
MS.gene42447.t1 MTR_5g023000 55.914 93 38 2 277 366 6 98 2.78e-25 98.6
MS.gene42447.t1 MTR_4g108820 27.760 317 181 11 1 311 26 300 2.84e-25 104
MS.gene42447.t1 MTR_7g070880 27.072 362 207 10 12 320 18 375 3.65e-25 105
MS.gene42447.t1 MTR_3g013740 31.949 313 171 16 15 299 44 342 3.78e-25 105
MS.gene42447.t1 MTR_2g426020 27.344 384 225 14 15 358 6 375 3.89e-25 105
MS.gene42447.t1 MTR_3g036430 29.201 363 203 16 13 359 18 342 3.96e-25 104
MS.gene42447.t1 MTR_2g046900 27.011 348 222 11 13 337 26 364 4.14e-25 105
MS.gene42447.t1 MTR_7g070830 27.515 338 191 9 12 300 18 350 4.89e-25 105
MS.gene42447.t1 MTR_3g009240 29.299 314 186 11 2 295 15 312 4.97e-25 105
MS.gene42447.t1 MTR_7g407070 31.003 329 173 15 10 300 26 338 6.85e-25 105
MS.gene42447.t1 MTR_3g007430 30.820 305 166 12 18 299 46 328 8.03e-25 104
MS.gene42447.t1 MTR_3g007300 30.363 303 154 10 11 300 45 303 8.99e-25 103
MS.gene42447.t1 MTR_7g070440 29.012 324 180 14 9 300 1 306 9.52e-25 103
MS.gene42447.t1 MTR_5g007610 30.225 311 182 12 13 300 39 337 1.19e-24 104
MS.gene42447.t1 MTR_5g057710 32.013 303 170 13 15 299 46 330 1.65e-24 103
MS.gene42447.t1 MTR_3g083010 27.981 411 211 19 15 361 6 395 2.25e-24 103
MS.gene42447.t1 MTR_2g028160 29.446 343 193 18 15 317 5 338 2.41e-24 103
MS.gene42447.t1 MTR_1g097560 28.418 373 212 15 11 359 32 373 2.57e-24 102
MS.gene42447.t1 MTR_0667s0010 27.945 365 196 19 15 332 6 350 3.52e-24 103
MS.gene42447.t1 MTR_1g068875 29.355 310 173 11 15 300 4 291 1.22e-23 101
MS.gene42447.t1 MTR_4g122860 33.854 192 90 7 183 366 157 319 2.13e-23 99.8
MS.gene42447.t1 MTR_4g037465 28.982 383 206 16 5 339 11 375 2.19e-23 100
MS.gene42447.t1 MTR_2g021190 31.788 302 171 13 13 295 19 304 2.59e-23 100
MS.gene42447.t1 MTR_7g066000 29.191 346 201 15 11 320 21 358 3.56e-23 100
MS.gene42447.t1 MTR_2g426090 27.358 318 179 12 18 299 9 310 4.66e-23 99.8
MS.gene42447.t1 MTR_1g068835 28.525 305 183 11 15 300 4 292 4.80e-23 99.4
MS.gene42447.t1 MTR_2g021050 27.707 314 165 11 15 299 5 285 5.40e-23 99.4
MS.gene42447.t1 MTR_6g053260 28.763 299 184 9 13 295 335 620 5.41e-23 100
MS.gene42447.t1 MTR_0115s0020 27.226 393 236 18 15 362 10 397 5.51e-23 99.4
MS.gene42447.t1 MTR_1g088120 27.078 373 196 13 12 325 7 362 1.05e-22 99.0
MS.gene42447.t1 MTR_2g025420 25.788 349 202 12 15 317 6 343 1.38e-22 98.6
MS.gene42447.t1 MTR_8g073550 34.010 197 116 5 3 188 18 211 1.49e-22 95.1
MS.gene42447.t1 MTR_1g056710 31.935 310 169 14 11 299 30 318 1.76e-22 97.8
MS.gene42447.t1 MTR_4g070550 29.012 324 170 18 15 295 5 311 1.81e-22 98.2
MS.gene42447.t1 MTR_2g078900 29.333 300 178 13 11 295 29 309 1.86e-22 97.4
MS.gene42447.t1 MTR_6g053240 26.974 304 192 9 11 295 24 316 2.11e-22 97.8
MS.gene42447.t1 MTR_5g011200 29.841 315 185 14 3 297 5 303 2.31e-22 97.4
MS.gene42447.t1 MTR_2g426060 26.606 327 178 11 15 299 6 312 3.51e-22 97.4
MS.gene42447.t1 MTR_2g047832 26.389 360 221 13 13 337 27 377 4.45e-22 97.1
MS.gene42447.t1 MTR_5g057690 30.508 295 175 12 15 299 46 320 4.45e-22 96.7
MS.gene42447.t1 MTR_3g072470 29.395 347 170 14 10 300 5 332 7.18e-22 96.7
MS.gene42447.t1 MTR_3g009260 28.399 331 186 14 2 306 20 325 7.73e-22 95.9
MS.gene42447.t1 MTR_4g031770 29.373 303 179 11 15 299 4 289 8.51e-22 95.9
MS.gene42447.t1 MTR_2g028110 29.487 312 175 12 15 299 4 297 1.88e-21 94.7
MS.gene42447.t1 MTR_1g068860 28.664 307 182 12 15 300 4 294 2.32e-21 94.7
MS.gene42447.t1 MTR_3g010920 29.655 290 172 12 13 295 42 306 2.44e-21 94.7
MS.gene42447.t1 MTR_7g056290 29.855 345 175 13 10 300 5 336 3.20e-21 94.7
MS.gene42447.t1 MTR_2g024110 26.380 326 192 13 15 312 4 309 3.26e-21 94.0
MS.gene42447.t1 MTR_8g062660 26.667 390 220 17 2 360 9 363 4.03e-21 95.5
MS.gene42447.t1 MTR_7g060940 27.083 336 180 10 12 306 19 330 5.24e-21 94.0
MS.gene42447.t1 MTR_3g023930 28.082 292 172 13 13 295 32 294 5.68e-21 93.2
MS.gene42447.t1 MTR_3g030330 29.054 296 176 12 13 295 18 292 5.86e-21 93.2
MS.gene42447.t1 MTR_3g010430 28.896 308 175 13 11 295 32 318 8.25e-21 93.6
MS.gene42447.t1 MTR_2g425980 27.217 327 177 12 15 299 5 312 1.03e-20 93.2
MS.gene42447.t1 MTR_2g426070 27.954 347 192 17 11 317 6 334 1.05e-20 92.8
MS.gene42447.t1 MTR_8g467140 29.000 300 192 11 14 302 31 320 1.08e-20 92.0
MS.gene42447.t1 MTR_6g027910 28.084 381 217 16 18 359 12 374 1.12e-20 92.8
MS.gene42447.t1 MTR_1g442850 27.760 317 175 12 14 295 4 301 1.81e-20 92.0
MS.gene42447.t1 MTR_2g031720 28.889 315 173 14 15 299 6 299 1.91e-20 92.0
MS.gene42447.t1 MTR_3g010870 27.759 299 182 11 11 295 33 311 1.95e-20 92.0
MS.gene42447.t1 MTR_6g017280 28.492 358 182 15 15 320 9 344 2.05e-20 92.0
