AlfalfaGEDB | MS.gene68890

M. sativa cultivar XinJiangDaYe / MS.gene68890

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68890.t1	RHN59188.1	66.7	225	53	5	2	207	193	414	8.50E-75	290

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68890.t1	G7JVS8	66.7	225	53	5	2	207	165	386	6.1e-75	290.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene87588	MS.gene68890	PPI
MS.gene055694	MS.gene68890	PPI
MS.gene71159	MS.gene68890	PPI
MS.gene96448	MS.gene68890	PPI
MS.gene77858	MS.gene68890	PPI
MS.gene041392	MS.gene68890	PPI
MS.gene68890	MS.gene041473	PPI
MS.gene58317	MS.gene68890	PPI
MS.gene68890	MS.gene50311	PPI
MS.gene069075	MS.gene68890	PPI
MS.gene68890	MS.gene85454	PPI
MS.gene033081	MS.gene68890	PPI
MS.gene68890	MS.gene57538	PPI
MS.gene031591	MS.gene68890	PPI
MS.gene68890	MS.gene058693	PPI
MS.gene68890	MS.gene27319	PPI
MS.gene035262	MS.gene68890	PPI
MS.gene68890	MS.gene041395	PPI
MS.gene51199	MS.gene68890	PPI
MS.gene58321	MS.gene68890	PPI
MS.gene064108	MS.gene68890	PPI
MS.gene062698	MS.gene68890	PPI
MS.gene57536	MS.gene68890	PPI
MS.gene96126	MS.gene68890	PPI
MS.gene019503	MS.gene68890	PPI
MS.gene016524	MS.gene68890	PPI
MS.gene87559	MS.gene68890	PPI
MS.gene50304	MS.gene68890	PPI
MS.gene68890	MS.gene064083	PPI
MS.gene041473	MS.gene68890	PPI
MS.gene68890	MS.gene58783	PPI
MS.gene59943	MS.gene68890	PPI
MS.gene68890	MS.gene40988	PPI
MS.gene31587	MS.gene68890	PPI
MS.gene041393	MS.gene68890	PPI
MS.gene033441	MS.gene68890	PPI
MS.gene68890	MS.gene24173	PPI
MS.gene68890	MS.gene036584	PPI
MS.gene063826	MS.gene68890	PPI
MS.gene68890	MS.gene42451	PPI
MS.gene060367	MS.gene68890	PPI
MS.gene44892	MS.gene68890	PPI
MS.gene68890	MS.gene023999	PPI
MS.gene036664	MS.gene68890	PPI
MS.gene58239	MS.gene68890	PPI
MS.gene066641	MS.gene68890	PPI
MS.gene68890	MS.gene69307	PPI
MS.gene000038	MS.gene68890	PPI
MS.gene57531	MS.gene68890	PPI
MS.gene064111	MS.gene68890	PPI
MS.gene67501	MS.gene68890	PPI
MS.gene68890	MS.gene036581	PPI
MS.gene39262	MS.gene68890	PPI
MS.gene58241	MS.gene68890	PPI
MS.gene053256	MS.gene68890	PPI
MS.gene025887	MS.gene68890	PPI
MS.gene019507	MS.gene68890	PPI
MS.gene045474	MS.gene68890	PPI
MS.gene75875	MS.gene68890	PPI
MS.gene041470	MS.gene68890	PPI
MS.gene68890	MS.gene50320	PPI
MS.gene058694	MS.gene68890	PPI
MS.gene064090	MS.gene68890	PPI
MS.gene68890	MS.gene58314	PPI
MS.gene68890	MS.gene87557	PPI
MS.gene058701	MS.gene68890	PPI
MS.gene68890	MS.gene035263	PPI
MS.gene68890	MS.gene67501	PPI
MS.gene68890	MS.gene96406	PPI
MS.gene015089	MS.gene68890	PPI
MS.gene006710	MS.gene68890	PPI
MS.gene90743	MS.gene68890	PPI
MS.gene011679	MS.gene68890	PPI
MS.gene68890	MS.gene40878	PPI
MS.gene033079	MS.gene68890	PPI
MS.gene64001	MS.gene68890	PPI
MS.gene60027	MS.gene68890	PPI
MS.gene57533	MS.gene68890	PPI
MS.gene36704	MS.gene68890	PPI
MS.gene032970	MS.gene68890	PPI
MS.gene68890	MS.gene047279	PPI
MS.gene68890	MS.gene50305	PPI
MS.gene77856	MS.gene68890	PPI
MS.gene62398	MS.gene68890	PPI
MS.gene68890	MS.gene032969	PPI
MS.gene24826	MS.gene68890	PPI
MS.gene036556	MS.gene68890	PPI
MS.gene40887	MS.gene68890	PPI
MS.gene68890	MS.gene42445	PPI
MS.gene68890	MS.gene86273	PPI
MS.gene034688	MS.gene68890	PPI
MS.gene51188	MS.gene68890	PPI
MS.gene63655	MS.gene68890	PPI
MS.gene68890	MS.gene26830	PPI
MS.gene44883	MS.gene68890	PPI
