AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036663


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036663.t1 MTR_4g116330 82.540 378 57 3 13 386 8 380 0.0 616
MS.gene036663.t1 MTR_4g116330 74.074 378 50 4 13 386 8 341 0.0 530
MS.gene036663.t1 MTR_3g103020 53.488 387 162 8 8 386 2 378 1.13e-124 365
MS.gene036663.t1 MTR_4g117850 52.926 376 146 11 21 383 19 376 1.40e-118 349
MS.gene036663.t1 MTR_3g034180 52.405 395 152 13 11 385 110 488 1.49e-118 353
MS.gene036663.t1 MTR_4g109280 54.891 368 145 8 25 386 7 359 5.34e-116 342
MS.gene036663.t1 MTR_6g060650 53.627 386 145 10 19 385 2 372 4.14e-112 332
MS.gene036663.t1 MTR_4g117780 51.554 386 153 11 16 386 1 367 8.48e-112 331
MS.gene036663.t1 MTR_4g023080 52.151 372 153 10 16 383 1 351 1.13e-111 330
MS.gene036663.t1 MTR_4g094365 51.200 375 161 10 21 386 3 364 1.54e-111 330
MS.gene036663.t1 MTR_4g023090 50.891 393 155 11 17 385 7 385 2.86e-111 331
MS.gene036663.t1 MTR_4g109270 52.000 375 148 11 26 386 8 364 5.81e-111 329
MS.gene036663.t1 MTR_3g034160 51.538 390 153 13 16 385 1 374 2.81e-110 328
MS.gene036663.t1 MTR_4g117770 51.444 381 161 9 16 386 1 367 2.03e-109 325
MS.gene036663.t1 MTR_4g117810 51.444 381 161 9 16 386 1 367 2.03e-109 325
MS.gene036663.t1 MTR_4g023070 50.263 380 152 10 26 383 3 367 1.29e-108 323
MS.gene036663.t1 MTR_4g021785 52.186 366 153 8 25 386 8 355 4.40e-108 322
MS.gene036663.t1 MTR_4g122850 51.233 365 151 15 37 386 12 364 7.67e-105 314
MS.gene036663.t1 MTR_4g023120 48.813 379 159 10 26 383 3 367 7.31e-104 311
MS.gene036663.t1 MTR_4g023130 49.462 372 122 9 16 383 1 310 1.36e-103 308
MS.gene036663.t1 MTR_3g034130 48.138 376 165 9 19 373 2 368 2.77e-102 307
MS.gene036663.t1 MTR_4g023380 48.878 401 146 12 17 386 7 379 1.71e-100 303
MS.gene036663.t1 MTR_4g118380 51.524 361 148 8 19 357 2 357 1.48e-99 300
MS.gene036663.t1 MTR_8g433040 47.781 383 156 13 19 386 11 364 5.63e-98 296
MS.gene036663.t1 MTR_8g032380 47.781 383 156 13 19 386 11 364 5.63e-98 296
MS.gene036663.t1 MTR_1g055135 46.923 390 169 16 17 386 4 375 5.97e-97 294
MS.gene036663.t1 MTR_4g117720 49.598 373 133 10 25 386 50 378 2.77e-96 292
MS.gene036663.t1 MTR_4g023440 48.128 374 140 9 17 386 9 332 7.99e-96 289
MS.gene036663.t1 MTR_4g023200 49.296 355 148 13 40 383 24 357 4.26e-95 288
MS.gene036663.t1 MTR_4g023190 50.000 378 154 14 17 383 3 356 6.58e-95 288
MS.gene036663.t1 MTR_5g070080 46.835 395 160 13 25 386 9 386 1.05e-94 288
MS.gene036663.t1 MTR_4g023150 48.942 378 159 14 17 383 3 357 1.12e-93 285
MS.gene036663.t1 MTR_5g097210 46.174 379 173 13 18 384 2 361 7.33e-92 281
MS.gene036663.t1 MTR_5g070130 47.436 390 173 15 16 386 1 377 4.54e-91 279
MS.gene036663.t1 MTR_8g032390 45.802 393 155 14 5 381 20 370 2.50e-90 277
MS.gene036663.t1 MTR_4g116320 65.741 216 68 2 173 384 43 256 2.72e-90 273
MS.gene036663.t1 MTR_5g070088 44.819 386 181 12 23 383 4 382 5.34e-87 269
MS.gene036663.t1 MTR_1g055165 42.819 376 147 13 19 386 3 318 2.35e-83 257
MS.gene036663.t1 MTR_4g116340 56.031 257 81 6 3 249 13 247 7.65e-81 248
MS.gene036663.t1 MTR_4g117750 45.889 377 162 14 25 382 2 355 3.80e-79 251
MS.gene036663.t1 MTR_4g117750 60.909 110 41 1 274 383 373 480 5.50e-34 132
MS.gene036663.t1 MTR_4g121580 43.455 382 152 15 16 376 1 339 1.38e-76 242
MS.gene036663.t1 MTR_4g117870 45.192 312 123 8 78 386 1 267 2.67e-75 234
MS.gene036663.t1 MTR_8g040935 56.566 198 83 2 192 386 11 208 6.88e-73 226
MS.gene036663.t1 MTR_1g055195 48.736 277 118 9 120 386 216 478 1.95e-70 229
MS.gene036663.t1 MTR_8g013010 49.814 269 113 8 25 283 53 309 6.57e-69 220
MS.gene036663.t1 MTR_8g433030 55.204 221 83 8 169 381 125 337 3.13e-65 211
MS.gene036663.t1 MTR_4g118400 40.426 329 138 10 57 380 19 294 7.96e-65 209
MS.gene036663.t1 MTR_4g118370 47.410 251 97 9 142 383 33 257 8.41e-63 202
MS.gene036663.t1 MTR_6g463430 55.440 193 77 4 193 383 14 199 7.14e-61 195
MS.gene036663.t1 MTR_8g102520 38.462 377 166 13 20 386 2 322 1.28e-60 199
MS.gene036663.t1 MTR_4g114700 42.857 266 94 7 122 377 1 218 1.80e-55 182
MS.gene036663.t1 MTR_7g079370 40.057 352 168 15 55 380 16 350 3.04e-55 186
MS.gene036663.t1 MTR_1g055175 49.754 203 93 6 189 386 3 201 7.16e-55 180
MS.gene036663.t1 MTR_4g117530 42.742 248 93 5 147 386 47 253 1.15e-52 176
MS.gene036663.t1 MTR_7g079400 43.431 274 135 9 127 386 70 337 3.93e-52 177
MS.gene036663.t1 MTR_2g048580 35.789 380 182 17 25 386 7 342 7.16e-51 174
MS.gene036663.t1 MTR_1g055250 47.739 199 85 8 168 355 49 239 2.14e-44 156
MS.gene036663.t1 MTR_7g117720 44.495 218 85 9 16 222 1 193 1.75e-40 144
MS.gene036663.t1 MTR_7g117720 52.336 107 46 3 279 380 165 271 9.95e-20 88.6
MS.gene036663.t1 MTR_7g079420 38.628 277 114 12 129 386 905 1144 5.09e-40 152
MS.gene036663.t1 MTR_4g117430 50.633 158 70 4 130 285 3 154 9.93e-40 139
MS.gene036663.t1 MTR_4g122860 41.429 210 90 5 182 386 139 320 1.56e-38 141
MS.gene036663.t1 MTR_4g122860 43.689 103 53 3 12 111 56 156 4.34e-13 70.1
MS.gene036663.t1 MTR_4g118360 52.308 130 56 3 259 386 1 126 2.38e-34 124
MS.gene036663.t1 MTR_5g023000 62.000 100 36 1 287 386 2 99 3.52e-34 122
MS.gene036663.t1 MTR_8g098830 44.242 165 81 6 195 353 35 194 1.05e-29 114
MS.gene036663.t1 MTR_8g101580 27.487 382 226 17 21 378 40 394 1.30e-29 118
MS.gene036663.t1 MTR_2g021150 28.150 373 238 16 22 378 10 368 1.63e-28 115
MS.gene036663.t1 MTR_5g022420 29.395 347 204 17 22 350 23 346 2.82e-28 114
