AlfalfaGEDB | MS.gene88774

M. sativa cultivar XinJiangDaYe / MS.gene88774

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88774.t1	XP_003615612.1	89.6	269	28	0	10	278	117	385	5.70E-143	516.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88774.t1	Q9LIR8	29.7	195	123	6	17	206	114	299	1.2e-16	88.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88774.t1	G7K6D2	89.6	269	28	0	10	278	117	385	4.1e-143	516.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene88774	MS.gene035238	PPI
MS.gene88774	MS.gene85043	PPI
MS.gene57527	MS.gene88774	PPI
MS.gene88774	MS.gene064114	PPI
MS.gene51191	MS.gene88774	PPI
MS.gene88774	MS.gene87584	PPI
MS.gene88774	MS.gene062698	PPI
MS.gene033426	MS.gene88774	PPI
MS.gene033430	MS.gene88774	PPI
MS.gene88774	MS.gene80610	PPI
MS.gene50298	MS.gene88774	PPI
MS.gene67687	MS.gene88774	PPI
MS.gene88774	MS.gene90743	PPI
MS.gene88774	MS.gene85454	PPI
MS.gene71159	MS.gene88774	PPI
MS.gene96448	MS.gene88774	PPI
MS.gene88774	MS.gene041391	PPI
MS.gene88774	MS.gene033443	PPI
MS.gene058692	MS.gene88774	PPI
MS.gene041392	MS.gene88774	PPI
MS.gene88774	MS.gene57536	PPI
MS.gene69309	MS.gene88774	PPI
MS.gene63658	MS.gene88774	PPI
MS.gene033081	MS.gene88774	PPI
MS.gene88774	MS.gene51200	PPI
MS.gene88774	MS.gene058701	PPI
MS.gene034686	MS.gene88774	PPI
MS.gene88774	MS.gene87554	PPI
MS.gene88774	MS.gene009891	PPI
MS.gene88774	MS.gene064083	PPI
MS.gene88774	MS.gene27051	PPI
MS.gene40982	MS.gene88774	PPI
MS.gene070461	MS.gene88774	PPI
MS.gene51199	MS.gene88774	PPI
MS.gene88774	MS.gene048193	PPI
MS.gene88774	MS.gene58783	PPI
MS.gene88774	MS.gene024420	PPI
MS.gene88774	MS.gene016220	PPI
MS.gene88774	MS.gene024008	PPI
MS.gene88774	MS.gene50337	PPI
MS.gene87559	MS.gene88774	PPI
MS.gene88774	MS.gene54541	PPI
MS.gene88774	MS.gene39265	PPI
MS.gene88774	MS.gene060368	PPI
MS.gene88774	MS.gene053299	PPI
MS.gene88774	MS.gene28758	PPI
MS.gene88774	MS.gene044429	PPI
MS.gene041475	MS.gene88774	PPI
MS.gene64203	MS.gene88774	PPI
MS.gene88774	MS.gene48221	PPI
MS.gene060367	MS.gene88774	PPI
MS.gene44892	MS.gene88774	PPI
MS.gene51202	MS.gene88774	PPI
MS.gene88774	MS.gene58319	PPI
MS.gene88774	MS.gene034762	PPI
MS.gene88774	MS.gene59943	PPI
MS.gene064111	MS.gene88774	PPI
MS.gene26829	MS.gene88774	PPI
MS.gene064104	MS.gene88774	PPI
MS.gene88774	MS.gene033442	PPI
MS.gene053256	MS.gene88774	PPI
MS.gene75875	MS.gene88774	PPI
MS.gene54049	MS.gene88774	PPI
MS.gene43789	MS.gene88774	PPI
MS.gene88774	MS.gene40878	PPI
MS.gene88774	MS.gene44428	PPI
MS.gene88774	MS.gene96407	PPI
MS.gene006710	MS.gene88774	PPI
MS.gene88774	MS.gene035235	PPI
MS.gene072177	MS.gene88774	PPI
MS.gene58722	MS.gene88774	PPI
MS.gene88774	MS.gene058703	PPI
MS.gene88774	MS.gene024000	PPI
MS.gene88774	MS.gene012215	PPI
MS.gene43796	MS.gene88774	PPI
MS.gene58312	MS.gene88774	PPI
MS.gene88774	MS.gene033079	PPI
MS.gene36704	MS.gene88774	PPI
MS.gene88774	MS.gene059101	PPI
MS.gene88774	MS.gene58316	PPI
MS.gene88774	MS.gene033430	PPI
MS.gene58313	MS.gene88774	PPI
MS.gene88774	MS.gene58321	PPI
MS.gene88774	MS.gene87564	PPI
MS.gene88774	MS.gene58315	PPI
MS.gene88774	MS.gene36595	PPI
MS.gene066622	MS.gene88774	PPI
MS.gene44887	MS.gene88774	PPI
MS.gene63655	MS.gene88774	PPI
MS.gene44883	MS.gene88774	PPI
MS.gene88774	MS.gene045140	PPI
MS.gene036583	MS.gene88774	PPI
MS.gene88780	MS.gene88774	PPI
MS.gene41046	MS.gene88774	PPI
MS.gene88774	MS.gene041473	PPI
MS.gene87588	MS.gene88774	PPI
MS.gene017412	MS.gene88774	PPI
MS.gene88774	MS.gene50311	PPI
MS.gene80884	MS.gene88774	PPI
MS.gene88774	MS.gene064112	PPI
MS.gene88774	MS.gene058989	PPI
MS.gene88774	MS.gene036556	PPI
MS.gene88774	MS.gene57538	PPI
MS.gene88774	MS.gene041468	PPI
MS.gene51192	MS.gene88774	PPI
MS.gene009883	MS.gene88774	PPI
MS.gene88774	MS.gene060367	PPI
MS.gene88774	MS.gene058693	PPI
MS.gene88774	MS.gene27319	PPI
MS.gene88774	MS.gene041395	PPI
MS.gene044563	MS.gene88774	PPI
MS.gene069075	MS.gene88774	PPI
MS.gene40887	MS.gene88774	PPI
MS.gene033427	MS.gene88774	PPI
MS.gene88774	MS.gene51189	PPI
MS.gene40985	MS.gene88774	PPI
MS.gene031591	MS.gene88774	PPI
MS.gene041474	MS.gene88774	PPI
MS.gene88774	MS.gene046958	PPI
MS.gene88774	MS.gene24286	PPI
MS.gene041388	MS.gene88774	PPI
MS.gene062698	MS.gene88774	PPI
MS.gene57536	MS.gene88774	PPI
MS.gene96126	MS.gene88774	PPI
MS.gene019503	MS.gene88774	PPI
MS.gene51208	MS.gene88774	PPI
MS.gene88774	MS.gene40988	PPI
MS.gene016524	MS.gene88774	PPI
MS.gene50304	MS.gene88774	PPI
MS.gene88774	MS.gene24173	PPI
MS.gene88774	MS.gene036584	PPI
MS.gene88774	MS.gene036662	PPI
MS.gene88774	MS.gene42451	PPI
MS.gene51204	MS.gene88774	PPI
