AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42444


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42444.t1 MTR_1g055135 64.770 369 113 9 2 357 6 370 1.94e-152 434
MS.gene42444.t1 MTR_1g055250 75.546 229 50 2 145 369 51 277 6.18e-118 345
MS.gene42444.t1 MTR_3g103020 55.989 359 143 9 8 356 19 372 4.20e-117 345
MS.gene42444.t1 MTR_1g055165 53.039 362 113 8 2 357 3 313 1.40e-114 336
MS.gene42444.t1 MTR_5g097210 53.117 369 156 11 8 367 8 368 2.05e-110 327
MS.gene42444.t1 MTR_4g117750 56.868 364 132 11 8 357 2 354 1.82e-109 329
MS.gene42444.t1 MTR_4g117750 45.736 129 59 3 240 357 350 478 5.35e-23 100
MS.gene42444.t1 MTR_4g117850 52.617 363 148 11 7 355 21 373 3.79e-107 319
MS.gene42444.t1 MTR_1g055195 60.135 296 94 10 73 357 191 473 1.41e-100 306
MS.gene42444.t1 MTR_3g034160 48.919 370 174 8 1 356 1 369 1.62e-100 302
MS.gene42444.t1 MTR_4g023080 48.476 361 166 9 1 355 1 347 2.31e-100 301
MS.gene42444.t1 MTR_3g034180 48.942 378 162 11 1 356 115 483 1.33e-99 304
MS.gene42444.t1 MTR_4g021785 48.760 363 163 11 1 355 1 348 3.79e-99 298
MS.gene42444.t1 MTR_5g070088 48.819 381 158 11 8 357 6 380 3.34e-97 294
MS.gene42444.t1 MTR_3g034130 49.162 358 154 9 1 338 1 350 1.61e-96 292
MS.gene42444.t1 MTR_4g023070 48.396 374 153 14 9 355 3 363 1.66e-96 292
MS.gene42444.t1 MTR_5g070080 47.927 386 166 10 1 357 1 380 1.10e-95 290
MS.gene42444.t1 MTR_4g116330 48.760 363 166 11 6 356 20 374 1.71e-95 290
MS.gene42444.t1 MTR_6g060650 51.459 377 154 12 1 357 1 368 2.09e-95 289
MS.gene42444.t1 MTR_4g122850 49.721 358 152 15 20 358 12 360 1.75e-94 287
MS.gene42444.t1 MTR_4g023090 45.989 374 169 12 7 356 14 378 1.77e-94 287
MS.gene42444.t1 MTR_4g117770 48.656 372 156 12 5 357 7 362 2.12e-94 286
MS.gene42444.t1 MTR_4g117810 48.656 372 156 12 5 357 7 362 2.12e-94 286
MS.gene42444.t1 MTR_5g070130 48.619 362 174 8 8 357 10 371 3.98e-94 286
MS.gene42444.t1 MTR_4g117780 48.370 368 163 12 5 357 7 362 9.28e-94 285
MS.gene42444.t1 MTR_4g109270 49.589 365 155 12 9 357 8 359 4.20e-93 283
MS.gene42444.t1 MTR_4g109280 50.693 361 150 13 8 355 7 352 2.20e-92 281
MS.gene42444.t1 MTR_4g117720 49.180 366 127 10 8 357 50 372 2.65e-92 281
MS.gene42444.t1 MTR_4g023120 47.059 374 158 14 9 355 3 363 2.82e-90 276
MS.gene42444.t1 MTR_4g023380 45.812 382 151 11 7 356 14 371 6.46e-90 275
MS.gene42444.t1 MTR_4g094365 47.826 368 157 14 8 356 7 358 1.76e-89 274
MS.gene42444.t1 MTR_4g023130 45.404 359 139 7 1 355 1 306 3.03e-88 269
MS.gene42444.t1 MTR_4g118380 49.176 364 149 10 1 336 1 356 4.58e-88 270
MS.gene42444.t1 MTR_4g023190 47.658 363 162 13 6 356 7 353 9.77e-88 269
MS.gene42444.t1 MTR_4g023150 47.383 363 164 12 6 356 7 354 2.13e-87 268
MS.gene42444.t1 MTR_8g433040 45.730 363 162 11 8 356 17 358 2.70e-85 263
MS.gene42444.t1 MTR_8g032380 45.730 363 162 11 8 356 17 358 2.70e-85 263