MS.gene68890	MS.gene22715	PPI
MS.gene48221	MS.gene68890	PPI
MS.gene68890	MS.gene51207	PPI
MS.gene68890	MS.gene63657	PPI
MS.gene41046	MS.gene68890	PPI
MS.gene063472	MS.gene68890	PPI
MS.gene68890	MS.gene36595	PPI
MS.gene017412	MS.gene68890	PPI
MS.gene57529	MS.gene68890	PPI
MS.gene80884	MS.gene68890	PPI
MS.gene68890	MS.gene061240	PPI
MS.gene51192	MS.gene68890	PPI
MS.gene009883	MS.gene68890	PPI
MS.gene041395	MS.gene68890	PPI
MS.gene40886	MS.gene68890	PPI
MS.gene40902	MS.gene68890	PPI
MS.gene044563	MS.gene68890	PPI
MS.gene68890	MS.gene064086	PPI
MS.gene033427	MS.gene68890	PPI
MS.gene68890	MS.gene035234	PPI
MS.gene68890	MS.gene058989	PPI
MS.gene27051	MS.gene68890	PPI
MS.gene40985	MS.gene68890	PPI
MS.gene68890	MS.gene041468	PPI
MS.gene060368	MS.gene68890	PPI
MS.gene041474	MS.gene68890	PPI
MS.gene77704	MS.gene68890	PPI
MS.gene27020	MS.gene68890	PPI
MS.gene066620	MS.gene68890	PPI
MS.gene035236	MS.gene68890	PPI
MS.gene68890	MS.gene42447	PPI
MS.gene68890	MS.gene024979	PPI
MS.gene68890	MS.gene51189	PPI
MS.gene86273	MS.gene68890	PPI
MS.gene041388	MS.gene68890	PPI
MS.gene059157	MS.gene68890	PPI
MS.gene51208	MS.gene68890	PPI
MS.gene68890	MS.gene24826	PPI
MS.gene68890	MS.gene044425	PPI
MS.gene045475	MS.gene68890	PPI
MS.gene88776	MS.gene68890	PPI
MS.gene35068	MS.gene68890	PPI
MS.gene90744	MS.gene68890	PPI
MS.gene51204	MS.gene68890	PPI
MS.gene58783	MS.gene68890	PPI
MS.gene058693	MS.gene68890	PPI
MS.gene036557	MS.gene68890	PPI
MS.gene50329	MS.gene68890	PPI
MS.gene68890	MS.gene59637	PPI
MS.gene070462	MS.gene68890	PPI
MS.gene31637	MS.gene68890	PPI
MS.gene68890	MS.gene27022	PPI
MS.gene57537	MS.gene68890	PPI
MS.gene059156	MS.gene68890	PPI
MS.gene84698	MS.gene68890	PPI
MS.gene68890	MS.gene87585	PPI
MS.gene68890	MS.gene024009	PPI
MS.gene68890	MS.gene036599	PPI
MS.gene009891	MS.gene68890	PPI
MS.gene82082	MS.gene68890	PPI
MS.gene50306	MS.gene68890	PPI
MS.gene68890	MS.gene006705	PPI
MS.gene90742	MS.gene68890	PPI
MS.gene68890	MS.gene035237	PPI
MS.gene57535	MS.gene68890	PPI
MS.gene68890	MS.gene000036	PPI
MS.gene87200	MS.gene68890	PPI
MS.gene033432	MS.gene68890	PPI
MS.gene68890	MS.gene036664	PPI
MS.gene68890	MS.gene053257	PPI
MS.gene68890	MS.gene51201	PPI
MS.gene68890	MS.gene058696	PPI
MS.gene68890	MS.gene009893	PPI
MS.gene59639	MS.gene68890	PPI
MS.gene44885	MS.gene68890	PPI
MS.gene68890	MS.gene50336	PPI
MS.gene060370	MS.gene68890	PPI
MS.gene50327	MS.gene68890	PPI
MS.gene066635	MS.gene68890	PPI
MS.gene68890	MS.gene77704	PPI
MS.gene010758	MS.gene68890	PPI
MS.gene87586	MS.gene68890	PPI
MS.gene57530	MS.gene68890	PPI
MS.gene50326	MS.gene68890	PPI
MS.gene42451	MS.gene68890	PPI
MS.gene51200	MS.gene68890	PPI
MS.gene50339	MS.gene68890	PPI
MS.gene046958	MS.gene68890	PPI
MS.gene68890	MS.gene036663	PPI
MS.gene060366	MS.gene68890	PPI
MS.gene87564	MS.gene68890	PPI
MS.gene88774	MS.gene68890	PPI
MS.gene68890	MS.gene57525	PPI
MS.gene68890	MS.gene023996	PPI
MS.gene68890	MS.gene030114	PPI
MS.gene42452	MS.gene68890	PPI
MS.gene68890	MS.gene045473	PPI
MS.gene063414	MS.gene68890	PPI
MS.gene68890	MS.gene50301	PPI
MS.gene68890	MS.gene045474	PPI
MS.gene68890	MS.gene031590	PPI
MS.gene009892	MS.gene68890	PPI
MS.gene68890	MS.gene40984	PPI
MS.gene68890	MS.gene064108	PPI
MS.gene57526	MS.gene68890	PPI
MS.gene021553	MS.gene68890	PPI