MS.gene31587	MS.gene88774	PPI
MS.gene036557	MS.gene88774	PPI
MS.gene041393	MS.gene88774	PPI
MS.gene033441	MS.gene88774	PPI
MS.gene88774	MS.gene035261	PPI
MS.gene88774	MS.gene023999	PPI
MS.gene88774	MS.gene69307	PPI
MS.gene063826	MS.gene88774	PPI
MS.gene84698	MS.gene88774	PPI
MS.gene88774	MS.gene036581	PPI
MS.gene88774	MS.gene019507	PPI
MS.gene88774	MS.gene033431	PPI
MS.gene58239	MS.gene88774	PPI
MS.gene066641	MS.gene88774	PPI
MS.gene82082	MS.gene88774	PPI
MS.gene88774	MS.gene000036	PPI
MS.gene000038	MS.gene88774	PPI
MS.gene88774	MS.gene50320	PPI
MS.gene57531	MS.gene88774	PPI
MS.gene88774	MS.gene58314	PPI
MS.gene88774	MS.gene87557	PPI
MS.gene88774	MS.gene51199	PPI
MS.gene88774	MS.gene035263	PPI
MS.gene39262	MS.gene88774	PPI
MS.gene88774	MS.gene67501	PPI
MS.gene88774	MS.gene96406	PPI
MS.gene88774	MS.gene27285	PPI
MS.gene57535	MS.gene88774	PPI
MS.gene025887	MS.gene88774	PPI
MS.gene88774	MS.gene035262	PPI
MS.gene041470	MS.gene88774	PPI
MS.gene058694	MS.gene88774	PPI
MS.gene88774	MS.gene028390	PPI
MS.gene88774	MS.gene50336	PPI
MS.gene015089	MS.gene88774	PPI
MS.gene44885	MS.gene88774	PPI
MS.gene011679	MS.gene88774	PPI
MS.gene88774	MS.gene047279	PPI
MS.gene88774	MS.gene060370	PPI
MS.gene88774	MS.gene50305	PPI
MS.gene060370	MS.gene88774	PPI
MS.gene88774	MS.gene024002	PPI
MS.gene88774	MS.gene032969	PPI
MS.gene64001	MS.gene88774	PPI
MS.gene57533	MS.gene88774	PPI
MS.gene88774	MS.gene68890	PPI
MS.gene88774	MS.gene50297	PPI
MS.gene032970	MS.gene88774	PPI
MS.gene88774	MS.gene42445	PPI
MS.gene88774	MS.gene86273	PPI
MS.gene87586	MS.gene88774	PPI
MS.gene88774	MS.gene26830	PPI
MS.gene88774	MS.gene40985	PPI
MS.gene88774	MS.gene22715	PPI
MS.gene77856	MS.gene88774	PPI
MS.gene88774	MS.gene038756	PPI
MS.gene88774	MS.gene51207	PPI
MS.gene88774	MS.gene63657	PPI
MS.gene88774	MS.gene059157	PPI
MS.gene50339	MS.gene88774	PPI
MS.gene88774	MS.gene024004	PPI
MS.gene060366	MS.gene88774	PPI
MS.gene88774	MS.gene070462	PPI
MS.gene88774	MS.gene061240	PPI
MS.gene88774	MS.gene031590	PPI
MS.gene57529	MS.gene88774	PPI
MS.gene88774	MS.gene064086	PPI
MS.gene88774	MS.gene035234	PPI
MS.gene88774	MS.gene064090	PPI
MS.gene40902	MS.gene88774	PPI
MS.gene88774	MS.gene066639	PPI
MS.gene88774	MS.gene50332	PPI
MS.gene88774	MS.gene42447	PPI
MS.gene88774	MS.gene024979	PPI
MS.gene033875	MS.gene88774	PPI
MS.gene27020	MS.gene88774	PPI
MS.gene066620	MS.gene88774	PPI
MS.gene035236	MS.gene88774	PPI
MS.gene88774	MS.gene24826	PPI
MS.gene88774	MS.gene044425	PPI
MS.gene88774	MS.gene43790	PPI
MS.gene58781	MS.gene88774	PPI
MS.gene011106	MS.gene88774	PPI
MS.gene62398	MS.gene88774	PPI
MS.gene60027	MS.gene88774	PPI
MS.gene88774	MS.gene59637	PPI
MS.gene045475	MS.gene88774	PPI
MS.gene038756	MS.gene88774	PPI
MS.gene88776	MS.gene88774	PPI
MS.gene88774	MS.gene27022	PPI
MS.gene88774	MS.gene57530	PPI
MS.gene35068	MS.gene88774	PPI
MS.gene041390	MS.gene88774	PPI
MS.gene90744	MS.gene88774	PPI
MS.gene92376	MS.gene88774	PPI
MS.gene000035	MS.gene88774	PPI
MS.gene50329	MS.gene88774	PPI
MS.gene88774	MS.gene87585	PPI
MS.gene31637	MS.gene88774	PPI
MS.gene87573	MS.gene88774	PPI
MS.gene88774	MS.gene024009	PPI
MS.gene88774	MS.gene036599	PPI
MS.gene88774	MS.gene40887	PPI
MS.gene019504	MS.gene88774	PPI
MS.gene88774	MS.gene006705	PPI
MS.gene059156	MS.gene88774	PPI
MS.gene88774	MS.gene061241	PPI
MS.gene88774	MS.gene035237	PPI
MS.gene88774	MS.gene51188	PPI
MS.gene57537	MS.gene88774	PPI
MS.gene033444	MS.gene88774	PPI
MS.gene50306	MS.gene88774	PPI
MS.gene88774	MS.gene50309	PPI
MS.gene88774	MS.gene041394	PPI
MS.gene88774	MS.gene03060	PPI
MS.gene066639	MS.gene88774	PPI
MS.gene26949	MS.gene88774	PPI
MS.gene88774	MS.gene036664	PPI
MS.gene88774	MS.gene024011	PPI
MS.gene88774	MS.gene053257	PPI
MS.gene88774	MS.gene58241	PPI
MS.gene88774	MS.gene77858	PPI
MS.gene88774	MS.gene51201	PPI
MS.gene036760	MS.gene88774	PPI
MS.gene88774	MS.gene064109	PPI
MS.gene88774	MS.gene058696	PPI
MS.gene88774	MS.gene009893	PPI
MS.gene87200	MS.gene88774	PPI
MS.gene58311	MS.gene88774	PPI
MS.gene033432	MS.gene88774	PPI
MS.gene88774	MS.gene77704	PPI
MS.gene59639	MS.gene88774	PPI
MS.gene88774	MS.gene033083	PPI
MS.gene066635	MS.gene88774	PPI
MS.gene88774	MS.gene40886	PPI
MS.gene010758	MS.gene88774	PPI
MS.gene063670	MS.gene88774	PPI
MS.gene88774	MS.gene036663	PPI
MS.gene88774	MS.gene68580	PPI
MS.gene019506	MS.gene88774	PPI
MS.gene50326	MS.gene88774	PPI
MS.gene88774	MS.gene57525	PPI
MS.gene51200	MS.gene88774	PPI
MS.gene88774	MS.gene023996	PPI
MS.gene88774	MS.gene030114	PPI
MS.gene024002	MS.gene88774	PPI
MS.gene88774	MS.gene045473	PPI
MS.gene88774	MS.gene50301	PPI
MS.gene88774	MS.gene045474	PPI