MS.gene42444.t1 MTR_4g023200 45.954 346 160 12 23 356 24 354 4.85e-85 262
MS.gene42444.t1 MTR_8g032390 46.260 361 152 12 8 356 39 369 2.30e-83 258
MS.gene42444.t1 MTR_4g023440 45.070 355 146 11 7 356 16 326 4.02e-82 254
MS.gene42444.t1 MTR_4g116330 44.475 362 144 11 6 356 20 335 9.88e-79 245
MS.gene42444.t1 MTR_1g055175 63.285 207 60 6 156 357 1 196 1.84e-77 237
MS.gene42444.t1 MTR_4g118370 55.328 244 83 7 119 357 33 255 3.88e-76 236
MS.gene42444.t1 MTR_8g433030 43.017 358 135 11 8 356 39 336 9.33e-72 227
MS.gene42444.t1 MTR_8g013010 47.940 267 119 8 8 264 53 309 1.05e-64 208
MS.gene42444.t1 MTR_4g121580 42.486 346 150 13 3 331 5 318 2.74e-60 199
MS.gene42444.t1 MTR_4g117870 42.000 300 125 9 67 357 3 262 1.17e-59 194
MS.gene42444.t1 MTR_7g079400 43.836 292 142 11 80 356 47 331 9.08e-59 194
MS.gene42444.t1 MTR_7g079370 41.056 341 173 13 38 356 16 350 1.39e-56 189
MS.gene42444.t1 MTR_2g048580 35.196 358 201 13 6 357 5 337 3.44e-56 187
MS.gene42444.t1 MTR_8g102520 38.378 370 149 17 8 357 7 317 7.48e-55 183
MS.gene42444.t1 MTR_4g118400 42.215 289 126 10 80 356 35 294 2.75e-53 178
MS.gene42444.t1 MTR_4g116320 50.000 218 94 7 148 357 43 253 4.21e-51 171
MS.gene42444.t1 MTR_8g040935 46.411 209 94 6 159 356 1 202 8.02e-48 161
MS.gene42444.t1 MTR_4g116340 43.103 232 99 6 3 223 30 239 2.13e-43 151
MS.gene42444.t1 MTR_6g463430 45.408 196 89 8 168 356 12 196 6.66e-38 135
MS.gene42444.t1 MTR_4g114700 38.462 260 97 8 107 353 9 218 3.42e-37 134
MS.gene42444.t1 MTR_4g117530 40.741 216 88 7 142 357 73 248 1.16e-35 130
MS.gene42444.t1 MTR_2g021150 30.871 379 213 17 5 354 10 368 6.00e-34 129
MS.gene42444.t1 MTR_7g079420 36.782 261 128 10 106 356 905 1138 1.19e-33 132
MS.gene42444.t1 MTR_7g117720 42.574 202 72 8 8 192 9 183 1.23e-32 123
MS.gene42444.t1 MTR_7g117720 49.425 87 38 2 277 357 186 272 2.35e-13 70.1
MS.gene42444.t1 MTR_3g014540 33.333 315 170 13 5 298 25 320 3.21e-31 122
MS.gene42444.t1 MTR_4g055060 30.915 317 186 11 2 298 23 326 6.71e-31 121
MS.gene42444.t1 MTR_1g094210 28.871 381 212 17 3 355 50 399 4.38e-30 119
MS.gene42444.t1 MTR_1g094210 29.211 380 210 17 3 354 50 398 5.10e-30 119
MS.gene42444.t1 MTR_4g107820 29.650 371 215 15 9 354 36 385 1.15e-29 118
MS.gene42444.t1 MTR_4g107780 29.650 371 215 15 9 354 36 385 1.15e-29 118
MS.gene42444.t1 MTR_4g107820 29.650 371 215 15 9 354 36 385 1.48e-29 118
MS.gene42444.t1 MTR_4g107780 29.650 371 215 15 9 354 36 385 2.08e-29 117
MS.gene42444.t1 MTR_3g036290 30.945 307 173 12 1 294 14 294 2.23e-29 116
MS.gene42444.t1 MTR_4g118360 58.491 106 37 4 255 356 18 120 2.29e-29 110
MS.gene42444.t1 MTR_3g006670 31.210 314 169 14 1 289 41 332 1.12e-28 115
MS.gene42444.t1 MTR_4g061340 31.090 312 176 9 5 294 22 316 1.29e-28 115
MS.gene42444.t1 MTR_1g097330 30.619 307 190 11 1 297 8 301 1.38e-28 115
MS.gene42444.t1 MTR_8g098830 36.041 197 116 7 172 365 35 224 1.42e-28 111