MS.gene26957	MS.gene68890	PPI
MS.gene033875	MS.gene68890	PPI
MS.gene97996	MS.gene68890	PPI
MS.gene036582	MS.gene68890	PPI
MS.gene27021	MS.gene68890	PPI
MS.gene035235	MS.gene68890	PPI
MS.gene68890	MS.gene90742	PPI
MS.gene58320	MS.gene68890	PPI
MS.gene26101	MS.gene68890	PPI
MS.gene066120	MS.gene68890	PPI
MS.gene68890	MS.gene50332	PPI
MS.gene041394	MS.gene68890	PPI
MS.gene58781	MS.gene68890	PPI
MS.gene57717	MS.gene68890	PPI
MS.gene68890	MS.gene58240	PPI
MS.gene028390	MS.gene68890	PPI
MS.gene011106	MS.gene68890	PPI
MS.gene033440	MS.gene68890	PPI
MS.gene68890	MS.gene063472	PPI
MS.gene44886	MS.gene68890	PPI
MS.gene066623	MS.gene68890	PPI
MS.gene68890	MS.gene43790	PPI
MS.gene68890	MS.gene034680	PPI
MS.gene038756	MS.gene68890	PPI
MS.gene40904	MS.gene68890	PPI
MS.gene041390	MS.gene68890	PPI
MS.gene24286	MS.gene68890	PPI
MS.gene92376	MS.gene68890	PPI
MS.gene000035	MS.gene68890	PPI
MS.gene87569	MS.gene68890	PPI
MS.gene87573	MS.gene68890	PPI
MS.gene68890	MS.gene063474	PPI
MS.gene041491	MS.gene68890	PPI
MS.gene68890	MS.gene88416	PPI
MS.gene68890	MS.gene034681	PPI
MS.gene019504	MS.gene68890	PPI
MS.gene034762	MS.gene68890	PPI
MS.gene51207	MS.gene68890	PPI
MS.gene68890	MS.gene57532	PPI
MS.gene059096	MS.gene68890	PPI
MS.gene68890	MS.gene003076	PPI
MS.gene57528	MS.gene68890	PPI
MS.gene50297	MS.gene68890	PPI
MS.gene006711	MS.gene68890	PPI
MS.gene68890	MS.gene009892	PPI
MS.gene27285	MS.gene68890	PPI
MS.gene58716	MS.gene68890	PPI
MS.gene68580	MS.gene68890	PPI
MS.gene033444	MS.gene68890	PPI
MS.gene019505	MS.gene68890	PPI
MS.gene68890	MS.gene061241	PPI
MS.gene58785	MS.gene68890	PPI
MS.gene034690	MS.gene68890	PPI
MS.gene066639	MS.gene68890	PPI
MS.gene26949	MS.gene68890	PPI
MS.gene51189	MS.gene68890	PPI
MS.gene96407	MS.gene68890	PPI
MS.gene50309	MS.gene68890	PPI
MS.gene68890	MS.gene041489	PPI
MS.gene036760	MS.gene68890	PPI
MS.gene68890	MS.gene38220	PPI
MS.gene68890	MS.gene40986	PPI
MS.gene77857	MS.gene68890	PPI
MS.gene68890	MS.gene041394	PPI
MS.gene58311	MS.gene68890	PPI
MS.gene57527	MS.gene68890	PPI
MS.gene51191	MS.gene68890	PPI
MS.gene68890	MS.gene03060	PPI
MS.gene68890	MS.gene024011	PPI
MS.gene68890	MS.gene58241	PPI
MS.gene68890	MS.gene034677	PPI
MS.gene68890	MS.gene064109	PPI
MS.gene033426	MS.gene68890	PPI
MS.gene064086	MS.gene68890	PPI
MS.gene68890	MS.gene035238	PPI
MS.gene50298	MS.gene68890	PPI
MS.gene031590	MS.gene68890	PPI
MS.gene036584	MS.gene68890	PPI
MS.gene67687	MS.gene68890	PPI
MS.gene68890	MS.gene064114	PPI
MS.gene035261	MS.gene68890	PPI
MS.gene68890	MS.gene87584	PPI
MS.gene063670	MS.gene68890	PPI
MS.gene68890	MS.gene80610	PPI
MS.gene066626	MS.gene68890	PPI
MS.gene019506	MS.gene68890	PPI
MS.gene058692	MS.gene68890	PPI
MS.gene033083	MS.gene68890	PPI
MS.gene63658	MS.gene68890	PPI
MS.gene024002	MS.gene68890	PPI
MS.gene68890	MS.gene041391	PPI
MS.gene034686	MS.gene68890	PPI
MS.gene40982	MS.gene68890	PPI
MS.gene070461	MS.gene68890	PPI
MS.gene58315	MS.gene68890	PPI
MS.gene68890	MS.gene036558	PPI
MS.gene68890	MS.gene87554	PPI
MS.gene036662	MS.gene68890	PPI
MS.gene87563	MS.gene68890	PPI
MS.gene68890	MS.gene048193	PPI
MS.gene033431	MS.gene68890	PPI
MS.gene24212	MS.gene68890	PPI
MS.gene68890	MS.gene024420	PPI
MS.gene68890	MS.gene016220	PPI
MS.gene68890	MS.gene024008	PPI