MS.gene42447.t1 MTR_5g048160 28.141 398 221 20 15 360 4 388 2.17e-20 92.0
MS.gene42447.t1 MTR_3g006500 27.673 318 188 13 1 299 6 300 2.32e-20 91.7
MS.gene42447.t1 MTR_1g054575 28.086 324 190 16 10 311 47 349 2.55e-20 92.8
MS.gene42447.t1 MTR_2g029990 28.667 300 177 13 16 295 52 334 2.58e-20 92.0
MS.gene42447.t1 MTR_3g007270 27.726 321 178 12 13 300 45 344 2.69e-20 92.0
MS.gene42447.t1 MTR_5g096710 30.599 317 173 11 11 295 19 320 2.83e-20 91.7
MS.gene42447.t1 MTR_7g066850 26.485 404 224 19 11 359 19 404 3.06e-20 92.0
MS.gene42447.t1 MTR_3g030250 27.907 301 178 11 13 299 35 310 3.31e-20 91.3
MS.gene42447.t1 MTR_3g436150 30.031 323 175 15 11 300 28 332 4.91e-20 90.9
MS.gene42447.t1 MTR_2g046800 27.273 330 187 9 11 299 10 327 6.60e-20 90.5
MS.gene42447.t1 MTR_4g013180 28.527 319 186 11 14 300 10 318 6.76e-20 91.3
MS.gene42447.t1 MTR_2g031680 27.507 349 205 15 15 336 6 333 7.76e-20 90.5
MS.gene42447.t1 MTR_0242s0060 29.607 331 174 13 12 297 6 322 7.86e-20 90.5
MS.gene42447.t1 MTR_0242s0040 29.607 331 174 13 12 297 6 322 7.86e-20 90.5
MS.gene42447.t1 MTR_2g026010 29.167 312 176 11 15 299 4 297 8.58e-20 90.1
MS.gene42447.t1 MTR_2g031640 27.299 348 210 14 15 336 6 336 9.89e-20 90.1
MS.gene42447.t1 MTR_0064s0160 25.377 398 237 15 14 365 41 424 1.14e-19 90.1
MS.gene42447.t1 MTR_7g056390 29.305 331 181 11 11 300 14 332 1.24e-19 90.1
MS.gene42447.t1 MTR_3g010390 28.409 352 187 17 1 309 18 347 1.25e-19 89.7
MS.gene42447.t1 MTR_2g046920 26.301 365 216 14 13 343 22 367 1.29e-19 89.4
MS.gene42447.t1 MTR_0044s0300 28.896 308 166 15 13 295 36 315 1.30e-19 89.7
MS.gene42447.t1 MTR_7g056820 24.242 363 228 11 13 340 5 355 1.36e-19 89.4
MS.gene42447.t1 MTR_6g021880 28.082 292 178 11 26 295 31 312 1.40e-19 89.4
MS.gene42447.t1 MTR_1g055200 57.143 84 33 2 110 190 6 89 1.74e-19 83.2
MS.gene42447.t1 MTR_6g080680 26.615 387 227 17 14 358 18 389 1.95e-19 89.4
MS.gene42447.t1 MTR_7g066030 25.501 349 210 10 14 320 20 360 2.43e-19 89.0
MS.gene42447.t1 MTR_1g114700 29.739 306 181 13 11 297 25 315 2.55e-19 89.0
MS.gene42447.t1 MTR_3g011060 29.938 324 171 16 10 299 23 324 3.27e-19 88.6
MS.gene42447.t1 MTR_4g023430 61.972 71 26 1 14 83 40 110 3.36e-19 85.9
MS.gene42447.t1 MTR_8g099460 27.327 333 197 13 15 317 5 322 3.62e-19 88.6
MS.gene42447.t1 MTR_8g464770 27.154 383 228 16 14 361 11 377 3.69e-19 88.2
MS.gene42447.t1 MTR_3g010590 28.477 302 172 14 11 295 32 306 4.08e-19 88.2
MS.gene42447.t1 MTR_7g055977 29.283 321 183 12 14 305 6 311 4.52e-19 88.2
MS.gene42447.t1 MTR_4g028660 24.198 405 252 14 1 360 1 395 5.42e-19 87.8
MS.gene42447.t1 MTR_4g027450 24.198 405 252 14 1 360 1 395 5.42e-19 87.8
MS.gene42447.t1 MTR_0128s0010 29.430 316 181 11 10 295 16 319 5.49e-19 87.8
MS.gene42447.t1 MTR_4g013185 28.235 340 185 10 12 300 7 338 6.38e-19 87.8
MS.gene42447.t1 MTR_4g028510 25.377 398 238 15 15 364 16 402 6.64e-19 88.2
MS.gene42447.t1 MTR_5g023570 42.342 111 60 2 10 120 32 138 7.50e-19 82.8
MS.gene42447.t1 MTR_3g083640 27.632 380 216 21 11 359 51 402 7.75e-19 87.4
MS.gene42447.t1 MTR_0128s0020 27.606 355 194 13 11 320 14 350 7.87e-19 87.4
MS.gene42447.t1 MTR_7g078860 27.134 328 183 12 14 300 8 320 9.92e-19 87.0
MS.gene42447.t1 MTR_6g048140 30.476 315 167 11 10 295 32 323 1.81e-18 86.7
MS.gene42447.t1 MTR_7g055870 27.273 341 185 12 15 300 13 345 1.95e-18 86.7
MS.gene42447.t1 MTR_3g024150 27.797 295 176 11 18 295 38 312 2.59e-18 85.9
MS.gene42447.t1 MTR_7g060960 29.102 323 167 11 12 312 29 311 2.64e-18 85.5
MS.gene42447.t1 MTR_5g046300 27.425 299 180 10 13 295 2 279 2.82e-18 85.5
MS.gene42447.t1 MTR_5g046290 27.425 299 180 10 13 295 2 279 2.82e-18 85.5
MS.gene42447.t1 MTR_1g115160 25.414 362 242 13 12 359 19 366 3.18e-18 85.5
MS.gene42447.t1 MTR_0760s0010 30.137 292 165 15 20 296 52 319 3.21e-18 85.5
MS.gene42447.t1 MTR_4g129190 31.034 232 129 10 15 229 6 223 3.43e-18 85.5
MS.gene42447.t1 MTR_4g028750 26.796 362 211 14 1 319 1 351 3.72e-18 85.5
MS.gene42447.t1 MTR_3g011120 26.741 359 223 14 1 332 1 346 3.74e-18 85.1
MS.gene42447.t1 MTR_7g057270 29.268 328 176 13 15 300 26 339 4.13e-18 85.5
MS.gene42447.t1 MTR_7g066100 27.744 328 199 10 9 300 1 326 4.82e-18 85.1
MS.gene42447.t1 MTR_7g055930 26.686 341 187 11 15 300 13 345 5.17e-18 85.1
MS.gene42447.t1 MTR_3g030240 28.571 308 161 17 11 295 33 304 8.49e-18 84.3
MS.gene42447.t1 MTR_2g104340 26.952 397 231 15 14 364 13 396 9.45e-18 84.3
MS.gene42447.t1 MTR_3g009250 30.488 246 130 10 2 226 20 245 1.08e-17 82.0
MS.gene42447.t1 MTR_2g021252 28.814 295 165 14 18 295 50 316 1.30e-17 84.0
MS.gene42447.t1 MTR_7g062060 27.108 332 194 14 14 303 11 336 1.32e-17 84.0
MS.gene42447.t1 MTR_0128s0070 28.814 354 190 14 11 320 18 353 1.35e-17 84.0