MS.gene036663.t1 MTR_3g009310 29.193 322 202 13 4 313 19 326 9.98e-28 113
MS.gene036663.t1 MTR_5g011200 30.330 333 186 15 1 314 1 306 3.28e-27 111
MS.gene036663.t1 MTR_3g036290 28.483 323 191 15 1 313 1 293 6.43e-27 110
MS.gene036663.t1 MTR_1g094210 25.876 371 232 13 24 378 55 398 8.56e-27 110
MS.gene036663.t1 MTR_1g097490 27.493 371 222 15 26 378 49 390 1.36e-26 110
MS.gene036663.t1 MTR_1g094210 26.301 346 215 12 24 353 55 376 1.66e-26 110
MS.gene036663.t1 MTR_4g107820 28.841 371 225 16 26 378 36 385 5.18e-26 108
MS.gene036663.t1 MTR_4g107820 28.841 371 225 16 26 378 36 385 5.21e-26 108
MS.gene036663.t1 MTR_4g107780 28.841 371 225 16 26 378 36 385 5.21e-26 108
MS.gene036663.t1 MTR_4g107780 28.841 371 225 16 26 378 36 385 5.28e-26 108
MS.gene036663.t1 MTR_3g009240 30.795 302 175 12 22 309 31 312 7.74e-26 107
MS.gene036663.t1 MTR_4g108820 28.483 323 169 13 24 333 40 313 1.07e-25 106
MS.gene036663.t1 MTR_2g426020 26.768 396 238 15 26 385 6 385 1.50e-25 107
MS.gene036663.t1 MTR_1g097560 29.917 361 197 18 1 335 1 331 1.66e-25 106
MS.gene036663.t1 MTR_2g021155 31.063 367 210 19 21 370 31 371 2.04e-25 108
MS.gene036663.t1 MTR_1g097330 31.077 325 194 13 24 335 14 321 3.01e-25 106
MS.gene036663.t1 MTR_4g133170 28.198 344 204 17 26 347 4 326 5.44e-25 105
MS.gene036663.t1 MTR_4g109290 39.766 171 61 6 19 184 2 135 1.67e-24 99.8
MS.gene036663.t1 MTR_4g109290 67.273 55 16 1 332 386 136 188 3.53e-15 73.6
MS.gene036663.t1 MTR_3g007410 27.053 414 236 18 1 379 21 403 2.87e-24 103
MS.gene036663.t1 MTR_3g006670 29.412 306 180 12 22 309 45 332 3.00e-24 103
MS.gene036663.t1 MTR_3g007330 28.852 305 183 11 22 313 44 327 3.10e-24 103
MS.gene036663.t1 MTR_7g079450 45.775 142 70 4 245 386 3 137 3.38e-24 97.4
MS.gene036663.t1 MTR_4g037465 28.680 394 219 15 8 358 2 376 6.10e-24 102
MS.gene036663.t1 MTR_3g007360 26.829 410 242 16 1 379 21 403 6.62e-24 102
MS.gene036663.t1 MTR_1g050542 26.230 366 242 12 24 378 56 404 7.09e-24 102
MS.gene036663.t1 MTR_1g056710 27.941 340 198 13 1 314 1 319 1.19e-23 101
MS.gene036663.t1 MTR_7g056820 26.796 362 224 12 24 355 5 355 1.72e-23 100
MS.gene036663.t1 MTR_6g004660 27.182 401 224 16 15 386 2 363 1.82e-23 100
MS.gene036663.t1 MTR_6g065980 27.740 292 188 10 21 309 11 282 1.90e-23 100
MS.gene036663.t1 MTR_8g467140 28.526 312 185 12 25 318 31 322 4.86e-23 99.0
MS.gene036663.t1 MTR_4g061340 28.228 333 175 16 22 325 22 319 4.98e-23 99.8
MS.gene036663.t1 MTR_7g013590 29.118 340 200 15 1 314 1 325 7.13e-23 99.8
MS.gene036663.t1 MTR_5g069120 39.362 188 83 9 36 203 1 177 7.71e-23 94.7
MS.gene036663.t1 MTR_2g028130 26.933 401 239 17 26 383 5 394 7.76e-23 99.8
MS.gene036663.t1 MTR_7g407070 28.435 313 192 12 22 309 28 333 9.79e-23 99.0
MS.gene036663.t1 MTR_3g013740 29.677 310 187 13 26 314 44 343 1.28e-22 99.0
MS.gene036663.t1 MTR_6g090180 24.762 420 246 13 13 379 32 434 1.46e-22 99.0
MS.gene036663.t1 MTR_2g024110 26.667 390 231 18 26 383 4 370 1.75e-22 98.2
MS.gene036663.t1 MTR_7g066850 25.320 391 232 13 10 355 7 382 2.24e-22 98.6
MS.gene036663.t1 MTR_2g028160 29.032 341 201 14 26 332 5 338 2.95e-22 97.8
MS.gene036663.t1 MTR_1g068835 28.165 316 186 15 26 321 4 298 3.43e-22 97.4
MS.gene036663.t1 MTR_0667s0010 24.810 395 243 14 26 383 6 383 5.14e-22 97.1
MS.gene036663.t1 MTR_3g010970 30.201 298 171 12 28 314 50 321 5.81e-22 96.7
MS.gene036663.t1 MTR_6g027910 27.296 392 220 17 26 378 9 374 9.42e-22 95.9
MS.gene036663.t1 MTR_3g083010 26.131 398 243 13 26 380 6 395 1.02e-21 96.3
MS.gene036663.t1 MTR_1g054725 25.575 391 248 16 11 378 5 375 1.41e-21 95.5
MS.gene036663.t1 MTR_3g007430 26.948 308 179 13 28 313 45 328 1.52e-21 95.5
MS.gene036663.t1 MTR_5g057710 29.043 303 184 12 26 314 46 331 1.60e-21 95.5
MS.gene036663.t1 MTR_3g011060 27.976 336 205 15 2 314 4 325 1.62e-21 95.5
MS.gene036663.t1 MTR_4g055060 26.433 314 187 10 24 313 28 321 1.80e-21 95.5
MS.gene036663.t1 MTR_3g036430 28.716 296 167 10 24 314 18 274 1.81e-21 94.7
MS.gene036663.t1 MTR_3g030240 26.611 357 213 15 4 348 17 336 1.98e-21 95.1
MS.gene036663.t1 MTR_2g021770 26.024 415 249 16 16 383 4 407 2.16e-21 95.5
MS.gene036663.t1 MTR_3g010390 27.937 315 196 11 22 313 29 335 2.46e-21 95.1
MS.gene036663.t1 MTR_2g021190 25.668 374 239 14 24 378 19 372 2.58e-21 94.7
MS.gene036663.t1 MTR_3g006500 26.263 396 210 19 24 378 15 369 2.78e-21 94.7
MS.gene036663.t1 MTR_3g010620 27.660 329 188 14 4 315 12 307 3.69e-21 94.4
MS.gene036663.t1 MTR_1g068875 26.087 322 196 12 26 323 4 307 4.23e-21 94.4
MS.gene036663.t1 MTR_2g055970 26.124 356 232 11 13 352 198 538 5.06e-21 95.1
MS.gene036663.t1 MTR_2g078900 26.623 308 189 12 22 314 29 314 6.58e-21 93.2
MS.gene036663.t1 MTR_3g024110 27.124 306 192 14 19 314 94 378 6.62e-21 94.4
MS.gene036663.t1 MTR_3g014540 25.962 312 192 10 22 314 25 316 7.16e-21 93.6
MS.gene036663.t1 MTR_7g070880 26.712 438 221 21 19 379 7 421 7.25e-21 94.0
MS.gene036663.t1 MTR_6g034720 47.009 117 53 2 153 260 53 169 7.33e-21 90.5
MS.gene036663.t1 MTR_7g070440 27.606 355 209 15 22 345 3 340 9.81e-21 93.2
MS.gene036663.t1 MTR_5g007610 29.620 395 205 19 24 378 39 400 1.18e-20 93.2
MS.gene036663.t1 MTR_5g057790 29.221 308 177 14 26 314 46 331 1.73e-20 92.4
MS.gene036663.t1 MTR_0128s0070 27.665 394 195 17 15 349 7 369 2.14e-20 92.4
MS.gene036663.t1 MTR_2g028140 27.607 326 181 16 26 309 5 317 2.45e-20 92.4