MS.gene42444.t1 MTR_3g013770 31.410 312 180 11 7 298 31 328 1.62e-28 115
MS.gene42444.t1 MTR_3g014570 33.542 319 162 17 5 297 25 319 1.70e-28 114
MS.gene42444.t1 MTR_5g069120 42.458 179 84 6 19 180 1 177 2.20e-28 109
MS.gene42444.t1 MTR_3g007360 31.579 323 175 16 12 311 55 354 2.47e-28 114
MS.gene42444.t1 MTR_3g007330 30.990 313 177 10 3 298 42 332 3.90e-28 114
MS.gene42444.t1 MTR_3g007410 31.288 326 172 16 12 311 55 354 2.68e-27 111
MS.gene42444.t1 MTR_1g055145 68.293 82 26 0 12 93 36 117 3.15e-27 109
MS.gene42444.t1 MTR_1g055145 51.087 92 42 3 196 286 118 207 1.56e-17 82.4
MS.gene42444.t1 MTR_1g050542 26.933 375 229 17 3 354 52 404 3.58e-27 111
MS.gene42444.t1 MTR_4g117430 41.317 167 72 7 107 264 3 152 6.12e-27 104
MS.gene42444.t1 MTR_5g057790 32.119 302 171 12 9 293 46 330 8.76e-27 110
MS.gene42444.t1 MTR_2g021210 32.313 294 171 13 6 289 81 356 9.71e-27 110
MS.gene42444.t1 MTR_2g046900 29.126 309 192 10 6 297 25 323 2.51e-26 108
MS.gene42444.t1 MTR_3g013740 31.230 317 174 14 6 293 41 342 2.85e-26 108
MS.gene42444.t1 MTR_2g028140 28.894 398 213 19 9 360 5 378 4.08e-26 108
MS.gene42444.t1 MTR_5g022420 26.273 373 236 12 4 354 22 377 5.55e-26 107
MS.gene42444.t1 MTR_3g011100 28.718 390 219 16 5 354 231 601 6.18e-26 109
MS.gene42444.t1 MTR_4g133170 26.284 331 199 12 9 315 4 313 1.42e-25 106
MS.gene42444.t1 MTR_4g109290 38.919 185 78 6 1 180 1 155 2.55e-25 101
MS.gene42444.t1 MTR_3g009310 30.380 316 172 15 7 298 40 331 3.52e-25 105
MS.gene42444.t1 MTR_4g108820 29.195 298 163 10 7 299 40 294 3.80e-25 104
MS.gene42444.t1 MTR_5g057020 31.818 286 168 11 9 288 46 310 4.56e-25 104
MS.gene42444.t1 MTR_3g036430 27.761 335 193 11 7 329 18 315 6.92e-25 103
MS.gene42444.t1 MTR_2g426020 27.083 336 198 12 9 312 6 326 7.98e-25 104
MS.gene42444.t1 MTR_3g007430 30.897 301 171 10 12 293 46 328 9.33e-25 104
MS.gene42444.t1 MTR_2g028130 28.406 345 193 15 9 312 5 336 1.23e-24 104
MS.gene42444.t1 MTR_7g066000 28.650 363 222 14 5 334 21 379 1.30e-24 104
MS.gene42444.t1 MTR_1g097560 28.418 373 219 16 2 354 29 373 1.48e-24 103
MS.gene42444.t1 MTR_5g007610 30.218 321 189 12 1 298 33 341 2.58e-24 103
MS.gene42444.t1 MTR_5g023000 56.180 89 37 1 271 357 6 94 3.30e-24 95.9
MS.gene42444.t1 MTR_1g068835 28.526 312 188 11 9 301 4 299 3.70e-24 102
MS.gene42444.t1 MTR_4g031770 29.276 304 178 12 9 293 4 289 6.62e-24 101
MS.gene42444.t1 MTR_3g007300 30.097 309 155 12 1 294 41 303 6.84e-24 101
MS.gene42444.t1 MTR_1g088120 26.344 372 212 12 1 320 1 362 6.98e-24 102
MS.gene42444.t1 MTR_5g057710 31.894 301 173 13 9 293 46 330 8.11e-24 102
MS.gene42444.t1 MTR_2g021190 28.226 372 225 16 7 354 19 372 9.75e-24 101
MS.gene42444.t1 MTR_2g021155 29.808 312 192 11 1 298 28 326 9.92e-24 103
MS.gene42444.t1 MTR_2g055970 28.495 372 224 12 6 354 208 560 1.11e-23 102