MS.gene42447.t1 MTR_7g056760 32.800 250 126 12 6 224 14 252 1.73e-17 83.6
MS.gene42447.t1 MTR_5g057643 32.911 237 130 9 15 236 46 268 1.94e-17 81.6
MS.gene42447.t1 MTR_7g066010 24.713 348 182 10 14 320 20 328 1.97e-17 83.2
MS.gene42447.t1 MTR_3g011650 30.081 246 132 10 2 226 58 284 2.03e-17 82.0
MS.gene42447.t1 MTR_7g050480 30.599 317 166 14 11 295 18 312 2.29e-17 83.2
MS.gene42447.t1 MTR_6g004660 27.244 312 195 9 15 303 16 318 3.37e-17 82.4
MS.gene42447.t1 MTR_3g006570 25.817 306 185 10 11 295 17 301 3.53e-17 82.4
MS.gene42447.t1 MTR_3g010520 28.041 296 168 16 13 295 23 286 3.67e-17 82.0
MS.gene42447.t1 MTR_3g011020 29.524 315 165 16 10 299 23 305 4.26e-17 82.0
MS.gene42447.t1 MTR_3g024110 27.213 305 180 11 8 295 94 373 4.35e-17 82.8
MS.gene42447.t1 MTR_5g069930 26.100 341 207 12 14 320 5 334 5.68e-17 81.6
MS.gene42447.t1 MTR_7g077970 28.319 339 189 11 13 307 5 333 6.28e-17 82.0
MS.gene42447.t1 MTR_7g052150 27.019 322 186 9 12 302 19 322 6.45e-17 82.0
MS.gene42447.t1 MTR_5g008530 70.175 57 15 1 15 71 18 72 7.21e-17 74.7
MS.gene42447.t1 MTR_7g028660 26.220 328 195 10 12 306 8 321 7.71e-17 81.6
MS.gene42447.t1 MTR_3g024040 27.541 305 185 13 21 311 37 319 8.03e-17 81.3
MS.gene42447.t1 MTR_4g033495 27.174 368 191 18 12 324 24 369 8.05e-17 81.6
MS.gene42447.t1 MTR_7g061050 28.125 320 178 13 14 300 12 312 9.00e-17 81.3
MS.gene42447.t1 MTR_7g050520 29.968 317 168 13 11 295 18 312 9.17e-17 81.3
MS.gene42447.t1 MTR_7g078040 28.235 340 186 13 12 300 6 338 9.56e-17 81.6
MS.gene42447.t1 MTR_4g028680 25.424 413 246 17 1 364 1 400 1.32e-16 80.9
MS.gene42447.t1 MTR_3g030310 25.484 310 182 13 13 295 19 306 1.32e-16 80.9
MS.gene42447.t1 MTR_3g058480 28.571 287 163 12 13 277 37 303 1.36e-16 80.1
MS.gene42447.t1 MTR_8g066440 26.263 396 230 19 13 360 21 402 1.73e-16 80.5
MS.gene42447.t1 MTR_5g046260 25.698 358 193 14 13 359 2 297 1.74e-16 79.3
MS.gene42447.t1 MTR_7g077070 27.273 330 193 11 15 300 16 342 1.87e-16 80.5
MS.gene42447.t1 MTR_6g048120 27.097 310 188 9 10 295 31 326 2.10e-16 80.5
MS.gene42447.t1 MTR_2g078850 28.082 292 181 10 18 295 33 309 2.43e-16 79.7
MS.gene42447.t1 MTR_2g024100 26.623 308 177 12 22 295 14 306 2.61e-16 80.1
MS.gene42447.t1 MTR_4g011660 32.673 202 111 8 11 191 15 212 2.90e-16 80.1
MS.gene42447.t1 MTR_8g064890 28.065 367 188 19 14 336 15 349 3.25e-16 79.7
MS.gene42447.t1 MTR_4g080200 26.074 349 209 15 15 340 3 325 3.35e-16 79.3
MS.gene42447.t1 MTR_0267s0050 26.346 353 190 15 18 320 9 341 3.47e-16 79.7
MS.gene42447.t1 MTR_0054s0090 25.000 400 242 14 14 364 16 406 3.52e-16 79.7
MS.gene42447.t1 MTR_1g054725 26.250 320 172 14 11 295 16 306 3.65e-16 79.3
MS.gene42447.t1 MTR_7g050490 34.694 196 102 9 11 191 4 188 3.66e-16 76.3
MS.gene42447.t1 MTR_7g062100 27.445 317 183 11 15 300 24 324 4.19e-16 79.3
MS.gene42447.t1 MTR_7g007300 28.939 311 170 15 11 299 97 378 4.37e-16 79.7
MS.gene42447.t1 MTR_6g092560 25.305 328 179 12 12 295 9 314 4.47e-16 79.7
MS.gene42447.t1 MTR_3g058470 26.400 375 210 16 13 359 35 371 5.09e-16 79.0
MS.gene42447.t1 MTR_6g055210 28.261 322 179 13 13 294 20 329 6.89e-16 79.0
MS.gene42447.t1 MTR_2g066170 27.586 348 211 15 4 319 1 339 7.56e-16 78.6
MS.gene42447.t1 MTR_5g069760 25.588 340 217 11 14 327 5 334 7.59e-16 78.6
MS.gene42447.t1 MTR_0097s0030 25.606 371 205 16 15 341 14 357 8.71e-16 78.6
MS.gene42447.t1 MTR_2g047240 25.606 371 205 16 15 341 14 357 8.71e-16 78.6
MS.gene42447.t1 MTR_7g056710 25.287 348 206 14 9 320 12 341 9.18e-16 78.2
MS.gene42447.t1 MTR_4g014370 25.182 413 232 18 14 363 10 408 9.87e-16 78.6
MS.gene42447.t1 MTR_0054s0100 24.460 417 253 15 1 364 1 408 1.03e-15 78.2
MS.gene42447.t1 MTR_7g067680 26.974 304 169 12 10 295 43 311 1.04e-15 78.2
MS.gene42447.t1 MTR_4g027370 26.124 356 184 14 15 304 30 372 1.19e-15 78.6
MS.gene42447.t1 MTR_4g013175 27.988 343 182 12 12 300 7 338 1.29e-15 78.2
MS.gene42447.t1 MTR_1g055070 28.358 268 158 13 10 250 44 304 1.33e-15 77.8
MS.gene42447.t1 MTR_1g061330 25.195 385 227 13 15 365 4 361 1.48e-15 77.8
MS.gene42447.t1 MTR_4g130330 24.390 410 237 15 9 364 1 391 1.63e-15 77.8
MS.gene42447.t1 MTR_3g036335 27.157 313 175 15 10 295 36 322 1.92e-15 77.4
MS.gene42447.t1 MTR_3g006530 23.529 306 192 11 13 295 38 324 2.00e-15 77.4
MS.gene42447.t1 MTR_7g055987 30.357 336 166 18 2 300 7 311 2.05e-15 77.0
MS.gene42447.t1 MTR_7g056570 26.611 357 188 16 11 320 14 343 2.74e-15 77.0
MS.gene42447.t1 MTR_7g091630 25.070 355 216 14 10 320 27 375 3.45e-15 77.0
MS.gene42447.t1 MTR_6g079810 24.816 407 240 18 14 365 69 464 3.53e-15 77.0
MS.gene42447.t1 MTR_3g013950 25.068 367 179 16 18 320 9 343 3.57e-15 76.6