MS.gene036663.t1 MTR_2g046900 28.483 323 183 16 23 319 25 325 3.26e-20 91.7
MS.gene036663.t1 MTR_4g070550 28.116 345 185 16 26 323 5 333 4.25e-20 91.7
MS.gene036663.t1 MTR_2g046920 26.606 327 214 14 2 319 4 313 4.80e-20 90.9
MS.gene036663.t1 MTR_3g030250 26.333 300 189 11 24 314 35 311 5.64e-20 90.9
MS.gene036663.t1 MTR_3g436150 30.351 313 180 17 22 309 28 327 6.06e-20 90.9
MS.gene036663.t1 MTR_6g021880 26.997 363 232 14 37 378 31 381 6.81e-20 90.9
MS.gene036663.t1 MTR_4g030830 26.260 377 221 15 23 354 6 370 7.18e-20 90.9
MS.gene036663.t1 MTR_4g023430 55.556 81 35 1 307 386 142 222 8.09e-20 87.8
MS.gene036663.t1 MTR_4g023430 49.474 95 44 3 6 97 22 115 1.15e-14 73.2
MS.gene036663.t1 MTR_0267s0050 25.000 360 230 10 29 354 9 362 8.83e-20 90.5
MS.gene036663.t1 MTR_5g097680 24.235 425 243 18 25 383 16 427 1.09e-19 90.5
MS.gene036663.t1 MTR_3g011100 26.214 309 189 10 22 309 231 521 1.35e-19 90.9
MS.gene036663.t1 MTR_3g014570 25.723 311 192 10 22 313 25 315 1.36e-19 89.7
MS.gene036663.t1 MTR_3g010870 26.129 310 186 11 22 314 33 316 1.42e-19 89.7
MS.gene036663.t1 MTR_2g425980 26.382 398 234 17 26 383 5 383 1.50e-19 90.1
MS.gene036663.t1 MTR_4g122840 42.029 138 42 4 250 386 164 264 1.52e-19 87.8
MS.gene036663.t1 MTR_3g013770 28.339 307 191 11 24 314 31 324 1.66e-19 89.7
MS.gene036663.t1 MTR_3g464500 25.205 365 218 14 25 349 26 375 1.70e-19 89.7
MS.gene036663.t1 MTR_0128s0020 26.598 391 204 15 15 349 3 366 1.94e-19 89.4
MS.gene036663.t1 MTR_1g055070 27.525 396 208 16 18 378 41 392 2.20e-19 89.4
MS.gene036663.t1 MTR_3g006570 27.451 306 193 14 22 314 17 306 2.25e-19 89.4
MS.gene036663.t1 MTR_7g060940 27.649 387 229 14 26 377 22 392 2.41e-19 89.4
MS.gene036663.t1 MTR_3g072470 27.714 350 172 17 22 318 15 336 2.53e-19 89.4
MS.gene036663.t1 MTR_3g007300 28.191 376 197 18 22 378 45 366 2.69e-19 89.0
MS.gene036663.t1 MTR_7g070830 26.128 421 224 19 26 379 21 421 3.14e-19 89.0
MS.gene036663.t1 MTR_3g010590 25.980 408 231 18 4 378 16 385 4.15e-19 88.6
MS.gene036663.t1 MTR_1g088120 27.378 347 185 14 20 318 3 330 4.32e-19 88.6
MS.gene036663.t1 MTR_2g104340 26.238 404 233 18 25 383 13 396 4.99e-19 88.2
MS.gene036663.t1 MTR_2g426090 26.101 318 186 16 29 313 9 310 5.26e-19 88.6
MS.gene036663.t1 MTR_3g007270 26.250 320 185 12 24 313 45 343 5.46e-19 88.2
MS.gene036663.t1 MTR_3g023930 26.537 309 168 13 24 314 32 299 6.04e-19 87.8
MS.gene036663.t1 MTR_3g024150 27.520 367 232 15 28 378 37 385 6.17e-19 87.8
MS.gene036663.t1 MTR_8g013005 64.516 62 18 2 326 386 1 59 6.55e-19 80.1
MS.gene036663.t1 MTR_4g013185 27.660 376 205 15 20 335 3 371 7.43e-19 88.2
MS.gene036663.t1 MTR_7g007300 26.861 309 188 12 19 314 96 379 9.11e-19 87.8
MS.gene036663.t1 MTR_2g047832 28.219 365 202 18 1 325 1 345 1.12e-18 87.4
MS.gene036663.t1 MTR_4g013175 26.161 409 211 17 20 355 3 393 1.15e-18 87.4
MS.gene036663.t1 MTR_0129s0050 25.182 413 230 15 29 383 17 408 1.56e-18 87.0
MS.gene036663.t1 MTR_3g083640 27.742 310 182 16 22 314 51 335 1.56e-18 87.0
MS.gene036663.t1 MTR_1g054575 27.632 304 194 12 24 318 50 336 1.80e-18 87.8
MS.gene036663.t1 MTR_4g031770 24.837 306 194 10 26 314 4 290 1.81e-18 86.3
MS.gene036663.t1 MTR_8g099460 25.291 344 201 15 26 335 5 326 1.93e-18 86.7
MS.gene036663.t1 MTR_7g055987 27.794 349 188 14 21 333 15 335 2.75e-18 85.9
MS.gene036663.t1 MTR_7g078860 25.858 379 233 14 20 355 3 376 3.57e-18 85.9
MS.gene036663.t1 MTR_7g057270 28.923 325 178 16 26 311 26 336 3.81e-18 85.9
MS.gene036663.t1 MTR_1g055055 25.382 327 203 13 3 318 2 298 4.02e-18 85.1
MS.gene036663.t1 MTR_0129s0070 26.142 394 227 15 29 379 20 392 4.52e-18 85.5
MS.gene036663.t1 MTR_2g046830 26.282 312 209 11 23 325 22 321 5.35e-18 85.5
MS.gene036663.t1 MTR_1g068860 25.649 308 191 12 26 313 4 293 5.57e-18 85.1
MS.gene036663.t1 MTR_2g025960 27.211 294 172 12 127 383 5 293 6.00e-18 84.0
MS.gene036663.t1 MTR_4g013180 27.684 354 198 16 25 335 10 348 6.19e-18 85.5
MS.gene036663.t1 MTR_2g021050 27.410 332 187 16 26 332 5 307 7.16e-18 84.7
MS.gene036663.t1 MTR_2g029990 25.668 374 233 15 27 378 52 402 8.64e-18 84.7
MS.gene036663.t1 MTR_7g056503 27.318 399 245 21 15 378 9 397 9.66e-18 84.7
MS.gene036663.t1 MTR_2g022000 23.543 429 255 14 16 384 1 416 1.15e-17 84.7
MS.gene036663.t1 MTR_3g011020 25.507 345 189 14 1 316 3 308 1.18e-17 84.0
MS.gene036663.t1 MTR_0707s0020 26.047 430 235 20 25 380 25 445 1.35e-17 84.3
MS.gene036663.t1 MTR_5g057690 28.896 308 168 15 26 314 46 321 1.40e-17 84.0
MS.gene036663.t1 MTR_0760s0010 27.759 299 194 12 31 324 52 333 1.43e-17 84.0
MS.gene036663.t1 MTR_7g066030 25.063 399 218 17 4 347 2 374 2.08e-17 83.6
MS.gene036663.t1 MTR_7g061060 26.074 349 206 14 23 335 10 342 2.21e-17 83.6
MS.gene036663.t1 MTR_7g017040 25.000 400 235 16 25 379 15 394 2.43e-17 83.2
MS.gene036663.t1 MTR_7g055930 25.445 393 210 13 29 349 16 397 2.72e-17 83.6
MS.gene036663.t1 MTR_7g056003 25.635 394 204 17 29 357 18 387 2.75e-17 83.2
MS.gene036663.t1 MTR_0044s0300 27.358 318 191 14 24 324 36 330 2.88e-17 83.2
MS.gene036663.t1 MTR_3g013950 24.033 362 233 11 29 354 9 364 2.91e-17 83.2
MS.gene036663.t1 MTR_2g025420 25.281 356 199 14 26 332 6 343 3.12e-17 83.2
MS.gene036663.t1 MTR_3g010520 27.036 307 170 15 24 314 23 291 4.42e-17 82.0
MS.gene036663.t1 MTR_2g021800 25.412 425 243 18 16 379 1 412 5.35e-17 82.4
MS.gene036663.t1 MTR_1g115185 24.545 330 209 12 5 314 18 327 6.34e-17 82.0