MS.gene051820	MS.gene68890	PPI
MS.gene041475	MS.gene68890	PPI
MS.gene68890	MS.gene54541	PPI
MS.gene40988	MS.gene68890	PPI
MS.gene81242	MS.gene68890	PPI
MS.gene27283	MS.gene68890	PPI
MS.gene64203	MS.gene68890	PPI
MS.gene68890	MS.gene053299	PPI
MS.gene045140	MS.gene68890	PPI
MS.gene68890	MS.gene28758	PPI
MS.gene024004	MS.gene68890	PPI
MS.gene42444	MS.gene68890	PPI
MS.gene69309	MS.gene68890	PPI
MS.gene51202	MS.gene68890	PPI
MS.gene68890	MS.gene27284	PPI
MS.gene059101	MS.gene68890	PPI
MS.gene87562	MS.gene68890	PPI
MS.gene68890	MS.gene48221	PPI
MS.gene26829	MS.gene68890	PPI
MS.gene064104	MS.gene68890	PPI
MS.gene40878	MS.gene68890	PPI
MS.gene68890	MS.gene51190	PPI
MS.gene68890	MS.gene58319	PPI
MS.gene68890	MS.gene044426	PPI
MS.gene033443	MS.gene68890	PPI
MS.gene54049	MS.gene68890	PPI
MS.gene50337	MS.gene68890	PPI
MS.gene43789	MS.gene68890	PPI
MS.gene68890	MS.gene033442	PPI
MS.gene50332	MS.gene68890	PPI
MS.gene072177	MS.gene68890	PPI
MS.gene58722	MS.gene68890	PPI
MS.gene064091	MS.gene68890	PPI
MS.gene064112	MS.gene68890	PPI
MS.gene045476	MS.gene68890	PPI
MS.gene68890	MS.gene44428	PPI
MS.gene24208	MS.gene68890	PPI
MS.gene68890	MS.gene058669	PPI
MS.gene68890	MS.gene066120	PPI
MS.gene061241	MS.gene68890	PPI
MS.gene50307	MS.gene68890	PPI
MS.gene24213	MS.gene68890	PPI
MS.gene43796	MS.gene68890	PPI
MS.gene044429	MS.gene68890	PPI
MS.gene85454	MS.gene68890	PPI
MS.gene58312	MS.gene68890	PPI
MS.gene68890	MS.gene058703	PPI
MS.gene68890	MS.gene024000	PPI
MS.gene68890	MS.gene012215	PPI
MS.gene58313	MS.gene68890	PPI
MS.gene066622	MS.gene68890	PPI
MS.gene44887	MS.gene68890	PPI
MS.gene85043	MS.gene68890	PPI
MS.gene39265	MS.gene68890	PPI
MS.gene033430	MS.gene68890	PPI
MS.gene68890	MS.gene58316	PPI
MS.gene036583	MS.gene68890	PPI
MS.gene88780	MS.gene68890	PPI
MS.gene68890	MS.gene87564	PPI
MS.gene68890	MS.gene58315	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68890.t1	MTR_4g023090	66.667	225	53	5	2	207	165	386	1.67e-95	283
MS.gene68890.t1	MTR_4g023380	64.530	234	38	5	1	207	164	379	3.02e-93	277
MS.gene68890.t1	MTR_4g023130	67.773	211	54	4	1	206	111	312	8.42e-89	264
MS.gene68890.t1	MTR_4g023080	68.246	211	53	4	1	206	152	353	3.71e-88	263
MS.gene68890.t1	MTR_4g021785	64.789	213	60	5	1	207	152	355	1.47e-81	247
MS.gene68890.t1	MTR_4g023070	58.667	225	73	5	1	206	146	369	6.78e-80	243
MS.gene68890.t1	MTR_4g023120	57.778	225	77	4	1	207	146	370	4.19e-78	238
MS.gene68890.t1	MTR_4g023440	60.664	211	38	5	1	207	163	332	6.15e-74	226
MS.gene68890.t1	MTR_4g116330	58.605	215	76	6	2	207	170	380	1.67e-73	227
MS.gene68890.t1	MTR_3g103020	57.674	215	79	6	3	207	166	378	3.20e-72	224
MS.gene68890.t1	MTR_8g040935	55.340	206	79	4	14	207	4	208	4.50e-69	210
MS.gene68890.t1	MTR_6g060650	54.460	213	86	6	1	206	164	372	8.26e-69	214
MS.gene68890.t1	MTR_3g034180	56.250	224	77	8	1	207	270	489	4.13e-68	216
MS.gene68890.t1	MTR_4g109270	55.607	214	78	5	3	207	159	364	4.52e-68	213
MS.gene68890.t1	MTR_4g117720	56.109	221	79	8	1	207	162	378	4.63e-67	210
MS.gene68890.t1	MTR_4g023150	56.604	212	78	6	1	205	154	358	5.25e-67	209
MS.gene68890.t1	MTR_4g023200	56.604	212	78	6	1	205	154	358	6.52e-67	209
MS.gene68890.t1	MTR_4g116320	57.209	215	73	8	3	204	47	255	1.07e-66	206
MS.gene68890.t1	MTR_4g094365	54.128	218	81	7	1	207	155	364	3.85e-66	207
