AlfalfaGEDB | MS.gene26101

M. sativa cultivar XinJiangDaYe / MS.gene26101

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26101.t1	PNY00770.1	51.5	237	93	9	15	243	27	249	1.80E-47	199.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26101.t1	A0A2K3NCL9	51.5	237	93	9	15	243	27	249	1.3e-47	199.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene26101	MS.gene009892	PPI
MS.gene81242	MS.gene26101	PPI
MS.gene27283	MS.gene26101	PPI
MS.gene26101	MS.gene061241	PPI
MS.gene26101	MS.gene51192	PPI
MS.gene42444	MS.gene26101	PPI
MS.gene26101	MS.gene51188	PPI
MS.gene51202	MS.gene26101	PPI
MS.gene26101	MS.gene033875	PPI
MS.gene87562	MS.gene26101	PPI
MS.gene26101	MS.gene041489	PPI
MS.gene26101	MS.gene38220	PPI
MS.gene26101	MS.gene40986	PPI
MS.gene26101	MS.gene36704	PPI
MS.gene26101	MS.gene041394	PPI
MS.gene26101	MS.gene034688	PPI
MS.gene26101	MS.gene03060	PPI
MS.gene26101	MS.gene24213	PPI
MS.gene26101	MS.gene033440	PPI
MS.gene26101	MS.gene31637	PPI
MS.gene26101	MS.gene024011	PPI
MS.gene26101	MS.gene58241	PPI
MS.gene064104	MS.gene26101	PPI
MS.gene26101	MS.gene064109	PPI
MS.gene26101	MS.gene058696	PPI
MS.gene26101	MS.gene035238	PPI
MS.gene26101	MS.gene85043	PPI
MS.gene26101	MS.gene064114	PPI
MS.gene43789	MS.gene26101	PPI
MS.gene57528	MS.gene26101	PPI
MS.gene26101	MS.gene062698	PPI
MS.gene006711	MS.gene26101	PPI
MS.gene26101	MS.gene80610	PPI
MS.gene072177	MS.gene26101	PPI
MS.gene064091	MS.gene26101	PPI
MS.gene045476	MS.gene26101	PPI
MS.gene50307	MS.gene26101	PPI
MS.gene43796	MS.gene26101	PPI
MS.gene26101	MS.gene40886	PPI
MS.gene58312	MS.gene26101	PPI
MS.gene26101	MS.gene041391	PPI
MS.gene26101	MS.gene033443	PPI
MS.gene51191	MS.gene26101	PPI
MS.gene26101	MS.gene021553	PPI
MS.gene44887	MS.gene26101	PPI
MS.gene26101	MS.gene045474	PPI
MS.gene26101	MS.gene44887	PPI
MS.gene26101	MS.gene058701	PPI
MS.gene26101	MS.gene036558	PPI
MS.gene26101	MS.gene87554	PPI
MS.gene26101	MS.gene009891	PPI
MS.gene26101	MS.gene27051	PPI
MS.gene036583	MS.gene26101	PPI
MS.gene88780	MS.gene26101	PPI
MS.gene26101	MS.gene048193	PPI
MS.gene26101	MS.gene024420	PPI
MS.gene26101	MS.gene016220	PPI
MS.gene26101	MS.gene57533	PPI
MS.gene26101	MS.gene024008	PPI
MS.gene26101	MS.gene50337	PPI
MS.gene26101	MS.gene063670	PPI
MS.gene71159	MS.gene26101	PPI
MS.gene96448	MS.gene26101	PPI
MS.gene26101	MS.gene54541	PPI
MS.gene26101	MS.gene041393	PPI
MS.gene041392	MS.gene26101	PPI
MS.gene26101	MS.gene060368	PPI
MS.gene26101	MS.gene053299	PPI
MS.gene26101	MS.gene28758	PPI
MS.gene26101	MS.gene044429	PPI
MS.gene63658	MS.gene26101	PPI
MS.gene033081	MS.gene26101	PPI
MS.gene26101	MS.gene57531	PPI
MS.gene031591	MS.gene26101	PPI
MS.gene26101	MS.gene27284	PPI
MS.gene26101	MS.gene019503	PPI
MS.gene26101	MS.gene48221	PPI
MS.gene019503	MS.gene26101	PPI
MS.gene87559	MS.gene26101	PPI
MS.gene26101	MS.gene51190	PPI
MS.gene26101	MS.gene58319	PPI
MS.gene26101	MS.gene71159	PPI
MS.gene26101	MS.gene59943	PPI
MS.gene26101	MS.gene044426	PPI
MS.gene26101	MS.gene034681	PPI
MS.gene041475	MS.gene26101	PPI
MS.gene31587	MS.gene26101	PPI
MS.gene26101	MS.gene033442	PPI
MS.gene033441	MS.gene26101	PPI
MS.gene063826	MS.gene26101	PPI
MS.gene26101	MS.gene44428	PPI
MS.gene26101	MS.gene058669	PPI
MS.gene26101	MS.gene066120	PPI
MS.gene26101	MS.gene035235	PPI
MS.gene58239	MS.gene26101	PPI
MS.gene26101	MS.gene57528	PPI
MS.gene066641	MS.gene26101	PPI
MS.gene000038	MS.gene26101	PPI
MS.gene26101	MS.gene024000	PPI