MS.gene036663.t1 MTR_8g062660 25.382 327 180 14 23 314 19 316 6.76e-17 82.8
MS.gene036663.t1 MTR_8g012090 25.758 330 183 14 34 335 24 319 7.02e-17 81.3
MS.gene036663.t1 MTR_7g069550 25.984 381 209 18 26 354 14 373 7.92e-17 81.6
MS.gene036663.t1 MTR_7g062100 26.053 380 214 18 14 347 10 368 8.39e-17 81.6
MS.gene036663.t1 MTR_0097s0030 24.377 361 224 11 26 355 14 356 8.63e-17 81.6
MS.gene036663.t1 MTR_2g047240 24.377 361 224 11 26 355 14 356 8.63e-17 81.6
MS.gene036663.t1 MTR_3g010430 24.412 340 202 14 2 314 12 323 8.73e-17 81.6
MS.gene036663.t1 MTR_0054s0090 24.638 414 256 16 13 381 2 404 9.00e-17 81.6
MS.gene036663.t1 MTR_6g016285 26.634 413 200 22 19 355 11 396 1.16e-16 81.6
MS.gene036663.t1 MTR_4g028750 26.946 334 194 16 16 309 6 329 1.20e-16 81.3
MS.gene036663.t1 MTR_7g066840 25.926 378 231 16 14 355 11 375 1.30e-16 81.3
MS.gene036663.t1 MTR_2g026010 26.266 316 183 12 26 313 4 297 1.85e-16 80.9
MS.gene036663.t1 MTR_7g066000 25.683 366 214 16 13 335 8 358 2.04e-16 80.5
MS.gene036663.t1 MTR_4g028510 23.844 411 250 14 17 381 7 400 2.08e-16 80.9
MS.gene036663.t1 MTR_4g130330 23.441 401 246 16 25 381 6 389 2.44e-16 80.5
MS.gene036663.t1 MTR_3g464470 24.033 362 223 15 25 349 6 352 3.13e-16 79.7
MS.gene036663.t1 MTR_5g072060 27.019 359 215 16 25 354 5 345 3.29e-16 80.9
MS.gene036663.t1 MTR_4g024890 24.060 399 235 15 25 378 9 384 3.47e-16 79.7
MS.gene036663.t1 MTR_7g062060 27.596 337 195 15 23 318 9 337 3.55e-16 79.7
MS.gene036663.t1 MTR_3g030330 27.000 300 190 14 24 314 18 297 3.68e-16 79.7
MS.gene036663.t1 MTR_7g091640 24.518 363 204 14 9 321 8 350 3.99e-16 79.3
MS.gene036663.t1 MTR_7g061050 26.235 324 194 12 23 318 10 316 4.16e-16 79.7
MS.gene036663.t1 MTR_6g055210 24.706 340 209 15 4 308 2 329 4.17e-16 80.1
MS.gene036663.t1 MTR_7g445890 26.575 365 202 17 26 349 16 355 4.29e-16 79.3
MS.gene036663.t1 MTR_5g097350 26.371 383 220 16 35 379 25 383 5.03e-16 79.3
MS.gene036663.t1 MTR_5g097330 25.542 415 233 17 17 379 9 399 5.73e-16 79.3
MS.gene036663.t1 MTR_4g129190 26.005 423 206 19 26 379 6 390 5.79e-16 79.3
MS.gene036663.t1 MTR_5g046300 24.444 315 192 13 24 323 2 285 8.70e-16 78.2
MS.gene036663.t1 MTR_5g046290 24.444 315 192 13 24 323 2 285 8.70e-16 78.2
MS.gene036663.t1 MTR_1g115160 26.974 304 194 13 25 319 21 305 9.78e-16 78.2
MS.gene036663.t1 MTR_4g030090 28.358 335 179 17 16 309 1 315 9.80e-16 78.6
MS.gene036663.t1 MTR_5g057020 28.165 316 155 16 26 314 46 316 9.87e-16 78.2
MS.gene036663.t1 MTR_5g069390 24.146 410 257 15 18 383 18 417 1.10e-15 79.0
MS.gene036663.t1 MTR_4g117550 25.495 404 210 19 25 383 16 373 1.11e-15 78.2
MS.gene036663.t1 MTR_7g056390 26.724 348 179 16 22 318 14 336 1.16e-15 78.6
MS.gene036663.t1 MTR_2g426060 27.327 333 190 17 26 323 6 321 1.17e-15 78.6
MS.gene036663.t1 MTR_4g028680 25.074 339 202 13 17 313 7 335 1.38e-15 78.2
MS.gene036663.t1 MTR_7g060960 27.492 331 188 13 26 339 32 327 1.56e-15 77.8
MS.gene036663.t1 MTR_4g028660 23.739 337 208 13 17 313 7 334 1.56e-15 77.8
MS.gene036663.t1 MTR_4g027450 23.739 337 208 13 17 313 7 334 1.56e-15 77.8
MS.gene036663.t1 MTR_2g043400 25.326 383 201 19 29 356 26 378 1.87e-15 77.8
MS.gene036663.t1 MTR_3g030350 25.914 301 191 10 22 309 31 312 2.23e-15 77.4
MS.gene036663.t1 MTR_3g437520 23.866 419 226 20 29 375 26 423 2.27e-15 77.8
MS.gene036663.t1 MTR_8g064890 25.543 368 222 15 17 345 7 361 2.46e-15 77.4
MS.gene036663.t1 MTR_5g046260 23.288 365 201 14 24 378 2 297 2.76e-15 76.3
MS.gene036663.t1 MTR_2g021252 25.134 374 221 16 28 379 49 385 3.04e-15 77.0
MS.gene036663.t1 MTR_8g073550 28.218 202 133 6 20 214 24 220 3.24e-15 74.7
MS.gene036663.t1 MTR_3g096280 25.352 355 222 16 38 378 17 342 3.46e-15 76.6
MS.gene036663.t1 MTR_5g009060 27.692 325 187 16 24 309 23 338 3.46e-15 77.0
MS.gene036663.t1 MTR_5g056020 24.424 434 241 20 14 378 5 420 3.75e-15 77.4
MS.gene036663.t1 MTR_6g086825 26.150 413 230 17 25 383 69 460 3.75e-15 77.0
MS.gene036663.t1 MTR_2g426070 27.219 338 204 14 27 332 7 334 4.15e-15 76.6
MS.gene036663.t1 MTR_5g059430 23.810 420 257 16 18 384 18 427 4.20e-15 76.6
MS.gene036663.t1 MTR_1g055200 52.113 71 31 2 122 191 1 69 4.51e-15 71.2
MS.gene036663.t1 MTR_0464s0020 25.731 342 183 15 29 318 26 348 5.54e-15 76.6
MS.gene036663.t1 MTR_7g061010 26.064 376 212 16 26 361 22 371 5.59e-15 76.3
MS.gene036663.t1 MTR_8g063440 25.773 388 236 17 25 379 11 379 5.91e-15 76.3
MS.gene036663.t1 MTR_7g056760 24.879 414 258 17 6 378 3 404 6.79e-15 75.9
MS.gene036663.t1 MTR_3g096250 26.359 368 191 17 24 378 45 345 7.30e-15 75.5
MS.gene036663.t1 MTR_8g066440 24.112 394 239 15 9 357 6 384 7.40e-15 75.9
MS.gene036663.t1 MTR_5g069930 26.479 355 206 16 25 342 5 341 7.53e-15 75.9
MS.gene036663.t1 MTR_6g053240 23.397 312 206 11 22 314 24 321 8.61e-15 75.9
MS.gene036663.t1 MTR_3g036335 24.455 413 245 18 1 378 14 394 9.46e-15 75.5
MS.gene036663.t1 MTR_7g056290 25.575 348 183 15 22 318 18 340 1.01e-14 75.5
MS.gene036663.t1 MTR_1g007410 25.143 350 198 16 25 328 21 352 1.02e-14 75.5
MS.gene036663.t1 MTR_2g043410 26.357 387 192 18 29 356 25 377 1.15e-14 75.5
MS.gene036663.t1 MTR_7g017130 24.713 348 211 12 1 313 1 332 1.22e-14 75.1
MS.gene036663.t1 MTR_7g016930 27.900 319 182 13 17 310 10 305 1.38e-14 74.7
MS.gene036663.t1 MTR_0831s0010 25.964 389 237 16 1 354 22 394 1.48e-14 75.1
MS.gene036663.t1 MTR_7g017170 24.713 348 211 12 1 313 1 332 1.49e-14 75.1