MS.gene42444.t1 MTR_1g068875 28.710 310 175 11 9 294 4 291 1.14e-23 101
MS.gene42444.t1 MTR_7g070440 28.443 334 184 15 4 300 2 317 1.29e-23 100
MS.gene42444.t1 MTR_6g053240 27.451 306 188 10 5 289 24 316 1.59e-23 101
MS.gene42444.t1 MTR_7g407070 30.211 331 178 13 5 298 28 342 2.28e-23 100
MS.gene42444.t1 MTR_8g101580 27.174 368 238 12 4 354 40 394 3.05e-23 100
MS.gene42444.t1 MTR_6g065980 27.221 349 209 13 5 334 12 334 3.55e-23 99.8
MS.gene42444.t1 MTR_3g009240 28.205 312 196 11 7 306 34 329 4.68e-23 99.8
MS.gene42444.t1 MTR_7g070830 27.596 337 186 11 9 294 21 350 5.55e-23 99.8
MS.gene42444.t1 MTR_7g055870 26.790 377 198 14 9 315 13 381 6.89e-23 99.8
MS.gene42444.t1 MTR_7g070880 26.870 361 204 13 9 315 21 375 8.56e-23 99.4
MS.gene42444.t1 MTR_5g011200 30.619 307 177 14 5 291 13 303 9.14e-23 98.6
MS.gene42444.t1 MTR_6g053260 28.664 307 174 11 7 289 335 620 1.02e-22 100
MS.gene42444.t1 MTR_1g097490 28.571 364 226 14 6 354 46 390 1.28e-22 98.6
MS.gene42444.t1 MTR_1g054575 28.205 312 185 15 3 297 46 335 1.38e-22 99.8
MS.gene42444.t1 MTR_2g426090 26.730 318 181 11 12 293 9 310 1.67e-22 98.2
MS.gene42444.t1 MTR_8g073550 33.673 196 116 5 1 185 22 214 1.76e-22 95.1
MS.gene42444.t1 MTR_7g079450 43.066 137 64 6 227 357 4 132 1.96e-22 92.0
MS.gene42444.t1 MTR_2g028160 28.448 348 191 16 9 312 5 338 2.14e-22 98.2
MS.gene42444.t1 MTR_3g072470 30.233 344 160 16 5 294 15 332 4.20e-22 97.1
MS.gene42444.t1 MTR_4g122860 34.000 200 87 11 177 368 157 319 4.40e-22 96.3
MS.gene42444.t1 MTR_4g122860 48.235 85 41 2 7 90 68 150 1.58e-11 65.1
MS.gene42444.t1 MTR_2g025420 26.361 349 201 12 9 312 6 343 4.76e-22 97.1
MS.gene42444.t1 MTR_2g021050 27.922 308 172 12 9 293 5 285 8.18e-22 95.9
MS.gene42444.t1 MTR_3g007270 28.049 328 182 13 7 302 45 350 1.16e-21 95.9
MS.gene42444.t1 MTR_1g055200 63.750 80 26 2 104 180 6 85 1.29e-21 89.0
MS.gene42444.t1 MTR_2g031720 27.476 313 180 13 9 293 6 299 1.31e-21 95.5
MS.gene42444.t1 MTR_4g129190 31.304 230 131 8 9 223 6 223 1.61e-21 95.1
MS.gene42444.t1 MTR_2g047832 28.125 320 193 13 6 297 26 336 1.68e-21 95.5
MS.gene42444.t1 MTR_7g060940 27.160 324 181 9 9 296 22 326 1.96e-21 95.1
MS.gene42444.t1 MTR_1g442850 27.129 317 177 11 8 289 4 301 1.97e-21 94.7
MS.gene42444.t1 MTR_2g046830 28.117 377 229 16 6 356 22 382 2.13e-21 95.1
MS.gene42444.t1 MTR_5g057690 29.592 294 179 11 9 293 46 320 2.19e-21 94.7
MS.gene42444.t1 MTR_2g078900 29.703 303 177 15 3 289 27 309 2.30e-21 94.4
MS.gene42444.t1 MTR_7g078860 27.410 332 191 10 1 294 1 320 2.48e-21 94.7
MS.gene42444.t1 MTR_0667s0010 27.114 343 196 15 6 312 3 327 4.95e-21 94.0
MS.gene42444.t1 MTR_4g037465 28.267 375 204 16 7 334 19 375 5.26e-21 94.0
MS.gene42444.t1 MTR_7g056820 25.745 369 216 13 7 335 5 355 5.91e-21 93.6
MS.gene42444.t1 MTR_5g096710 30.000 310 184 9 5 289 19 320 6.24e-21 93.6