MS.gene26101	MS.gene012215	PPI
MS.gene57531	MS.gene26101	PPI
MS.gene064111	MS.gene26101	PPI
MS.gene26829	MS.gene26101	PPI
MS.gene39262	MS.gene26101	PPI
MS.gene26101	MS.gene033079	PPI
MS.gene053256	MS.gene26101	PPI
MS.gene26101	MS.gene034677	PPI
MS.gene025887	MS.gene26101	PPI
MS.gene26101	MS.gene055694	PPI
MS.gene26101	MS.gene059101	PPI
MS.gene75875	MS.gene26101	PPI
MS.gene041470	MS.gene26101	PPI
MS.gene058694	MS.gene26101	PPI
MS.gene26101	MS.gene58316	PPI
MS.gene26101	MS.gene033430	PPI
MS.gene26101	MS.gene87584	PPI
MS.gene26101	MS.gene58321	PPI
MS.gene26101	MS.gene87564	PPI
MS.gene26101	MS.gene58315	PPI
MS.gene015089	MS.gene26101	PPI
MS.gene006710	MS.gene26101	PPI
MS.gene58722	MS.gene26101	PPI
MS.gene011679	MS.gene26101	PPI
MS.gene26101	MS.gene90743	PPI
MS.gene64001	MS.gene26101	PPI
MS.gene26101	MS.gene041473	PPI
MS.gene57533	MS.gene26101	PPI
MS.gene26101	MS.gene50311	PPI
MS.gene26101	MS.gene85454	PPI
MS.gene36704	MS.gene26101	PPI
MS.gene032970	MS.gene26101	PPI
MS.gene26101	MS.gene064112	PPI
MS.gene26101	MS.gene036556	PPI
MS.gene26101	MS.gene57538	PPI
MS.gene77856	MS.gene26101	PPI
MS.gene26101	MS.gene060367	PPI
MS.gene26101	MS.gene058693	PPI
MS.gene26101	MS.gene27319	PPI
MS.gene26101	MS.gene041395	PPI
MS.gene58313	MS.gene26101	PPI
MS.gene26101	MS.gene57536	PPI
MS.gene26101	MS.gene51200	PPI
MS.gene066622	MS.gene26101	PPI
MS.gene63655	MS.gene26101	PPI
MS.gene44883	MS.gene26101	PPI
MS.gene26101	MS.gene046958	PPI
MS.gene26101	MS.gene24286	PPI
MS.gene26101	MS.gene064083	PPI
MS.gene41046	MS.gene26101	PPI
MS.gene87588	MS.gene26101	PPI
MS.gene017412	MS.gene26101	PPI
MS.gene26101	MS.gene58783	PPI
MS.gene80884	MS.gene26101	PPI
MS.gene26101	MS.gene40988	PPI
MS.gene26101	MS.gene39265	PPI
MS.gene26101	MS.gene24173	PPI
MS.gene26101	MS.gene036584	PPI
MS.gene26101	MS.gene036662	PPI
MS.gene009883	MS.gene26101	PPI
MS.gene069075	MS.gene26101	PPI
MS.gene033427	MS.gene26101	PPI
MS.gene26101	MS.gene42451	PPI
MS.gene26101	MS.gene50304	PPI
MS.gene26101	MS.gene035261	PPI
MS.gene041474	MS.gene26101	PPI
MS.gene26101	MS.gene023999	PPI
MS.gene27020	MS.gene26101	PPI
MS.gene066620	MS.gene26101	PPI
MS.gene035236	MS.gene26101	PPI
MS.gene26101	MS.gene69307	PPI
MS.gene041388	MS.gene26101	PPI
MS.gene26101	MS.gene036581	PPI
MS.gene96126	MS.gene26101	PPI
MS.gene26101	MS.gene019507	PPI
MS.gene26101	MS.gene033431	PPI
MS.gene51208	MS.gene26101	PPI
MS.gene016524	MS.gene26101	PPI
MS.gene50304	MS.gene26101	PPI
MS.gene26101	MS.gene034762	PPI
MS.gene26101	MS.gene50320	PPI
MS.gene88776	MS.gene26101	PPI
MS.gene26101	MS.gene58314	PPI
MS.gene26101	MS.gene87557	PPI
MS.gene35068	MS.gene26101	PPI
MS.gene90744	MS.gene26101	PPI
MS.gene26101	MS.gene035263	PPI
MS.gene51204	MS.gene26101	PPI
MS.gene26101	MS.gene67501	PPI
MS.gene26101	MS.gene96406	PPI
MS.gene036557	MS.gene26101	PPI
MS.gene041393	MS.gene26101	PPI
MS.gene50329	MS.gene26101	PPI
MS.gene26101	MS.gene27285	PPI
MS.gene26101	MS.gene035262	PPI
MS.gene26101	MS.gene028390	PPI
MS.gene57537	MS.gene26101	PPI
MS.gene26101	MS.gene40878	PPI
MS.gene26101	MS.gene96407	PPI
MS.gene059156	MS.gene26101	PPI
MS.gene84698	MS.gene26101	PPI
MS.gene26101	MS.gene058703	PPI
MS.gene82082	MS.gene26101	PPI
MS.gene26101	MS.gene047279	PPI
MS.gene26101	MS.gene060370	PPI
MS.gene26101	MS.gene50305	PPI
MS.gene26101	MS.gene024002	PPI
MS.gene26101	MS.gene032969	PPI
MS.gene26101	MS.gene68890	PPI
MS.gene26101	MS.gene50297	PPI
MS.gene57535	MS.gene26101	PPI