MS.gene036663.t1 MTR_1g112930 26.645 304 189 12 24 314 23 305 1.85e-14 74.7
MS.gene036663.t1 MTR_2g034700 26.190 336 203 15 25 335 13 328 1.97e-14 74.3
MS.gene036663.t1 MTR_7g061090 26.113 337 193 14 14 309 10 331 2.36e-14 74.3
MS.gene036663.t1 MTR_7g111700 25.385 390 246 15 13 383 2 365 2.39e-14 73.9
MS.gene036663.t1 MTR_8g046310 24.691 324 199 12 17 313 7 312 2.49e-14 74.3
MS.gene036663.t1 MTR_4g033495 27.387 398 230 22 26 381 27 407 2.74e-14 74.3
MS.gene036663.t1 MTR_7g091630 23.410 346 211 12 15 321 21 351 2.96e-14 74.3
MS.gene036663.t1 MTR_5g069760 23.699 346 206 14 25 335 5 327 3.79e-14 73.6
MS.gene036663.t1 MTR_7g066010 21.739 391 212 12 13 356 8 351 3.97e-14 73.6
MS.gene036663.t1 MTR_2g021210 25.348 359 226 16 7 349 65 397 4.04e-14 73.9
MS.gene036663.t1 MTR_2g078850 25.325 308 182 12 29 314 33 314 4.83e-14 73.2
MS.gene036663.t1 MTR_0064s0160 25.595 336 207 13 10 309 26 354 4.96e-14 73.6
MS.gene036663.t1 MTR_6g013270 23.948 309 209 12 20 314 23 319 5.24e-14 73.2
MS.gene036663.t1 MTR_4g023100 60.345 58 19 1 328 385 65 118 5.68e-14 68.6
MS.gene036663.t1 MTR_0115s0020 26.966 267 157 9 26 262 10 268 6.52e-14 73.2
MS.gene036663.t1 MTR_7g067680 24.085 328 200 12 1 314 24 316 6.80e-14 72.8
MS.gene036663.t1 MTR_2g021950 23.969 388 245 18 29 379 19 393 9.06e-14 72.4
MS.gene036663.t1 MTR_0129s0120 25.208 361 210 13 29 347 20 362 9.14e-14 72.4
MS.gene036663.t1 MTR_0128s0010 24.872 390 229 15 14 358 9 379 9.47e-14 72.4
MS.gene036663.t1 MTR_7g077970 28.529 333 194 17 24 318 5 331 1.22e-13 72.4
MS.gene036663.t1 MTR_1g055375 24.918 305 198 13 28 314 6 297 2.04e-13 71.2
MS.gene036663.t1 MTR_4g030980 23.844 411 237 15 16 355 1 406 2.09e-13 71.6
MS.gene036663.t1 MTR_3g024130 25.941 239 151 9 89 313 24 250 2.13e-13 70.9
MS.gene036663.t1 MTR_3g024040 27.147 361 222 16 33 378 38 372 2.21e-13 71.2
MS.gene036663.t1 MTR_2g031680 23.926 326 198 14 26 323 6 309 2.34e-13 71.2
MS.gene036663.t1 MTR_1g114700 26.367 311 194 15 22 314 25 318 2.39e-13 71.2
MS.gene036663.t1 MTR_3g009260 26.625 323 178 13 22 323 36 320 2.73e-13 71.2
MS.gene036663.t1 MTR_2g104280 25.362 414 233 19 25 383 13 405 3.42e-13 70.9
MS.gene036663.t1 MTR_4g102410 23.691 401 250 16 25 381 60 448 3.45e-13 70.9
MS.gene036663.t1 MTR_0242s0060 26.606 327 188 16 25 311 8 322 3.62e-13 70.9
MS.gene036663.t1 MTR_0242s0040 26.606 327 188 16 25 311 8 322 3.62e-13 70.9
MS.gene036663.t1 MTR_2g078870 28.488 172 111 6 143 314 78 237 3.62e-13 70.1
MS.gene036663.t1 MTR_2g031720 24.289 387 242 19 26 383 6 370 5.04e-13 70.5
MS.gene036663.t1 MTR_2g006360 25.905 359 210 16 29 377 49 361 5.20e-13 70.1
MS.gene036663.t1 MTR_1g097370 29.665 209 123 11 169 357 135 339 6.95e-13 70.1
MS.gene036663.t1 MTR_5g024260 26.685 371 198 18 16 335 12 359 7.18e-13 70.1
MS.gene036663.t1 MTR_5g074850 23.181 371 215 15 29 347 38 390 7.82e-13 70.5
MS.gene036663.t1 MTR_6g048140 27.244 312 186 14 24 314 37 328 8.75e-13 69.7
MS.gene036663.t1 MTR_6g004210 25.378 331 197 13 37 330 36 353 1.06e-12 69.3
MS.gene036663.t1 MTR_3g023940 24.665 373 242 15 24 378 32 383 1.15e-12 69.3
MS.gene036663.t1 MTR_7g050480 26.364 330 190 13 10 309 6 312 1.28e-12 68.9
MS.gene036663.t1 MTR_5g096910 24.181 397 240 18 25 381 16 391 1.42e-12 68.9
MS.gene036663.t1 MTR_2g047892 23.797 395 220 19 12 353 6 372 1.59e-12 68.9
MS.gene036663.t1 MTR_2g461450 22.500 360 222 10 26 354 18 351 1.66e-12 68.6
MS.gene036663.t1 MTR_5g096900 25.402 311 185 14 25 305 11 304 2.01e-12 67.8
MS.gene036663.t1 MTR_5g096710 27.586 319 183 13 22 309 19 320 3.00e-12 67.8
MS.gene036663.t1 MTR_7g079640 23.889 360 208 16 8 334 2 328 3.35e-12 67.8
MS.gene036663.t1 MTR_6g048120 24.427 393 248 16 20 378 30 407 3.36e-12 67.8
MS.gene036663.t1 MTR_2g024100 29.101 189 108 7 143 309 122 306 3.49e-12 67.8
MS.gene036663.t1 MTR_4g080200 26.378 254 149 12 26 262 3 235 3.87e-12 67.4
MS.gene036663.t1 MTR_1g055145 46.667 75 38 2 226 300 130 202 4.47e-12 66.6
MS.gene036663.t1 MTR_5g057643 28.085 235 141 9 26 246 46 266 4.72e-12 66.2
MS.gene036663.t1 MTR_7g066100 24.814 403 239 17 25 380 10 395 5.44e-12 67.0
MS.gene036663.t1 MTR_6g007150 30.000 200 124 8 128 315 72 267 5.86e-12 66.6
MS.gene036663.t1 MTR_5g074800 26.389 288 160 12 125 375 64 336 6.07e-12 66.6
MS.gene036663.t1 MTR_3g010440 32.867 143 78 6 22 156 22 154 7.05e-12 66.2
MS.gene036663.t1 MTR_5g057040 29.082 196 108 6 26 212 46 219 9.09e-12 67.4
MS.gene036663.t1 MTR_2g047878 25.128 390 226 17 17 378 12 363 1.08e-11 66.2
MS.gene036663.t1 MTR_7g050520 26.415 318 181 13 22 309 18 312 1.16e-11 66.2
MS.gene036663.t1 MTR_2g010920 23.171 410 253 16 26 378 20 424 1.36e-11 66.2
MS.gene036663.t1 MTR_3g030310 24.214 318 197 12 20 314 15 311 1.45e-11 65.9
MS.gene036663.t1 MTR_6g017305 25.847 236 142 10 144 347 18 252 1.74e-11 64.7
MS.gene036663.t1 MTR_7g056710 24.854 342 218 14 20 335 13 341 1.75e-11 65.5
MS.gene036663.t1 MTR_5g008530 64.286 56 17 2 26 79 18 72 1.85e-11 59.7
MS.gene036663.t1 MTR_7g052150 26.168 321 177 16 26 311 22 317 2.46e-11 65.1
MS.gene036663.t1 MTR_1g037540 23.810 378 225 14 29 354 8 374 2.51e-11 65.1
MS.gene036663.t1 MTR_7g078040 24.926 337 206 13 26 318 9 342 2.59e-11 65.1
MS.gene036663.t1 MTR_1g061330 24.219 384 238 18 26 383 4 360 3.51e-11 64.7
MS.gene036663.t1 MTR_1g442850 24.176 364 213 17 29 349 8 351 3.74e-11 64.3
MS.gene036663.t1 MTR_4g019990 24.789 355 208 13 25 335 5 344 3.89e-11 64.3