MS.gene42444.t1 MTR_3g009260 28.846 312 175 14 7 298 39 323 6.62e-21 93.6
MS.gene42444.t1 MTR_7g055930 25.464 377 203 13 9 315 13 381 7.05e-21 93.6
MS.gene42444.t1 MTR_2g024110 25.066 379 238 15 9 356 4 367 8.19e-21 93.2
MS.gene42444.t1 MTR_2g426060 27.329 322 182 11 9 293 6 312 1.32e-20 92.8
MS.gene42444.t1 MTR_2g046920 29.032 310 183 12 6 297 21 311 1.49e-20 92.4
MS.gene42444.t1 MTR_3g083010 25.310 403 233 17 9 356 6 395 1.83e-20 92.4
MS.gene42444.t1 MTR_3g436150 29.851 335 180 15 1 300 24 338 2.24e-20 92.0
MS.gene42444.t1 MTR_4g013180 26.542 373 229 11 5 336 3 371 2.39e-20 92.4
MS.gene42444.t1 MTR_8g467140 29.260 311 185 12 8 300 31 324 2.56e-20 90.9
MS.gene42444.t1 MTR_3g058480 30.303 264 151 11 3 244 31 283 3.33e-20 90.5
MS.gene42444.t1 MTR_1g056710 30.645 310 173 13 5 293 30 318 3.60e-20 91.3
MS.gene42444.t1 MTR_3g010390 29.819 332 175 15 5 298 29 340 4.59e-20 91.3
MS.gene42444.t1 MTR_0128s0010 27.937 315 189 9 3 289 15 319 5.25e-20 90.9
MS.gene42444.t1 MTR_2g026010 29.545 308 180 11 9 293 4 297 5.31e-20 90.9
MS.gene42444.t1 MTR_0128s0020 27.171 357 202 11 1 315 10 350 6.58e-20 90.5
MS.gene42444.t1 MTR_0115s0020 28.662 314 188 16 9 289 10 320 6.73e-20 90.5
MS.gene42444.t1 MTR_3g058470 27.299 348 190 13 7 329 35 344 6.98e-20 90.5
MS.gene42444.t1 MTR_7g056290 30.240 334 174 12 5 294 18 336 7.91e-20 90.5
MS.gene42444.t1 MTR_2g426070 28.923 325 172 16 10 293 7 313 8.66e-20 90.5
MS.gene42444.t1 MTR_3g023930 27.609 297 167 13 7 289 32 294 9.05e-20 90.1
MS.gene42444.t1 MTR_6g048120 27.097 310 194 9 1 289 28 326 9.51e-20 90.1
MS.gene42444.t1 MTR_2g028110 28.296 311 180 12 9 293 4 297 9.89e-20 90.1
MS.gene42444.t1 MTR_7g077970 29.118 340 186 11 7 302 5 333 1.10e-19 90.1
MS.gene42444.t1 MTR_2g425980 27.596 337 177 13 9 300 5 319 1.18e-19 90.1
MS.gene42444.t1 MTR_6g055210 29.254 335 173 14 7 296 20 335 1.22e-19 90.1
MS.gene42444.t1 MTR_4g030830 26.873 387 213 16 1 334 1 370 1.27e-19 89.7
MS.gene42444.t1 MTR_7g057270 29.607 331 171 12 9 294 26 339 1.30e-19 90.1
MS.gene42444.t1 MTR_4g013185 28.148 405 211 18 1 336 1 394 1.40e-19 90.1
MS.gene42444.t1 MTR_0128s0070 28.818 347 200 12 5 315 18 353 1.97e-19 89.4
MS.gene42444.t1 MTR_7g066100 28.440 327 200 11 1 294 1 326 2.20e-19 89.0
MS.gene42444.t1 MTR_6g017280 27.273 352 195 16 9 315 9 344 2.27e-19 89.0
MS.gene42444.t1 MTR_1g068860 27.707 314 190 12 9 301 4 301 2.76e-19 88.6
MS.gene42444.t1 MTR_7g028660 27.019 322 191 11 5 294 6 315 2.94e-19 88.6
MS.gene42444.t1 MTR_3g083640 27.632 380 221 19 3 354 49 402 3.20e-19 88.6
MS.gene42444.t1 MTR_0242s0060 28.267 329 177 11 8 291 8 322 4.32e-19 88.6
MS.gene42444.t1 MTR_0242s0040 28.267 329 177 11 8 291 8 322 4.32e-19 88.6
MS.gene42444.t1 MTR_3g030250 24.932 369 232 13 7 354 35 379 4.73e-19 87.8
MS.gene42444.t1 MTR_4g028660 24.317 366 217 12 6 329 13 360 5.14e-19 88.2