MS.gene26101	MS.gene42445	PPI
MS.gene26101	MS.gene86273	PPI
MS.gene26101	MS.gene26830	PPI
MS.gene26101	MS.gene40985	PPI
MS.gene26101	MS.gene22715	PPI
MS.gene26101	MS.gene038756	PPI
MS.gene87200	MS.gene26101	PPI
MS.gene26101	MS.gene51207	PPI
MS.gene26101	MS.gene63657	PPI
MS.gene033432	MS.gene26101	PPI
MS.gene26101	MS.gene36595	PPI
MS.gene26101	MS.gene024004	PPI
MS.gene26101	MS.gene045140	PPI
MS.gene26101	MS.gene070462	PPI
MS.gene44885	MS.gene26101	PPI
MS.gene26101	MS.gene061240	PPI
MS.gene26101	MS.gene54049	PPI
MS.gene066635	MS.gene26101	PPI
MS.gene26101	MS.gene064086	PPI
MS.gene010758	MS.gene26101	PPI
MS.gene26101	MS.gene035234	PPI
MS.gene26101	MS.gene058989	PPI
MS.gene87586	MS.gene26101	PPI
MS.gene26101	MS.gene041468	PPI
MS.gene26101	MS.gene015089	PPI
MS.gene26101	MS.gene066639	PPI
MS.gene26101	MS.gene42447	PPI
MS.gene50339	MS.gene26101	PPI
MS.gene26101	MS.gene51189	PPI
MS.gene26101	MS.gene64203	PPI
MS.gene060366	MS.gene26101	PPI
MS.gene26101	MS.gene24826	PPI
MS.gene26101	MS.gene044425	PPI
MS.gene26101	MS.gene032970	PPI
MS.gene42452	MS.gene26101	PPI
MS.gene57529	MS.gene26101	PPI
MS.gene063414	MS.gene26101	PPI
MS.gene26101	MS.gene59637	PPI
MS.gene40902	MS.gene26101	PPI
MS.gene26101	MS.gene27022	PPI
MS.gene57526	MS.gene26101	PPI
MS.gene26101	MS.gene87585	PPI
MS.gene26957	MS.gene26101	PPI
MS.gene97996	MS.gene26101	PPI
MS.gene26101	MS.gene024009	PPI
MS.gene26101	MS.gene036599	PPI
MS.gene036582	MS.gene26101	PPI
MS.gene26101	MS.gene40887	PPI
MS.gene58320	MS.gene26101	PPI
MS.gene26101	MS.gene42444	PPI
MS.gene26101	MS.gene006705	PPI
MS.gene26101	MS.gene035237	PPI
MS.gene58781	MS.gene26101	PPI
MS.gene011106	MS.gene26101	PPI
MS.gene62398	MS.gene26101	PPI
MS.gene44892	MS.gene26101	PPI
MS.gene60027	MS.gene26101	PPI
MS.gene26101	MS.gene000036	PPI
MS.gene44886	MS.gene26101	PPI
MS.gene26101	MS.gene50309	PPI
MS.gene40904	MS.gene26101	PPI
MS.gene041390	MS.gene26101	PPI
MS.gene26101	MS.gene51199	PPI
MS.gene92376	MS.gene26101	PPI
MS.gene000035	MS.gene26101	PPI
MS.gene26101	MS.gene036664	PPI
MS.gene26101	MS.gene053257	PPI
MS.gene87569	MS.gene26101	PPI
MS.gene26101	MS.gene77858	PPI
MS.gene26101	MS.gene51201	PPI
MS.gene87573	MS.gene26101	PPI
MS.gene041491	MS.gene26101	PPI
MS.gene26101	MS.gene009893	PPI
MS.gene26101	MS.gene045475	PPI
MS.gene26101	MS.gene50336	PPI
MS.gene26101	MS.gene57526	PPI
MS.gene019504	MS.gene26101	PPI
MS.gene059096	MS.gene26101	PPI
MS.gene26101	MS.gene77704	PPI
MS.gene58716	MS.gene26101	PPI
MS.gene033444	MS.gene26101	PPI
MS.gene26101	MS.gene033083	PPI
MS.gene019505	MS.gene26101	PPI
MS.gene50306	MS.gene26101	PPI
MS.gene58785	MS.gene26101	PPI
MS.gene034690	MS.gene26101	PPI
MS.gene26949	MS.gene26101	PPI
MS.gene26101	MS.gene033081	PPI
MS.gene26101	MS.gene036663	PPI
MS.gene26101	MS.gene68580	PPI
MS.gene036760	MS.gene26101	PPI
MS.gene77857	MS.gene26101	PPI
MS.gene58311	MS.gene26101	PPI
MS.gene26101	MS.gene57525	PPI
MS.gene57527	MS.gene26101	PPI
MS.gene26101	MS.gene059157	PPI
MS.gene26101	MS.gene023996	PPI
MS.gene26101	MS.gene030114	PPI
MS.gene26101	MS.gene045473	PPI
MS.gene033426	MS.gene26101	PPI
MS.gene26101	MS.gene50301	PPI
MS.gene59639	MS.gene26101	PPI
MS.gene26101	MS.gene88774	PPI
MS.gene50298	MS.gene26101	PPI
MS.gene26101	MS.gene031590	PPI
MS.gene67687	MS.gene26101	PPI
MS.gene26101	MS.gene40984	PPI
MS.gene26101	MS.gene066623	PPI
MS.gene26101	MS.gene064108	PPI
MS.gene063670	MS.gene26101	PPI
MS.gene26101	MS.gene064090	PPI