MS.gene42447.t1 MTR_4g024890 24.290 317 195 9 14 300 9 310 3.71e-15 76.6
MS.gene42447.t1 MTR_6g016285 27.190 331 176 13 12 295 18 330 3.75e-15 76.6
MS.gene42447.t1 MTR_7g061060 27.077 325 178 14 14 300 12 315 4.01e-15 76.6
MS.gene42447.t1 MTR_7g056200 28.363 342 182 13 14 320 22 335 4.27e-15 76.3
MS.gene42447.t1 MTR_5g022090 27.246 334 179 14 5 311 20 316 4.52e-15 76.3
MS.gene42447.t1 MTR_8g039500 27.586 348 212 15 4 324 1 335 4.53e-15 75.9
MS.gene42447.t1 MTR_3g010970 26.621 293 173 11 18 295 51 316 5.19e-15 76.3
MS.gene42447.t1 MTR_5g097680 24.942 433 224 18 14 365 16 428 5.62e-15 76.3
MS.gene42447.t1 MTR_6g090180 25.187 401 234 15 14 360 46 434 7.20e-15 75.9
MS.gene42447.t1 MTR_3g010620 26.733 303 174 12 11 295 29 301 7.20e-15 75.9
MS.gene42447.t1 MTR_5g057040 35.057 174 95 6 15 174 46 215 7.74e-15 76.6
MS.gene42447.t1 MTR_1g055375 27.869 305 182 14 18 299 7 296 8.16e-15 75.5
MS.gene42447.t1 MTR_4g030830 27.095 358 192 16 15 320 9 349 9.58e-15 75.5
MS.gene42447.t1 MTR_7g052670 26.494 385 198 17 11 320 7 381 1.11e-14 75.5
MS.gene42447.t1 MTR_7g056503 25.915 328 213 11 2 303 7 330 1.17e-14 75.1
MS.gene42447.t1 MTR_1g055055 24.528 318 183 14 3 299 12 293 1.33e-14 74.3
MS.gene42447.t1 MTR_3g058440 29.098 244 133 11 10 228 28 256 1.54e-14 73.9
MS.gene42447.t1 MTR_6g017270 31.000 200 121 8 9 191 3 202 1.61e-14 74.3
MS.gene42447.t1 MTR_1g037540 27.273 374 219 17 15 339 5 374 1.77e-14 74.7
MS.gene42447.t1 MTR_7g066840 26.425 386 232 18 15 359 23 397 2.11e-14 74.3
MS.gene42447.t1 MTR_6g086825 23.153 406 245 16 14 365 69 461 2.38e-14 74.3
MS.gene42447.t1 MTR_2g006360 27.891 294 153 13 18 302 49 292 2.62e-14 73.9
MS.gene42447.t1 MTR_7g022600 29.084 251 137 9 5 224 13 253 3.29e-14 73.9
MS.gene42447.t1 MTR_7g061090 26.220 328 189 12 14 300 21 336 3.49e-14 73.6
MS.gene42447.t1 MTR_2g022000 26.027 365 202 15 14 319 15 370 3.66e-14 73.9
MS.gene42447.t1 MTR_7g077990 24.478 335 195 11 4 300 3 317 4.44e-14 73.2
MS.gene42447.t1 MTR_7g055850 26.766 269 149 11 15 242 13 274 5.44e-14 72.0
MS.gene42447.t1 MTR_0831s0010 25.616 406 228 18 8 365 43 422 5.52e-14 73.2
MS.gene42447.t1 MTR_8g041270 25.298 419 247 16 1 365 1 407 6.15e-14 72.8
MS.gene42447.t1 MTR_5g056020 26.866 335 184 15 13 295 15 340 6.24e-14 73.2
MS.gene42447.t1 MTR_7g056260 25.321 312 198 7 15 300 14 316 6.28e-14 72.4
MS.gene42447.t1 MTR_7g017040 26.290 407 223 17 14 365 15 399 6.77e-14 72.8
MS.gene42447.t1 MTR_7g445890 28.497 193 103 4 12 191 13 183 6.82e-14 72.8
MS.gene42447.t1 MTR_3g437520 29.070 344 167 18 15 300 23 347 6.91e-14 73.2
MS.gene42447.t1 MTR_7g056170 25.272 368 189 15 14 320 74 416 7.01e-14 73.2
MS.gene42447.t1 MTR_7g016930 28.213 319 165 17 14 296 15 305 8.18e-14 72.0
MS.gene42447.t1 MTR_8g063440 25.634 355 206 15 4 319 1 336 8.42e-14 72.4
MS.gene42447.t1 MTR_3g010870 27.347 245 146 9 6 236 26 252 8.54e-14 72.0
MS.gene42447.t1 MTR_2g437110 27.506 389 220 21 15 359 22 392 9.38e-14 72.8
MS.gene42447.t1 MTR_5g069390 25.436 401 229 18 14 358 25 411 1.01e-13 72.8
MS.gene42447.t1 MTR_7g013590 28.904 301 172 14 18 295 39 320 1.17e-13 72.0
MS.gene42447.t1 MTR_8g063350 25.915 328 177 18 14 319 13 296 1.23e-13 71.6
MS.gene42447.t1 MTR_2g047878 24.282 383 230 16 6 359 12 363 1.38e-13 71.6
MS.gene42447.t1 MTR_3g023940 26.645 304 183 13 13 295 32 316 1.50e-13 71.6
MS.gene42447.t1 MTR_2g047892 28.511 235 135 10 12 228 19 238 1.58e-13 71.6
MS.gene42447.t1 MTR_0627s0010 25.378 331 187 10 15 296 38 357 1.87e-13 71.6
MS.gene42447.t1 MTR_6g478230 23.951 405 231 18 14 364 26 407 1.96e-13 71.6
MS.gene42447.t1 MTR_2g047200 23.939 330 202 13 12 306 17 332 2.19e-13 71.2
MS.gene42447.t1 MTR_7g069550 26.197 355 198 18 15 319 14 354 2.71e-13 70.9
MS.gene42447.t1 MTR_1g112930 26.333 300 182 15 12 294 22 299 3.15e-13 70.5
MS.gene42447.t1 MTR_7g056717 30.581 327 171 19 9 302 16 319 3.44e-13 70.5
MS.gene42447.t1 MTR_6g013270 25.949 316 185 13 9 297 23 316 3.55e-13 70.5
MS.gene42447.t1 MTR_6g007135 24.262 305 201 10 15 299 26 320 4.88e-13 70.1
MS.gene42447.t1 MTR_0129s0070 24.818 411 223 17 14 366 16 398 7.87e-13 69.7
MS.gene42447.t1 MTR_2g021800 23.971 413 239 17 14 363 15 415 8.03e-13 69.7
MS.gene42447.t1 MTR_7g056737 26.911 327 185 15 9 303 16 320 8.67e-13 69.3
MS.gene42447.t1 MTR_3g030350 26.852 324 185 13 9 307 29 325 9.71e-13 69.3
MS.gene42447.t1 MTR_8g013005 56.897 58 23 2 311 366 1 58 9.74e-13 62.8
MS.gene42447.t1 MTR_7g061100 29.412 221 113 9 14 230 12 193 9.87e-13 68.6
MS.gene42447.t1 MTR_7g079160 25.464 377 206 14 14 320 7 378 1.13e-12 69.3
MS.gene42447.t1 MTR_8g063310 25.581 387 234 20 14 360 21 393 1.21e-12 68.9