MS.gene68890.t1	MTR_4g023190	56.132	212	78	7	1	205	154	357	4.69e-65	204
MS.gene68890.t1	MTR_3g034160	55.204	221	80	7	2	206	157	374	1.71e-64	204
MS.gene68890.t1	MTR_4g122850	55.251	219	82	10	1	207	150	364	1.71e-63	201
MS.gene68890.t1	MTR_4g117770	54.419	215	83	5	3	207	158	367	3.72e-63	200
MS.gene68890.t1	MTR_4g117810	54.419	215	83	5	3	207	158	367	3.72e-63	200
MS.gene68890.t1	MTR_4g109280	54.167	216	85	7	2	207	148	359	1.95e-62	198
MS.gene68890.t1	MTR_8g433030	55.981	209	81	8	2	202	132	337	3.49e-62	197
MS.gene68890.t1	MTR_8g032390	55.981	209	81	8	2	202	165	370	9.47e-62	196
MS.gene68890.t1	MTR_3g034130	54.187	203	75	6	1	188	156	355	2.07e-60	193
MS.gene68890.t1	MTR_4g117780	53.023	215	86	5	3	207	158	367	2.43e-60	193
MS.gene68890.t1	MTR_6g463430	53.807	197	78	4	19	207	11	202	1.09e-59	186
MS.gene68890.t1	MTR_4g117850	53.953	215	84	9	3	204	164	376	7.64e-59	189
MS.gene68890.t1	MTR_8g433040	52.093	215	82	6	1	207	163	364	4.75e-58	187
MS.gene68890.t1	MTR_8g032380	52.093	215	82	6	1	207	163	364	4.75e-58	187
MS.gene68890.t1	MTR_4g118380	52.308	195	78	5	1	183	166	357	1.36e-55	180
MS.gene68890.t1	MTR_5g070130	47.982	223	99	5	1	207	156	377	2.37e-54	178
MS.gene68890.t1	MTR_5g070080	51.389	216	93	6	1	207	174	386	2.17e-53	175
MS.gene68890.t1	MTR_5g097210	50.926	216	87	10	1	203	150	359	1.26e-52	173
MS.gene68890.t1	MTR_4g117870	46.009	213	72	7	1	207	92	267	6.21e-51	166
MS.gene68890.t1	MTR_4g118400	48.259	201	82	5	8	201	109	294	1.11e-50	166
MS.gene68890.t1	MTR_1g055195	47.085	223	89	7	1	207	269	478	2.86e-50	169
MS.gene68890.t1	MTR_4g117530	44.976	209	73	4	3	207	83	253	4.90e-50	163
MS.gene68890.t1	MTR_4g116330	47.442	215	61	6	2	207	170	341	4.86e-49	163
MS.gene68890.t1	MTR_5g070088	46.544	217	106	4	1	207	170	386	2.04e-48	162
MS.gene68890.t1	MTR_1g055175	47.208	197	87	7	23	206	8	200	1.08e-46	152
MS.gene68890.t1	MTR_1g055135	44.105	229	97	9	1	207	156	375	1.36e-45	155
MS.gene68890.t1	MTR_1g055250	44.860	214	87	9	1	197	56	255	4.19e-45	152
MS.gene68890.t1	MTR_4g117750	44.196	224	103	8	1	206	139	358	6.45e-43	150
MS.gene68890.t1	MTR_4g117750	53.913	115	50	1	94	205	367	481	4.19e-31	118
MS.gene68890.t1	MTR_4g118370	42.593	216	90	10	1	204	64	257	5.31e-42	142
MS.gene68890.t1	MTR_1g055165	46.073	191	85	7	22	207	141	318	7.64e-42	144
MS.gene68890.t1	MTR_7g079370	42.593	216	105	6	1	201	139	350	3.33e-40	140
MS.gene68890.t1	MTR_5g023000	65.657	99	31	1	112	207	1	99	1.40e-39	131
MS.gene68890.t1	MTR_4g118360	57.364	129	45	5	84	206	1	125	3.67e-37	126
MS.gene68890.t1	MTR_8g102520	39.631	217	114	6	4	207	110	322	1.33e-36	130
MS.gene68890.t1	MTR_7g079400	39.111	225	114	7	1	207	118	337	1.88e-36	130
MS.gene68890.t1	MTR_4g121580	43.204	206	78	7	1	197	164	339	3.23e-36	130
MS.gene68890.t1	MTR_4g122860	39.352	216	87	8	9	207	132	320	8.57e-32	118
MS.gene68890.t1	MTR_8g098830	42.012	169	84	6	20	179	31	194	7.55e-31	113
MS.gene68890.t1	MTR_4g114700	39.524	210	64	7	2	198	59	218	4.34e-29	108
MS.gene68890.t1	MTR_7g079450	44.755	143	68	5	69	207	2	137	4.94e-28	103
MS.gene68890.t1	MTR_4g023430	65.854	82	22	2	132	207	141	222	1.78e-26	101
MS.gene68890.t1	MTR_4g117430	51.304	115	45	4	1	112	49	155	8.51e-26	97.8
MS.gene68890.t1	MTR_7g117720	63.218	87	25	2	123	202	186	272	6.34e-25	98.6
MS.gene68890.t1	MTR_2g048580	35.859	198	100	9	24	207	158	342	9.72e-25	99.4