MS.gene26101	MS.gene24208	PPI
MS.gene26101	MS.gene58317	PPI
MS.gene019506	MS.gene26101	PPI
MS.gene50326	MS.gene26101	PPI
MS.gene26101	MS.gene90742	PPI
MS.gene058692	MS.gene26101	PPI
MS.gene26101	MS.gene24212	PPI
MS.gene26101	MS.gene50332	PPI
MS.gene26101	MS.gene024979	PPI
MS.gene69309	MS.gene26101	PPI
MS.gene26101	MS.gene58240	PPI
MS.gene26101	MS.gene063472	PPI
MS.gene26101	MS.gene43790	PPI
MS.gene26101	MS.gene57717	PPI
MS.gene26101	MS.gene034680	PPI
MS.gene034686	MS.gene26101	PPI
MS.gene070461	MS.gene26101	PPI
MS.gene26101	MS.gene27021	PPI
MS.gene26101	MS.gene044563	PPI
MS.gene26101	MS.gene50327	PPI
MS.gene26101	MS.gene066626	PPI
MS.gene26101	MS.gene40982	PPI
MS.gene26101	MS.gene063474	PPI
MS.gene26101	MS.gene88416	PPI
MS.gene87563	MS.gene26101	PPI
MS.gene26101	MS.gene57530	PPI
MS.gene26101	MS.gene57532	PPI
MS.gene26101	MS.gene003076	PPI
MS.gene051820	MS.gene26101	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26101.t1	MTR_1g068860	49.362	235	100	4	15	242	27	249	9.75e-60	193
MS.gene26101.t1	MTR_2g026010	51.046	239	94	7	15	241	27	254	1.01e-58	191
MS.gene26101.t1	MTR_1g068875	48.498	233	102	5	15	242	27	246	7.96e-57	186
MS.gene26101.t1	MTR_1g068835	44.578	249	117	6	2	242	12	247	1.76e-55	182
MS.gene26101.t1	MTR_2g031700	48.936	235	98	7	15	243	29	247	3.34e-55	179
MS.gene26101.t1	MTR_2g028110	50.638	235	95	9	15	237	27	252	8.06e-54	178
MS.gene26101.t1	MTR_2g031720	48.770	244	99	9	15	245	29	259	1.16e-52	176
MS.gene26101.t1	MTR_2g031640	48.918	231	97	8	15	238	29	245	4.26e-52	174
MS.gene26101.t1	MTR_2g024110	47.321	224	99	6	16	234	28	237	1.62e-51	172
MS.gene26101.t1	MTR_2g031680	50.893	224	90	8	15	233	29	237	1.22e-49	167
MS.gene26101.t1	MTR_0667s0010	45.228	241	111	7	15	242	29	261	5.81e-49	166
MS.gene26101.t1	MTR_2g426090	46.748	246	98	11	15	237	29	264	9.16e-49	166
MS.gene26101.t1	MTR_2g426060	46.988	249	102	10	15	242	29	268	9.66e-49	166
MS.gene26101.t1	MTR_2g028130	43.825	251	111	6	15	242	28	271	5.15e-48	164
MS.gene26101.t1	MTR_8g099460	46.414	237	105	7	15	237	28	256	9.19e-47	160
MS.gene26101.t1	MTR_4g006270	47.788	226	83	9	14	235	26	220	1.20e-45	157
MS.gene26101.t1	MTR_2g425980	44.167	240	107	8	15	235	28	259	1.48e-44	155
MS.gene26101.t1	MTR_2g024100	45.059	253	113	9	15	249	30	274	2.50e-43	151
MS.gene26101.t1	MTR_2g426070	41.935	248	111	8	15	237	29	268	7.27e-43	150
MS.gene26101.t1	MTR_2g028160	42.520	254	110	9	15	241	28	272	1.51e-41	147
MS.gene26101.t1	MTR_2g025420	42.966	263	117	11	15	251	29	284	5.53e-41	145
MS.gene26101.t1	MTR_1g068905	44.309	246	95	10	1	234	8	223	1.08e-40	142
MS.gene26101.t1	MTR_2g426020	44.068	236	105	8	16	232	30	257	5.04e-40	142
MS.gene26101.t1	MTR_4g133170	39.516	248	121	9	15	249	27	258	5.17e-40	142
MS.gene26101.t1	MTR_2g021050	42.616	237	102	6	15	242	28	239	5.55e-40	142
MS.gene26101.t1	MTR_3g083010	42.915	247	103	10	15	232	29	266	1.67e-39	141
MS.gene26101.t1	MTR_2g028140	40.143	279	120	12	1	242	9	277	7.89e-38	137
MS.gene26101.t1	MTR_4g070550	39.313	262	126	10	5	242	19	271	3.09e-35	130
MS.gene26101.t1	MTR_2g040050	40.323	186	74	4	54	234	16	169	5.87e-34	123
MS.gene26101.t1	MTR_2g022170	59.406	101	36	2	16	116	28	123	6.55e-30	109
MS.gene26101.t1	MTR_2g025960	42.614	176	78	6	77	237	3	170	1.15e-29	113
MS.gene26101.t1	MTR_7g110360	44.311	167	63	6	2	147	47	204	1.10e-26	105
MS.gene26101.t1	MTR_3g086970	44.751	181	70	12	18	193	14	169	4.74e-23	92.8
MS.gene26101.t1	MTR_5g083940	39.706	204	69	8	15	218	27	176	4.80e-22	93.2