MS.gene42444.t1 MTR_4g027450 24.317 366 217 12 6 329 13 360 5.14e-19 88.2
MS.gene42444.t1 MTR_3g024040 27.687 307 183 13 15 306 37 319 5.48e-19 87.8
MS.gene42444.t1 MTR_2g031680 25.895 363 217 14 6 341 3 340 7.56e-19 87.4
MS.gene42444.t1 MTR_4g023430 55.422 83 36 1 8 89 40 122 7.67e-19 84.7
MS.gene42444.t1 MTR_6g027910 28.756 386 209 18 12 354 12 374 1.15e-18 86.7
MS.gene42444.t1 MTR_2g046800 27.576 330 186 10 5 293 10 327 1.23e-18 87.0
MS.gene42444.t1 MTR_2g031640 26.225 347 216 12 9 331 6 336 1.25e-18 86.7
MS.gene42444.t1 MTR_2g029990 29.605 304 169 13 10 289 52 334 1.25e-18 87.0
MS.gene42444.t1 MTR_6g021880 26.510 298 175 11 20 289 31 312 1.39e-18 86.7
MS.gene42444.t1 MTR_8g062660 27.673 318 175 15 2 287 15 309 1.59e-18 87.4
MS.gene42444.t1 MTR_7g056390 29.940 334 175 13 5 294 14 332 1.99e-18 86.7
MS.gene42444.t1 MTR_5g046260 25.138 362 191 13 7 354 2 297 2.03e-18 85.1
MS.gene42444.t1 MTR_0044s0300 28.571 308 167 15 7 289 36 315 2.03e-18 86.3
MS.gene42444.t1 MTR_7g066850 24.868 378 227 16 3 335 17 382 2.56e-18 86.3
MS.gene42444.t1 MTR_1g114700 28.205 312 186 13 1 291 21 315 2.91e-18 85.9
MS.gene42444.t1 MTR_7g066030 25.205 365 222 11 8 329 20 376 2.92e-18 85.9
MS.gene42444.t1 MTR_3g010870 26.121 379 224 16 5 354 33 384 2.97e-18 85.9
MS.gene42444.t1 MTR_8g464770 28.527 319 185 15 6 293 9 315 5.42e-18 84.7
MS.gene42444.t1 MTR_3g030330 28.041 296 179 12 7 289 18 292 7.06e-18 84.3
MS.gene42444.t1 MTR_8g099460 26.269 335 199 12 9 312 5 322 8.53e-18 84.3
MS.gene42444.t1 MTR_5g069760 26.254 339 212 11 8 319 5 332 8.54e-18 84.3
MS.gene42444.t1 MTR_7g056503 26.016 369 235 14 2 336 13 377 1.08e-17 84.3
MS.gene42444.t1 MTR_5g057643 32.051 234 136 7 9 230 46 268 1.28e-17 82.4
MS.gene42444.t1 MTR_3g030310 25.407 307 186 12 7 289 19 306 1.35e-17 84.0
MS.gene42444.t1 MTR_3g010430 28.025 314 176 15 2 289 29 318 1.38e-17 84.0
MS.gene42444.t1 MTR_3g010920 28.425 292 173 13 7 289 42 306 1.46e-17 83.6
MS.gene42444.t1 MTR_7g061090 27.139 339 185 13 2 294 14 336 1.62e-17 83.6
MS.gene42444.t1 MTR_5g069930 25.556 360 220 13 8 331 5 352 1.88e-17 83.2
MS.gene42444.t1 MTR_7g077990 24.802 379 219 13 9 342 17 374 2.44e-17 83.2
MS.gene42444.t1 MTR_6g048140 29.245 318 173 11 1 289 29 323 2.73e-17 83.2
MS.gene42444.t1 MTR_6g080680 26.630 368 199 16 6 329 16 356 2.91e-17 82.8
MS.gene42444.t1 MTR_5g056020 26.923 338 182 15 6 289 14 340 3.27e-17 83.2
MS.gene42444.t1 MTR_7g055977 27.245 323 181 9 8 296 6 308 3.40e-17 82.4
MS.gene42444.t1 MTR_6g004660 26.214 309 196 9 9 294 16 315 4.23e-17 82.4
MS.gene42444.t1 MTR_3g010590 28.767 292 177 13 7 289 37 306 5.08e-17 82.0
MS.gene42444.t1 MTR_1g054725 26.769 325 164 15 5 289 16 306 5.31e-17 82.0
MS.gene42444.t1 MTR_7g078040 29.080 337 181 13 9 294 9 338 6.09e-17 82.0
MS.gene42444.t1 MTR_3g009250 31.004 229 121 10 7 220 39 245 6.40e-17 79.7
