AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058693


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058693.t1 MTR_7g079370 59.710 345 122 8 67 401 16 353 4.51e-122 358
MS.gene058693.t1 MTR_2g048580 52.493 381 135 12 31 404 1 342 7.75e-115 339
MS.gene058693.t1 MTR_7g079400 52.994 334 137 8 83 404 12 337 3.08e-100 301
MS.gene058693.t1 MTR_8g102520 47.895 380 134 11 31 404 1 322 3.39e-95 288
MS.gene058693.t1 MTR_3g103020 44.241 382 189 12 31 404 13 378 7.26e-87 269
MS.gene058693.t1 MTR_5g070080 44.051 395 177 14 37 404 9 386 1.20e-82 258
MS.gene058693.t1 MTR_1g055135 42.895 373 199 8 37 404 12 375 4.33e-82 256
MS.gene058693.t1 MTR_5g070088 42.931 389 184 12 37 400 6 381 8.18e-79 248
MS.gene058693.t1 MTR_3g034180 43.077 390 191 14 30 403 114 488 1.09e-78 251
MS.gene058693.t1 MTR_4g023080 42.667 375 179 13 31 397 1 347 1.11e-78 247
MS.gene058693.t1 MTR_6g060650 43.557 388 188 11 31 403 1 372 1.72e-78 247
MS.gene058693.t1 MTR_5g070130 42.932 382 193 12 31 400 4 372 6.54e-78 246
MS.gene058693.t1 MTR_3g034130 43.370 362 180 13 31 377 1 352 8.78e-77 243
MS.gene058693.t1 MTR_4g109280 43.377 385 181 13 31 404 1 359 4.80e-76 240
MS.gene058693.t1 MTR_4g116330 42.119 387 199 12 26 404 11 380 7.02e-75 238
MS.gene058693.t1 MTR_4g109270 43.117 385 187 15 31 404 1 364 1.38e-74 236
MS.gene058693.t1 MTR_5g097210 42.632 380 185 15 31 399 1 358 1.67e-74 237
MS.gene058693.t1 MTR_3g034160 42.199 391 191 14 31 403 1 374 3.46e-74 236
MS.gene058693.t1 MTR_4g117720 41.316 380 167 12 29 400 42 373 1.37e-73 234
MS.gene058693.t1 MTR_4g021785 40.318 377 195 10 33 404 4 355 4.67e-73 232
MS.gene058693.t1 MTR_4g117780 42.746 386 190 17 31 404 1 367 9.01e-73 232
MS.gene058693.t1 MTR_4g122850 41.209 364 195 12 49 404 12 364 1.14e-72 232
MS.gene058693.t1 MTR_4g117850 42.588 371 184 15 37 397 22 373 4.00e-72 231
MS.gene058693.t1 MTR_8g433040 41.689 379 187 13 33 404 13 364 1.32e-71 229
MS.gene058693.t1 MTR_8g032380 41.689 379 187 13 33 404 13 364 1.32e-71 229
MS.gene058693.t1 MTR_7g079420 51.786 280 86 7 134 404 905 1144 1.57e-71 243
MS.gene058693.t1 MTR_4g117770 43.005 386 189 15 31 404 1 367 4.11e-71 228
MS.gene058693.t1 MTR_4g117810 43.005 386 189 15 31 404 1 367 4.11e-71 228
MS.gene058693.t1 MTR_4g023070 40.779 385 179 15 38 397 3 363 1.03e-70 227
MS.gene058693.t1 MTR_8g032390 39.698 398 196 13 9 400 12 371 1.15e-70 227
MS.gene058693.t1 MTR_4g023090 40.204 393 199 13 30 403 8 383 1.51e-70 227
MS.gene058693.t1 MTR_4g117750 42.819 376 187 11 37 403 2 358 2.04e-70 229
MS.gene058693.t1 MTR_4g117750 44.681 94 46 3 311 402 392 481 4.21e-12 68.2
MS.gene058693.t1 MTR_4g118380 41.436 362 183 7 31 371 1 354 6.22e-70 224
MS.gene058693.t1 MTR_4g094365 40.568 387 194 14 31 404 1 364 9.91e-70 224
MS.gene058693.t1 MTR_4g023120 39.642 391 186 16 38 403 3 368 5.65e-68 220
MS.gene058693.t1 MTR_4g023130 38.172 372 159 11 31 397 1 306 3.27e-67 216
MS.gene058693.t1 MTR_4g023440 39.323 384 166 13 30 404 7 332 4.04e-65 211
MS.gene058693.t1 MTR_4g023150 39.683 378 196 12 29 398 1 354 2.05e-61 202
MS.gene058693.t1 MTR_4g023190 39.683 378 195 11 29 398 1 353 3.04e-60 199
MS.gene058693.t1 MTR_4g116330 38.701 385 176 12 26 404 11 341 3.43e-60 199
MS.gene058693.t1 MTR_4g023200 40.476 378 193 11 29 398 1 354 4.59e-60 199
MS.gene058693.t1 MTR_4g023380 38.958 403 184 15 30 403 7 376 1.46e-59 198
MS.gene058693.t1 MTR_8g013010 43.321 277 139 9 30 302 46 308 3.41e-57 190
MS.gene058693.t1 MTR_8g098830 57.831 166 68 1 205 370 31 194 6.27e-57 186
MS.gene058693.t1 MTR_1g055165 35.356 379 165 15 37 404 9 318 3.86e-56 187
MS.gene058693.t1 MTR_8g433030 37.437 398 172 16 9 400 12 338 3.42e-55 186
MS.gene058693.t1 MTR_4g121580 40.057 352 163 15 31 368 1 318 7.70e-53 181
MS.gene058693.t1 MTR_5g069120 55.307 179 71 4 48 218 1 178 1.80e-51 171
MS.gene058693.t1 MTR_1g055195 37.634 279 149 6 130 404 221 478 3.79e-47 168
MS.gene058693.t1 MTR_4g117870 38.535 314 133 15 98 404 7 267 1.88e-44 155
MS.gene058693.t1 MTR_4g118400 35.216 301 148 9 103 398 36 294 1.56e-42 151
MS.gene058693.t1 MTR_4g116340 38.247 251 114 9 30 267 25 247 8.52e-41 145
MS.gene058693.t1 MTR_7g079450 59.589 146 46 6 262 404 2 137 1.17e-39 138
MS.gene058693.t1 MTR_6g463430 43.939 198 98 7 209 404 16 202 2.70e-39 139
MS.gene058693.t1 MTR_1g055175 40.594 202 109 6 207 404 7 201 6.21e-39 139
MS.gene058693.t1 MTR_4g116320 43.119 218 111 8 185 399 46 253 1.01e-37 137
MS.gene058693.t1 MTR_4g118370 39.526 253 123 8 147 399 33 255 6.27e-37 135
MS.gene058693.t1 MTR_4g107820 31.861 317 178 13 38 341 36 327 6.29e-33 127
MS.gene058693.t1 MTR_4g107780 31.861 317 178 13 38 341 36 327 6.29e-33 127
MS.gene058693.t1 MTR_4g107820 31.861 317 178 13 38 341 36 327 7.74e-33 128
MS.gene058693.t1 MTR_4g107780 31.861 317 178 13 38 341 36 327 7.97e-33 128
MS.gene058693.t1 MTR_4g108820 30.743 296 156 8 37 331 41 288 7.19e-32 123
MS.gene058693.t1 MTR_1g055250 38.073 218 121 9 163 375 34 242 8.64e-30 117
MS.gene058693.t1 MTR_1g097330 29.841 315 179 11 32 331 10 297 3.49e-29 117
MS.gene058693.t1 MTR_5g022420 29.605 304 182 12 32 329 21 298 1.04e-28 115
MS.gene058693.t1 MTR_7g117720 38.967 213 94 10 29 232 1 186 5.77e-28 111
MS.gene058693.t1 MTR_7g117720 54.023 87 38 1 315 399 186 272 1.17e-19 88.6