MS.gene88774	MS.gene036558	PPI
MS.gene42452	MS.gene88774	PPI
MS.gene88774	MS.gene40984	PPI
MS.gene88774	MS.gene066623	PPI
MS.gene88774	MS.gene064108	PPI
MS.gene063414	MS.gene88774	PPI
MS.gene88774	MS.gene24208	PPI
MS.gene88774	MS.gene58317	PPI
MS.gene88774	MS.gene90742	PPI
MS.gene87563	MS.gene88774	PPI
MS.gene88774	MS.gene24212	PPI
MS.gene57526	MS.gene88774	PPI
MS.gene021553	MS.gene88774	PPI
MS.gene051820	MS.gene88774	PPI
MS.gene26957	MS.gene88774	PPI
MS.gene97996	MS.gene88774	PPI
MS.gene88774	MS.gene58240	PPI
MS.gene036582	MS.gene88774	PPI
MS.gene27021	MS.gene88774	PPI
MS.gene88774	MS.gene27284	PPI
MS.gene58320	MS.gene88774	PPI
MS.gene81242	MS.gene88774	PPI
MS.gene88774	MS.gene063472	PPI
MS.gene26101	MS.gene88774	PPI
MS.gene27283	MS.gene88774	PPI
MS.gene88774	MS.gene57717	PPI
MS.gene88774	MS.gene034680	PPI
MS.gene88774	MS.gene044563	PPI
MS.gene42444	MS.gene88774	PPI
MS.gene88774	MS.gene50327	PPI
MS.gene88774	MS.gene066626	PPI
MS.gene88774	MS.gene40982	PPI
MS.gene44886	MS.gene88774	PPI
MS.gene87562	MS.gene88774	PPI
MS.gene88774	MS.gene063474	PPI
MS.gene88774	MS.gene51190	PPI
MS.gene40904	MS.gene88774	PPI
MS.gene88774	MS.gene044426	PPI
MS.gene88774	MS.gene88416	PPI
MS.gene88774	MS.gene034681	PPI
MS.gene88774	MS.gene57532	PPI
MS.gene88774	MS.gene003076	PPI
MS.gene87569	MS.gene88774	PPI
MS.gene041491	MS.gene88774	PPI
MS.gene88774	MS.gene009892	PPI
MS.gene059096	MS.gene88774	PPI
MS.gene57528	MS.gene88774	PPI
MS.gene88774	MS.gene058669	PPI
MS.gene88774	MS.gene066120	PPI
MS.gene88774	MS.gene51192	PPI
MS.gene50297	MS.gene88774	PPI
MS.gene88774	MS.gene033875	PPI
MS.gene006711	MS.gene88774	PPI
MS.gene27285	MS.gene88774	PPI
MS.gene58716	MS.gene88774	PPI
MS.gene064091	MS.gene88774	PPI
MS.gene88774	MS.gene041489	PPI
MS.gene019505	MS.gene88774	PPI
MS.gene064112	MS.gene88774	PPI
MS.gene88774	MS.gene38220	PPI
MS.gene88774	MS.gene40986	PPI
MS.gene045476	MS.gene88774	PPI
MS.gene58785	MS.gene88774	PPI
MS.gene24208	MS.gene88774	PPI
MS.gene88774	MS.gene034688	PPI
MS.gene50307	MS.gene88774	PPI
MS.gene034690	MS.gene88774	PPI
MS.gene88774	MS.gene24213	PPI
MS.gene88774	MS.gene033440	PPI
MS.gene96407	MS.gene88774	PPI
MS.gene88774	MS.gene034677	PPI
MS.gene88774	MS.gene055694	PPI
MS.gene77857	MS.gene88774	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88774.t1	MTR_5g070080	88.686	274	31	0	6	279	113	386	2.46e-180	501
MS.gene88774.t1	MTR_5g070088	68.345	278	82	5	6	279	111	386	3.03e-128	370
MS.gene88774.t1	MTR_5g070130	62.847	288	96	5	1	279	92	377	2.04e-118	345
MS.gene88774.t1	MTR_4g117720	56.338	284	109	8	6	279	100	378	5.47e-95	285
MS.gene88774.t1	MTR_3g103020	54.965	282	121	5	1	279	100	378	1.64e-91	276
MS.gene88774.t1	MTR_5g097210	53.597	278	114	9	2	273	90	358	1.43e-83	255
MS.gene88774.t1	MTR_6g060650	52.593	270	119	6	13	278	108	372	4.47e-83	254
MS.gene88774.t1	MTR_3g034180	50.000	292	126	7	1	279	205	489	1.16e-81	254
MS.gene88774.t1	MTR_3g034160	51.379	290	120	8	1	276	91	373	1.33e-79	245
MS.gene88774.t1	MTR_1g055135	53.004	283	115	10	2	273	95	370	2.90e-79	244
MS.gene88774.t1	MTR_4g109280	51.418	282	128	6	1	279	84	359	5.08e-79	243
MS.gene88774.t1	MTR_1g055195	51.079	278	110	8	12	279	218	479	1.13e-78	246
MS.gene88774.t1	MTR_4g023080	50.000	276	124	7	1	275	89	351	1.57e-76	237
MS.gene88774.t1	MTR_4g023090	46.980	298	131	9	1	279	97	386	1.98e-76	238
MS.gene88774.t1	MTR_4g109270	50.173	289	121	8	1	279	89	364	2.04e-76	237
MS.gene88774.t1	MTR_4g094365	48.070	285	134	9	1	279	88	364	4.49e-75	233
MS.gene88774.t1	MTR_3g034130	49.640	278	120	7	1	264	91	362	1.14e-74	233
MS.gene88774.t1	MTR_4g023130	50.775	258	114	6	19	275	65	310	3.53e-72	224
MS.gene88774.t1	MTR_4g117750	50.903	277	115	8	10	273	86	354	6.54e-72	229
MS.gene88774.t1	MTR_4g117750	48.837	129	57	2	154	273	350	478	5.17e-25	103
MS.gene88774.t1	MTR_4g117850	49.813	267	123	5	12	271	111	373	1.51e-71	224
MS.gene88774.t1	MTR_4g122850	47.163	282	135	10	1	273	83	359	2.56e-71	224
MS.gene88774.t1	MTR_4g118380	49.416	257	113	6	8	251	105	357	3.33e-70	221
MS.gene88774.t1	MTR_4g023380	46.000	300	111	10	8	279	103	379	8.36e-69	218
MS.gene88774.t1	MTR_4g116330	48.864	264	123	7	17	275	121	377	1.89e-68	217
MS.gene88774.t1	MTR_4g021785	48.134	268	125	8	10	275	97	352	5.67e-68	215
MS.gene88774.t1	MTR_8g032390	47.636	275	129	8	10	274	102	371	1.31e-67	214
MS.gene88774.t1	MTR_8g433040	46.763	278	126	9	8	279	103	364	7.16e-67	212
MS.gene88774.t1	MTR_8g032380	46.763	278	126	9	8	279	103	364	7.16e-67	212
MS.gene88774.t1	MTR_4g117770	47.535	284	138	7	1	279	90	367	8.94e-67	212
MS.gene88774.t1	MTR_4g117810	47.535	284	138	7	1	279	90	367	8.94e-67	212