MS.gene68890.t1	MTR_7g079420	37.705	183	95	7	38	207	968	1144	4.36e-24	99.8
MS.gene68890.t1	MTR_8g013010	50.442	113	46	4	1	109	203	309	1.52e-22	93.2
MS.gene68890.t1	MTR_4g023100	80.000	55	10	1	154	207	65	119	2.96e-21	85.1
MS.gene68890.t1	MTR_8g013005	62.069	58	19	1	152	206	1	58	2.20e-17	73.2
MS.gene68890.t1	MTR_4g122840	39.706	136	44	3	75	207	164	264	5.83e-17	77.0
MS.gene68890.t1	MTR_6g034720	45.556	90	44	2	1	85	80	169	2.90e-14	68.9
MS.gene68890.t1	MTR_4g116340	51.948	77	32	3	2	74	172	247	1.20e-13	67.8
MS.gene68890.t1	MTR_1g094210	26.667	195	122	7	25	207	221	406	2.42e-13	68.2
MS.gene68890.t1	MTR_2g025420	28.571	175	108	7	10	171	186	356	2.24e-12	65.5
MS.gene68890.t1	MTR_1g094210	27.564	156	100	5	25	173	221	370	2.47e-12	65.1
MS.gene68890.t1	MTR_7g017170	31.333	150	81	8	25	162	213	352	2.79e-12	65.1
MS.gene68890.t1	MTR_7g017130	31.333	150	81	8	25	162	213	352	3.43e-12	64.7
MS.gene68890.t1	MTR_1g068835	28.144	167	111	6	3	161	150	315	6.91e-12	63.9
MS.gene68890.t1	MTR_2g426020	24.631	203	138	6	4	200	171	364	8.00e-12	63.9
MS.gene68890.t1	MTR_1g055145	46.667	75	37	2	52	126	131	202	8.62e-12	63.2
MS.gene68890.t1	MTR_8g099460	27.742	155	100	6	17	168	178	323	1.05e-11	63.5
MS.gene68890.t1	MTR_2g028160	30.822	146	90	6	23	158	194	338	1.31e-11	63.2
MS.gene68890.t1	MTR_2g021150	29.167	168	104	9	3	161	167	328	2.45e-11	62.4
MS.gene68890.t1	MTR_2g028130	29.861	144	92	5	23	158	194	336	3.06e-11	62.0
MS.gene68890.t1	MTR_2g024110	25.153	163	112	5	1	153	147	309	4.06e-11	61.6
MS.gene68890.t1	MTR_3g007360	28.241	216	122	10	3	200	203	403	6.59e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene68890.t1	AT3G06240	28.977	176	110	6	3	173	223	388	1.38e-13	68.9

Find 46 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTGTTGCCTTTGATTTAA+TGG	0.113056	4.3:+74924037	MS.gene68890:CDS
CATACTGGTTTGTGGGTATT+TGG	0.151877	4.3:+74924116	MS.gene68890:CDS
AGAAAAGGGTTGCTATTTAA+TGG	0.223877	4.3:+74923969	MS.gene68890:CDS
CTAATGATACAATTGAAATA+TGG	0.264279	4.3:+74924171	MS.gene68890:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.267319	4.3:+74924135	MS.gene68890:CDS
GAAAAGGGTTGCTATTTAAT+GGG	0.297162	4.3:+74923970	MS.gene68890:CDS
AAAGAAATTCACTTCCCTTA+TGG	0.300752	4.3:+74923930	MS.gene68890:CDS
ATGATAAAGGACAGTTATTA+AGG	0.300794	4.3:+74924345	MS.gene68890:CDS
ATAATCAGATGGACTATTAA+AGG	0.324115	4.3:-74924375	None:intergenic
TTGGCTTTGCGTGAAGATTT+AGG	0.342328	4.3:+74924005	MS.gene68890:CDS
TATTTAATGGGGTTATTCAT+TGG	0.346478	4.3:+74923982	MS.gene68890:CDS
TGTTGTAACAGCATAAAGTA+TGG	0.380139	4.3:-74923871	None:intergenic
ATCTGATTATGTCATGTATA+CGG	0.391652	4.3:+74924388	MS.gene68890:CDS
GTCATCTCTTCTGTCAGAAA+AGG	0.411814	4.3:+74923954	MS.gene68890:CDS
TTGGCGAAGTATAATGATAA+AGG	0.416108	4.3:+74924332	MS.gene68890:CDS
ATAGGGCGAAAGCAGGGTTC+AGG	0.417607	4.3:-74924260	None:intergenic
TGTTCAGAATCACTTGGAAT+AGG	0.431059	4.3:-74924080	None:intergenic
TAATGGGGTTATTCATTGGT+TGG	0.432729	4.3:+74923986	MS.gene68890:CDS
CACAGAGCATTAAGACATAC+TGG	0.435069	4.3:+74924101	MS.gene68890:CDS
AATACAATGTGCATTCATCT+TGG	0.441546	4.3:+74924204	MS.gene68890:CDS
GATATTATTGGAATAAGTCC+TGG	0.455002	4.3:+74924302	MS.gene68890:CDS
TAATGATACAATTGAAATAT+GGG	0.469242	4.3:+74924172	MS.gene68890:CDS
CTTTCTTTCCATTAAATCAA+AGG	0.478029	4.3:-74924045	None:intergenic