MS.gene058693.t1 MTR_4g117530 35.470 234 97 9 174 404 71 253 1.50e-27 110
MS.gene058693.t1 MTR_3g007360 32.026 306 173 12 41 332 55 339 3.06e-27 112
MS.gene058693.t1 MTR_8g040935 38.073 218 110 11 201 404 2 208 5.12e-27 107
MS.gene058693.t1 MTR_3g007410 31.699 306 174 12 41 332 55 339 1.37e-26 110
MS.gene058693.t1 MTR_8g467140 30.547 311 186 13 37 336 31 322 1.43e-26 108
MS.gene058693.t1 MTR_2g055970 31.132 318 175 14 37 336 210 501 1.73e-26 111
MS.gene058693.t1 MTR_4g117430 40.000 170 79 7 135 302 3 151 1.02e-25 102
MS.gene058693.t1 MTR_5g022045 25.857 321 198 10 38 328 35 345 1.20e-25 108
MS.gene058693.t1 MTR_2g021150 28.529 340 194 18 37 351 13 328 1.77e-25 106
MS.gene058693.t1 MTR_5g027330 26.724 348 215 12 42 365 44 375 2.85e-25 107
MS.gene058693.t1 MTR_0064s0160 26.847 406 245 13 34 404 38 426 3.16e-25 107
MS.gene058693.t1 MTR_0115s0020 26.456 412 251 15 29 401 1 399 3.67e-25 106
MS.gene058693.t1 MTR_5g027370 26.513 347 215 12 42 364 33 363 4.10e-25 106
MS.gene058693.t1 MTR_1g097560 28.254 315 177 15 38 337 36 316 5.93e-25 105
MS.gene058693.t1 MTR_5g022040 25.135 370 175 15 38 328 40 386 2.22e-24 105
MS.gene058693.t1 MTR_1g094210 25.815 368 220 14 38 385 57 391 3.59e-24 103
MS.gene058693.t1 MTR_7g013590 29.412 306 173 13 41 327 39 320 3.78e-24 103
MS.gene058693.t1 MTR_1g097490 26.456 412 246 16 6 396 15 390 5.98e-24 102
MS.gene058693.t1 MTR_4g133170 25.656 343 193 15 38 351 4 313 6.11e-24 102
MS.gene058693.t1 MTR_5g057710 27.667 300 188 9 38 327 46 326 8.06e-24 102
MS.gene058693.t1 MTR_3g006670 31.290 310 167 15 38 327 49 332 9.59e-24 102
MS.gene058693.t1 MTR_5g057020 27.551 294 179 11 38 326 46 310 1.06e-23 101
MS.gene058693.t1 MTR_1g094210 25.858 379 224 14 38 396 57 398 1.47e-23 101
MS.gene058693.t1 MTR_6g021880 25.507 345 218 10 49 371 31 358 2.72e-23 100
MS.gene058693.t1 MTR_5g057690 26.780 295 187 10 38 327 46 316 3.73e-23 100
MS.gene058693.t1 MTR_5g057790 27.961 304 182 11 38 327 46 326 4.48e-23 100
MS.gene058693.t1 MTR_6g065980 29.831 295 174 14 38 327 16 282 5.69e-23 99.8
MS.gene058693.t1 MTR_8g101580 27.139 339 209 13 7 330 14 329 5.87e-23 100
MS.gene058693.t1 MTR_4g114700 32.707 266 118 8 135 395 9 218 5.92e-23 97.1
MS.gene058693.t1 MTR_2g046920 28.205 312 190 12 37 336 23 312 5.99e-23 99.8
MS.gene058693.t1 MTR_7g070830 25.731 342 205 10 38 337 21 355 1.21e-22 99.4
MS.gene058693.t1 MTR_3g009310 30.392 306 182 13 38 332 42 327 1.32e-22 99.0
MS.gene058693.t1 MTR_4g061340 27.331 311 190 11 38 332 26 316 1.41e-22 98.6
MS.gene058693.t1 MTR_1g050542 26.688 311 188 11 38 336 58 340 1.48e-22 99.0
MS.gene058693.t1 MTR_5g022090 27.707 314 160 13 38 328 34 303 3.56e-22 97.8
MS.gene058693.t1 MTR_4g118360 47.619 105 53 2 294 398 18 120 4.05e-22 91.3
MS.gene058693.t1 MTR_1g054575 28.065 310 187 12 38 336 52 336 4.58e-22 99.0
MS.gene058693.t1 MTR_3g007330 28.525 305 184 13 38 332 48 328 7.64e-22 96.7
MS.gene058693.t1 MTR_1g061330 24.936 393 240 15 36 404 2 363 8.01e-22 96.7
MS.gene058693.t1 MTR_3g036290 28.135 327 192 16 38 354 22 315 1.14e-21 95.9
MS.gene058693.t1 MTR_5g021880 25.275 364 193 12 30 327 28 378 1.76e-21 96.3
MS.gene058693.t1 MTR_5g021880 25.275 364 193 12 30 327 28 378 1.88e-21 96.7
MS.gene058693.t1 MTR_5g021880 25.275 364 193 12 30 327 28 378 2.44e-21 96.3
MS.gene058693.t1 MTR_5g023000 51.515 99 40 4 309 404 6 99 3.27e-21 88.2
MS.gene058693.t1 MTR_7g066100 24.433 397 254 11 37 398 10 395 3.38e-21 94.7
MS.gene058693.t1 MTR_7g070440 26.197 355 210 16 37 360 6 339 3.88e-21 94.4
MS.gene058693.t1 MTR_7g066000 27.747 364 214 15 37 374 24 364 4.30e-21 94.7
MS.gene058693.t1 MTR_7g070880 25.364 343 207 10 38 338 21 356 5.78e-21 94.4
MS.gene058693.t1 MTR_3g006570 25.329 304 190 12 38 327 21 301 7.11e-21 94.0
MS.gene058693.t1 MTR_4g023430 46.218 119 54 3 29 139 32 148 1.09e-20 90.1
MS.gene058693.t1 MTR_4g055060 28.481 316 184 17 38 333 30 323 1.31e-20 93.2
MS.gene058693.t1 MTR_2g021155 29.492 295 184 13 41 327 39 317 2.42e-20 94.0
MS.gene058693.t1 MTR_4g109290 35.583 163 60 5 37 191 8 133 2.92e-20 88.2
MS.gene058693.t1 MTR_3g014540 28.618 304 182 12 38 327 29 311 2.96e-20 92.0
MS.gene058693.t1 MTR_3g014570 27.358 318 184 13 38 334 29 320 3.72e-20 91.7
MS.gene058693.t1 MTR_3g010590 23.445 418 251 16 4 396 12 385 4.49e-20 91.7
MS.gene058693.t1 MTR_4g027370 24.444 360 197 13 30 327 19 365 7.15e-20 92.0
MS.gene058693.t1 MTR_4g102410 25.065 383 232 16 32 372 55 424 1.03e-19 90.9
MS.gene058693.t1 MTR_5g011200 25.949 316 181 15 38 329 17 303 1.35e-19 90.1
MS.gene058693.t1 MTR_3g013740 27.554 323 179 13 38 330 44 341 1.45e-19 90.1
MS.gene058693.t1 MTR_5g048160 26.214 412 235 17 36 400 2 391 1.52e-19 90.1
MS.gene058693.t1 MTR_1g056710 25.845 414 253 18 10 397 4 389 1.57e-19 90.1
MS.gene058693.t1 MTR_2g021190 28.667 300 188 14 38 327 21 304 1.90e-19 89.7
MS.gene058693.t1 MTR_2g104340 26.126 333 204 10 32 330 7 331 3.75e-19 89.0
MS.gene058693.t1 MTR_1g055070 26.792 265 164 10 38 281 49 304 4.28e-19 88.6
MS.gene058693.t1 MTR_3g030250 24.654 361 202 17 38 382 37 343 6.22e-19 88.2
MS.gene058693.t1 MTR_2g461450 25.846 325 203 12 38 355 18 311 8.07e-19 87.4
MS.gene058693.t1 MTR_3g009240 26.687 326 180 11 25 327 23 312 8.51e-19 87.8