MS.gene42447.t1 MTR_4g006270 25.667 300 167 12 15 293 4 268 1.48e-12 68.9
MS.gene42447.t1 MTR_4g030110 27.532 316 197 11 2 300 19 319 1.64e-12 68.6
MS.gene42447.t1 MTR_2g025960 25.600 250 134 12 106 317 1 236 1.78e-12 67.8
MS.gene42447.t1 MTR_5g043605 24.709 344 169 13 14 334 24 300 1.86e-12 68.2
MS.gene42447.t1 MTR_7g078840 27.273 352 179 19 12 300 7 344 2.03e-12 68.6
MS.gene42447.t1 MTR_4g030980 24.317 366 205 12 1 303 1 357 2.47e-12 68.2
MS.gene42447.t1 MTR_4g030090 25.974 308 195 11 15 295 14 315 2.62e-12 67.8
MS.gene42447.t1 MTR_3g010440 30.303 132 86 3 11 137 22 152 3.40e-12 67.4
MS.gene42447.t1 MTR_2g078870 27.600 250 148 11 60 295 2 232 3.98e-12 66.6
MS.gene42447.t1 MTR_1g007450 25.967 362 213 14 15 332 12 362 4.29e-12 67.4
MS.gene42447.t1 MTR_7g078050 36.434 129 70 4 12 131 3 128 4.55e-12 65.9
MS.gene42447.t1 MTR_0134s0060 22.359 407 245 16 14 359 11 407 4.56e-12 67.4
MS.gene42447.t1 MTR_5g072060 26.866 335 203 15 14 319 5 326 4.73e-12 67.8
MS.gene42447.t1 MTR_2g033410 25.698 358 216 14 15 347 9 341 6.76e-12 66.6
MS.gene42447.t1 MTR_4g019990 24.051 395 229 14 14 359 5 377 7.35e-12 66.6
MS.gene42447.t1 MTR_2g104280 23.114 411 254 13 7 365 6 406 9.82e-12 66.2
MS.gene42447.t1 MTR_5g010660 24.601 313 183 13 15 303 34 317 1.38e-11 65.9
MS.gene42447.t1 MTR_1g071010 26.891 238 155 9 1 225 1 232 2.00e-11 65.1
MS.gene42447.t1 MTR_0649s0020 26.126 333 179 13 12 300 8 317 2.02e-11 65.1
MS.gene42447.t1 MTR_5g068040 30.131 229 124 10 12 227 13 218 2.12e-11 65.1
MS.gene42447.t1 MTR_1g115185 23.836 365 217 16 13 353 37 364 2.66e-11 65.1
MS.gene42447.t1 MTR_6g042600 34.969 163 72 7 11 163 32 170 2.72e-11 64.7
MS.gene42447.t1 MTR_3g007380 35.433 127 72 4 18 138 33 155 2.86e-11 63.2
MS.gene42447.t1 MTR_7g091640 25.000 324 198 14 14 303 34 346 3.25e-11 64.3
MS.gene42447.t1 MTR_5g027330 23.242 327 205 13 19 312 44 357 4.08e-11 64.3
MS.gene42447.t1 MTR_5g027370 22.936 327 206 13 19 312 33 346 4.09e-11 64.3
MS.gene42447.t1 MTR_7g056797 31.250 208 117 8 6 191 14 217 4.62e-11 64.3
MS.gene42447.t1 MTR_1g015730 26.154 325 180 12 12 300 6 306 5.11e-11 63.9
MS.gene42447.t1 MTR_3g464470 25.079 315 194 10 14 300 6 306 7.05e-11 63.5
MS.gene42447.t1 MTR_6g004210 24.451 319 180 12 26 299 36 338 8.81e-11 63.2
MS.gene42447.t1 MTR_2g022170 36.066 122 68 4 18 138 7 119 8.90e-11 59.7
MS.gene42447.t1 MTR_7g079640 25.138 362 213 14 14 340 12 350 9.19e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42447.t1 AT3G23880 29.235 366 233 13 8 359 7 360 2.38e-27 111
MS.gene42447.t1 AT5G49610 29.670 364 192 18 15 347 9 339 6.81e-24 101
MS.gene42447.t1 AT3G06240 26.087 368 207 13 15 332 36 388 8.46e-24 102
MS.gene42447.t1 AT1G33530 29.452 292 175 12 15 296 97 367 2.42e-21 95.1
MS.gene42447.t1 AT4G12560 26.687 326 192 14 15 309 4 313 5.16e-20 91.3
MS.gene42447.t1 AT4G12560 26.687 326 192 14 15 309 4 313 5.16e-20 91.3
MS.gene42447.t1 AT4G12560 26.687 326 192 14 15 309 4 313 5.16e-20 91.3
MS.gene42447.t1 AT4G22390 24.611 321 214 10 16 315 5 318 2.93e-17 82.8
MS.gene42447.t1 AT4G22390 24.611 321 214 10 16 315 5 318 3.55e-17 82.8
MS.gene42447.t1 AT4G19930 25.067 375 204 14 10 338 38 381 2.00e-16 80.5
MS.gene42447.t1 AT3G17710 25.000 384 234 17 15 366 6 367 3.48e-14 73.6
MS.gene42447.t1 AT3G10430 27.160 243 148 11 15 246 5 229 4.82e-14 73.2
MS.gene42447.t1 AT3G49980 27.451 306 194 14 15 303 6 300 4.83e-14 73.2
MS.gene42447.t1 AT3G49980 27.451 306 194 14 15 303 5 299 5.13e-14 73.2
MS.gene42447.t1 AT3G16590 28.125 320 192 16 12 309 2 305 2.70e-13 70.9
MS.gene42447.t1 AT1G12870 22.074 376 234 12 15 352 33 387 3.50e-13 70.9
MS.gene42447.t1 AT3G07870 24.765 319 202 12 15 307 28 334 6.12e-13 70.1
MS.gene42447.t1 AT1G58090 28.374 289 174 15 15 286 6 278 7.09e-13 69.7
MS.gene42447.t1 AT1G30790 27.019 322 186 16 4 295 1 303 9.75e-13 69.3
MS.gene42447.t1 AT1G14315 32.812 128 80 3 15 138 4 129 3.17e-11 63.9
MS.gene42447.t1 AT3G21120 25.904 166 114 2 14 170 2 167 6.11e-11 63.5
MS.gene42447.t1 AT1G13200 23.981 417 225 17 12 359 40 433 7.65e-11 63.5
MS.gene42447.t1 AT4G10190 23.779 307 209 13 15 308 9 303 8.71e-11 63.2

Find 83 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGTTTGTGAACAAAATT+AGG 0.084117 1.4:-46739183 None:intergenic
GTTCTACAAATTATGGTTTA+TGG 0.098879 1.4:+46739661 MS.gene42447:CDS
CGTTCAAATTTCTGTGGTTT+TGG 0.137814 1.4:+46739330 MS.gene42447:CDS
ACAAATAGTGGTGATATTAT+TGG 0.256402 1.4:+46739837 MS.gene42447:CDS
GTGGTAGAGTTGGTCTTTAA+TGG 0.271046 1.4:+46739528 MS.gene42447:CDS
TTAGAGGATTTCTCAGTCTA+TGG 0.277856 1.4:+46739688 MS.gene42447:CDS
ACAAGGATAGAGTTGATATA+TGG 0.280423 1.4:+46739721 MS.gene42447:CDS