MS.gene036663.t1 MTR_6g088385 24.727 275 163 13 141 380 55 320 5.17e-11 63.5
MS.gene036663.t1 MTR_4g008790 24.570 407 223 16 14 355 26 413 5.38e-11 64.3
MS.gene036663.t1 MTR_6g065510 24.254 268 160 10 143 379 76 331 5.59e-11 63.5
MS.gene036663.t1 MTR_3g080370 25.000 408 226 16 11 355 6 396 5.86e-11 64.3
MS.gene036663.t1 MTR_7g078840 26.471 340 190 15 25 311 9 341 6.33e-11 63.9
MS.gene036663.t1 MTR_3g010870 26.667 240 132 10 22 244 33 245 6.45e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036663.t1 AT3G06240 26.202 416 258 12 3 378 13 419 1.80e-29 118
MS.gene036663.t1 AT3G16210 27.219 338 205 15 25 352 4 310 1.85e-22 97.8
MS.gene036663.t1 AT4G12560 27.129 317 185 14 26 313 4 303 1.02e-20 93.6
MS.gene036663.t1 AT4G12560 27.129 317 185 14 26 313 4 303 1.02e-20 93.6
MS.gene036663.t1 AT4G12560 27.129 317 185 14 26 313 4 303 1.02e-20 93.6
MS.gene036663.t1 AT3G23880 28.859 298 194 12 26 314 14 302 1.56e-17 83.6
MS.gene036663.t1 AT3G10430 27.740 292 166 12 26 300 5 268 1.86e-15 77.4
MS.gene036663.t1 AT5G49610 25.706 354 203 18 26 352 9 329 5.74e-12 67.0
MS.gene036663.t1 AT4G19930 22.642 371 221 15 13 335 14 366 2.74e-11 65.1
MS.gene036663.t1 AT3G07870 22.756 312 198 10 26 309 28 324 2.96e-11 65.1
MS.gene036663.t1 AT3G49980 24.611 321 195 12 26 321 6 304 7.41e-11 63.5
MS.gene036663.t1 AT3G49980 24.611 321 195 12 26 321 5 303 7.65e-11 63.5
MS.gene036663.t1 AT3G17480 23.839 323 219 15 16 324 2 311 8.50e-11 63.5
MS.gene036663.t1 AT1G47790 22.635 296 200 11 19 304 18 294 9.14e-11 63.5

Find 83 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATTGCATTTGATTTAA+TGG 0.081393 8.1:+10707380 MS.gene036663:CDS
TTGGAGAATTTCTCAGTTTA+TGG 0.121537 8.1:+10707475 MS.gene036663:CDS
CATGGGGATTTCATAAAATT+AGG 0.147989 8.1:-10706964 None:intergenic
AATTGTAATTTGTGGGTATT+TGG 0.170321 8.1:+10707456 MS.gene036663:CDS
TGTAGAGCATATTGGGTAAA+AGG 0.214064 8.1:-10707610 None:intergenic
TTCCATAATCTATATGGATT+TGG 0.215138 8.1:+10707135 MS.gene036663:CDS
AATAGTTTCCATAATCTATA+TGG 0.238904 8.1:+10707129 MS.gene036663:CDS
ACCCAAATCCATATAGATTA+TGG 0.246161 8.1:-10707137 None:intergenic
ACGACACACACTCGTAAAAT+TGG 0.251398 8.1:+10706658 MS.gene036663:CDS
TGTCATTATACTTCAGTAAC+TGG 0.304036 8.1:-10707668 None:intergenic
TCCATAATCTATATGGATTT+GGG 0.308248 8.1:+10707136 MS.gene036663:CDS
ATGGGGATTTCATAAAATTA+GGG 0.319960 8.1:-10706963 None:intergenic
TGGAAACTATTTGAATGATT+AGG 0.321894 8.1:-10707117 None:intergenic
TTCTAGAGCATGGATCATTC+TGG 0.332187 8.1:+10707700 MS.gene036663:CDS
AGAGTAGGGTCACTCTTTAA+TGG 0.338450 8.1:+10707312 MS.gene036663:CDS
ACACTCGTAAAATTGGAAAA+AGG 0.339804 8.1:+10706665 MS.gene036663:CDS
TGTTTGTAAACTCCAGTTGA+TGG 0.347916 8.1:-10707081 None:intergenic
CTAATGAAAGAGTTGAAATA+TGG 0.360862 8.1:+10707511 MS.gene036663:CDS
TCTTTAATGGAGCTATTCAT+TGG 0.379072 8.1:+10707325 MS.gene036663:CDS
TTCATTTGGAATCCATCAAC+TGG 0.380867 8.1:+10707069 MS.gene036663:CDS
TGGAGAATTTCTCAGTTTAT+GGG 0.382420 8.1:+10707476 MS.gene036663:CDS
TAAAACTCTACAAGAGTGTT+TGG 0.387771 8.1:-10706851 None:intergenic
TGGGACGGTCCACTTCCATT+TGG 0.399776 8.1:+10707720 MS.gene036663:CDS
TCAGTTTATGGGCCAACGAT+TGG 0.400528 8.1:+10707487 MS.gene036663:CDS
ATCCCAAGTGACCGTGTATA+CGG 0.401974 8.1:+10707743 MS.gene036663:CDS
CAGTTTATGGGCCAACGATT+GGG 0.413913 8.1:+10707488 MS.gene036663:CDS
AACTAATAATTGTAATTTGT+GGG 0.419232 8.1:+10707449 MS.gene036663:CDS
AGAGTATAAATGTCATCAAC+AGG 0.427177 8.1:-10707585 None:intergenic
ATTTCATAAAATTAGGGATC+GGG 0.432363 8.1:-10706957 None:intergenic
TCAAATGCGTTTGTAAGCCT+TGG 0.432851 8.1:+10706782 MS.gene036663:CDS
CAACTAATAATTGTAATTTG+TGG 0.434909 8.1:+10707448 MS.gene036663:CDS
TAATGGAGCTATTCATTGGT+TGG 0.434950 8.1:+10707329 MS.gene036663:CDS
TAACGAGCTATCCGCATTTG+AGG 0.440698 8.1:+10707211 MS.gene036663:CDS
TTTCATTGAGAGATAATACT+TGG 0.452810 8.1:+10707238 MS.gene036663:CDS
TCGACACGAACTTGAATTTG+TGG 0.455672 8.1:-10707013 None:intergenic
TTAGGCTTGCACATTGTCAC+CGG 0.455704 8.1:-10707784 None:intergenic
GGATTCCAAATGAAGAGGTC+TGG 0.463765 8.1:-10707060 None:intergenic
TTAGAGATGCCTTTACCTGA+TGG 0.465602 8.1:+10707414 MS.gene036663:CDS
ATCAATTCAAGAGGCAGATA+AGG 0.472857 8.1:-10706715 None:intergenic
CACTATTCTGTTCACAGAGT+AGG 0.474058 8.1:+10707297 MS.gene036663:CDS
ACTATTCTGTTCACAGAGTA+GGG 0.481716 8.1:+10707298 MS.gene036663:CDS
ATAAAATTAGGGATCGGGTT+GGG 0.482578 8.1:-10706952 None:intergenic
ACTCCGTATACACGGTCACT+TGG 0.482724 8.1:-10707746 None:intergenic
TCAAATTCTGTTGAGGTTGG+CGG 0.482772 8.1:+10706741 MS.gene036663:CDS
ACAGAATAGTGAAGAACATA+GGG 0.499848 8.1:-10707285 None:intergenic
TCTAGAGCATGGATCATTCT+GGG 0.502981 8.1:+10707701 MS.gene036663:CDS
AATTACAATTATTAGTTGCA+TGG 0.507420 8.1:-10707443 None:intergenic
GTTGCATGGTCAAAACCATC+AGG 0.515710 8.1:-10707429 None:intergenic
AATACAAAGTGCATTCGTCT+TGG 0.518219 8.1:+10707544 MS.gene036663:CDS
CATAAAATTAGGGATCGGGT+TGG 0.519790 8.1:-10706953 None:intergenic
ACGGTCACTTGGGATCCAAA+TGG 0.522598 8.1:-10707735 None:intergenic
GAGTCTTTGCTTTCACTCCC+CGG 0.523355 8.1:+10707765 MS.gene036663:CDS
AGTTCAAATTCTGTTGAGGT+TGG 0.526320 8.1:+10706738 MS.gene036663:CDS
ATTAAGAGATGATTACTTGG+TGG 0.531811 8.1:+10707167 MS.gene036663:CDS
TAATGAAAGAGTTGAAATAT+GGG 0.539316 8.1:+10707512 MS.gene036663:CDS
AACAGAATAGTGAAGAACAT+AGG 0.540252 8.1:-10707286 None:intergenic
TCAATTAAGAGATGATTACT+TGG 0.542251 8.1:+10707164 MS.gene036663:CDS