MS.gene058693.t1 MTR_2g046900 26.166 386 231 15 37 396 27 384 8.65e-19 87.8
MS.gene058693.t1 MTR_2g047832 28.696 345 193 18 16 330 10 331 9.18e-19 87.8
MS.gene058693.t1 MTR_3g013770 28.617 311 177 14 38 327 33 319 9.88e-19 87.8
MS.gene058693.t1 MTR_4g030110 27.463 335 164 13 38 335 30 322 1.02e-18 87.4
MS.gene058693.t1 MTR_3g023930 24.808 391 217 18 14 390 10 337 1.16e-18 87.0
MS.gene058693.t1 MTR_3g036430 25.589 297 167 10 38 327 20 269 1.39e-18 86.7
MS.gene058693.t1 MTR_4g013180 24.561 342 206 12 37 344 10 333 1.49e-18 87.8
MS.gene058693.t1 MTR_0128s0020 25.526 380 208 16 38 373 18 366 1.63e-18 87.0
MS.gene058693.t1 MTR_7g055870 25.057 435 243 18 30 396 5 424 1.64e-18 87.4
MS.gene058693.t1 MTR_2g021050 28.198 344 179 18 38 351 5 310 1.73e-18 86.7
MS.gene058693.t1 MTR_2g029990 27.946 297 192 10 39 327 52 334 1.76e-18 87.0
MS.gene058693.t1 MTR_7g056760 23.940 401 246 17 37 396 22 404 1.78e-18 87.0
MS.gene058693.t1 MTR_1g088120 25.258 388 211 13 37 377 9 364 2.33e-18 86.7
MS.gene058693.t1 MTR_7g060940 26.239 343 182 12 38 342 22 331 2.41e-18 86.7
MS.gene058693.t1 MTR_3g007430 27.778 306 175 11 41 327 46 324 3.26e-18 85.9
MS.gene058693.t1 MTR_7g407070 28.000 325 176 15 38 327 32 333 3.36e-18 86.3
MS.gene058693.t1 MTR_3g007270 24.920 313 202 10 38 332 47 344 3.41e-18 86.3
MS.gene058693.t1 MTR_1g115160 25.817 306 183 14 37 329 21 295 4.68e-18 85.5
MS.gene058693.t1 MTR_7g055930 23.776 429 256 14 30 396 5 424 5.37e-18 85.9
MS.gene058693.t1 MTR_5g022900 24.796 367 171 12 38 328 32 369 7.24e-18 85.5
MS.gene058693.t1 MTR_3g464500 25.773 388 218 14 1 349 1 357 7.62e-18 85.1
MS.gene058693.t1 MTR_3g011100 25.705 319 186 15 38 332 235 526 9.37e-18 85.5
MS.gene058693.t1 MTR_1g112930 25.193 389 223 16 38 396 25 375 9.91e-18 84.3
MS.gene058693.t1 MTR_4g019990 26.301 346 190 14 37 342 5 325 1.14e-17 84.3
MS.gene058693.t1 MTR_5g046300 25.083 303 187 12 38 327 4 279 1.50e-17 83.6
MS.gene058693.t1 MTR_5g046290 25.083 303 187 12 38 327 4 279 1.50e-17 83.6
MS.gene058693.t1 MTR_7g062100 24.757 412 218 15 38 396 24 396 1.66e-17 84.0
MS.gene058693.t1 MTR_2g426020 25.245 408 239 18 35 403 3 383 2.80e-17 83.6
MS.gene058693.t1 MTR_6g017280 24.646 353 210 14 38 351 9 344 2.97e-17 83.2
MS.gene058693.t1 MTR_5g069930 28.794 257 143 11 35 269 3 241 2.98e-17 83.2
MS.gene058693.t1 MTR_7g056503 24.869 382 218 17 36 372 19 376 3.14e-17 83.2
MS.gene058693.t1 MTR_3g030240 24.855 346 187 17 9 338 25 313 4.01e-17 82.8
MS.gene058693.t1 MTR_3g010870 24.516 310 179 12 38 327 37 311 7.30e-17 82.0
MS.gene058693.t1 MTR_3g010970 25.532 329 190 12 16 327 26 316 7.94e-17 82.0
MS.gene058693.t1 MTR_2g028160 23.647 351 225 14 38 355 5 345 9.15e-17 82.0
MS.gene058693.t1 MTR_7g445750 25.857 321 190 11 37 321 22 330 9.44e-17 81.3
MS.gene058693.t1 MTR_3g083640 25.166 302 188 10 38 327 55 330 1.04e-16 81.6
MS.gene058693.t1 MTR_2g046830 27.097 310 184 13 37 330 24 307 1.10e-16 81.6
MS.gene058693.t1 MTR_3g024150 26.230 305 177 16 41 327 38 312 1.16e-16 81.3
MS.gene058693.t1 MTR_3g010520 24.523 367 201 17 38 390 25 329 1.17e-16 81.3
MS.gene058693.t1 MTR_7g056390 26.513 347 181 11 38 337 18 337 1.27e-16 81.6
MS.gene058693.t1 MTR_1g068875 24.545 330 214 12 38 351 4 314 1.49e-16 80.9
MS.gene058693.t1 MTR_6g004660 27.129 317 182 14 38 327 16 310 1.71e-16 80.9
MS.gene058693.t1 MTR_7g056003 27.003 337 186 13 38 337 15 328 1.99e-16 80.9
MS.gene058693.t1 MTR_2g028140 25.648 347 187 17 38 337 5 327 2.15e-16 80.9
MS.gene058693.t1 MTR_7g052670 25.806 372 209 12 37 351 20 381 2.56e-16 80.9
MS.gene058693.t1 MTR_3g464470 26.462 325 194 12 37 336 6 310 2.75e-16 80.1
MS.gene058693.t1 MTR_2g437110 25.424 413 232 19 24 396 16 392 2.85e-16 80.9
MS.gene058693.t1 MTR_4g013185 25.356 351 196 14 37 337 9 343 3.01e-16 80.5
MS.gene058693.t1 MTR_7g060960 27.171 357 195 15 38 372 32 345 3.30e-16 79.7
MS.gene058693.t1 MTR_4g031770 26.198 313 181 16 38 329 4 287 3.69e-16 79.7
MS.gene058693.t1 MTR_6g013270 27.184 309 187 13 38 329 29 316 3.97e-16 79.7
MS.gene058693.t1 MTR_0667s0010 24.432 352 217 16 36 357 4 336 6.52e-16 79.3
MS.gene058693.t1 MTR_0128s0070 24.934 381 208 16 38 373 22 369 6.68e-16 79.3
MS.gene058693.t1 MTR_0097s0030 24.112 394 244 13 38 396 14 387 6.88e-16 79.0
MS.gene058693.t1 MTR_2g047240 24.112 394 244 13 38 396 14 387 6.88e-16 79.0
MS.gene058693.t1 MTR_3g030330 25.083 303 184 10 38 327 20 292 6.95e-16 79.0
MS.gene058693.t1 MTR_2g024110 25.316 316 188 13 38 331 4 293 7.98e-16 79.0
MS.gene058693.t1 MTR_3g010430 23.810 315 183 12 38 327 36 318 9.26e-16 79.0
MS.gene058693.t1 MTR_3g030350 26.384 307 180 13 38 327 35 312 1.03e-15 78.6
MS.gene058693.t1 MTR_3g010390 26.625 323 190 16 38 332 33 336 1.05e-15 78.6
MS.gene058693.t1 MTR_7g056200 25.610 328 179 10 37 336 22 312 1.35e-15 78.2
MS.gene058693.t1 MTR_3g009260 26.912 353 215 15 6 345 7 329 1.46e-15 78.2
MS.gene058693.t1 MTR_5g069760 25.429 350 213 15 37 358 5 334 1.47e-15 77.8
MS.gene058693.t1 MTR_0464s0020 25.000 364 211 16 21 337 1 349 1.56e-15 78.2
MS.gene058693.t1 MTR_7g077970 25.723 346 175 15 38 329 7 324 1.69e-15 78.2
MS.gene058693.t1 MTR_5g007610 25.574 305 209 9 38 332 41 337 2.20e-15 77.8
MS.gene058693.t1 MTR_0649s0020 25.526 380 214 18 38 372 11 366 2.36e-15 77.4