MS.gene42444.t1 MTR_4g013175 29.226 349 181 14 1 294 1 338 6.72e-17 82.0
MS.gene42444.t1 MTR_3g006500 26.710 307 184 12 7 293 15 300 8.06e-17 81.3
MS.gene42444.t1 MTR_0267s0050 26.330 376 213 14 6 334 4 362 8.11e-17 81.6
MS.gene42444.t1 MTR_7g061060 27.273 319 185 9 8 294 12 315 8.82e-17 81.6
MS.gene42444.t1 MTR_6g017270 31.863 204 118 10 1 185 1 202 1.00e-16 80.9
MS.gene42444.t1 MTR_7g061050 26.183 317 188 9 8 294 12 312 1.02e-16 81.3
MS.gene42444.t1 MTR_7g055987 28.977 352 175 17 5 313 16 335 1.03e-16 80.9
MS.gene42444.t1 MTR_6g016285 27.864 323 178 14 9 289 21 330 1.04e-16 81.6
MS.gene42444.t1 MTR_3g011060 28.829 333 169 17 1 293 20 324 1.11e-16 81.3
MS.gene42444.t1 MTR_7g007300 28.846 312 167 15 5 293 99 378 1.18e-16 81.3
MS.gene42444.t1 MTR_7g017170 29.217 332 171 17 9 293 18 332 1.36e-16 80.9
MS.gene42444.t1 MTR_7g017130 29.217 332 171 17 9 293 18 332 1.36e-16 80.9
MS.gene42444.t1 MTR_7g056760 31.818 242 129 11 5 218 19 252 1.51e-16 80.9
MS.gene42444.t1 MTR_3g030240 28.383 303 161 18 7 289 38 304 1.91e-16 80.5
MS.gene42444.t1 MTR_7g060960 29.221 308 156 10 9 294 32 299 2.02e-16 80.1
MS.gene42444.t1 MTR_7g052670 26.316 380 203 17 3 315 12 381 2.07e-16 80.5
MS.gene42444.t1 MTR_3g011650 31.034 232 121 11 7 220 74 284 2.13e-16 79.0
MS.gene42444.t1 MTR_7g062060 26.190 336 198 13 8 300 11 339 2.29e-16 80.1
MS.gene42444.t1 MTR_4g028680 26.048 334 192 13 6 294 13 336 2.58e-16 80.1
MS.gene42444.t1 MTR_7g056200 26.225 347 194 10 8 320 22 340 2.78e-16 79.7
MS.gene42444.t1 MTR_3g011020 29.283 321 170 17 3 298 22 310 3.11e-16 79.7
MS.gene42444.t1 MTR_7g062100 26.023 342 207 12 9 315 24 354 3.30e-16 79.7
MS.gene42444.t1 MTR_8g064890 28.797 316 180 16 8 289 15 319 3.54e-16 79.7
MS.gene42444.t1 MTR_5g023570 40.179 112 63 2 3 114 31 138 3.69e-16 75.1
MS.gene42444.t1 MTR_7g055850 29.224 219 111 8 9 187 13 227 3.91e-16 78.2
MS.gene42444.t1 MTR_2g021252 26.712 292 175 13 12 289 50 316 4.25e-16 79.3
MS.gene42444.t1 MTR_7g056570 25.750 400 222 17 5 357 14 385 4.92e-16 79.3
MS.gene42444.t1 MTR_7g022600 30.738 244 130 8 5 218 19 253 5.34e-16 79.3
MS.gene42444.t1 MTR_7g056710 24.859 354 191 14 8 315 17 341 5.82e-16 79.0
MS.gene42444.t1 MTR_7g077070 25.886 367 203 13 9 315 16 373 6.82e-16 79.0
MS.gene42444.t1 MTR_5g048160 27.003 337 190 19 9 297 4 332 8.07e-16 78.6
MS.gene42444.t1 MTR_1g115160 25.519 337 222 13 8 331 21 341 8.11e-16 78.6
MS.gene42444.t1 MTR_3g006530 25.649 308 183 14 7 289 38 324 9.28e-16 78.6
MS.gene42444.t1 MTR_0760s0010 27.835 291 173 12 14 290 52 319 9.37e-16 78.2
MS.gene42444.t1 MTR_3g058440 30.488 246 133 11 1 222 25 256 1.08e-15 77.4
MS.gene42444.t1 MTR_7g066010 24.207 347 186 11 8 315 20 328 1.12e-15 77.8
MS.gene42444.t1 MTR_3g024110 25.902 305 184 12 2 289 94 373 1.16e-15 78.6
MS.gene42444.t1 MTR_3g013950 26.542 373 207 14 12 334 9 364 1.20e-15 78.2