MS.gene88774.t1	MTR_4g023190	46.429	280	132	9	1	275	90	356	1.63e-66	211
MS.gene88774.t1	MTR_4g118370	49.597	248	94	7	32	273	33	255	2.41e-66	207
MS.gene88774.t1	MTR_4g023120	46.259	294	124	11	4	275	86	367	2.94e-66	211
MS.gene88774.t1	MTR_4g023070	46.259	294	124	11	4	275	86	367	4.09e-66	211
MS.gene88774.t1	MTR_4g117780	46.831	284	140	7	1	279	90	367	7.79e-66	210
MS.gene88774.t1	MTR_4g023150	45.907	281	133	10	1	275	90	357	4.67e-65	207
MS.gene88774.t1	MTR_4g023200	44.643	280	138	8	1	275	90	357	9.64e-63	201
MS.gene88774.t1	MTR_4g117870	43.956	273	113	7	8	279	34	267	7.14e-61	194
MS.gene88774.t1	MTR_8g433030	52.511	219	94	6	61	274	125	338	4.36e-60	194
MS.gene88774.t1	MTR_4g023440	45.745	282	101	11	1	279	100	332	4.82e-60	194
MS.gene88774.t1	MTR_4g118400	44.569	267	117	8	7	272	58	294	9.98e-59	189
MS.gene88774.t1	MTR_4g116320	53.271	214	92	5	65	273	43	253	1.69e-58	187
MS.gene88774.t1	MTR_1g055165	42.652	279	105	7	2	278	93	318	4.22e-58	188
MS.gene88774.t1	MTR_1g055175	52.041	196	87	5	88	278	8	201	1.74e-56	180
MS.gene88774.t1	MTR_7g079400	45.357	280	128	11	15	279	68	337	2.96e-56	184
MS.gene88774.t1	MTR_7g079370	44.086	279	133	11	14	274	79	352	6.78e-55	181
MS.gene88774.t1	MTR_8g102520	44.664	253	124	9	31	274	73	318	8.54e-55	180
MS.gene88774.t1	MTR_1g055250	50.000	210	90	6	54	252	37	242	1.32e-54	179
MS.gene88774.t1	MTR_4g121580	45.693	267	105	10	10	268	105	339	1.35e-53	179
MS.gene88774.t1	MTR_6g463430	49.038	208	96	5	76	279	1	202	1.63e-49	162
MS.gene88774.t1	MTR_8g040935	47.368	209	104	4	76	279	1	208	3.36e-48	159
MS.gene88774.t1	MTR_4g116330	42.045	264	102	8	17	275	121	338	1.91e-47	161
MS.gene88774.t1	MTR_8g013010	50.276	181	80	5	1	178	136	309	1.34e-46	159
MS.gene88774.t1	MTR_2g048580	38.652	282	134	16	1	274	88	338	7.28e-42	147
MS.gene88774.t1	MTR_7g079420	37.687	268	123	9	19	274	905	1140	7.35e-42	153
MS.gene88774.t1	MTR_4g117530	38.462	273	115	9	6	273	24	248	3.73e-41	142
MS.gene88774.t1	MTR_4g117430	49.057	159	72	3	20	178	3	152	7.20e-40	136
MS.gene88774.t1	MTR_4g114700	39.924	263	99	9	16	269	6	218	2.24e-38	135
MS.gene88774.t1	MTR_8g098830	44.318	176	84	5	77	247	28	194	4.44e-35	126
MS.gene88774.t1	MTR_4g118360	55.645	124	46	6	154	272	1	120	2.52e-32	115
MS.gene88774.t1	MTR_4g116340	46.763	139	64	4	13	144	112	247	1.33e-30	115
MS.gene88774.t1	MTR_7g079450	48.201	139	64	5	138	274	1	133	1.04e-29	109
MS.gene88774.t1	MTR_5g023000	59.574	94	36	2	187	279	7	99	2.94e-28	104
MS.gene88774.t1	MTR_4g122860	34.862	218	105	4	59	272	130	314	2.81e-26	105
MS.gene88774.t1	MTR_7g117720	56.075	107	39	4	175	273	166	272	2.32e-24	99.4
MS.gene88774.t1	MTR_7g117720	51.546	97	42	3	13	105	85	180	4.42e-22	93.2
MS.gene88774.t1	MTR_6g034720	44.167	120	59	4	43	156	53	170	3.26e-20	86.7
MS.gene88774.t1	MTR_2g026010	31.390	223	133	9	17	220	90	311	3.68e-20	89.7
MS.gene88774.t1	MTR_4g070550	31.799	239	119	12	13	216	97	326	1.64e-19	87.8
MS.gene88774.t1	MTR_2g025960	29.954	217	121	8	17	208	5	215	1.70e-19	86.7
MS.gene88774.t1	MTR_1g055200	51.190	84	36	2	16	97	5	85	8.12e-19	80.1
MS.gene88774.t1	MTR_1g068835	28.910	211	131	8	13	209	87	292	3.51e-18	84.0
MS.gene88774.t1	MTR_3g036290	33.168	202	106	10	14	209	116	294	4.68e-18	83.2
MS.gene88774.t1	MTR_4g028510	26.882	279	149	11	33	273	139	400	5.22e-18	84.0
MS.gene88774.t1	MTR_2g028140	28.936	235	122	9	17	216	107	331	9.32e-18	82.8
MS.gene88774.t1	MTR_2g031720	28.626	262	165	9	3	245	82	340	1.00e-17	82.8
MS.gene88774.t1	MTR_5g011200	28.151	238	141	10	17	247	117	331	1.12e-17	82.4
MS.gene88774.t1	MTR_0667s0010	28.571	224	127	9	12	208	89	306	3.90e-17	80.9
MS.gene88774.t1	MTR_0054s0090	26.259	278	163	9	30	273	135	404	4.77e-17	80.9
MS.gene88774.t1	MTR_4g023430	54.217	83	33	3	201	279	141	222	5.45e-17	78.2
MS.gene88774.t1	MTR_4g133170	27.619	210	132	8	13	208	86	289	7.94e-17	80.1
MS.gene88774.t1	MTR_2g028130	29.339	242	123	11	13	220	102	329	9.59e-17	79.7
MS.gene88774.t1	MTR_2g031640	28.516	256	155	10	1	235	76	324	1.14e-16	79.3
MS.gene88774.t1	MTR_2g426090	29.237	236	134	11	12	220	95	324	1.35e-16	79.3
MS.gene88774.t1	MTR_2g426070	29.565	230	129	9	17	220	105	327	2.46e-16	78.6
MS.gene88774.t1	MTR_1g068875	26.809	235	150	9	12	230	86	314	2.52e-16	78.6
MS.gene88774.t1	MTR_1g068860	29.577	213	129	8	13	209	87	294	3.30e-16	78.2
MS.gene88774.t1	MTR_2g078870	28.272	191	115	7	19	204	59	232	3.52e-16	77.4
MS.gene88774.t1	MTR_4g122840	40.714	140	37	4	146	279	165	264	6.25e-16	75.9
MS.gene88774.t1	MTR_4g130330	28.800	250	141	11	1	215	88	335	6.43e-16	77.4
MS.gene88774.t1	MTR_6g090180	25.556	270	168	7	30	271	170	434	9.03e-16	77.0
MS.gene88774.t1	MTR_2g024100	29.258	229	121	10	8	204	87	306	1.11e-15	76.6