MS.gene058693.t1 MTR_2g078900 25.407 307 182 12 38 327 33 309 2.69e-15 77.0
MS.gene058693.t1 MTR_1g054725 25.076 327 202 14 16 327 8 306 2.87e-15 77.0
MS.gene058693.t1 MTR_3g036335 25.243 309 185 14 38 327 41 322 2.96e-15 77.4
MS.gene058693.t1 MTR_2g043410 24.620 329 195 8 38 332 22 331 3.43e-15 77.0
MS.gene058693.t1 MTR_2g031720 23.120 359 224 12 38 368 6 340 3.70e-15 77.0
MS.gene058693.t1 MTR_3g083010 24.038 416 245 17 38 403 6 400 3.78e-15 77.0
MS.gene058693.t1 MTR_3g030310 24.841 314 184 13 38 327 21 306 3.99e-15 77.0
MS.gene058693.t1 MTR_5g096710 24.405 336 188 11 38 336 23 329 4.18e-15 77.0
MS.gene058693.t1 MTR_4g080200 25.850 294 182 12 38 317 3 274 4.41e-15 76.3
MS.gene058693.t1 MTR_1g071010 25.758 330 195 14 38 337 15 324 4.50e-15 76.6
MS.gene058693.t1 MTR_5g008530 68.889 45 14 0 38 82 18 62 4.87e-15 70.1
MS.gene058693.t1 MTR_7g061050 25.806 341 178 14 37 337 12 317 4.94e-15 76.6
MS.gene058693.t1 MTR_3g010920 22.751 378 233 13 38 396 44 381 6.16e-15 76.3
MS.gene058693.t1 MTR_3g006500 23.099 342 194 12 32 342 11 314 6.28e-15 76.3
MS.gene058693.t1 MTR_2g425980 25.143 350 208 15 38 351 5 336 6.30e-15 76.3
MS.gene058693.t1 MTR_8g046310 24.685 397 228 18 37 398 15 375 6.54e-15 76.3
MS.gene058693.t1 MTR_7g078040 24.444 360 187 16 38 337 9 343 6.74e-15 76.3
MS.gene058693.t1 MTR_4g024890 24.691 324 210 11 37 340 9 318 7.23e-15 75.9
MS.gene058693.t1 MTR_3g024110 25.083 303 184 11 38 327 101 373 7.66e-15 76.3
MS.gene058693.t1 MTR_3g007300 26.426 333 190 14 38 366 49 330 7.76e-15 75.9
MS.gene058693.t1 MTR_7g055977 25.135 370 176 15 37 360 6 320 8.11e-15 75.9
MS.gene058693.t1 MTR_3g437520 25.852 352 187 15 38 337 23 352 8.12e-15 76.3
MS.gene058693.t1 MTR_3g006530 25.484 310 186 12 38 327 40 324 8.49e-15 75.9
MS.gene058693.t1 MTR_1g442850 26.879 346 170 16 37 337 4 311 9.04e-15 75.5
MS.gene058693.t1 MTR_7g066030 23.729 413 252 14 28 397 11 403 1.02e-14 75.9
MS.gene058693.t1 MTR_5g043160 26.000 350 197 14 40 339 52 389 1.13e-14 75.9
MS.gene058693.t1 MTR_3g436150 28.481 316 180 16 38 327 32 327 1.16e-14 75.5
MS.gene058693.t1 MTR_8g073550 29.000 200 118 8 37 224 29 216 1.18e-14 73.6
MS.gene058693.t1 MTR_5g046260 24.315 292 173 12 38 327 4 249 1.39e-14 74.3
MS.gene058693.t1 MTR_2g021252 25.085 295 185 12 41 327 50 316 1.46e-14 75.1
MS.gene058693.t1 MTR_7g066850 24.233 326 201 12 38 337 23 328 1.52e-14 75.5
MS.gene058693.t1 MTR_0627s0010 24.933 373 203 16 10 327 6 356 1.55e-14 75.1
MS.gene058693.t1 MTR_4g030830 23.907 389 216 20 38 372 9 371 2.05e-14 74.7
MS.gene058693.t1 MTR_6g055210 26.625 323 190 13 37 326 21 329 2.11e-14 75.1
MS.gene058693.t1 MTR_5g023570 33.884 121 77 1 20 140 19 136 2.52e-14 70.5
MS.gene058693.t1 MTR_4g129190 24.490 343 186 13 38 337 6 318 2.53e-14 74.3
MS.gene058693.t1 MTR_1g068835 24.516 310 200 12 38 333 4 293 2.53e-14 74.3
MS.gene058693.t1 MTR_7g066010 26.000 300 179 11 21 287 1 290 3.04e-14 73.9
MS.gene058693.t1 MTR_3g010620 26.100 341 175 17 12 327 13 301 3.09e-14 74.3
MS.gene058693.t1 MTR_0044s0300 25.143 350 185 16 8 327 13 315 3.47e-14 73.9
MS.gene058693.t1 MTR_4g070550 24.633 341 196 16 38 339 5 323 3.62e-14 73.9
MS.gene058693.t1 MTR_7g009265 27.273 253 136 12 124 346 25 259 4.08e-14 73.2
MS.gene058693.t1 MTR_0242s0060 25.373 335 188 14 37 329 8 322 4.27e-14 73.9
MS.gene058693.t1 MTR_0242s0040 25.373 335 188 14 37 329 8 322 4.27e-14 73.9
MS.gene058693.t1 MTR_7g056797 23.148 324 216 9 37 336 22 336 4.32e-14 73.9
MS.gene058693.t1 MTR_7g050520 25.776 322 178 13 37 327 21 312 6.18e-14 73.2
MS.gene058693.t1 MTR_7g091640 24.633 341 191 12 37 337 34 348 8.63e-14 72.8
MS.gene058693.t1 MTR_7g067680 28.165 316 148 18 38 327 49 311 9.35e-14 72.8
MS.gene058693.t1 MTR_6g007135 23.958 384 247 15 38 396 26 389 1.06e-13 72.4
MS.gene058693.t1 MTR_7g062060 25.445 393 216 18 37 372 11 383 1.08e-13 72.4
MS.gene058693.t1 MTR_4g030090 27.187 320 185 16 38 327 14 315 1.16e-13 72.4
MS.gene058693.t1 MTR_0760s0010 23.592 373 231 12 43 396 52 389 1.17e-13 72.4
MS.gene058693.t1 MTR_7g055987 25.680 331 178 12 40 339 22 315 1.24e-13 72.0
MS.gene058693.t1 MTR_2g031680 23.779 307 197 11 36 327 4 288 1.39e-13 72.0
MS.gene058693.t1 MTR_3g023940 23.529 391 226 16 38 396 34 383 1.46e-13 72.0
MS.gene058693.t1 MTR_7g050480 25.633 316 186 12 37 327 21 312 1.59e-13 72.0
MS.gene058693.t1 MTR_1g115185 25.081 307 196 10 37 329 38 324 1.62e-13 72.0
MS.gene058693.t1 MTR_7g028660 25.000 336 203 14 37 344 10 324 2.35e-13 71.2
MS.gene058693.t1 MTR_4g030760 24.667 300 193 11 38 327 73 349 2.68e-13 71.6
MS.gene058693.t1 MTR_7g056260 24.471 331 186 11 38 332 14 316 3.04e-13 70.5
MS.gene058693.t1 MTR_2g028110 22.741 343 207 13 38 351 4 317 3.68e-13 70.9
MS.gene058693.t1 MTR_6g046320 22.899 345 200 13 38 327 39 372 3.71e-13 71.2
MS.gene058693.t1 MTR_7g007300 26.837 313 169 17 38 329 103 376 3.90e-13 70.9
MS.gene058693.t1 MTR_4g013175 23.967 363 201 17 37 343 9 352 4.06e-13 70.9
MS.gene058693.t1 MTR_7g066080 24.773 331 208 10 36 337 14 332 4.15e-13 70.9
MS.gene058693.t1 MTR_0128s0010 23.780 328 201 10 38 336 21 328 4.63e-13 70.5
MS.gene058693.t1 MTR_4g037465 25.846 325 188 14 38 332 21 322 4.63e-13 70.5