MS.gene26101.t1	MTR_6g007150	31.053	190	105	8	52	233	45	216	9.37e-18	81.6
MS.gene26101.t1	MTR_3g007360	30.870	230	132	9	17	232	77	293	5.58e-17	79.7
MS.gene26101.t1	MTR_3g007410	31.624	234	125	12	17	232	77	293	1.50e-16	78.6
MS.gene26101.t1	MTR_7g013590	28.319	226	144	7	16	233	60	275	3.94e-16	77.4
MS.gene26101.t1	MTR_4g061340	28.676	272	142	13	6	250	40	286	1.26e-15	75.9
MS.gene26101.t1	MTR_6g021880	28.511	235	138	11	17	233	45	267	2.12e-14	72.4
MS.gene26101.t1	MTR_2g437190	47.619	84	39	1	34	117	56	134	4.74e-14	68.6
MS.gene26101.t1	MTR_7g028660	27.586	261	150	11	1	233	15	264	8.44e-14	70.5
MS.gene26101.t1	MTR_8g013010	31.325	166	96	5	62	224	134	284	9.19e-14	70.1
MS.gene26101.t1	MTR_3g007330	27.419	248	134	10	6	233	62	283	2.24e-13	69.3
MS.gene26101.t1	MTR_6g017295	24.752	202	131	6	62	249	24	218	5.28e-13	68.6
MS.gene26101.t1	MTR_4g055060	28.191	188	116	9	59	240	108	282	5.99e-13	68.2
MS.gene26101.t1	MTR_2g078900	27.848	237	129	12	17	237	58	268	2.13e-12	66.2
MS.gene26101.t1	MTR_0044s0300	28.814	236	133	12	17	237	63	278	2.65e-12	66.2
MS.gene26101.t1	MTR_8g073550	31.613	155	92	5	18	172	74	214	3.94e-12	64.3
MS.gene26101.t1	MTR_3g009300	31.000	200	109	11	55	247	78	255	5.80e-12	65.1
MS.gene26101.t1	MTR_6g060650	28.662	157	94	5	80	233	113	254	5.81e-12	65.1
MS.gene26101.t1	MTR_7g009265	26.829	205	124	9	62	249	14	209	5.99e-12	64.7
MS.gene26101.t1	MTR_6g017280	25.296	253	167	8	6	241	23	270	8.99e-12	64.7
MS.gene26101.t1	MTR_6g065980	28.099	242	133	11	17	246	41	253	1.72e-11	63.5
MS.gene26101.t1	MTR_3g036290	26.613	248	147	9	16	252	46	269	1.96e-11	63.5
MS.gene26101.t1	MTR_5g070080	31.953	169	88	8	77	238	122	270	2.04e-11	63.5
MS.gene26101.t1	MTR_2g021190	25.379	264	154	9	1	241	25	268	2.32e-11	63.5
MS.gene26101.t1	MTR_4g117720	30.625	160	94	6	77	233	108	253	2.36e-11	63.2
MS.gene26101.t1	MTR_4g094365	30.055	183	107	7	53	232	77	241	2.45e-11	63.2
MS.gene26101.t1	MTR_5g057790	28.902	173	99	8	78	244	141	295	2.73e-11	63.2
MS.gene26101.t1	MTR_2g021800	24.057	212	132	6	61	249	110	315	3.24e-11	63.2
MS.gene26101.t1	MTR_3g010390	27.935	247	138	12	17	240	58	287	3.68e-11	62.8
MS.gene26101.t1	MTR_1g050542	28.750	160	91	6	77	233	146	285	4.28e-11	62.8
MS.gene26101.t1	MTR_2g046900	28.689	244	145	9	16	244	52	281	5.15e-11	62.4
MS.gene26101.t1	MTR_2g055970	21.827	197	131	7	42	233	268	446	5.64e-11	62.4
MS.gene26101.t1	MTR_5g096630	23.656	279	158	11	9	246	35	299	6.61e-11	62.0
MS.gene26101.t1	MTR_7g079370	27.485	171	97	6	77	233	80	237	7.04e-11	62.0
MS.gene26101.t1	MTR_1g054725	27.778	198	115	10	59	248	99	276	7.30e-11	62.0
MS.gene26101.t1	MTR_3g103020	30.000	180	104	6	59	233	95	257	9.35e-11	61.6
MS.gene26101.t1	MTR_4g102410	23.684	228	131	10	44	246	133	342	9.79e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26101.t1	AT3G06240	26.020	196	123	6	46	237	133	310	1.64e-14	72.8

Find 59 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATGGAAAGTGCGGAATTT+TGG	0.222712	5.4:+56573079	None:intergenic
GCCCAAGGGAGATAGCTTTC+TGG	0.304482	5.4:-56573246	MS.gene26101:CDS
ATCCCATTGTTAACTATCTC+TGG	0.352257	5.4:+56572833	None:intergenic
CCGACTGACAATCACGGCTT+TGG	0.371643	5.4:-56573157	MS.gene26101:CDS
CATCCTCCACTGCGACTTGT+TGG	0.372552	5.4:-56573404	MS.gene26101:CDS
TGGTTCCGAATTCTATTCAT+TGG	0.373212	5.4:-56572961	MS.gene26101:CDS
TCAATGCGGGTGGTTAGGTT+AGG	0.384640	5.4:+56573361	None:intergenic
TGTAGCACAGTAACAACTTT+CGG	0.386867	5.4:+56572929	None:intergenic