TGGTAGAGTTGGTCTTTAAT+GGG 0.286643 1.4:+46739529 MS.gene42447:CDS
CCGGTAACCTCAGTAGGATT+TGG 0.294575 1.4:-46738960 None:intergenic
TTCTACAAATTATGGTTTAT+GGG 0.295877 1.4:+46739662 MS.gene42447:CDS
CCCATTTGTTGTACAAATAG+TGG 0.304476 1.4:+46739825 MS.gene42447:CDS
CGTGAACAACCATTGTAATA+AGG 0.324756 1.4:-46739309 None:intergenic
ACCACTATTTGTACAACAAA+TGG 0.328724 1.4:-46739826 None:intergenic
TATGGTTTATGGGTATTTAG+AGG 0.340052 1.4:+46739672 MS.gene42447:CDS
GAACAAAATTCAAAATCATT+TGG 0.352361 1.4:-46739642 None:intergenic
CAAGTTTGTGAACAAAATTA+GGG 0.359537 1.4:-46739182 None:intergenic
TCAAATCCGTTTGTAAATCA+TGG 0.368646 1.4:+46739001 MS.gene42447:CDS
CCACTATTTGTACAACAAAT+GGG 0.379610 1.4:-46739825 None:intergenic
GGATTCCATAGGTAAATGTT+TGG 0.387131 1.4:-46739261 None:intergenic
AATAGCACATCATCTGAGTT+TGG 0.389802 1.4:-46739402 None:intergenic
ATCATCTGAGTTTGGAATAT+AGG 0.390452 1.4:-46739394 None:intergenic
TCTTTAATGGGGCTATTCAT+TGG 0.397887 1.4:+46739541 MS.gene42447:CDS
GACGATGGCGGAGGCGGAGG+TGG 0.399406 1.4:+46738903 MS.gene42447:CDS
ATCAATTCATCAGGCAGATA+TGG 0.401904 1.4:-46738934 None:intergenic
TGAACTTCGATCCATAGCTT+TGG 0.408425 1.4:+46739119 MS.gene42447:CDS
CGGTAACCTCAGTAGGATTT+GGG 0.409670 1.4:-46738959 None:intergenic
CAGCCTTTCATTTAACAGAA+AGG 0.419504 1.4:+46739598 MS.gene42447:CDS
TAAAGTAGGAGCAGAATTAC+CGG 0.420656 1.4:-46739154 None:intergenic
CCAAATCCTACTGAGGTTAC+CGG 0.421059 1.4:+46738960 MS.gene42447:CDS
GGAGACGATGGCGGAGGCGG+AGG 0.424370 1.4:+46738900 MS.gene42447:CDS
GGACCTCACTCCAAGGCAAA+TGG 0.426011 1.4:-46739482 None:intergenic
GCTTTGGATTCGTCATTTAC+CGG 0.428262 1.4:+46739135 MS.gene42447:CDS
AATACAAAGTGCAATCATCT+TGG 0.438377 1.4:+46739754 MS.gene42447:CDS
TGAGTCCTACCCATTTGCCT+TGG 0.460547 1.4:+46739472 MS.gene42447:CDS
CAAGGATAGAGTTGATATAT+GGG 0.473734 1.4:+46739722 MS.gene42447:CDS
TTTCCTTTCTGTTAAATGAA+AGG 0.475427 1.4:-46739601 None:intergenic
AAATTAGGGTTGAGTAAAGT+AGG 0.479104 1.4:-46739168 None:intergenic
AAACGAATAAGAGACTTAAC+CGG 0.485358 1.4:-46738979 None:intergenic
TTAATCTTGCTCACTGACAC+TGG 0.485956 1.4:-46739979 None:intergenic
CCGTGAACCTTTACAATAGT+AGG 0.489563 1.4:-46739919 None:intergenic
CTTATCCAAACATTTACCTA+TGG 0.489607 1.4:+46739256 MS.gene42447:CDS
TAGAGGATTTCTCAGTCTAT+GGG 0.489737 1.4:+46739689 MS.gene42447:CDS
TGATTATCCCGTGGTAGAGT+TGG 0.497238 1.4:+46739518 MS.gene42447:CDS
CATGGAGACGATGGCGGAGG+CGG 0.497957 1.4:+46738897 None:intergenic
ATTTGGGTGATCAATTCATC+AGG 0.500913 1.4:-46738943 None:intergenic
AGAAAACCATGATTTACAAA+CGG 0.506591 1.4:-46739007 None:intergenic
AAATGACGAATCCAAAGCTA+TGG 0.515748 1.4:-46739130 None:intergenic
AACTGTGAATTTGCAAAACT+AGG 0.518550 1.4:-46739042 None:intergenic
GACCTCACTCCAAGGCAAAT+GGG 0.520808 1.4:-46739481 None:intergenic
AGGTATTTGTTTGTGAACTC+CGG 0.522279 1.4:-46739289 None:intergenic
TACCCATTTGCCTTGGAGTG+AGG 0.526044 1.4:+46739479 MS.gene42447:CDS
CCTACTATTGTAAAGGTTCA+CGG 0.526909 1.4:+46739919 MS.gene42447:CDS
GAGCATACCTACTATTGTAA+AGG 0.535135 1.4:+46739912 MS.gene42447:CDS
ATGATGTGCTATTTCGCTTG+AGG 0.544932 1.4:+46739412 MS.gene42447:CDS
ACGCATGGAGACGATGGCGG+AGG 0.546830 1.4:+46738894 None:intergenic
TGAGTCAAAAGACGATTACT+TGG 0.549837 1.4:+46739359 MS.gene42447:CDS
CACTATTTGTACAACAAATG+GGG 0.558396 1.4:-46739824 None:intergenic
TGTTTGTGAACTCCGGTGGA+TGG 0.577672 1.4:-46739282 None:intergenic
ACTTAACCGGTAACCTCAGT+AGG 0.580311 1.4:-46738966 None:intergenic
AAACAAATACCTTATTACAA+TGG 0.582773 1.4:+46739300 MS.gene42447:CDS
TGTTCACGTTCAAATTTCTG+TGG 0.587620 1.4:+46739324 MS.gene42447:CDS
TAATCTTGCTCACTGACACT+GGG 0.591318 1.4:-46739978 None:intergenic
TACCTATGGAATCCATCCAC+CGG 0.599416 1.4:+46739270 MS.gene42447:CDS
TTTACGCATGGAGACGATGG+CGG 0.606954 1.4:+46738891 None:intergenic
TTAAAGACCAACTCTACCAC+GGG 0.607509 1.4:-46739525 None:intergenic
GGTAGAGTTGGTCTTTAATG+GGG 0.612617 1.4:+46739530 MS.gene42447:CDS
TAAAACTCTTGTTCTCAGCA+TGG 0.617540 1.4:+46739779 MS.gene42447:CDS
GATAATCAGAACAACAAGAC+GGG 0.619539 1.4:-46739503 None:intergenic
AATTCATCAGGCAGATATGG+TGG 0.619605 1.4:-46738931 None:intergenic
TCATCAGGCAGATATGGTGG+TGG 0.622257 1.4:-46738928 None:intergenic
TCTCATTGAGAGCTAATGCG+TGG 0.627280 1.4:+46739439 MS.gene42447:CDS
ACTATTTGTACAACAAATGG+GGG 0.633848 1.4:-46739823 None:intergenic
CAAGACGGGACCTCACTCCA+AGG 0.634332 1.4:-46739489 None:intergenic
TATTTGTTTGTGAACTCCGG+TGG 0.640963 1.4:-46739286 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.641792 1.4:-46739272 None:intergenic
TCACTCCAAGGCAAATGGGT+AGG 0.642299 1.4:-46739477 None:intergenic
ATTAAAGACCAACTCTACCA+CGG 0.648500 1.4:-46739526 None:intergenic