MS.gene88774.t1	MTR_3g007410	28.745	247	148	11	2	237	135	364	1.61e-15	76.3
MS.gene88774.t1	MTR_5g057790	28.910	211	127	10	17	218	142	338	1.65e-15	76.3
MS.gene88774.t1	MTR_3g007360	27.957	279	170	12	8	271	141	403	1.86e-15	76.3
MS.gene88774.t1	MTR_4g061340	28.182	220	121	7	12	210	114	317	2.16e-15	75.9
MS.gene88774.t1	MTR_6g021880	28.571	224	139	9	7	220	116	328	2.68e-15	75.5
MS.gene88774.t1	MTR_2g021050	29.907	214	113	10	13	208	91	285	7.81e-15	74.3
MS.gene88774.t1	MTR_6g080680	25.095	263	158	9	33	270	142	390	8.82e-15	73.9
MS.gene88774.t1	MTR_1g097490	26.812	276	179	11	1	270	132	390	8.96e-15	73.9
MS.gene88774.t1	MTR_0054s0100	24.739	287	164	9	26	273	133	406	1.04e-14	73.9
MS.gene88774.t1	MTR_2g426060	28.685	251	135	13	4	220	86	326	1.30e-14	73.6
MS.gene88774.t1	MTR_5g097680	25.177	282	171	10	25	273	151	425	1.48e-14	73.6
MS.gene88774.t1	MTR_1g055145	52.055	73	33	2	120	192	129	199	3.63e-14	71.2
MS.gene88774.t1	MTR_5g057710	28.774	212	128	10	17	218	142	340	4.50e-14	72.0
MS.gene88774.t1	MTR_3g083010	28.636	220	115	8	17	204	108	317	7.71e-14	71.2
MS.gene88774.t1	MTR_8g046200	25.170	294	170	9	24	275	137	422	7.81e-14	71.2
MS.gene88774.t1	MTR_7g079640	26.639	244	151	8	24	254	127	355	8.98e-14	70.9
MS.gene88774.t1	MTR_5g096910	23.864	264	171	9	25	273	143	391	1.00e-13	70.9
MS.gene88774.t1	MTR_2g028110	30.357	224	128	9	12	212	85	303	2.00e-13	70.1
MS.gene88774.t1	MTR_6g078010	24.000	300	177	11	1	269	50	329	2.18e-13	69.7
MS.gene88774.t1	MTR_7g017130	25.180	278	157	13	31	278	142	398	3.52e-13	69.3
MS.gene88774.t1	MTR_2g021150	26.457	223	150	7	15	230	113	328	3.71e-13	69.3
MS.gene88774.t1	MTR_0129s0050	24.915	293	173	10	24	276	124	409	3.91e-13	69.3
MS.gene88774.t1	MTR_4g028660	22.997	287	154	12	28	271	133	395	4.92e-13	68.9
MS.gene88774.t1	MTR_4g027450	22.997	287	154	12	28	271	133	395	4.92e-13	68.9
MS.gene88774.t1	MTR_5g043605	26.165	279	175	12	13	274	72	336	5.03e-13	68.9
MS.gene88774.t1	MTR_5g069120	43.158	95	43	3	14	97	83	177	5.30e-13	66.2
MS.gene88774.t1	MTR_2g031680	27.488	211	133	8	13	208	87	292	6.54e-13	68.6
MS.gene88774.t1	MTR_5g037680	23.438	256	174	9	26	270	137	381	6.79e-13	68.6
MS.gene88774.t1	MTR_1g094210	27.165	254	149	13	15	254	152	383	8.35e-13	68.2
MS.gene88774.t1	MTR_6g053240	25.926	216	139	8	15	218	125	331	8.94e-13	68.2
MS.gene88774.t1	MTR_0128s0020	25.660	265	154	12	15	251	118	367	8.97e-13	68.2
MS.gene88774.t1	MTR_6g053260	26.761	213	138	8	14	218	433	635	9.89e-13	68.6
MS.gene88774.t1	MTR_1g094210	28.019	207	118	11	15	212	152	336	1.11e-12	67.8
MS.gene88774.t1	MTR_2g078900	26.562	192	119	7	19	204	134	309	1.65e-12	67.0
MS.gene88774.t1	MTR_3g006670	25.403	248	158	8	6	242	135	366	1.87e-12	67.4
MS.gene88774.t1	MTR_2g021155	29.832	238	144	12	17	241	130	357	2.12e-12	67.4
MS.gene88774.t1	MTR_2g021155	26.360	239	150	11	13	237	689	915	2.98e-12	67.0
MS.gene88774.t1	MTR_6g048120	26.442	208	131	10	17	213	139	335	2.48e-12	67.0
MS.gene88774.t1	MTR_8g013005	64.706	51	17	1	224	273	4	54	2.72e-12	60.8
MS.gene88774.t1	MTR_3g009310	28.272	191	116	7	25	209	152	327	3.17e-12	66.6
MS.gene88774.t1	MTR_6g017305	25.279	269	172	10	30	270	14	281	3.49e-12	65.5
MS.gene88774.t1	MTR_5g086590	29.208	202	120	11	25	214	8	198	3.51e-12	65.1
MS.gene88774.t1	MTR_7g007300	25.424	236	141	10	17	246	205	411	3.68e-12	66.6
MS.gene88774.t1	MTR_3g030250	27.500	200	119	8	13	208	133	310	4.47e-12	65.9
MS.gene88774.t1	MTR_3g009240	26.842	190	124	5	25	210	140	318	4.85e-12	65.9
MS.gene88774.t1	MTR_2g055970	28.283	198	132	5	15	208	305	496	5.12e-12	66.2
MS.gene88774.t1	MTR_7g017170	25.214	234	134	10	31	242	142	356	5.46e-12	65.9
MS.gene88774.t1	MTR_2g426020	25.681	257	148	9	17	243	100	343	6.91e-12	65.5
MS.gene88774.t1	MTR_1g058190	26.695	236	149	8	23	246	113	336	7.35e-12	65.5
MS.gene88774.t1	MTR_8g101580	24.303	251	171	6	2	240	119	362	8.58e-12	65.1
MS.gene88774.t1	MTR_2g021770	25.641	273	171	9	29	273	137	405	9.85e-12	65.1
MS.gene88774.t1	MTR_5g007610	27.240	279	169	13	15	270	133	400	1.27e-11	64.7
MS.gene88774.t1	MTR_3g007330	25.000	208	135	6	17	214	137	333	1.53e-11	64.3
MS.gene88774.t1	MTR_3g014540	25.651	269	171	12	17	270	123	377	1.57e-11	64.3
MS.gene88774.t1	MTR_8g099460	27.273	220	131	9	12	208	88	301	1.78e-11	64.3
MS.gene88774.t1	MTR_4g129190	25.957	235	134	9	11	215	95	319	2.48e-11	63.9
MS.gene88774.t1	MTR_1g097560	26.172	256	157	12	1	246	119	352	2.54e-11	63.5
MS.gene88774.t1	MTR_5g046300	25.758	198	128	8	19	210	101	285	2.54e-11	63.5
MS.gene88774.t1	MTR_5g046290	25.758	198	128	8	19	210	101	285	2.54e-11	63.5
MS.gene88774.t1	MTR_2g104280	25.714	315	184	15	1	273	97	403	2.98e-11	63.5
MS.gene88774.t1	MTR_4g028680	25.676	222	121	9	28	215	134	345	3.64e-11	63.2