MS.gene058693.t1 MTR_6g053260 26.266 316 175 13 38 327 337 620 4.98e-13 71.2
MS.gene058693.t1 MTR_2g047200 24.033 362 192 16 23 336 4 330 5.36e-13 70.5
MS.gene058693.t1 MTR_7g056170 27.350 351 196 18 25 336 62 392 5.67e-13 70.5
MS.gene058693.t1 MTR_6g053240 27.273 308 187 12 38 327 28 316 5.77e-13 70.5
MS.gene058693.t1 MTR_6g090180 24.165 389 236 17 32 375 41 415 6.39e-13 70.5
MS.gene058693.t1 MTR_7g061010 28.882 322 171 13 38 329 22 315 6.73e-13 70.1
MS.gene058693.t1 MTR_6g034720 42.708 96 50 2 176 271 72 162 7.11e-13 67.8
MS.gene058693.t1 MTR_2g043400 25.826 333 186 11 38 332 23 332 1.24e-12 69.3
MS.gene058693.t1 MTR_0267s0050 24.533 375 218 18 41 371 9 362 1.44e-12 68.9
MS.gene058693.t1 MTR_1g029650 23.582 335 197 13 38 337 8 318 1.51e-12 68.9
MS.gene058693.t1 MTR_7g052150 25.309 324 182 11 38 329 22 317 1.73e-12 68.9
MS.gene058693.t1 MTR_7g091630 22.590 332 213 9 37 337 31 349 2.05e-12 68.9
MS.gene058693.t1 MTR_5g056020 25.344 363 202 16 38 348 17 362 2.20e-12 68.9
MS.gene058693.t1 MTR_4g122860 47.000 100 37 4 31 123 60 150 2.22e-12 68.2
MS.gene058693.t1 MTR_7g022600 25.143 350 192 15 38 337 23 352 2.78e-12 68.2
MS.gene058693.t1 MTR_7g016930 24.316 329 190 14 32 331 10 308 2.78e-12 67.8
MS.gene058693.t1 MTR_4g014370 21.981 414 262 16 32 397 5 405 2.86e-12 68.2
MS.gene058693.t1 MTR_2g033410 25.085 295 186 12 38 319 9 281 3.06e-12 67.8
MS.gene058693.t1 MTR_7g078900 24.716 352 193 15 36 337 10 339 3.62e-12 68.2
MS.gene058693.t1 MTR_1g055055 27.953 254 141 11 38 281 26 247 3.97e-12 67.4
MS.gene058693.t1 MTR_7g022670 24.272 309 179 8 36 337 21 281 4.39e-12 67.4
MS.gene058693.t1 MTR_4g033495 26.100 341 182 19 38 337 27 338 4.60e-12 67.8
MS.gene058693.t1 MTR_7g077990 23.768 345 179 13 38 337 17 322 5.75e-12 67.4
MS.gene058693.t1 MTR_8g101940 24.834 302 190 12 38 321 2 284 6.41e-12 67.0
MS.gene058693.t1 MTR_7g017040 24.020 408 243 17 33 397 11 394 7.08e-12 67.0
MS.gene058693.t1 MTR_1g015730 25.000 344 173 17 37 336 8 310 7.59e-12 67.0
MS.gene058693.t1 MTR_6g016285 23.585 318 215 6 38 331 21 334 7.98e-12 67.0
MS.gene058693.t1 MTR_3g013950 24.866 374 220 17 41 371 9 364 9.58e-12 66.6
MS.gene058693.t1 MTR_3g024040 25.667 300 179 13 45 332 38 305 1.00e-11 66.2
MS.gene058693.t1 MTR_2g426070 21.574 343 227 12 39 351 7 337 1.03e-11 66.6
MS.gene058693.t1 MTR_2g021210 25.316 316 191 12 26 327 72 356 1.71e-11 65.9
MS.gene058693.t1 MTR_7g056710 24.926 337 183 11 36 337 16 317 2.06e-11 65.5
MS.gene058693.t1 MTR_2g066170 22.969 357 214 16 32 350 6 339 2.39e-11 65.5
MS.gene058693.t1 MTR_8g039500 24.384 365 209 16 32 360 6 339 2.62e-11 65.1
MS.gene058693.t1 MTR_2g031640 21.614 347 230 12 36 361 4 329 2.84e-11 65.1
MS.gene058693.t1 MTR_5g068040 24.699 332 180 12 38 337 16 309 3.15e-11 64.7
MS.gene058693.t1 MTR_4g006270 24.000 325 194 13 38 345 4 292 3.22e-11 65.1
MS.gene058693.t1 MTR_7g056737 26.608 342 170 14 37 337 21 322 3.32e-11 65.1
MS.gene058693.t1 MTR_3g011650 29.545 220 130 8 41 254 82 282 3.98e-11 63.9
MS.gene058693.t1 MTR_3g058480 24.521 261 164 8 38 281 39 283 4.13e-11 64.3
MS.gene058693.t1 MTR_7g077070 23.894 339 202 13 38 332 16 342 4.19e-11 64.7
MS.gene058693.t1 MTR_8g062660 22.807 399 228 16 38 396 22 380 4.80e-11 65.1
MS.gene058693.t1 MTR_7g035295 25.000 344 169 18 38 341 16 310 5.32e-11 64.3
MS.gene058693.t1 MTR_0831s0010 24.225 355 203 17 36 351 48 375 6.17e-11 64.3
MS.gene058693.t1 MTR_5g074870 58.140 43 18 0 38 80 82 124 6.29e-11 60.8
MS.gene058693.t1 MTR_5g057040 29.630 162 103 3 38 191 46 204 7.46e-11 64.7
MS.gene058693.t1 MTR_3g058470 28.837 215 118 9 38 229 37 239 8.07e-11 63.5
MS.gene058693.t1 MTR_3g463170 58.140 43 18 0 38 80 92 134 8.22e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058693.t1 AT4G12560 27.795 331 190 14 38 340 4 313 3.76e-24 103
MS.gene058693.t1 AT4G12560 27.795 331 190 14 38 340 4 313 3.76e-24 103
MS.gene058693.t1 AT4G12560 27.795 331 190 14 38 340 4 313 3.76e-24 103
MS.gene058693.t1 AT3G06240 26.979 341 182 15 38 330 36 357 3.16e-23 101
MS.gene058693.t1 AT4G22390 26.403 303 197 12 39 327 5 295 4.01e-18 85.9
MS.gene058693.t1 AT4G22390 26.403 303 197 12 39 327 5 295 5.38e-18 85.5
MS.gene058693.t1 AT3G22700 26.295 251 162 9 38 280 5 240 1.45e-17 83.6
MS.gene058693.t1 AT3G23880 26.948 308 187 12 38 329 14 299 1.75e-17 83.6
MS.gene058693.t1 AT5G49610 27.660 329 198 14 33 347 4 306 7.69e-15 75.9
MS.gene058693.t1 AT1G33530 24.422 303 185 11 38 328 97 367 7.47e-14 73.2
MS.gene058693.t1 AT3G21120 25.188 266 152 13 37 280 2 242 8.58e-14 72.8
MS.gene058693.t1 AT3G16210 27.300 337 183 20 36 351 3 298 1.71e-13 71.6
MS.gene058693.t1 AT5G07610 28.626 262 142 12 40 281 35 271 5.12e-13 70.5
MS.gene058693.t1 AT4G19940 24.642 349 218 14 38 359 35 365 1.14e-11 66.6
MS.gene058693.t1 AT3G22720 22.424 330 223 15 38 351 5 317 1.18e-11 66.2
MS.gene058693.t1 AT3G49980 25.573 262 167 13 38 287 6 251 2.19e-11 65.5
MS.gene058693.t1 AT3G49980 25.573 262 167 13 38 287 5 250 2.52e-11 65.1
MS.gene058693.t1 AT3G07870 22.571 319 200 13 36 327 26 324 2.97e-11 65.1
MS.gene058693.t1 AT5G62660 23.810 252 172 7 38 280 41 281 3.26e-11 64.7
MS.gene058693.t1 AT3G17540 24.272 309 191 14 38 327 10 294 7.73e-11 63.9
MS.gene058693.t1 AT1G53550 21.296 324 231 10 38 352 35 343 8.33e-11 63.9