TTGATTAGATATGATGACAA+CGG 0.651056 1.4:+46739879 MS.gene42447:CDS
GGATAATCAGAACAACAAGA+CGG 0.666238 1.4:-46739504 None:intergenic
ATTGGAACAAGCTACCACAC+TGG 0.667514 1.4:+46739855 MS.gene42447:CDS
TTGTTGTTCTGATTATCCCG+TGG 0.685352 1.4:+46739509 MS.gene42447:CDS
TGATCACCCAAATCCTACTG+AGG 0.690955 1.4:+46738953 MS.gene42447:CDS
CATATCTAATCAATCCAGTG+TGG 0.713231 1.4:-46739869 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAATACCTTATTACAA+TGG + chr1.4:46739300-46739319 MS.gene42447:CDS 20.0%
!! GAACAAAATTCAAAATCATT+TGG - chr1.4:46739645-46739664 None:intergenic 20.0%
!! TTCTACAAATTATGGTTTAT+GGG + chr1.4:46739662-46739681 MS.gene42447:CDS 20.0%
!!! GAATTTTGTTCTACAAATTA+TGG + chr1.4:46739654-46739673 MS.gene42447:CDS 20.0%
!!! GATTCACATATCAAAATTTT+AGG + chr1.4:46739204-46739223 MS.gene42447:CDS 20.0%
! ACAAATAGTGGTGATATTAT+TGG + chr1.4:46739837-46739856 MS.gene42447:CDS 25.0%
! AGAAAACCATGATTTACAAA+CGG - chr1.4:46739010-46739029 None:intergenic 25.0%
! CAAGTTTGTGAACAAAATTA+GGG - chr1.4:46739185-46739204 None:intergenic 25.0%
! GTTCTACAAATTATGGTTTA+TGG + chr1.4:46739661-46739680 MS.gene42447:CDS 25.0%
! TCAAGTTTGTGAACAAAATT+AGG - chr1.4:46739186-46739205 None:intergenic 25.0%
! TTGATTAGATATGATGACAA+CGG + chr1.4:46739879-46739898 MS.gene42447:CDS 25.0%
! TTTCCTTTCTGTTAAATGAA+AGG - chr1.4:46739604-46739623 None:intergenic 25.0%
!!! AAAATTTTAGGTTCATGTAG+AGG + chr1.4:46739216-46739235 MS.gene42447:CDS 25.0%
!!! AAATTTTAGGTTCATGTAGA+GGG + chr1.4:46739217-46739236 MS.gene42447:CDS 25.0%
AAACGAATAAGAGACTTAAC+CGG - chr1.4:46738982-46739001 None:intergenic 30.0%
AAATTAGGGTTGAGTAAAGT+AGG - chr1.4:46739171-46739190 None:intergenic 30.0%
AACTGTGAATTTGCAAAACT+AGG - chr1.4:46739045-46739064 None:intergenic 30.0%
AATACAAAGTGCAATCATCT+TGG + chr1.4:46739754-46739773 MS.gene42447:CDS 30.0%
ACCACTATTTGTACAACAAA+TGG - chr1.4:46739829-46739848 None:intergenic 30.0%
ACTATTTGTACAACAAATGG+GGG - chr1.4:46739826-46739845 None:intergenic 30.0%
CACTATTTGTACAACAAATG+GGG - chr1.4:46739827-46739846 None:intergenic 30.0%
CCACTATTTGTACAACAAAT+GGG - chr1.4:46739828-46739847 None:intergenic 30.0%
CTTATCCAAACATTTACCTA+TGG + chr1.4:46739256-46739275 MS.gene42447:CDS 30.0%
TATGGTTTATGGGTATTTAG+AGG + chr1.4:46739672-46739691 MS.gene42447:CDS 30.0%
TCAAATCCGTTTGTAAATCA+TGG + chr1.4:46739001-46739020 MS.gene42447:CDS 30.0%
! ATCATCTGAGTTTGGAATAT+AGG - chr1.4:46739397-46739416 None:intergenic 30.0%
! GTTCAAATTTCTGTGGTTTT+GGG + chr1.4:46739331-46739350 MS.gene42447:CDS 30.0%
!! ACAAGGATAGAGTTGATATA+TGG + chr1.4:46739721-46739740 MS.gene42447:CDS 30.0%
!! CAAGGATAGAGTTGATATAT+GGG + chr1.4:46739722-46739741 MS.gene42447:CDS 30.0%
AAATGACGAATCCAAAGCTA+TGG - chr1.4:46739133-46739152 None:intergenic 35.0%
AATAGCACATCATCTGAGTT+TGG - chr1.4:46739405-46739424 None:intergenic 35.0%
AGGTATTTGTTTGTGAACTC+CGG - chr1.4:46739292-46739311 None:intergenic 35.0%
ATCAATTCATCAGGCAGATA+TGG - chr1.4:46738937-46738956 None:intergenic 35.0%
ATTAAAGACCAACTCTACCA+CGG - chr1.4:46739529-46739548 None:intergenic 35.0%
ATTTGGGTGATCAATTCATC+AGG - chr1.4:46738946-46738965 None:intergenic 35.0%
CAGCCTTTCATTTAACAGAA+AGG + chr1.4:46739598-46739617 MS.gene42447:CDS 35.0%
CATATCTAATCAATCCAGTG+TGG - chr1.4:46739872-46739891 None:intergenic 35.0%
CCTACTATTGTAAAGGTTCA+CGG + chr1.4:46739919-46739938 MS.gene42447:CDS 35.0%
CGTGAACAACCATTGTAATA+AGG - chr1.4:46739312-46739331 None:intergenic 35.0%
GAGCATACCTACTATTGTAA+AGG + chr1.4:46739912-46739931 MS.gene42447:CDS 35.0%
GATAATCAGAACAACAAGAC+GGG - chr1.4:46739506-46739525 None:intergenic 35.0%
GGATAATCAGAACAACAAGA+CGG - chr1.4:46739507-46739526 None:intergenic 35.0%
GGATTCCATAGGTAAATGTT+TGG - chr1.4:46739264-46739283 None:intergenic 35.0%
TAAAACTCTTGTTCTCAGCA+TGG + chr1.4:46739779-46739798 MS.gene42447:CDS 35.0%
TAAAGTAGGAGCAGAATTAC+CGG - chr1.4:46739157-46739176 None:intergenic 35.0%
TAGAGGATTTCTCAGTCTAT+GGG + chr1.4:46739689-46739708 MS.gene42447:CDS 35.0%
TCTTTAATGGGGCTATTCAT+TGG + chr1.4:46739541-46739560 MS.gene42447:CDS 35.0%
TGAGTCAAAAGACGATTACT+TGG + chr1.4:46739359-46739378 MS.gene42447:CDS 35.0%
TGTTCACGTTCAAATTTCTG+TGG + chr1.4:46739324-46739343 MS.gene42447:CDS 35.0%
TTAGAGGATTTCTCAGTCTA+TGG + chr1.4:46739688-46739707 MS.gene42447:CDS 35.0%
! CGTTCAAATTTCTGTGGTTT+TGG + chr1.4:46739330-46739349 MS.gene42447:CDS 35.0%
!! CCCATTTGTTGTACAAATAG+TGG + chr1.4:46739825-46739844 MS.gene42447:CDS 35.0%
!! TGGTAGAGTTGGTCTTTAAT+GGG + chr1.4:46739529-46739548 MS.gene42447:CDS 35.0%
!! TTAGCTTTTCGTGATGAGAT+AGG + chr1.4:46739564-46739583 MS.gene42447:CDS 35.0%
AATTCATCAGGCAGATATGG+TGG - chr1.4:46738934-46738953 None:intergenic 40.0%