ACAGAAGAGATGACACCATA+AGG	0.478205	4.3:-74923945	None:intergenic
CCAGTCAAGAGATGATTACT+TGG	0.479956	4.3:+74923824	None:intergenic
ATTAAGACATACTGGTTTGT+GGG	0.486970	4.3:+74924109	MS.gene68890:CDS
TGGAGAATTTCTCAGTCTAT+GGG	0.490268	4.3:+74924136	MS.gene68890:CDS
AATAAGTCCTGGGACTAGAT+TGG	0.496773	4.3:+74924313	MS.gene68890:CDS
CATTAAGACATACTGGTTTG+TGG	0.501728	4.3:+74924108	MS.gene68890:CDS
ATTTCTCAGTCTATGGGCTA+TGG	0.507502	4.3:+74924142	MS.gene68890:CDS
GAGTCTCTGCTTTCACTCCC+TGG	0.511723	4.3:+74924410	MS.gene68890:CDS
CAGAAGAGATGACACCATAA+GGG	0.519654	4.3:-74923944	None:intergenic
CTTTGCGTGAAGATTTAGGT+TGG	0.523190	4.3:+74924009	MS.gene68890:CDS
TCATCTCTTCTGTCAGAAAA+GGG	0.526425	4.3:+74923955	MS.gene68890:CDS
TAAACTTGCTCATTGTCACC+AGG	0.534960	4.3:-74924428	None:intergenic
GTCAAGAGATGATTACTTGG+TGG	0.535085	4.3:+74923827	None:intergenic
AGAACATATAGGGCGAAAGC+AGG	0.538165	4.3:-74924267	None:intergenic
TCTCATTTAGAGATAATACA+TGG	0.548869	4.3:+74923907	MS.gene68890:CDS
TACTTCGCCAATCTAGTCCC+AGG	0.568427	4.3:-74924320	None:intergenic
ATATTATTGGAATAAGTCCT+GGG	0.574033	4.3:+74924303	MS.gene68890:CDS
AAAAGGGTTGCTATTTAATG+GGG	0.580733	4.3:+74923971	MS.gene68890:CDS
GCGAAAGCAGGGTTCAGGAA+TGG	0.589429	4.3:-74924255	None:intergenic
GTATACATGACATAATCAGA+TGG	0.633695	4.3:-74924386	None:intergenic
GAACATATAGGGCGAAAGCA+GGG	0.645510	4.3:-74924266	None:intergenic
GCTCTGTGTTCAGAATCACT+TGG	0.661251	4.3:-74924086	None:intergenic
AAACTTGCTCATTGTCACCA+GGG	0.667535	4.3:-74924427	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATGATACAATTGAAATAT+GGG	+	chr4.3:74924172-74924191	MS.gene68890:CDS	15.0%
!!	ACAAAAAATGGTGATATTAT+TGG	+	chr4.3:74924290-74924309	MS.gene68890:CDS	20.0%
!!	CTAATGATACAATTGAAATA+TGG	+	chr4.3:74924171-74924190	MS.gene68890:CDS	20.0%
!!!	CATTTTTTGTAGAACATATA+GGG	-	chr4.3:74924280-74924299	None:intergenic	20.0%
!	ATATTATTGGAATAAGTCCT+GGG	+	chr4.3:74924303-74924322	MS.gene68890:CDS	25.0%
!	ATCTGATTATGTCATGTATA+CGG	+	chr4.3:74924388-74924407	MS.gene68890:CDS	25.0%
!	ATGATAAAGGACAGTTATTA+AGG	+	chr4.3:74924345-74924364	MS.gene68890:CDS	25.0%
!	CCTATATGTTCTACAAAAAA+TGG	+	chr4.3:74924278-74924297	MS.gene68890:CDS	25.0%
!	CTTTCTTTCCATTAAATCAA+AGG	-	chr4.3:74924048-74924067	None:intergenic	25.0%
!	TATTTAATGGGGTTATTCAT+TGG	+	chr4.3:74923982-74924001	MS.gene68890:CDS	25.0%
!	TCTCATTTAGAGATAATACA+TGG	+	chr4.3:74923907-74923926	MS.gene68890:CDS	25.0%
!!!	ATAATCAGATGGACTATTAA+AGG	-	chr4.3:74924378-74924397	None:intergenic	25.0%
!!!	CCATTTTTTGTAGAACATAT+AGG	-	chr4.3:74924281-74924300	None:intergenic	25.0%
	AAAGAAATTCACTTCCCTTA+TGG	+	chr4.3:74923930-74923949	MS.gene68890:CDS	30.0%
	AATACAATGTGCATTCATCT+TGG	+	chr4.3:74924204-74924223	MS.gene68890:CDS	30.0%
	GATATTATTGGAATAAGTCC+TGG	+	chr4.3:74924302-74924321	MS.gene68890:CDS	30.0%
	GTATACATGACATAATCAGA+TGG	-	chr4.3:74924389-74924408	None:intergenic	30.0%
	TGTTGTAACAGCATAAAGTA+TGG	-	chr4.3:74923874-74923893	None:intergenic	30.0%
	TTGGCGAAGTATAATGATAA+AGG	+	chr4.3:74924332-74924351	MS.gene68890:CDS	30.0%
!	CATTGTTGCCTTTGATTTAA+TGG	+	chr4.3:74924037-74924056	MS.gene68890:CDS	30.0%
!!	AAAAGGGTTGCTATTTAATG+GGG	+	chr4.3:74923971-74923990	MS.gene68890:CDS	30.0%
!!	AGAAAAGGGTTGCTATTTAA+TGG	+	chr4.3:74923969-74923988	MS.gene68890:CDS	30.0%