MS.gene058693.t1 AT3G22421 24.299 321 219 12 29 334 1 312 8.58e-11 63.9

Find 91 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCTTTGATTTAA+AGG 0.116438 7.4:+26523979 MS.gene058693:CDS
CGTTCTCATCCTGAAATTAT+AGG 0.189974 7.4:+26523563 MS.gene058693:CDS
CCACAATTTGTAAAGGATAT+TGG 0.201297 7.4:-26524211 None:intergenic
CACAATTTGTAAAGGATATT+GGG 0.212064 7.4:-26524210 None:intergenic
CTGAGGATTACTTGGTAGTT+TGG 0.237966 7.4:+26523744 MS.gene058693:CDS
TGGTTCTCATTTGCCTTATA+TGG 0.248940 7.4:+26523862 MS.gene058693:CDS
TATGAACATAAGTCTTTGTT+TGG 0.269370 7.4:-26523444 None:intergenic
CCTTTGCCGGCAATAGTTAT+AGG 0.270304 7.4:-26523677 None:intergenic
TGAGGATTACTTGGTAGTTT+GGG 0.277638 7.4:+26523745 MS.gene058693:CDS
GAAAATGTGAAGTTGCAAAA+TGG 0.311063 7.4:-26523406 None:intergenic
TCTTGAATGGTTCTATTCAT+TGG 0.326345 7.4:+26523924 MS.gene058693:CDS
CTTGAGAATATAACCTTTGC+CGG 0.326841 7.4:-26523690 None:intergenic
AAATCAATGGATAGGGCTTC+AGG 0.333870 7.4:-26523479 None:intergenic
TTTCTATTAGTAACCATATA+AGG 0.347839 7.4:-26523875 None:intergenic
AAGTCATCAGCCGTTGAGTT+TGG 0.363246 7.4:-26523235 None:intergenic
TTCTCGAGATTATGATTTGT+TGG 0.363932 7.4:+26524054 MS.gene058693:CDS
ATTTCAATAATCACTTCTTC+AGG 0.369430 7.4:-26523305 None:intergenic
AAAATGTGAAGTTGCAAAAT+GGG 0.375096 7.4:-26523405 None:intergenic
CTACACGAACCTATAATTTC+AGG 0.379354 7.4:-26523572 None:intergenic
GAATGGTTCTATTCATTGGC+TGG 0.382596 7.4:+26523928 MS.gene058693:CDS
CCGTCTCCTATAACTATTGC+CGG 0.390118 7.4:+26523671 MS.gene058693:CDS
ACAAATTGTGGTGATATAGT+TGG 0.398543 7.4:+26524223 MS.gene058693:CDS
CCAATATCCTTTACAAATTG+TGG 0.408775 7.4:+26524211 MS.gene058693:CDS
ATGAACATAAGTCTTTGTTT+GGG 0.414301 7.4:-26523443 None:intergenic
TGTGAACTTCGATGAAGTTA+AGG 0.436159 7.4:+26524105 MS.gene058693:CDS
GAGCGATGCATTAAAATCAA+TGG 0.443745 7.4:-26523492 None:intergenic
GTTGCAAATGCCTCTACCTA+TGG 0.446864 7.4:+26523615 MS.gene058693:CDS
GGTGATATAGTTGGAGTAGA+TGG 0.451551 7.4:+26524232 MS.gene058693:CDS
ATTATGCAGTGGGTTCATCT+TGG 0.455331 7.4:+26524143 MS.gene058693:CDS
AGTTAAGGTATGGGTGATGC+AGG 0.455781 7.4:+26524120 MS.gene058693:CDS
TCTCATTGAGAGCTAATAAG+TGG 0.462649 7.4:+26523825 MS.gene058693:CDS
TCTCATTTCCTTTAAATCAA+AGG 0.470272 7.4:-26523987 None:intergenic
GGAGTCGGATATTTCTTGAA+TGG 0.475353 7.4:+26523911 MS.gene058693:CDS
ACCCTCAACTGAGGATTACT+TGG 0.492115 7.4:+26523736 MS.gene058693:CDS
AATAGAAATCACTTAGGTGC+TGG 0.492971 7.4:+26523890 MS.gene058693:CDS
TATGATTTGTTGGTATTTCG+CGG 0.493165 7.4:+26524064 MS.gene058693:CDS
ATGCATTAAAATCAATGGAT+AGG 0.496899 7.4:-26523487 None:intergenic
TGCATTAAAATCAATGGATA+GGG 0.499459 7.4:-26523486 None:intergenic
GCAAGTGCGTCTGTAAGTTA+TGG 0.503203 7.4:+26523363 MS.gene058693:CDS
ACTTCGATGAAGTTAAGGTA+TGG 0.506053 7.4:+26524110 MS.gene058693:CDS
AAATTATAGGTTCGTGTAGA+GGG 0.514888 7.4:+26523576 MS.gene058693:CDS
TGCGACTCTCCTTCTTGAGA+TGG 0.518985 7.4:+26523262 MS.gene058693:CDS
TTATGAAGGTCGATTGATGA+AGG 0.520086 7.4:+26524255 MS.gene058693:CDS
TGTCGTTATTTGATGAAGAA+CGG 0.520601 7.4:-26524324 None:intergenic
ACCAAGTAATCCTCAGTTGA+GGG 0.524409 7.4:-26523737 None:intergenic
ATCTCAATCGAAATAGATAC+CGG 0.527336 7.4:-26523800 None:intergenic
ATCTCAAGAAGGAGAGTCGC+AGG 0.537429 7.4:-26523260 None:intergenic
CAGCGTAGCACAGTCTTCAC+AGG 0.538306 7.4:-26523341 None:intergenic
TAAGCTTGATCAACACCACT+AGG 0.546948 7.4:-26524382 None:intergenic
GAAATTATAGGTTCGTGTAG+AGG 0.549130 7.4:+26523575 MS.gene058693:CDS
TATATCACCACAATTTGTAA+AGG 0.551865 7.4:-26524218 None:intergenic
ATTTCTTCTCCATCTCAAGA+AGG 0.552930 7.4:-26523271 None:intergenic
CTTCGATGAAGTTAAGGTAT+GGG 0.555839 7.4:+26524111 MS.gene058693:CDS
GTTGGAGTAGATGGTTATGA+AGG 0.565206 7.4:+26524241 MS.gene058693:CDS
ACAATTTGTAAAGGATATTG+GGG 0.566127 7.4:-26524209 None:intergenic
AAGTGGAAACAAGTTGAGGT+TGG 0.569153 7.4:+26523842 MS.gene058693:CDS
CCTATAACTATTGCCGGCAA+AGG 0.570684 7.4:+26523677 MS.gene058693:CDS
TACCTATGGAATCCATCCAC+TGG 0.573050 7.4:+26523629 MS.gene058693:CDS
ACTATAACCATCATCTTCGT+AGG 0.574773 7.4:-26523771 None:intergenic
GAGGATTACTTGGTAGTTTG+GGG 0.580544 7.4:+26523746 MS.gene058693:CDS
TTGAGTTTGGAAAGGAGTTG+CGG 0.581203 7.4:-26523222 None:intergenic
TGGATGGATTCCATAGGTAG+AGG 0.582971 7.4:-26523625 None:intergenic
ATCAGCCGTTGAGTTTGGAA+AGG 0.587004 7.4:-26523230 None:intergenic
TACCAAGTAATCCTCAGTTG+AGG 0.591405 7.4:-26523738 None:intergenic
TGATTATTGAAATTCTGTTG+AGG 0.597337 7.4:+26523315 MS.gene058693:CDS
CCGGCAATAGTTATAGGAGA+CGG 0.600720 7.4:-26523671 None:intergenic
TGATGGTTATAGTTATGAGC+CGG 0.601481 7.4:+26523781 MS.gene058693:CDS
GTTACTAATAGAAATCACTT+AGG 0.605380 7.4:+26523884 MS.gene058693:CDS
AGTTGAGGGTTCGTATGTCA+AGG 0.608505 7.4:-26523723 None:intergenic
TTGATCAACACCACTAGGGA+GGG 0.614445 7.4:-26524377 None:intergenic
TTGATGAAGGTTAATGACAA+AGG 0.617719 7.4:+26524268 MS.gene058693:CDS
AAGCTTGATCAACACCACTA+GGG 0.622953 7.4:-26524381 None:intergenic
TGTTTGTTGACACCAGTGGA+TGG 0.624812 7.4:-26523641 None:intergenic
CTTGATCAACACCACTAGGG+AGG 0.626589 7.4:-26524378 None:intergenic
TATTTGTTTGTTGACACCAG+TGG 0.635309 7.4:-26523645 None:intergenic
TCTCTGCTTTCCCTCCCTAG+TGG 0.638502 7.4:+26524367 MS.gene058693:CDS
AGGATTACTTGGTAGTTTGG+GGG 0.639494 7.4:+26523747 MS.gene058693:CDS