GAAGTTGTGAGAATCGATTA+AGG	0.402280	5.4:+56573465	None:intergenic
TGAGATTGATGTTGCGGGTT+TGG	0.412060	5.4:-56572793	MS.gene26101:CDS
GTAACGGCCTCCTATGCATC+TGG	0.426532	5.4:-56573285	MS.gene26101:CDS
AGAGTTCAATGCGGGTGGTT+AGG	0.429364	5.4:+56573356	None:intergenic
TGCTCTCGTGAACATGCTGT+TGG	0.433568	5.4:-56572989	MS.gene26101:CDS
CAAAGAATGTACGGTATACT+AGG	0.441953	5.4:+56573010	None:intergenic
CGTTGAAAATCTCTGATGTA+AGG	0.449881	5.4:+56572867	None:intergenic
ACTACCCAATGAATAGAATT+CGG	0.452487	5.4:+56572956	None:intergenic
ATCTGGAACAGCGCATCCTC+AGG	0.453519	5.4:-56573268	MS.gene26101:CDS
AGGAAGTTCTTTCCACGAGT+TGG	0.458276	5.4:+56573030	None:intergenic
GGTTCCGAATTCTATTCATT+GGG	0.464089	5.4:-56572960	MS.gene26101:CDS
GATAGATGAAACAGGCGATC+AGG	0.464122	5.4:+56573101	None:intergenic
TTCCAGAAAGCTATCTCCCT+TGG	0.464256	5.4:+56573244	None:intergenic
TTAGGTTAGGGAAATCAGTT+AGG	0.466993	5.4:+56573374	None:intergenic
TCCAGAAAGCTATCTCCCTT+GGG	0.468449	5.4:+56573245	None:intergenic
AGTCTTGAGATTGATGTTGC+GGG	0.476568	5.4:-56572798	MS.gene26101:CDS
CAATGCGGGTGGTTAGGTTA+GGG	0.482838	5.4:+56573362	None:intergenic
TGCTATTCCGGCATCATCAT+CGG	0.487303	5.4:-56573313	MS.gene26101:CDS
TTCCAGAGATAGTTAACAAT+GGG	0.491210	5.4:-56572835	MS.gene26101:CDS
TAGTCTTGAGATTGATGTTG+CGG	0.501149	5.4:-56572799	MS.gene26101:CDS
ATCATCATCGGTTCATGTAA+CGG	0.515543	5.4:-56573301	MS.gene26101:CDS
CGCTGTTCCAGATGCATAGG+AGG	0.523722	5.4:+56573278	None:intergenic
TAACAATGGGATCAACAGTC+AGG	0.526421	5.4:-56572822	MS.gene26101:CDS
ACAGCGCATCCTCAGGCCCA+AGG	0.527360	5.4:-56573261	MS.gene26101:CDS
AGCTATCTCCCTTGGGCCTG+AGG	0.530930	5.4:+56573252	None:intergenic
ATCAGATGTTTACGAATGCA+AGG	0.531061	5.4:+56573220	None:intergenic
ACAAGTCGCAGTGGAGGATG+AGG	0.547634	5.4:+56573407	None:intergenic
TGAAGAGATTCACCGCTGAA+TGG	0.548546	5.4:+56573062	None:intergenic
TTGTTAACTATCTCTGGAAG+AGG	0.557342	5.4:+56572839	None:intergenic
GCAAAATGTCTTCAAAGGAA+AGG	0.562983	5.4:+56573333	None:intergenic
GGCTTTCCGACTGACAATCA+CGG	0.563854	5.4:-56573163	MS.gene26101:CDS
GAATAGCAAAATGTCTTCAA+AGG	0.578195	5.4:+56573328	None:intergenic
ATGCGCTGTTCCAGATGCAT+AGG	0.580360	5.4:+56573275	None:intergenic
CAGCGCATCCTCAGGCCCAA+GGG	0.581489	5.4:-56573260	MS.gene26101:CDS
TTGTTACTGTGCTACACGAA+TGG	0.583228	5.4:-56572922	MS.gene26101:CDS
ACATGAACCGATGATGATGC+CGG	0.590052	5.4:+56573306	None:intergenic
CTTCCAGAGATAGTTAACAA+TGG	0.590304	5.4:-56572836	MS.gene26101:CDS
ATTCCGCACTTTCCATTCAG+CGG	0.597094	5.4:-56573074	MS.gene26101:CDS
AGGAAAGGAGAGTTCAATGC+GGG	0.600130	5.4:+56573348	None:intergenic
TATTTGTAATCCCTTGTGAA+CGG	0.608286	5.4:+56573127	None:intergenic
TCACGAGAGCAAAGAATGTA+CGG	0.610205	5.4:+56573001	None:intergenic
TCAGATGTTTACGAATGCAA+GGG	0.615712	5.4:+56573221	None:intergenic
CCAAAGCCGTGATTGTCAGT+CGG	0.631076	5.4:+56573157	None:intergenic
TCAGCTTAGAATCCAACTCG+TGG	0.634753	5.4:-56573042	MS.gene26101:CDS
TGTTAACTATCTCTGGAAGA+GGG	0.634979	5.4:+56572840	None:intergenic
AATCCAACAAGTCGCAGTGG+AGG	0.639968	5.4:+56573401	None:intergenic
AAAGGAGAGTTCAATGCGGG+TGG	0.649345	5.4:+56573351	None:intergenic
TCACCGCTGAATGGAAAGTG+CGG	0.658866	5.4:+56573071	None:intergenic
AGAAATCCAACAAGTCGCAG+TGG	0.679191	5.4:+56573398	None:intergenic
TTAAATGCAAGTATTAAACG+CGG	0.786455	5.4:+56572890	None:intergenic
AAGGAAAGGAGAGTTCAATG+CGG	0.797340	5.4:+56573347	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTAAATGCAAGTATTAAACG+CGG	+	chr5.4:56573429-56573448	None:intergenic	25.0%