!!	ATTAAGACATACTGGTTTGT+GGG	+	chr4.3:74924109-74924128	MS.gene68890:CDS	30.0%
!!	GAAAAGGGTTGCTATTTAAT+GGG	+	chr4.3:74923970-74923989	MS.gene68890:CDS	30.0%
	TAATGGGGTTATTCATTGGT+TGG	+	chr4.3:74923986-74924005	MS.gene68890:CDS	35.0%
	TCATCTCTTCTGTCAGAAAA+GGG	+	chr4.3:74923955-74923974	MS.gene68890:CDS	35.0%
	TGGAGAATTTCTCAGTCTAT+GGG	+	chr4.3:74924136-74924155	MS.gene68890:CDS	35.0%
	TGTTCAGAATCACTTGGAAT+AGG	-	chr4.3:74924083-74924102	None:intergenic	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	+	chr4.3:74924135-74924154	MS.gene68890:CDS	35.0%
!!	CATTAAGACATACTGGTTTG+TGG	+	chr4.3:74924108-74924127	MS.gene68890:CDS	35.0%
	AATAAGTCCTGGGACTAGAT+TGG	+	chr4.3:74924313-74924332	MS.gene68890:CDS	40.0%
	ACAGAAGAGATGACACCATA+AGG	-	chr4.3:74923948-74923967	None:intergenic	40.0%
	CAGAAGAGATGACACCATAA+GGG	-	chr4.3:74923947-74923966	None:intergenic	40.0%
	CTTTGCGTGAAGATTTAGGT+TGG	+	chr4.3:74924009-74924028	MS.gene68890:CDS	40.0%
	GTCATCTCTTCTGTCAGAAA+AGG	+	chr4.3:74923954-74923973	MS.gene68890:CDS	40.0%
!	AAACTTGCTCATTGTCACCA+GGG	-	chr4.3:74924430-74924449	None:intergenic	40.0%
!	ATTTCTCAGTCTATGGGCTA+TGG	+	chr4.3:74924142-74924161	MS.gene68890:CDS	40.0%
!	CACAGAGCATTAAGACATAC+TGG	+	chr4.3:74924101-74924120	MS.gene68890:CDS	40.0%
!	TAAACTTGCTCATTGTCACC+AGG	-	chr4.3:74924431-74924450	None:intergenic	40.0%
!!	CATACTGGTTTGTGGGTATT+TGG	+	chr4.3:74924116-74924135	MS.gene68890:CDS	40.0%
!!	TTGGCTTTGCGTGAAGATTT+AGG	+	chr4.3:74924005-74924024	MS.gene68890:CDS	40.0%
	AGAACATATAGGGCGAAAGC+AGG	-	chr4.3:74924270-74924289	None:intergenic	45.0%
	GAACATATAGGGCGAAAGCA+GGG	-	chr4.3:74924269-74924288	None:intergenic	45.0%
	GCTCTGTGTTCAGAATCACT+TGG	-	chr4.3:74924089-74924108	None:intergenic	45.0%
	TACTTCGCCAATCTAGTCCC+AGG	-	chr4.3:74924323-74924342	None:intergenic	50.0%
	ATAGGGCGAAAGCAGGGTTC+AGG	-	chr4.3:74924263-74924282	None:intergenic	55.0%
	GAGTCTCTGCTTTCACTCCC+TGG	+	chr4.3:74924410-74924429	MS.gene68890:CDS	55.0%
	GCGAAAGCAGGGTTCAGGAA+TGG	-	chr4.3:74924258-74924277	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	74923828	74924451	74923828	ID=MS.gene68890
chr4.3	mRNA	74923828	74924451	74923828	ID=MS.gene68890.t1;Parent=MS.gene68890
chr4.3	exon	74923828	74924451	74923828	ID=MS.gene68890.t1.exon1;Parent=MS.gene68890.t1
chr4.3	CDS	74923828	74924451	74923828	ID=cds.MS.gene68890.t1;Parent=MS.gene68890.t1

Gene Sequence

>MS.gene68890

TCAAGAGATGATTACTTGGTGGTTTCATTGTTCTATAATGAAACCATACTTTATGCTGTTACAACACATTTGAAGTTTTTCTCATTTAGAGATAATACATGGAAAGAAATTCACTTCCCTTATGGTGTCATCTCTTCTGTCAGAAAAGGGTTGCTATTTAATGGGGTTATTCATTGGTTGGCTTTGCGTGAAGATTTAGGTTGGAATGTCATTGTTGCCTTTGATTTAATGGAAAGAAAGTTGTTTGAGATGCCTATTCCAAGTGATTCTGAACACAGAGCATTAAGACATACTGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGGCTATGGATACTGCTAATGATACAATTGAAATATGGGTGATGAAAGAATACAATGTGCATTCATCTTGGACTAAAACTCTTGTTCTTTCTGTTGATACCATTCCTGAACCCTGCTTTCGCCCTATATGTTCTACAAAAAATGGTGATATTATTGGAATAAGTCCTGGGACTAGATTGGCGAAGTATAATGATAAAGGACAGTTATTAAGGCATCGCTCCTTTAATAGTCCATCTGATTATGTCATGTATACGGAGTCTCTGCTTTCACTCCCTGGTGACAATGAGCAAGTTTAA

Protein sequence

>MS.gene68890.t1

SRDDYLVVSLFYNETILYAVTTHLKFFSFRDNTWKEIHFPYGVISSVRKGLLFNGVIHWLALREDLGWNVIVAFDLMERKLFEMPIPSDSEHRALRHTGLWVFGEFLSLWAMDTANDTIEIWVMKEYNVHSSWTKTLVLSVDTIPEPCFRPICSTKNGDIIGISPGTRLAKYNDKGQLLRHRSFNSPSDYVMYTESLLSLPGDNEQV