TAATAAGTGGAAACAAGTTG+AGG 0.642343 7.4:+26523838 MS.gene058693:CDS
AATCACTTAGGTGCTGGAGT+CGG 0.649332 7.4:+26523896 MS.gene058693:CDS
CTATAATTTCAGGATGAGAA+CGG 0.654218 7.4:-26523562 None:intergenic
CACCAGTGGATGGATTCCAT+AGG 0.657114 7.4:-26523631 None:intergenic
GTGATGCAGGATTATGCAGT+GGG 0.663284 7.4:+26524133 MS.gene058693:CDS
GACATACGAACCCTCAACTG+AGG 0.668053 7.4:+26523727 MS.gene058693:CDS
CAACTCCTTTCCAAACTCAA+CGG 0.683175 7.4:+26523225 MS.gene058693:CDS
AAATGTGAAGTTGCAAAATG+GGG 0.694410 7.4:-26523404 None:intergenic
AAAGGAGTTGCGGTTGACCG+TGG 0.695345 7.4:-26523212 None:intergenic
GGTGATGCAGGATTATGCAG+TGG 0.702426 7.4:+26524132 MS.gene058693:CDS
TTGATCCGTTGCATTCACCA+CGG 0.711039 7.4:+26523195 MS.gene058693:CDS
GTTGACCGTGGTGAATGCAA+CGG 0.714044 7.4:-26523200 None:intergenic
ATTTCAGGATGAGAACGGTG+AGG 0.730403 7.4:-26523557 None:intergenic
TCATAATTATGAGACTGACA+AGG 0.730623 7.4:+26523952 MS.gene058693:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATGATAAAAAATATC+TGG - chr7.4:26524031-26524050 None:intergenic 10.0%
!! TTTCTATTAGTAACCATATA+AGG - chr7.4:26523878-26523897 None:intergenic 20.0%
!!! TATTATTGCCTTTGATTTAA+AGG + chr7.4:26523979-26523998 MS.gene058693:CDS 20.0%
! AAAATGTGAAGTTGCAAAAT+GGG - chr7.4:26523408-26523427 None:intergenic 25.0%
! ACAATTTGTAAAGGATATTG+GGG - chr7.4:26524212-26524231 None:intergenic 25.0%
! ATGCATTAAAATCAATGGAT+AGG - chr7.4:26523490-26523509 None:intergenic 25.0%
! ATTTCAATAATCACTTCTTC+AGG - chr7.4:26523308-26523327 None:intergenic 25.0%
! CACAATTTGTAAAGGATATT+GGG - chr7.4:26524213-26524232 None:intergenic 25.0%
! GTTACTAATAGAAATCACTT+AGG + chr7.4:26523884-26523903 MS.gene058693:CDS 25.0%
! TATATCACCACAATTTGTAA+AGG - chr7.4:26524221-26524240 None:intergenic 25.0%
! TATGAACATAAGTCTTTGTT+TGG - chr7.4:26523447-26523466 None:intergenic 25.0%
! TCTCATTTCCTTTAAATCAA+AGG - chr7.4:26523990-26524009 None:intergenic 25.0%
! TGATTATTGAAATTCTGTTG+AGG + chr7.4:26523315-26523334 MS.gene058693:CDS 25.0%
! TGCATTAAAATCAATGGATA+GGG - chr7.4:26523489-26523508 None:intergenic 25.0%
!! ATGAACATAAGTCTTTGTTT+GGG - chr7.4:26523446-26523465 None:intergenic 25.0%
!! TTTTTCTAAGCATTCTATTG+AGG + chr7.4:26524180-26524199 MS.gene058693:CDS 25.0%
AAATGTGAAGTTGCAAAATG+GGG - chr7.4:26523407-26523426 None:intergenic 30.0%
AAATTATAGGTTCGTGTAGA+GGG + chr7.4:26523576-26523595 MS.gene058693:CDS 30.0%
ACAAATTGTGGTGATATAGT+TGG + chr7.4:26524223-26524242 MS.gene058693:CDS 30.0%
ATCTCAATCGAAATAGATAC+CGG - chr7.4:26523803-26523822 None:intergenic 30.0%
CCAATATCCTTTACAAATTG+TGG + chr7.4:26524211-26524230 MS.gene058693:CDS 30.0%
CCACAATTTGTAAAGGATAT+TGG - chr7.4:26524214-26524233 None:intergenic 30.0%
CTATAATTTCAGGATGAGAA+CGG - chr7.4:26523565-26523584 None:intergenic 30.0%
GAAAATGTGAAGTTGCAAAA+TGG - chr7.4:26523409-26523428 None:intergenic 30.0%
TAATAAGTGGAAACAAGTTG+AGG + chr7.4:26523838-26523857 MS.gene058693:CDS 30.0%
TCATAATTATGAGACTGACA+AGG + chr7.4:26523952-26523971 MS.gene058693:CDS 30.0%
TGTCGTTATTTGATGAAGAA+CGG - chr7.4:26524327-26524346 None:intergenic 30.0%
TTGATGAAGGTTAATGACAA+AGG + chr7.4:26524268-26524287 MS.gene058693:CDS 30.0%
! TCTTGAATGGTTCTATTCAT+TGG + chr7.4:26523924-26523943 MS.gene058693:CDS 30.0%
! TTCTCGAGATTATGATTTGT+TGG + chr7.4:26524054-26524073 MS.gene058693:CDS 30.0%
!! TATGATTTGTTGGTATTTCG+CGG + chr7.4:26524064-26524083 MS.gene058693:CDS 30.0%
AATAGAAATCACTTAGGTGC+TGG + chr7.4:26523890-26523909 MS.gene058693:CDS 35.0%
ACTATAACCATCATCTTCGT+AGG - chr7.4:26523774-26523793 None:intergenic 35.0%
ACTTCGATGAAGTTAAGGTA+TGG + chr7.4:26524110-26524129 MS.gene058693:CDS 35.0%
ATTTCTTCTCCATCTCAAGA+AGG - chr7.4:26523274-26523293 None:intergenic 35.0%
CGTTCTCATCCTGAAATTAT+AGG + chr7.4:26523563-26523582 MS.gene058693:CDS 35.0%
CTACACGAACCTATAATTTC+AGG - chr7.4:26523575-26523594 None:intergenic 35.0%
CTTCGATGAAGTTAAGGTAT+GGG + chr7.4:26524111-26524130 MS.gene058693:CDS 35.0%
CTTGAGAATATAACCTTTGC+CGG - chr7.4:26523693-26523712 None:intergenic 35.0%
GAAATTATAGGTTCGTGTAG+AGG + chr7.4:26523575-26523594 MS.gene058693:CDS 35.0%
GAGCGATGCATTAAAATCAA+TGG - chr7.4:26523495-26523514 None:intergenic 35.0%
TCTCATTGAGAGCTAATAAG+TGG + chr7.4:26523825-26523844 MS.gene058693:CDS 35.0%
TGATGGTTATAGTTATGAGC+CGG + chr7.4:26523781-26523800 MS.gene058693:CDS 35.0%
TGGTTCTCATTTGCCTTATA+TGG + chr7.4:26523862-26523881 MS.gene058693:CDS 35.0%
TGTGAACTTCGATGAAGTTA+AGG + chr7.4:26524105-26524124 MS.gene058693:CDS 35.0%
TTATGAAGGTCGATTGATGA+AGG + chr7.4:26524255-26524274 MS.gene058693:CDS 35.0%
! TATTTGTTTGTTGACACCAG+TGG - chr7.4:26523648-26523667 None:intergenic 35.0%
! TGAGGATTACTTGGTAGTTT+GGG + chr7.4:26523745-26523764 MS.gene058693:CDS 35.0%
AAATCAATGGATAGGGCTTC+AGG - chr7.4:26523482-26523501 None:intergenic 40.0%
AACGGTGAGGCAAAAAATCA+AGG - chr7.4:26523547-26523566 None:intergenic 40.0%
AAGCTTGATCAACACCACTA+GGG - chr7.4:26524384-26524403 None:intergenic 40.0%
ACCAAGTAATCCTCAGTTGA+GGG - chr7.4:26523740-26523759 None:intergenic 40.0%
CAACTCCTTTCCAAACTCAA+CGG + chr7.4:26523225-26523244 MS.gene058693:CDS 40.0%
GGAGTCGGATATTTCTTGAA+TGG + chr7.4:26523911-26523930 MS.gene058693:CDS 40.0%
GGTGATATAGTTGGAGTAGA+TGG + chr7.4:26524232-26524251 MS.gene058693:CDS 40.0%