	ACTACCCAATGAATAGAATT+CGG	+	chr5.4:56573363-56573382	None:intergenic	30.0%
	GAATAGCAAAATGTCTTCAA+AGG	+	chr5.4:56572991-56573010	None:intergenic	30.0%
	TATTTGTAATCCCTTGTGAA+CGG	+	chr5.4:56573192-56573211	None:intergenic	30.0%
	TTCCAGAGATAGTTAACAAT+GGG	-	chr5.4:56573481-56573500	MS.gene26101:CDS	30.0%
!	GAATTTTGGATAGATGAAAC+AGG	+	chr5.4:56573226-56573245	None:intergenic	30.0%
!	TGAAGTTGAGTGAATTTTTG+AGG	+	chr5.4:56572888-56572907	None:intergenic	30.0%
!!	CCTTTGATAGCTTTAAAAAG+TGG	+	chr5.4:56573135-56573154	None:intergenic	30.0%
!!	TTGATAGCTTTAAAAAGTGG+AGG	+	chr5.4:56573132-56573151	None:intergenic	30.0%
!!!	CCACTTTTTAAAGCTATCAA+AGG	-	chr5.4:56573132-56573151	MS.gene26101:CDS	30.0%
!!!	TTGAAGACATTTTGCTATTC+CGG	-	chr5.4:56572991-56573010	MS.gene26101:CDS	30.0%
	ATCAGATGTTTACGAATGCA+AGG	+	chr5.4:56573099-56573118	None:intergenic	35.0%
	ATCCCATTGTTAACTATCTC+TGG	+	chr5.4:56573486-56573505	None:intergenic	35.0%
	CAAAGAATGTACGGTATACT+AGG	+	chr5.4:56573309-56573328	None:intergenic	35.0%
	CGTTGAAAATCTCTGATGTA+AGG	+	chr5.4:56573452-56573471	None:intergenic	35.0%
	CTTCCAGAGATAGTTAACAA+TGG	-	chr5.4:56573480-56573499	MS.gene26101:CDS	35.0%
	GAAGTTGTGAGAATCGATTA+AGG	+	chr5.4:56572854-56572873	None:intergenic	35.0%
	GCAAAATGTCTTCAAAGGAA+AGG	+	chr5.4:56572986-56573005	None:intergenic	35.0%
	GGTTCCGAATTCTATTCATT+GGG	-	chr5.4:56573356-56573375	MS.gene26101:CDS	35.0%
	TCAGATGTTTACGAATGCAA+GGG	+	chr5.4:56573098-56573117	None:intergenic	35.0%
	TGGTTCCGAATTCTATTCAT+TGG	-	chr5.4:56573355-56573374	MS.gene26101:CDS	35.0%
	TGTAGCACAGTAACAACTTT+CGG	+	chr5.4:56573390-56573409	None:intergenic	35.0%
	TTAGGTTAGGGAAATCAGTT+AGG	+	chr5.4:56572945-56572964	None:intergenic	35.0%
!	CTTTAAAAAGTGGAGGTCTA+GGG	+	chr5.4:56573125-56573144	None:intergenic	35.0%
!	TACATCAGAGATTTTCAACG+AGG	-	chr5.4:56573452-56573471	MS.gene26101:CDS	35.0%
!	TAGTCTTGAGATTGATGTTG+CGG	-	chr5.4:56573517-56573536	MS.gene26101:CDS	35.0%
!	TGTTAACTATCTCTGGAAGA+GGG	+	chr5.4:56573479-56573498	None:intergenic	35.0%
!	TTGTTAACTATCTCTGGAAG+AGG	+	chr5.4:56573480-56573499	None:intergenic	35.0%
!!	ATCATCATCGGTTCATGTAA+CGG	-	chr5.4:56573015-56573034	MS.gene26101:CDS	35.0%
	AAGGAAAGGAGAGTTCAATG+CGG	+	chr5.4:56572972-56572991	None:intergenic	40.0%
	AGTCTTGAGATTGATGTTGC+GGG	-	chr5.4:56573518-56573537	MS.gene26101:CDS	40.0%
	TAACAATGGGATCAACAGTC+AGG	-	chr5.4:56573494-56573513	MS.gene26101:CDS	40.0%
	TCACGAGAGCAAAGAATGTA+CGG	+	chr5.4:56573318-56573337	None:intergenic	40.0%
	TTGTTACTGTGCTACACGAA+TGG	-	chr5.4:56573394-56573413	MS.gene26101:CDS	40.0%
!!	GAATGGAAAGTGCGGAATTT+TGG	+	chr5.4:56573240-56573259	None:intergenic	40.0%
!!	GCTTTAAAAAGTGGAGGTCT+AGG	+	chr5.4:56573126-56573145	None:intergenic	40.0%
!!!	TGAACATGCTGTTGGCTTTT+TGG	-	chr5.4:56573335-56573354	MS.gene26101:CDS	40.0%
!!!	TGGTTTTGATCCGTTCACAA+GGG	-	chr5.4:56573179-56573198	MS.gene26101:CDS	40.0%
!!!	TTGGTTTTGATCCGTTCACA+AGG	-	chr5.4:56573178-56573197	MS.gene26101:CDS	40.0%
	AGAAATCCAACAAGTCGCAG+TGG	+	chr5.4:56572921-56572940	None:intergenic	45.0%
	AGGAAAGGAGAGTTCAATGC+GGG	+	chr5.4:56572971-56572990	None:intergenic	45.0%
	AGGAAGTTCTTTCCACGAGT+TGG	+	chr5.4:56573289-56573308	None:intergenic	45.0%
	ATTCCGCACTTTCCATTCAG+CGG	-	chr5.4:56573242-56573261	MS.gene26101:CDS	45.0%
	GATAGATGAAACAGGCGATC+AGG	+	chr5.4:56573218-56573237	None:intergenic	45.0%
	TCAGCTTAGAATCCAACTCG+TGG	-	chr5.4:56573274-56573293	MS.gene26101:CDS	45.0%