ACTTGGGATCCAAATGGAAG+TGG 0.547144 8.1:-10707729 None:intergenic
GATTTCATAAAATTAGGGAT+CGG 0.554332 8.1:-10706958 None:intergenic
AACTCTACAAGAGTGTTTGG+CGG 0.557495 8.1:-10706848 None:intergenic
TGGTCAAAACCATCAGGTAA+AGG 0.562825 8.1:-10707423 None:intergenic
TAGGCTTGCACATTGTCACC+GGG 0.563652 8.1:-10707783 None:intergenic
AAATCTAAAGATAGTGTAGT+CGG 0.565833 8.1:-10706892 None:intergenic
ATTTGAACTATCAATTCAAG+AGG 0.571814 8.1:-10706724 None:intergenic
CTCCGTATACACGGTCACTT+GGG 0.572195 8.1:-10707745 None:intergenic
TGATAGTTCAAATTCTGTTG+AGG 0.572350 8.1:+10706734 MS.gene036663:CDS
AGAGGACAGCTTCTAGAGCA+TGG 0.578862 8.1:+10707690 MS.gene036663:CDS
TTTGAATGATTAGGAGACAA+AGG 0.589171 8.1:-10707108 None:intergenic
TCTTTCATTAGCCCAATCGT+TGG 0.591565 8.1:-10707499 None:intergenic
TCCACTACATGAAAATCACA+TGG 0.604640 8.1:-10706982 None:intergenic
ACAAATTCAAGTTCGTGTCG+AGG 0.613489 8.1:+10707015 MS.gene036663:CDS
TAATACTTGGAATGAACTTG+AGG 0.624617 8.1:+10707251 MS.gene036663:CDS
TCAAGAGGCAGATAAGGCTG+TGG 0.625428 8.1:-10706709 None:intergenic
GTCATTATACTTCAGTAACT+GGG 0.631722 8.1:-10707667 None:intergenic
AAGCAAAGACTCCGTATACA+CGG 0.632600 8.1:-10707754 None:intergenic
TTGATGGATTCCAAATGAAG+AGG 0.638498 8.1:-10707065 None:intergenic
GAGCATGGATCATTCTGGGA+CGG 0.652794 8.1:+10707705 MS.gene036663:CDS
CCACTACATGAAAATCACAT+GGG 0.654062 8.1:-10706981 None:intergenic
CACTACATGAAAATCACATG+GGG 0.668813 8.1:-10706980 None:intergenic
TTACTGAAGTATAATGACAG+AGG 0.710690 8.1:+10707672 MS.gene036663:CDS
TTAGAGATAAGAGAAAACCA+AGG 0.720239 8.1:-10706799 None:intergenic
AGGCTTGCACATTGTCACCG+GGG 0.736430 8.1:-10707782 None:intergenic
CAGAATAGTGAAGAACATAG+GGG 0.739160 8.1:-10707284 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTAATAATTGTAATTTGT+GGG + chr8.1:10707449-10707468 MS.gene036663:CDS 15.0%
!!! TATAATTGCATTTGATTTAA+TGG + chr8.1:10707380-10707399 MS.gene036663:CDS 15.0%
!! AATAGTTTCCATAATCTATA+TGG + chr8.1:10707129-10707148 MS.gene036663:CDS 20.0%
!! AATTACAATTATTAGTTGCA+TGG - chr8.1:10707446-10707465 None:intergenic 20.0%
!! CAACTAATAATTGTAATTTG+TGG + chr8.1:10707448-10707467 MS.gene036663:CDS 20.0%
!! TAATGAAAGAGTTGAAATAT+GGG + chr8.1:10707512-10707531 MS.gene036663:CDS 20.0%
! AAATCTAAAGATAGTGTAGT+CGG - chr8.1:10706895-10706914 None:intergenic 25.0%
! AATGAAAAAAACCTCAAATG+CGG - chr8.1:10707225-10707244 None:intergenic 25.0%
! ATGGGGATTTCATAAAATTA+GGG - chr8.1:10706966-10706985 None:intergenic 25.0%
! ATTTCATAAAATTAGGGATC+GGG - chr8.1:10706960-10706979 None:intergenic 25.0%
! ATTTGAACTATCAATTCAAG+AGG - chr8.1:10706727-10706746 None:intergenic 25.0%
! CTAATGAAAGAGTTGAAATA+TGG + chr8.1:10707511-10707530 MS.gene036663:CDS 25.0%
! GATTTCATAAAATTAGGGAT+CGG - chr8.1:10706961-10706980 None:intergenic 25.0%
! TCAATTAAGAGATGATTACT+TGG + chr8.1:10707164-10707183 MS.gene036663:CDS 25.0%
! TCCATAATCTATATGGATTT+GGG + chr8.1:10707136-10707155 MS.gene036663:CDS 25.0%
! TGGAAACTATTTGAATGATT+AGG - chr8.1:10707120-10707139 None:intergenic 25.0%
! TTCCATAATCTATATGGATT+TGG + chr8.1:10707135-10707154 MS.gene036663:CDS 25.0%
! TTTCATTGAGAGATAATACT+TGG + chr8.1:10707238-10707257 MS.gene036663:CDS 25.0%
!! AATTGTAATTTGTGGGTATT+TGG + chr8.1:10707456-10707475 MS.gene036663:CDS 25.0%
!!! ATCTTTAGATTTTGAAGCAT+TGG + chr8.1:10706903-10706922 MS.gene036663:CDS 25.0%
!!! CATTTTTTGTAGAGCATATT+GGG - chr8.1:10707620-10707639 None:intergenic 25.0%
AACAGAATAGTGAAGAACAT+AGG - chr8.1:10707289-10707308 None:intergenic 30.0%
ACAAAAAATGGTGACATTCT+TGG + chr8.1:10707630-10707649 MS.gene036663:CDS 30.0%
ACACTCGTAAAATTGGAAAA+AGG + chr8.1:10706665-10706684 MS.gene036663:CDS 30.0%
ACAGAATAGTGAAGAACATA+GGG - chr8.1:10707288-10707307 None:intergenic 30.0%
ACCCAAATCCATATAGATTA+TGG - chr8.1:10707140-10707159 None:intergenic 30.0%
AGAGTATAAATGTCATCAAC+AGG - chr8.1:10707588-10707607 None:intergenic 30.0%
ATTAAGAGATGATTACTTGG+TGG + chr8.1:10707167-10707186 MS.gene036663:CDS 30.0%
CATGGGGATTTCATAAAATT+AGG - chr8.1:10706967-10706986 None:intergenic 30.0%
CCAATATGCTCTACAAAAAA+TGG + chr8.1:10707618-10707637 MS.gene036663:CDS 30.0%
GTCATTATACTTCAGTAACT+GGG - chr8.1:10707670-10707689 None:intergenic 30.0%
TAATACTTGGAATGAACTTG+AGG + chr8.1:10707251-10707270 MS.gene036663:CDS 30.0%
TCTTTAATGGAGCTATTCAT+TGG + chr8.1:10707325-10707344 MS.gene036663:CDS 30.0%
TGATAGTTCAAATTCTGTTG+AGG + chr8.1:10706734-10706753 MS.gene036663:CDS 30.0%
TGGAGAATTTCTCAGTTTAT+GGG + chr8.1:10707476-10707495 MS.gene036663:CDS 30.0%
TGTCATTATACTTCAGTAAC+TGG - chr8.1:10707671-10707690 None:intergenic 30.0%
TTACTGAAGTATAATGACAG+AGG + chr8.1:10707672-10707691 MS.gene036663:CDS 30.0%
TTAGAGATAAGAGAAAACCA+AGG - chr8.1:10706802-10706821 None:intergenic 30.0%
TTGGAGAATTTCTCAGTTTA+TGG + chr8.1:10707475-10707494 MS.gene036663:CDS 30.0%
TTTGAATGATTAGGAGACAA+AGG - chr8.1:10707111-10707130 None:intergenic 30.0%
!! TAAAACTCTACAAGAGTGTT+TGG - chr8.1:10706854-10706873 None:intergenic 30.0%
!!! CCATTTTTTGTAGAGCATAT+TGG - chr8.1:10707621-10707640 None:intergenic 30.0%
AATACAAAGTGCATTCGTCT+TGG + chr8.1:10707544-10707563 MS.gene036663:CDS 35.0%
ACTATTCTGTTCACAGAGTA+GGG + chr8.1:10707298-10707317 MS.gene036663:CDS 35.0%
AGTTCAAATTCTGTTGAGGT+TGG + chr8.1:10706738-10706757 MS.gene036663:CDS 35.0%
ATAAAATTAGGGATCGGGTT+GGG - chr8.1:10706955-10706974 None:intergenic 35.0%
ATCAATTCAAGAGGCAGATA+AGG - chr8.1:10706718-10706737 None:intergenic 35.0%