GTTGGAGTAGATGGTTATGA+AGG + chr7.4:26524241-26524260 MS.gene058693:CDS 40.0%
TAAGCTTGATCAACACCACT+AGG - chr7.4:26524385-26524404 None:intergenic 40.0%
TACCAAGTAATCCTCAGTTG+AGG - chr7.4:26523741-26523760 None:intergenic 40.0%
TGAGGCAAAAAATCAAGGCT+TGG - chr7.4:26523542-26523561 None:intergenic 40.0%
TTGAGTTTGGAAAGGAGTTG+CGG - chr7.4:26523225-26523244 None:intergenic 40.0%
! AAGTGGAAACAAGTTGAGGT+TGG + chr7.4:26523842-26523861 MS.gene058693:CDS 40.0%
! AGGATTACTTGGTAGTTTGG+GGG + chr7.4:26523747-26523766 MS.gene058693:CDS 40.0%
! ATTATGCAGTGGGTTCATCT+TGG + chr7.4:26524143-26524162 MS.gene058693:CDS 40.0%
! CTGAGGATTACTTGGTAGTT+TGG + chr7.4:26523744-26523763 MS.gene058693:CDS 40.0%
! GAATGGTTCTATTCATTGGC+TGG + chr7.4:26523928-26523947 MS.gene058693:CDS 40.0%
! GAGGATTACTTGGTAGTTTG+GGG + chr7.4:26523746-26523765 MS.gene058693:CDS 40.0%
AAGTCATCAGCCGTTGAGTT+TGG - chr7.4:26523238-26523257 None:intergenic 45.0%
ACCCTCAACTGAGGATTACT+TGG + chr7.4:26523736-26523755 MS.gene058693:CDS 45.0%
AGTTAAGGTATGGGTGATGC+AGG + chr7.4:26524120-26524139 MS.gene058693:CDS 45.0%
AGTTGAGGGTTCGTATGTCA+AGG - chr7.4:26523726-26523745 None:intergenic 45.0%
ATCAGCCGTTGAGTTTGGAA+AGG - chr7.4:26523233-26523252 None:intergenic 45.0%
ATTTCAGGATGAGAACGGTG+AGG - chr7.4:26523560-26523579 None:intergenic 45.0%
CCGGCAATAGTTATAGGAGA+CGG - chr7.4:26523674-26523693 None:intergenic 45.0%
CCGTCTCCTATAACTATTGC+CGG + chr7.4:26523671-26523690 MS.gene058693:CDS 45.0%
CCTATAACTATTGCCGGCAA+AGG + chr7.4:26523677-26523696 MS.gene058693:CDS 45.0%
CCTTTGCCGGCAATAGTTAT+AGG - chr7.4:26523680-26523699 None:intergenic 45.0%
GCAAGTGCGTCTGTAAGTTA+TGG + chr7.4:26523363-26523382 MS.gene058693:CDS 45.0%
GTGATGCAGGATTATGCAGT+GGG + chr7.4:26524133-26524152 MS.gene058693:CDS 45.0%
GTTGCAAATGCCTCTACCTA+TGG + chr7.4:26523615-26523634 MS.gene058693:CDS 45.0%
TACCTATGGAATCCATCCAC+TGG + chr7.4:26523629-26523648 MS.gene058693:CDS 45.0%
TTGATCAACACCACTAGGGA+GGG - chr7.4:26524380-26524399 None:intergenic 45.0%
TTGATCCGTTGCATTCACCA+CGG + chr7.4:26523195-26523214 MS.gene058693:CDS 45.0%
! TGGATGGATTCCATAGGTAG+AGG - chr7.4:26523628-26523647 None:intergenic 45.0%
! TGTTTGTTGACACCAGTGGA+TGG - chr7.4:26523644-26523663 None:intergenic 45.0%
!! AATCACTTAGGTGCTGGAGT+CGG + chr7.4:26523896-26523915 MS.gene058693:CDS 45.0%
ATCTCAAGAAGGAGAGTCGC+AGG - chr7.4:26523263-26523282 None:intergenic 50.0%
CTTGATCAACACCACTAGGG+AGG - chr7.4:26524381-26524400 None:intergenic 50.0%
GACATACGAACCCTCAACTG+AGG + chr7.4:26523727-26523746 MS.gene058693:CDS 50.0%
GGTGATGCAGGATTATGCAG+TGG + chr7.4:26524132-26524151 MS.gene058693:CDS 50.0%
GTTGACCGTGGTGAATGCAA+CGG - chr7.4:26523203-26523222 None:intergenic 50.0%
TGCGACTCTCCTTCTTGAGA+TGG + chr7.4:26523262-26523281 MS.gene058693:CDS 50.0%
! CACCAGTGGATGGATTCCAT+AGG - chr7.4:26523634-26523653 None:intergenic 50.0%
AAAGGAGTTGCGGTTGACCG+TGG - chr7.4:26523215-26523234 None:intergenic 55.0%
CAGCGTAGCACAGTCTTCAC+AGG - chr7.4:26523344-26523363 None:intergenic 55.0%
TCTCTGCTTTCCCTCCCTAG+TGG + chr7.4:26524367-26524386 MS.gene058693:CDS 55.0%
TGGGGGACCTACGAAGATGA+TGG + chr7.4:26523764-26523783 MS.gene058693:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 26523191 26524405 26523191 ID=MS.gene058693
chr7.4 mRNA 26523191 26524405 26523191 ID=MS.gene058693.t1;Parent=MS.gene058693
chr7.4 exon 26523191 26524405 26523191 ID=MS.gene058693.t1.exon1;Parent=MS.gene058693.t1
chr7.4 CDS 26523191 26524405 26523191 ID=cds.MS.gene058693.t1;Parent=MS.gene058693.t1
Gene Sequence

>MS.gene058693

ATGATTGATCCGTTGCATTCACCACGGTCAACCGCAACTCCTTTCCAAACTCAACGGCTGATGACTTGTCCTGCGACTCTCCTTCTTGAGATGGAGAAGAAATGCGAATATCTGCCTGAAGAAGTGATTATTGAAATTCTGTTGAGGTTACCTGTGAAGACTGTGCTACGCTGCAAGTGCGTCTGTAAGTTATGGCTTTCTCTTATCTCTGATCCCCATTTTGCAACTTCACATTTTCAACTTGATATCTCACCCAAACAAAGACTTATGTTCATAGATTTTCATGTTCCTGAAGCCCTATCCATTGATTTTAATGCATCGCTCAAAGATGATTCTGCTTATCATTCACCAAGCCTTGATTTTTTGCCTCACCGTTCTCATCCTGAAATTATAGGTTCGTGTAGAGGGTTTCTATTATTGCAATGTTGCAAATGCCTCTACCTATGGAATCCATCCACTGGTGTCAACAAACAAATACATCCGTCTCCTATAACTATTGCCGGCAAAGGTTATATTCTCAAGTTTCTGTATGCCTTGACATACGAACCCTCAACTGAGGATTACTTGGTAGTTTGGGGGACCTACGAAGATGATGGTTATAGTTATGAGCCGGTATCTATTTCGATTGAGATTTTCTCATTGAGAGCTAATAAGTGGAAACAAGTTGAGGTTGGTTCTCATTTGCCTTATATGGTTACTAATAGAAATCACTTAGGTGCTGGAGTCGGATATTTCTTGAATGGTTCTATTCATTGGCTGGTTCATAATTATGAGACTGACAAGGATGTTATTATTGCCTTTGATTTAAAGGAAATGAGAATCTCTGAGATAGCTCTGCCAGATATTTTTTATCATTATTACTGTTCTCGAGATTATGATTTGTTGGTATTTCGCGGACTTATCAGTGCATGTATTGTGAACTTCGATGAAGTTAAGGTATGGGTGATGCAGGATTATGCAGTGGGTTCATCTTGGACTCAGACTCTTGTTTTTTCTAAGCATTCTATTGAGGACTTTTCCCCAATATCCTTTACAAATTGTGGTGATATAGTTGGAGTAGATGGTTATGAAGGTCGATTGATGAAGGTTAATGACAAAGGACAGCTTCTAGAGCGTCGCTTCTATCATCGTTTCCGTTCTTCATCAAATAACGACAAAATGACTTTGTATACAGAGTCTCTGCTTTCCCTCCCTAGTGGTGTTGATCAAGCTTAA

Protein sequence

>MS.gene058693.t1

MIDPLHSPRSTATPFQTQRLMTCPATLLLEMEKKCEYLPEEVIIEILLRLPVKTVLRCKCVCKLWLSLISDPHFATSHFQLDISPKQRLMFIDFHVPEALSIDFNASLKDDSAYHSPSLDFLPHRSHPEIIGSCRGFLLLQCCKCLYLWNPSTGVNKQIHPSPITIAGKGYILKFLYALTYEPSTEDYLVVWGTYEDDGYSYEPVSISIEIFSLRANKWKQVEVGSHLPYMVTNRNHLGAGVGYFLNGSIHWLVHNYETDKDVIIAFDLKEMRISEIALPDIFYHYYCSRDYDLLVFRGLISACIVNFDEVKVWVMQDYAVGSSWTQTLVFSKHSIEDFSPISFTNCGDIVGVDGYEGRLMKVNDKGQLLERRFYHRFRSSSNNDKMTLYTESLLSLPSGVDQA