CCGTGAACCTTTACAATAGT+AGG - chr1.4:46739922-46739941 None:intergenic 40.0%
TAATCTTGCTCACTGACACT+GGG - chr1.4:46739981-46740000 None:intergenic 40.0%
TATTTGTTTGTGAACTCCGG+TGG - chr1.4:46739289-46739308 None:intergenic 40.0%
TGAACTTCGATCCATAGCTT+TGG + chr1.4:46739119-46739138 MS.gene42447:CDS 40.0%
TTAAAGACCAACTCTACCAC+GGG - chr1.4:46739528-46739547 None:intergenic 40.0%
TTAATCTTGCTCACTGACAC+TGG - chr1.4:46739982-46740001 None:intergenic 40.0%
! GCTTTGGATTCGTCATTTAC+CGG + chr1.4:46739135-46739154 MS.gene42447:CDS 40.0%
! TTCTCAGTCTATGGGTTTTG+AGG + chr1.4:46739697-46739716 MS.gene42447:CDS 40.0%
! TTGTTGTTCTGATTATCCCG+TGG + chr1.4:46739509-46739528 MS.gene42447:CDS 40.0%
!! ATGATGTGCTATTTCGCTTG+AGG + chr1.4:46739412-46739431 MS.gene42447:CDS 40.0%
!! GGTAGAGTTGGTCTTTAATG+GGG + chr1.4:46739530-46739549 MS.gene42447:CDS 40.0%
!! GTGGTAGAGTTGGTCTTTAA+TGG + chr1.4:46739528-46739547 MS.gene42447:CDS 40.0%
!!! TCTATGGGTTTTGAGGTACA+AGG + chr1.4:46739704-46739723 MS.gene42447:CDS 40.0%
ACTTAACCGGTAACCTCAGT+AGG - chr1.4:46738969-46738988 None:intergenic 45.0%
ATTGGAACAAGCTACCACAC+TGG + chr1.4:46739855-46739874 MS.gene42447:CDS 45.0%
CCAAATCCTACTGAGGTTAC+CGG + chr1.4:46738960-46738979 MS.gene42447:CDS 45.0%
CGGTAACCTCAGTAGGATTT+GGG - chr1.4:46738962-46738981 None:intergenic 45.0%
TACCTATGGAATCCATCCAC+CGG + chr1.4:46739270-46739289 MS.gene42447:CDS 45.0%
TCTCATTGAGAGCTAATGCG+TGG + chr1.4:46739439-46739458 MS.gene42447:CDS 45.0%
TGATCACCCAAATCCTACTG+AGG + chr1.4:46738953-46738972 MS.gene42447:CDS 45.0%
TGATTATCCCGTGGTAGAGT+TGG + chr1.4:46739518-46739537 MS.gene42447:CDS 45.0%
AATGGGGGAAATGCGAGGAA+TGG - chr1.4:46739811-46739830 None:intergenic 50.0%
CAACAAATGGGGGAAATGCG+AGG - chr1.4:46739816-46739835 None:intergenic 50.0%
CCGGTAACCTCAGTAGGATT+TGG - chr1.4:46738963-46738982 None:intergenic 50.0%
GACCTCACTCCAAGGCAAAT+GGG - chr1.4:46739484-46739503 None:intergenic 50.0%
TACCCATTTGCCTTGGAGTG+AGG + chr1.4:46739479-46739498 MS.gene42447:CDS 50.0%
TCACTCCAAGGCAAATGGGT+AGG - chr1.4:46739480-46739499 None:intergenic 50.0%
TCATCAGGCAGATATGGTGG+TGG - chr1.4:46738931-46738950 None:intergenic 50.0%
TGAGTCCTACCCATTTGCCT+TGG + chr1.4:46739472-46739491 MS.gene42447:CDS 50.0%
TGTTTGTGAACTCCGGTGGA+TGG - chr1.4:46739285-46739304 None:intergenic 50.0%
GGACCTCACTCCAAGGCAAA+TGG - chr1.4:46739485-46739504 None:intergenic 55.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr1.4:46739275-46739294 None:intergenic 55.0%
CAAGACGGGACCTCACTCCA+AGG - chr1.4:46739492-46739511 None:intergenic 60.0%
!! GACGATGGCGGAGGCGGAGG+TGG + chr1.4:46738903-46738922 MS.gene42447:CDS 75.0%
!! GGAGACGATGGCGGAGGCGG+AGG + chr1.4:46738900-46738919 MS.gene42447:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 46738898 46740001 46738898 ID=MS.gene42447
chr1.4 mRNA 46738898 46740001 46738898 ID=MS.gene42447.t1;Parent=MS.gene42447
chr1.4 exon 46738898 46740001 46738898 ID=MS.gene42447.t1.exon1;Parent=MS.gene42447.t1
chr1.4 CDS 46738898 46740001 46738898 ID=cds.MS.gene42447.t1;Parent=MS.gene42447.t1
Gene Sequence

>MS.gene42447

ATGGAGACGATGGCGGAGGCGGAGGTGGATCCACCACCATATCTGCCTGATGAATTGATCACCCAAATCCTACTGAGGTTACCGGTTAAGTCTCTTATTCGTTTCAAATCCGTTTGTAAATCATGGTTTTCTCTTATTTCAAATCCTAGTTTTGCAAATTCACAGTTTCAGATTACTGCTGCAACACACACTCGTCGAATTCTGTTTGTAACAGAAACTTCTGAACTTCGATCCATAGCTTTGGATTCGTCATTTACCGGTAATTCTGCTCCTACTTTACTCAACCCTAATTTTGTTCACAAACTTGATTCACATATCAAAATTTTAGGTTCATGTAGAGGGTTCATATTTTTGTACTCTTATCCAAACATTTACCTATGGAATCCATCCACCGGAGTTCACAAACAAATACCTTATTACAATGGTTGTTCACGTTCAAATTTCTGTGGTTTTGGGTATGATGAGTCAAAAGACGATTACTTGGTAGTTTTATTATCCTATATTCCAAACTCAGATGATGTGCTATTTCGCTTGAGGATTTTCTCATTGAGAGCTAATGCGTGGATCAAAATTGTGAGTCCTACCCATTTGCCTTGGAGTGAGGTCCCGTCTTGTTGTTCTGATTATCCCGTGGTAGAGTTGGTCTTTAATGGGGCTATTCATTGGTTAGCTTTTCGTGATGAGATAGGTTTATTTGTTGCAGCCTTTCATTTAACAGAAAGGAAACTTCTAGAGATTTCTCTTCCAAATGATTTTGAATTTTGTTCTACAAATTATGGTTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTTGAGGTACAAGGATAGAGTTGATATATGGGTGATGAAAGAATACAAAGTGCAATCATCTTGGACTAAAACTCTTGTTCTCAGCATGGATACTACCATTCCTCGCATTTCCCCCATTTGTTGTACAAATAGTGGTGATATTATTGGAACAAGCTACCACACTGGATTGATTAGATATGATGACAACGGAGAGTTTCTAGAGCATACCTACTATTGTAAAGGTTCACGGCGTGTGTCTATTTATACTGAGTCTCTGCTTTCACTACCCAGTGTCAGTGAGCAAGATTAA
Protein sequence

>MS.gene42447.t1

METMAEAEVDPPPYLPDELITQILLRLPVKSLIRFKSVCKSWFSLISNPSFANSQFQITAATHTRRILFVTETSELRSIALDSSFTGNSAPTLLNPNFVHKLDSHIKILGSCRGFIFLYSYPNIYLWNPSTGVHKQIPYYNGCSRSNFCGFGYDESKDDYLVVLLSYIPNSDDVLFRLRIFSLRANAWIKIVSPTHLPWSEVPSCCSDYPVVELVFNGAIHWLAFRDEIGLFVAAFHLTERKLLEISLPNDFEFCSTNYGLWVFRGFLSLWVLRYKDRVDIWVMKEYKVQSSWTKTLVLSMDTTIPRISPICCTNSGDIIGTSYHTGLIRYDDNGEFLEHTYYCKGSRRVSIYTESLLSLPSVSEQD