MS.gene88774.t1	MTR_5g022040	27.660	235	125	13	9	211	176	397	3.69e-11	63.5
MS.gene88774.t1	MTR_5g057690	26.761	213	123	9	15	218	140	328	4.00e-11	63.2
MS.gene88774.t1	MTR_3g009260	28.497	193	111	7	27	210	146	320	4.09e-11	63.2
MS.gene88774.t1	MTR_4g014370	23.529	289	172	10	22	276	137	410	4.77e-11	63.2
MS.gene88774.t1	MTR_3g007430	28.169	213	128	11	10	208	127	328	4.99e-11	62.8
MS.gene88774.t1	MTR_6g065510	25.604	207	128	8	25	215	67	263	5.20e-11	62.8
MS.gene88774.t1	MTR_6g478230	24.281	313	175	14	2	273	114	405	6.11e-11	62.8
MS.gene88774.t1	MTR_3g023930	30.526	190	102	9	19	204	131	294	6.52e-11	62.4
MS.gene88774.t1	MTR_3g013740	26.201	229	143	8	5	216	131	350	6.62e-11	62.8
MS.gene88774.t1	MTR_2g029990	23.134	268	181	11	15	270	148	402	6.64e-11	62.4
MS.gene88774.t1	MTR_3g006500	28.033	239	128	11	13	240	121	326	6.80e-11	62.4
MS.gene88774.t1	MTR_7g407070	28.216	241	145	11	17	240	135	364	7.63e-11	62.4
MS.gene88774.t1	MTR_2g046830	30.455	220	130	13	1	213	110	313	9.05e-11	62.0
MS.gene88774.t1	MTR_4g109290	50.000	66	28	2	11	76	75	135	9.88e-11	60.1
MS.gene88774.t1	MTR_0064s0160	24.658	292	192	11	3	274	139	422	9.91e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88774.t1	AT4G12560	29.630	216	131	8	14	209	90	304	1.12e-16	79.7
MS.gene88774.t1	AT4G12560	29.630	216	131	8	14	209	90	304	1.12e-16	79.7
MS.gene88774.t1	AT4G12560	29.630	216	131	8	14	209	90	304	1.12e-16	79.7
MS.gene88774.t1	AT3G06240	28.713	202	130	8	13	207	163	357	6.50e-16	77.4
MS.gene88774.t1	AT3G23880	29.648	199	124	6	14	206	111	299	4.72e-13	68.9
MS.gene88774.t1	AT3G07870	29.032	217	122	11	12	204	116	324	1.63e-12	67.4

Find 71 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAATTATTTCTATGGTTT+TGG	0.152964	5.4:+55016103	MS.gene88774:CDS
GTTCCAGAGTGTATGATTTA+TGG	0.171088	5.4:+55016425	MS.gene88774:CDS
TATTGTTGGATTTCATTTAA+TGG	0.189014	5.4:+55016357	MS.gene88774:CDS
AAGACTCTTGTTCTTTCTTT+TGG	0.207374	5.4:+55016547	MS.gene88774:CDS
GTTATTCAAGCCTTTATCTA+TGG	0.251337	5.4:+55016017	MS.gene88774:CDS
AGAGTAGAGTCGCTATTAAA+TGG	0.261111	5.4:+55016289	MS.gene88774:CDS
TTAGAAGCAAATTATTTCTA+TGG	0.288587	5.4:+55016097	MS.gene88774:CDS
TTTATAGATCTTGATATTAG+AGG	0.291130	5.4:+55015965	MS.gene88774:CDS
TCCTACTCGGACCATGAATA+TGG	0.294895	5.4:+55016688	MS.gene88774:CDS
TTGCCAGATGGTATAAATAA+TGG	0.302323	5.4:+55016403	MS.gene88774:CDS
GAATCTCTGCTTTCACTTCC+CGG	0.307927	5.4:+55016733	MS.gene88774:CDS
TATGATTTATGGGTATTTAG+AGG	0.334732	5.4:+55016436	MS.gene88774:CDS
TGGAATATGTGGCGTGATAA+AGG	0.350876	5.4:+55016472	MS.gene88774:CDS
TAGATAAAGGCTTGAATAAC+CGG	0.360813	5.4:-55016014	None:intergenic
GAAATAATTTGCTTCTAAAT+CGG	0.363111	5.4:-55016092	None:intergenic
TTCCAGAGTGTATGATTTAT+GGG	0.367996	5.4:+55016426	MS.gene88774:CDS
TTGGCCAAGTATAATGATAA+AGG	0.374960	5.4:+55016646	MS.gene88774:CDS
TTAGAGGATGTCTCAGTCTA+TGG	0.381600	5.4:+55016452	MS.gene88774:CDS
TATTAAATGGGGTTATTCAC+TGG	0.396592	5.4:+55016302	MS.gene88774:CDS
CTGTCCTTTATCATTATACT+TGG	0.401300	5.4:-55016650	None:intergenic
GGATGGTTTGTTATCTCACT+TGG	0.402063	5.4:+55016183	MS.gene88774:CDS
GAGTAGAGTCGCTATTAAAT+GGG	0.413688	5.4:+55016290	MS.gene88774:CDS
TCCCGGTGGTGACGGTGATC+AGG	0.418651	5.4:+55016750	MS.gene88774:CDS
AGATCAATGAATGTTATTGT+TGG	0.422430	5.4:+55016343	MS.gene88774:CDS
ATAAAGGTACAATTGACATA+TGG	0.438139	5.4:+55016488	MS.gene88774:CDS
TGGATGGATTCCATAGATAA+AGG	0.442360	5.4:-55016027	None:intergenic
GATGGTTTGTTATCTCACTT+GGG	0.458000	5.4:+55016184	MS.gene88774:CDS
TTGGATTTCATTTAATGGAA+AGG	0.463172	5.4:+55016362	MS.gene88774:CDS
CCACTAGGGATCCATATTCA+TGG	0.468667	5.4:-55016699	None:intergenic
TTTCGGGCAAAAGTAGTGAA+TGG	0.469610	5.4:-55016578	None:intergenic
CTTTCACTTCCCGGTGGTGA+CGG	0.473853	5.4:+55016742	MS.gene88774:CDS
CCGAAATATTGTACGAAAAG+TGG	0.476068	5.4:+55016595	MS.gene88774:CDS
TTCGGGCAAAAGTAGTGAAT+GGG	0.480110	5.4:-55016577	None:intergenic
GAACCATTATTTATACCATC+TGG	0.482255	5.4:-55016406	None:intergenic
AATACAATGTGCAATCGTCT+TGG	0.487961	5.4:+55016521	MS.gene88774:CDS
GGAATCATGAACAGTAGTAA+AGG	0.490153	5.4:-55016071	None:intergenic
GAATCATGAACAGTAGTAAA+GGG	0.494070	5.4:-55016070	None:intergenic
AAATGGGGTTATTCACTGGT+TGG	0.500924	5.4:+55016306	MS.gene88774:CDS
AACCTGATCACCGTCACCAC+CGG	0.504784	5.4:-55016752	None:intergenic
TAAAGGTACAATTGACATAT+GGG	0.507071	5.4:+55016489	MS.gene88774:CDS
TAACACGTGGAAGGAGATTG+AGG	0.509793	5.4:+55016225	MS.gene88774:CDS
TGGAACTGACGATAATGTAT+TGG	0.520044	5.4:+55016627	MS.gene88774:CDS
GTCTCAGTCTATGGAATATG+TGG	0.520208	5.4:+55016461	MS.gene88774:CDS
ATAGAATTGCCTTTGCCAGA+TGG	0.529001	5.4:+55016391	MS.gene88774:CDS