	TCCAGAAAGCTATCTCCCTT+GGG	+	chr5.4:56573074-56573093	None:intergenic	45.0%
	TGAAGAGATTCACCGCTGAA+TGG	+	chr5.4:56573257-56573276	None:intergenic	45.0%
	TGAGATTGATGTTGCGGGTT+TGG	-	chr5.4:56573523-56573542	MS.gene26101:CDS	45.0%
	TGCTATTCCGGCATCATCAT+CGG	-	chr5.4:56573003-56573022	MS.gene26101:CDS	45.0%
	TTCCAGAAAGCTATCTCCCT+TGG	+	chr5.4:56573075-56573094	None:intergenic	45.0%
!	ACATGAACCGATGATGATGC+CGG	+	chr5.4:56573013-56573032	None:intergenic	45.0%
	AAAGGAGAGTTCAATGCGGG+TGG	+	chr5.4:56572968-56572987	None:intergenic	50.0%
	AATCCAACAAGTCGCAGTGG+AGG	+	chr5.4:56572918-56572937	None:intergenic	50.0%
	AGAGTTCAATGCGGGTGGTT+AGG	+	chr5.4:56572963-56572982	None:intergenic	50.0%
	ATGCGCTGTTCCAGATGCAT+AGG	+	chr5.4:56573044-56573063	None:intergenic	50.0%
	CAATGCGGGTGGTTAGGTTA+GGG	+	chr5.4:56572957-56572976	None:intergenic	50.0%
	CCAAAGCCGTGATTGTCAGT+CGG	+	chr5.4:56573162-56573181	None:intergenic	50.0%
	GGCTTTCCGACTGACAATCA+CGG	-	chr5.4:56573153-56573172	MS.gene26101:CDS	50.0%
	TCAATGCGGGTGGTTAGGTT+AGG	+	chr5.4:56572958-56572977	None:intergenic	50.0%
	TCACCGCTGAATGGAAAGTG+CGG	+	chr5.4:56573248-56573267	None:intergenic	50.0%
	TGCTCTCGTGAACATGCTGT+TGG	-	chr5.4:56573327-56573346	MS.gene26101:CDS	50.0%
	ACAAGTCGCAGTGGAGGATG+AGG	+	chr5.4:56572912-56572931	None:intergenic	55.0%
	CATCCTCCACTGCGACTTGT+TGG	-	chr5.4:56572912-56572931	MS.gene26101:CDS	55.0%
	CCGACTGACAATCACGGCTT+TGG	-	chr5.4:56573159-56573178	MS.gene26101:CDS	55.0%
	CGCTGTTCCAGATGCATAGG+AGG	+	chr5.4:56573041-56573060	None:intergenic	55.0%
	GCCCAAGGGAGATAGCTTTC+TGG	-	chr5.4:56573070-56573089	MS.gene26101:CDS	55.0%
	GTAACGGCCTCCTATGCATC+TGG	-	chr5.4:56573031-56573050	MS.gene26101:CDS	55.0%
!	ATCTGGAACAGCGCATCCTC+AGG	-	chr5.4:56573048-56573067	MS.gene26101:CDS	55.0%
	AGCTATCTCCCTTGGGCCTG+AGG	+	chr5.4:56573067-56573086	None:intergenic	60.0%
	ACAGCGCATCCTCAGGCCCA+AGG	-	chr5.4:56573055-56573074	MS.gene26101:CDS	65.0%
	CAGCGCATCCTCAGGCCCAA+GGG	-	chr5.4:56573056-56573075	MS.gene26101:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	56572790	56573548	56572790	ID=MS.gene26101
chr5.4	mRNA	56572790	56573548	56572790	ID=MS.gene26101.t1;Parent=MS.gene26101
chr5.4	exon	56572790	56573548	56572790	ID=MS.gene26101.t1.exon1;Parent=MS.gene26101.t1
chr5.4	CDS	56572790	56573548	56572790	ID=cds.MS.gene26101.t1;Parent=MS.gene26101.t1

Gene Sequence

>MS.gene26101

ATGATTGTTAGTATTATTAGTATTTTGAAGCTGATTTTCTTAACTTCAAAATCACTTAAATCCTTAATCGATTCTCACAACTTCATCAATCTTCACCTCAAAAATTCACTCAACTTCAACCTCATCCTCCACTGCGACTTGTTGGATTTCTACCTAACTGATTTCCCTAACCTAACCACCCGCATTGAACTCTCCTTTCCTTTGAAGACATTTTGCTATTCCGGCATCATCATCGGTTCATGTAACGGCCTCCTATGCATCTGGAACAGCGCATCCTCAGGCCCAAGGGAGATAGCTTTCTGGAACCCTTGCATTCGTAAACATCTGATTCTCCCTAGACCTCCACTTTTTAAAGCTATCAAAGGCTTTCCGACTGACAATCACGGCTTTGGTTTTGATCCGTTCACAAGGGATTACAAATATGTCCTGATCGCCTGTTTCATCTATCCAAAATTCCGCACTTTCCATTCAGCGGTGAATCTCTTCAGCTTAGAATCCAACTCGTGGAAAGAACTTCCTAGTATACCGTACATTCTTTGCTCTCGTGAACATGCTGTTGGCTTTTTGGTTCCGAATTCTATTCATTGGGTAGTTAATCCGAAAGTTGTTACTGTGCTACACGAATGGAAGTATCAGCCGCGTTTAATACTTGCATTTAACCTTACATCAGAGATTTTCAACGAGGTCCCTCTTCCAGAGATAGTTAACAATGGGATCAACAGTCAGGTAGTCTTGAGATTGATGTTGCGGGTTTGGTAG

Protein sequence

>MS.gene26101.t1

MIVSIISILKLIFLTSKSLKSLIDSHNFINLHLKNSLNFNLILHCDLLDFYLTDFPNLTTRIELSFPLKTFCYSGIIIGSCNGLLCIWNSASSGPREIAFWNPCIRKHLILPRPPLFKAIKGFPTDNHGFGFDPFTRDYKYVLIACFIYPKFRTFHSAVNLFSLESNSWKELPSIPYILCSREHAVGFLVPNSIHWVVNPKVVTVLHEWKYQPRLILAFNLTSEIFNEVPLPEIVNNGINSQVVLRLMLRVW