CACTACATGAAAATCACATG+GGG - chr8.1:10706983-10707002 None:intergenic 35.0%
CAGAATAGTGAAGAACATAG+GGG - chr8.1:10707287-10707306 None:intergenic 35.0%
CCACTACATGAAAATCACAT+GGG - chr8.1:10706984-10707003 None:intergenic 35.0%
TAATGGAGCTATTCATTGGT+TGG + chr8.1:10707329-10707348 MS.gene036663:CDS 35.0%
TCCACTACATGAAAATCACA+TGG - chr8.1:10706985-10707004 None:intergenic 35.0%
TGTAGAGCATATTGGGTAAA+AGG - chr8.1:10707613-10707632 None:intergenic 35.0%
TGTTTGTAAACTCCAGTTGA+TGG - chr8.1:10707084-10707103 None:intergenic 35.0%
! ATTTTCCAGACCTCTTCATT+TGG + chr8.1:10707055-10707074 MS.gene036663:CDS 35.0%
! TTCATTTGGAATCCATCAAC+TGG + chr8.1:10707069-10707088 MS.gene036663:CDS 35.0%
!! TTGATGGATTCCAAATGAAG+AGG - chr8.1:10707068-10707087 None:intergenic 35.0%
AAGCAAAGACTCCGTATACA+CGG - chr8.1:10707757-10707776 None:intergenic 40.0%
ACGACACACACTCGTAAAAT+TGG + chr8.1:10706658-10706677 MS.gene036663:CDS 40.0%
AGAGTAGGGTCACTCTTTAA+TGG + chr8.1:10707312-10707331 MS.gene036663:CDS 40.0%
CACTATTCTGTTCACAGAGT+AGG + chr8.1:10707297-10707316 MS.gene036663:CDS 40.0%
CATAAAATTAGGGATCGGGT+TGG - chr8.1:10706956-10706975 None:intergenic 40.0%
TCAAATGCGTTTGTAAGCCT+TGG + chr8.1:10706782-10706801 MS.gene036663:CDS 40.0%
TCAAATTCTGTTGAGGTTGG+CGG + chr8.1:10706741-10706760 MS.gene036663:CDS 40.0%
TCGACACGAACTTGAATTTG+TGG - chr8.1:10707016-10707035 None:intergenic 40.0%
TCTTTCATTAGCCCAATCGT+TGG - chr8.1:10707502-10707521 None:intergenic 40.0%
TGGTCAAAACCATCAGGTAA+AGG - chr8.1:10707426-10707445 None:intergenic 40.0%
TTAGAGATGCCTTTACCTGA+TGG + chr8.1:10707414-10707433 MS.gene036663:CDS 40.0%
! ACAAATTCAAGTTCGTGTCG+AGG + chr8.1:10707015-10707034 MS.gene036663:CDS 40.0%
! CCCATGTGATTTTCATGTAG+TGG + chr8.1:10706981-10707000 MS.gene036663:CDS 40.0%
! TCTAGAGCATGGATCATTCT+GGG + chr8.1:10707701-10707720 MS.gene036663:CDS 40.0%
!! AACTCTACAAGAGTGTTTGG+CGG - chr8.1:10706851-10706870 None:intergenic 40.0%
!! TTCTAGAGCATGGATCATTC+TGG + chr8.1:10707700-10707719 MS.gene036663:CDS 40.0%
ACTTGGGATCCAAATGGAAG+TGG - chr8.1:10707732-10707751 None:intergenic 45.0%
ATCCCAAGTGACCGTGTATA+CGG + chr8.1:10707743-10707762 MS.gene036663:CDS 45.0%
CAGTTTATGGGCCAACGATT+GGG + chr8.1:10707488-10707507 MS.gene036663:CDS 45.0%
GGATTCCAAATGAAGAGGTC+TGG - chr8.1:10707063-10707082 None:intergenic 45.0%
GTTGCATGGTCAAAACCATC+AGG - chr8.1:10707432-10707451 None:intergenic 45.0%
TAACGAGCTATCCGCATTTG+AGG + chr8.1:10707211-10707230 MS.gene036663:CDS 45.0%
TCAGTTTATGGGCCAACGAT+TGG + chr8.1:10707487-10707506 MS.gene036663:CDS 45.0%
TTAGGCTTGCACATTGTCAC+CGG - chr8.1:10707787-10707806 None:intergenic 45.0%
ACGGTCACTTGGGATCCAAA+TGG - chr8.1:10707738-10707757 None:intergenic 50.0%
ACTCCGTATACACGGTCACT+TGG - chr8.1:10707749-10707768 None:intergenic 50.0%
CTCCGTATACACGGTCACTT+GGG - chr8.1:10707748-10707767 None:intergenic 50.0%
GAGTCTTTGCTTTCACTCCC+CGG + chr8.1:10707765-10707784 MS.gene036663:CDS 50.0%
TAGGCTTGCACATTGTCACC+GGG - chr8.1:10707786-10707805 None:intergenic 50.0%
TCAAGAGGCAGATAAGGCTG+TGG - chr8.1:10706712-10706731 None:intergenic 50.0%
! GAGCATGGATCATTCTGGGA+CGG + chr8.1:10707705-10707724 MS.gene036663:CDS 50.0%
!! AGAGGACAGCTTCTAGAGCA+TGG + chr8.1:10707690-10707709 MS.gene036663:CDS 50.0%
AGGCTTGCACATTGTCACCG+GGG - chr8.1:10707785-10707804 None:intergenic 55.0%
TGGGACGGTCCACTTCCATT+TGG + chr8.1:10707720-10707739 MS.gene036663:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 10706646 10707806 10706646 ID=MS.gene036663
chr8.1 mRNA 10706646 10707806 10706646 ID=MS.gene036663.t1;Parent=MS.gene036663
chr8.1 exon 10706646 10707806 10706646 ID=MS.gene036663.t1.exon1;Parent=MS.gene036663.t1
chr8.1 CDS 10706646 10707806 10706646 ID=cds.MS.gene036663.t1;Parent=MS.gene036663.t1
Gene Sequence

>MS.gene036663

ATGGAGGAGGAGACGACACACACTCGTAAAATTGGAAAAAGGCGAATGAAGAAGAAGACGAATCCACAGCCTTATCTGCCTCTTGAATTGATAGTTCAAATTCTGTTGAGGTTGGCGGTGAAGTCTGTTCTTCGTTTCAAATGCGTTTGTAAGCCTTGGTTTTCTCTTATCTCTAATGATGCAAATTCGCATTTTCAAATAACCGCCAAACACTCTTGTAGAGTTTTATTCATGTCAATTCATGTTCCGACTACACTATCTTTAGATTTTGAAGCATTGGATTGTGATAATGTTGTTTCTGAAATACCCAACCCGATCCCTAATTTTATGAAATCCCCATGTGATTTTCATGTAGTGGATTATCTTGCCACAAATTCAAGTTCGTGTCGAGGATTTATATTTCTGCACAATTTTCCAGACCTCTTCATTTGGAATCCATCAACTGGAGTTTACAAACAAATACCTTTGTCTCCTAATCATTCAAATAGTTTCCATAATCTATATGGATTTGGGTATGATCAATTAAGAGATGATTACTTGGTGGTTTCTGTAACATCGCAAAAATTAACGAGCTATCCGCATTTGAGGTTTTTTTCATTGAGAGATAATACTTGGAATGAACTTGAGGCTGCTCACTTCCCCTATGTTCTTCACTATTCTGTTCACAGAGTAGGGTCACTCTTTAATGGAGCTATTCATTGGTTGGTTTTTCATAGTGATATAAAGAGTCTAGTTATAATTGCATTTGATTTAATGGAAAGAAAGCTTTTAGAGATGCCTTTACCTGATGGTTTTGACCATGCAACTAATAATTGTAATTTGTGGGTATTTGGAGAATTTCTCAGTTTATGGGCCAACGATTGGGCTAATGAAAGAGTTGAAATATGGGTGATGAACGAATACAAAGTGCATTCGTCTTGGACTAAAACTCTTGTTCTTCCTGTTGATGACATTTATACTCTTTCCTTTTACCCAATATGCTCTACAAAAAATGGTGACATTCTTGGAACAGACAGTGTTACCCAGTTACTGAAGTATAATGACAGAGGACAGCTTCTAGAGCATGGATCATTCTGGGACGGTCCACTTCCATTTGGATCCCAAGTGACCGTGTATACGGAGTCTTTGCTTTCACTCCCCGGTGACAATGTGCAAGCCTAA

Protein sequence

>MS.gene036663.t1

MEEETTHTRKIGKRRMKKKTNPQPYLPLELIVQILLRLAVKSVLRFKCVCKPWFSLISNDANSHFQITAKHSCRVLFMSIHVPTTLSLDFEALDCDNVVSEIPNPIPNFMKSPCDFHVVDYLATNSSSCRGFIFLHNFPDLFIWNPSTGVYKQIPLSPNHSNSFHNLYGFGYDQLRDDYLVVSVTSQKLTSYPHLRFFSLRDNTWNELEAAHFPYVLHYSVHRVGSLFNGAIHWLVFHSDIKSLVIIAFDLMERKLLEMPLPDGFDHATNNCNLWVFGEFLSLWANDWANERVEIWVMNEYKVHSSWTKTLVLPVDDIYTLSFYPICSTKNGDILGTDSVTQLLKYNDRGQLLEHGSFWDGPLPFGSQVTVYTESLLSLPGDNVQA