CATAGCACATTGAAAGAACC+AGG	0.552532	5.4:-55016150	None:intergenic
TGTCTGTAAACTCCGGTGGA+TGG	0.556557	5.4:-55016043	None:intergenic
ACCTGATCACCGTCACCACC+GGG	0.560215	5.4:-55016751	None:intergenic
ACGAAAAGTGGTGATATCGT+TGG	0.576164	5.4:+55016607	MS.gene88774:CDS
TACCCATAAATCATACACTC+TGG	0.579461	5.4:-55016428	None:intergenic
TGCTATGATCCGAGTGTGGA+TGG	0.584774	5.4:+55016166	MS.gene88774:CDS
ATGGTTTGTTATCTCACTTG+GGG	0.589643	5.4:+55016185	MS.gene88774:CDS
GATATTAGAGGTGAATGTAG+AGG	0.593796	5.4:+55015977	MS.gene88774:CDS
AACACGTGGAAGGAGATTGA+GGG	0.597535	5.4:+55016226	MS.gene88774:CDS
TTATTTATACCATCTGGCAA+AGG	0.605038	5.4:-55016400	None:intergenic
TGAGTCTACTGATGATTACC+TGG	0.607214	5.4:+55016132	MS.gene88774:CDS
TCCATATTCATGGTCCGAGT+AGG	0.609932	5.4:-55016689	None:intergenic
ATTGAGAGCTAACACGTGGA+AGG	0.612766	5.4:+55016216	MS.gene88774:CDS
TATCTATGGAATCCATCCAC+CGG	0.612787	5.4:+55016031	MS.gene88774:CDS
GCTAGAGCATCACTCCTACT+CGG	0.623312	5.4:+55016675	MS.gene88774:CDS
GGGTATTTGTCTGTAAACTC+CGG	0.623506	5.4:-55016050	None:intergenic
GATAACAAACCATCCACACT+CGG	0.625177	5.4:-55016175	None:intergenic
TATTTGTCTGTAAACTCCGG+TGG	0.629594	5.4:-55016047	None:intergenic
ATTCTGTATACATAACCACT+AGG	0.630116	5.4:-55016714	None:intergenic
TTCTGTATACATAACCACTA+GGG	0.647948	5.4:-55016713	None:intergenic
AGTAGAGTCGCTATTAAATG+GGG	0.668633	5.4:+55016291	MS.gene88774:CDS
CCATGAATATGGATCCCTAG+TGG	0.690446	5.4:+55016699	MS.gene88774:CDS
TCTCTGCTTTCACTTCCCGG+TGG	0.698305	5.4:+55016736	MS.gene88774:CDS
TCTCATTGAGAGCTAACACG+TGG	0.701566	5.4:+55016212	MS.gene88774:CDS
ACGTGGAAGGAGATTGAGGG+TGG	0.709196	5.4:+55016229	MS.gene88774:CDS
AATGTGCTATGATCCGAGTG+TGG	0.714317	5.4:+55016162	MS.gene88774:CDS
AGATCTATAAAATATCCGTG+AGG	0.768215	5.4:-55015953	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTGTTGGATTTCATTTAA+TGG	+	chr5.4:55016357-55016376	MS.gene88774:CDS	20.0%
!!	TTTATAGATCTTGATATTAG+AGG	+	chr5.4:55015965-55015984	MS.gene88774:CDS	20.0%
!!!	CAAATTATTTCTATGGTTTT+GGG	+	chr5.4:55016104-55016123	MS.gene88774:CDS	20.0%
!!!	GAAATAATTTGCTTCTAAAT+CGG	-	chr5.4:55016095-55016114	None:intergenic	20.0%
!!!	TTAGAAGCAAATTATTTCTA+TGG	+	chr5.4:55016097-55016116	MS.gene88774:CDS	20.0%
!	AGATCAATGAATGTTATTGT+TGG	+	chr5.4:55016343-55016362	MS.gene88774:CDS	25.0%
!	TATGATTTATGGGTATTTAG+AGG	+	chr5.4:55016436-55016455	MS.gene88774:CDS	25.0%
!	TTGGATTTCATTTAATGGAA+AGG	+	chr5.4:55016362-55016381	MS.gene88774:CDS	25.0%
!!	ATAAAGGTACAATTGACATA+TGG	+	chr5.4:55016488-55016507	MS.gene88774:CDS	25.0%
!!	TAAAGGTACAATTGACATAT+GGG	+	chr5.4:55016489-55016508	MS.gene88774:CDS	25.0%
!!!	GCAAATTATTTCTATGGTTT+TGG	+	chr5.4:55016103-55016122	MS.gene88774:CDS	25.0%
	AGATCTATAAAATATCCGTG+AGG	-	chr5.4:55015956-55015975	None:intergenic	30.0%
	ATTCTGTATACATAACCACT+AGG	-	chr5.4:55016717-55016736	None:intergenic	30.0%
	CTGTCCTTTATCATTATACT+TGG	-	chr5.4:55016653-55016672	None:intergenic	30.0%
	GAACCATTATTTATACCATC+TGG	-	chr5.4:55016409-55016428	None:intergenic	30.0%
	GAATCATGAACAGTAGTAAA+GGG	-	chr5.4:55016073-55016092	None:intergenic	30.0%
	GTTATTCAAGCCTTTATCTA+TGG	+	chr5.4:55016017-55016036	MS.gene88774:CDS	30.0%
	TAGATAAAGGCTTGAATAAC+CGG	-	chr5.4:55016017-55016036	None:intergenic	30.0%
	TATTAAATGGGGTTATTCAC+TGG	+	chr5.4:55016302-55016321	MS.gene88774:CDS	30.0%
	TTATTTATACCATCTGGCAA+AGG	-	chr5.4:55016403-55016422	None:intergenic	30.0%
	TTCCAGAGTGTATGATTTAT+GGG	+	chr5.4:55016426-55016445	MS.gene88774:CDS	30.0%
	TTCTGTATACATAACCACTA+GGG	-	chr5.4:55016716-55016735	None:intergenic	30.0%
	TTGCCAGATGGTATAAATAA+TGG	+	chr5.4:55016403-55016422	MS.gene88774:CDS	30.0%
	TTGGCCAAGTATAATGATAA+AGG	+	chr5.4:55016646-55016665	MS.gene88774:CDS	30.0%
!	AAGACTCTTGTTCTTTCTTT+TGG	+	chr5.4:55016547-55016566	MS.gene88774:CDS	30.0%
!	CACTTTTCGTACAATATTTC+GGG	-	chr5.4:55016597-55016616	None:intergenic	30.0%
!!	CCACTTTTCGTACAATATTT+CGG	-	chr5.4:55016598-55016617	None:intergenic	30.0%
	AATACAATGTGCAATCGTCT+TGG	+	chr5.4:55016521-55016540	MS.gene88774:CDS	35.0%
	AGAGTAGAGTCGCTATTAAA+TGG	+	chr5.4:55016289-55016308	MS.gene88774:CDS	35.0%
	AGTAGAGTCGCTATTAAATG+GGG	+	chr5.4:55016291-55016310	MS.gene88774:CDS	35.0%
	CCGAAATATTGTACGAAAAG+TGG	+	chr5.4:55016595-55016614	MS.gene88774:CDS	35.0%
	GAGTAGAGTCGCTATTAAAT+GGG	+	chr5.4:55016290-55016309	MS.gene88774:CDS	35.0%
	GATATTAGAGGTGAATGTAG+AGG	+	chr5.4:55015977-55015996	MS.gene88774:CDS	35.0%
	GGAATCATGAACAGTAGTAA+AGG	-	chr5.4:55016074-55016093	None:intergenic	35.0%
	GTTCCAGAGTGTATGATTTA+TGG	+	chr5.4:55016425-55016444	MS.gene88774:CDS	35.0%
	TACCCATAAATCATACACTC+TGG	-	chr5.4:55016431-55016450	None:intergenic	35.0%
	TGGAACTGACGATAATGTAT+TGG	+	chr5.4:55016627-55016646	MS.gene88774:CDS	35.0%
!	ATGGATTTTTCATCTCCTCA+CGG	+	chr5.4:55015938-55015957	MS.gene88774:CDS	35.0%
!	TGGATGGATTCCATAGATAA+AGG	-	chr5.4:55016030-55016049	None:intergenic	35.0%
!!	AGAGGCTTTATACTTTTCTC+CGG	+	chr5.4:55015995-55016014	MS.gene88774:CDS	35.0%
!!	ATGGTTTGTTATCTCACTTG+GGG	+	chr5.4:55016185-55016204	MS.gene88774:CDS	35.0%
!!	GATGGTTTGTTATCTCACTT+GGG	+	chr5.4:55016184-55016203	MS.gene88774:CDS	35.0%
	AAATGGGGTTATTCACTGGT+TGG	+	chr5.4:55016306-55016325	MS.gene88774:CDS	40.0%
	ACGAAAAGTGGTGATATCGT+TGG	+	chr5.4:55016607-55016626	MS.gene88774:CDS	40.0%
	ATAGAATTGCCTTTGCCAGA+TGG	+	chr5.4:55016391-55016410	MS.gene88774:CDS	40.0%
	CATAGCACATTGAAAGAACC+AGG	-	chr5.4:55016153-55016172	None:intergenic	40.0%
	GATAACAAACCATCCACACT+CGG	-	chr5.4:55016178-55016197	None:intergenic	40.0%
	GGGTATTTGTCTGTAAACTC+CGG	-	chr5.4:55016053-55016072	None:intergenic	40.0%
	GTCTCAGTCTATGGAATATG+TGG	+	chr5.4:55016461-55016480	MS.gene88774:CDS	40.0%
	TATCTATGGAATCCATCCAC+CGG	+	chr5.4:55016031-55016050	MS.gene88774:CDS	40.0%
	TATTTGTCTGTAAACTCCGG+TGG	-	chr5.4:55016050-55016069	None:intergenic	40.0%
	TGAGTCTACTGATGATTACC+TGG	+	chr5.4:55016132-55016151	MS.gene88774:CDS	40.0%
	TGGAATATGTGGCGTGATAA+AGG	+	chr5.4:55016472-55016491	MS.gene88774:CDS	40.0%
	TTAGAGGATGTCTCAGTCTA+TGG	+	chr5.4:55016452-55016471	MS.gene88774:CDS	40.0%
	TTCGGGCAAAAGTAGTGAAT+GGG	-	chr5.4:55016580-55016599	None:intergenic	40.0%
	TTTCGGGCAAAAGTAGTGAA+TGG	-	chr5.4:55016581-55016600	None:intergenic	40.0%
!!	GGATGGTTTGTTATCTCACT+TGG	+	chr5.4:55016183-55016202	MS.gene88774:CDS	40.0%
	AACACGTGGAAGGAGATTGA+GGG	+	chr5.4:55016226-55016245	MS.gene88774:CDS	45.0%
	AATGTGCTATGATCCGAGTG+TGG	+	chr5.4:55016162-55016181	MS.gene88774:CDS	45.0%
	ATTGAGAGCTAACACGTGGA+AGG	+	chr5.4:55016216-55016235	MS.gene88774:CDS	45.0%
	CCACTAGGGATCCATATTCA+TGG	-	chr5.4:55016702-55016721	None:intergenic	45.0%
	CCATGAATATGGATCCCTAG+TGG	+	chr5.4:55016699-55016718	MS.gene88774:CDS	45.0%
	GAATCTCTGCTTTCACTTCC+CGG	+	chr5.4:55016733-55016752	MS.gene88774:CDS	45.0%
	TAACACGTGGAAGGAGATTG+AGG	+	chr5.4:55016225-55016244	MS.gene88774:CDS	45.0%
	TCCATATTCATGGTCCGAGT+AGG	-	chr5.4:55016692-55016711	None:intergenic	45.0%
	TCCTACTCGGACCATGAATA+TGG	+	chr5.4:55016688-55016707	MS.gene88774:CDS	45.0%
	TCTCATTGAGAGCTAACACG+TGG	+	chr5.4:55016212-55016231	MS.gene88774:CDS	45.0%
	TGCTATGATCCGAGTGTGGA+TGG	+	chr5.4:55016166-55016185	MS.gene88774:CDS	50.0%
	TGTCTGTAAACTCCGGTGGA+TGG	-	chr5.4:55016046-55016065	None:intergenic	50.0%
!	GCTAGAGCATCACTCCTACT+CGG	+	chr5.4:55016675-55016694	MS.gene88774:CDS	50.0%
	AACCTGATCACCGTCACCAC+CGG	-	chr5.4:55016755-55016774	None:intergenic	55.0%
	ACGTGGAAGGAGATTGAGGG+TGG	+	chr5.4:55016229-55016248	MS.gene88774:CDS	55.0%
	CTTTCACTTCCCGGTGGTGA+CGG	+	chr5.4:55016742-55016761	MS.gene88774:CDS	55.0%
	TCTCTGCTTTCACTTCCCGG+TGG	+	chr5.4:55016736-55016755	MS.gene88774:CDS	55.0%
	ACCTGATCACCGTCACCACC+GGG	-	chr5.4:55016754-55016773	None:intergenic	60.0%
!!	TCCCGGTGGTGACGGTGATC+AGG	+	chr5.4:55016750-55016769	MS.gene88774:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	55015938	55016777	55015938	ID=MS.gene88774
chr5.4	mRNA	55015938	55016777	55015938	ID=MS.gene88774.t1;Parent=MS.gene88774
chr5.4	exon	55015938	55016777	55015938	ID=MS.gene88774.t1.exon1;Parent=MS.gene88774.t1
chr5.4	CDS	55015938	55016777	55015938	ID=cds.MS.gene88774.t1;Parent=MS.gene88774.t1

Gene Sequence

>MS.gene88774

ATGGATTTTTCATCTCCTCACGGATATTTTATAGATCTTGATATTAGAGGTGAATGTAGAGGCTTTATACTTTTCTCCGGTTATTCAAGCCTTTATCTATGGAATCCATCCACCGGAGTTTACAGACAAATACCCTTTACTACTGTTCATGATTCCGATTTAGAAGCAAATTATTTCTATGGTTTTGGGTATGATGAGTCTACTGATGATTACCTGGTTCTTTCAATGTGCTATGATCCGAGTGTGGATGGTTTGTTATCTCACTTGGGGCTTTTCTCATTGAGAGCTAACACGTGGAAGGAGATTGAGGGTGGTGACAATTTGCGTTATTCGCAGTCGTCTATTTATTCTAGAGTAGAGTCGCTATTAAATGGGGTTATTCACTGGTTGGCTTTTCGTGATGATAGATCAATGAATGTTATTGTTGGATTTCATTTAATGGAAAGGAAACTTATAGAATTGCCTTTGCCAGATGGTATAAATAATGGTTCCAGAGTGTATGATTTATGGGTATTTAGAGGATGTCTCAGTCTATGGAATATGTGGCGTGATAAAGGTACAATTGACATATGGGTGATGAAAAAATACAATGTGCAATCGTCTTGGACTAAGACTCTTGTTCTTTCTTTTGGTGACATTCCCATTCACTACTTTTGCCCGAAATATTGTACGAAAAGTGGTGATATCGTTGGAACTGACGATAATGTATTGGCCAAGTATAATGATAAAGGACAGCTGCTAGAGCATCACTCCTACTCGGACCATGAATATGGATCCCTAGTGGTTATGTATACAGAATCTCTGCTTTCACTTCCCGGTGGTGACGGTGATCAGGTTTAA

Protein sequence

>MS.gene88774.t1

MDFSSPHGYFIDLDIRGECRGFILFSGYSSLYLWNPSTGVYRQIPFTTVHDSDLEANYFYGFGYDESTDDYLVLSMCYDPSVDGLLSHLGLFSLRANTWKEIEGGDNLRYSQSSIYSRVESLLNGVIHWLAFRDDRSMNVIVGFHLMERKLIELPLPDGINNGSRVYDLWVFRGCLSLWNMWRDKGTIDIWVMKKYNVQSSWTKTLVLSFGDIPIHYFCPKYCTKSGDIVGTDDNVLAKYNDKGQLLEHHSYSDHEYGSLVVMYTESLLSLPGGDGDQV