MS.gene42444.t1 MTR_7g078900 25.248 404 223 15 8 346 11 400 1.63e-15 77.8
MS.gene42444.t1 MTR_7g056170 24.866 374 184 15 8 315 74 416 1.64e-15 77.8
MS.gene42444.t1 MTR_7g091630 24.771 327 207 13 1 294 24 344 1.69e-15 77.8
MS.gene42444.t1 MTR_1g037540 27.513 378 220 19 6 334 2 374 1.71e-15 77.8
MS.gene42444.t1 MTR_2g024100 26.948 308 176 12 16 289 14 306 1.84e-15 77.4
MS.gene42444.t1 MTR_4g028750 27.273 330 189 14 2 289 9 329 2.10e-15 77.4
MS.gene42444.t1 MTR_1g055375 29.276 304 179 15 12 293 7 296 2.16e-15 77.0
MS.gene42444.t1 MTR_4g028510 24.796 367 211 14 9 329 16 363 2.47e-15 77.4
MS.gene42444.t1 MTR_0064s0160 25.309 324 190 13 8 289 41 354 2.61e-15 77.4
MS.gene42444.t1 MTR_7g016930 28.302 318 170 15 6 290 13 305 2.85e-15 76.3
MS.gene42444.t1 MTR_5g057040 33.862 189 108 7 9 185 46 229 3.10e-15 77.8
MS.gene42444.t1 MTR_1g071010 30.126 239 134 11 1 219 7 232 3.61e-15 76.6
MS.gene42444.t1 MTR_3g006570 25.321 312 185 12 2 289 14 301 3.67e-15 76.6
MS.gene42444.t1 MTR_7g067680 35.417 144 71 5 5 132 45 182 3.97e-15 76.6
MS.gene42444.t1 MTR_7g013590 29.773 309 175 16 12 297 39 328 4.36e-15 76.3
MS.gene42444.t1 MTR_7g050480 27.217 327 168 14 3 289 16 312 5.06e-15 76.3
MS.gene42444.t1 MTR_4g080200 26.136 352 206 16 9 335 3 325 5.11e-15 75.9
MS.gene42444.t1 MTR_5g097680 24.658 365 197 13 1 294 9 366 5.67e-15 76.3
MS.gene42444.t1 MTR_4g024890 22.903 310 208 8 8 294 9 310 6.39e-15 75.9
MS.gene42444.t1 MTR_2g078850 29.293 297 171 13 12 289 33 309 6.59e-15 75.5
MS.gene42444.t1 MTR_2g047892 30.705 241 131 12 5 225 17 241 6.66e-15 75.9
MS.gene42444.t1 MTR_4g030110 27.500 320 180 12 3 294 24 319 9.37e-15 75.5
MS.gene42444.t1 MTR_4g011660 32.227 211 100 11 5 185 15 212 1.05e-14 75.5
MS.gene42444.t1 MTR_3g010620 26.014 296 178 12 7 289 34 301 1.15e-14 75.1
MS.gene42444.t1 MTR_8g066440 25.377 398 234 19 6 355 20 402 1.18e-14 75.1
MS.gene42444.t1 MTR_1g055070 27.941 272 154 13 4 244 44 304 1.21e-14 75.1
MS.gene42444.t1 MTR_4g006270 26.510 298 167 13 9 287 4 268 1.24e-14 75.1
MS.gene42444.t1 MTR_2g437110 27.429 350 189 19 9 315 22 349 1.57e-14 75.1
MS.gene42444.t1 MTR_7g050490 32.487 197 109 8 3 185 2 188 2.25e-14 71.2
MS.gene42444.t1 MTR_6g079810 25.397 378 204 16 8 329 69 424 2.35e-14 74.3
MS.gene42444.t1 MTR_7g078840 26.801 347 183 15 8 294 9 344 2.36e-14 74.3
MS.gene42444.t1 MTR_0129s0070 26.400 375 197 17 6 327 14 362 2.61e-14 73.9
MS.gene42444.t1 MTR_7g056260 25.155 322 203 8 2 294 4 316 2.75e-14 73.2
MS.gene42444.t1 MTR_8g063440 26.801 347 205 17 2 314 5 336 2.79e-14 73.9
MS.gene42444.t1 MTR_7g050520 27.410 332 157 15 5 289 18 312 3.05e-14 73.9
MS.gene42444.t1 MTR_4g130330 27.300 337 187 16 4 294 2 326 3.06e-14 73.9
MS.gene42444.t1 MTR_3g010520 26.871 294 174 15 7 289 23 286 3.41e-14 73.6
MS.gene42444.t1 MTR_7g052150 26.019 319 187 9 9 296 22 322 3.97e-14 73.6
MS.gene42444.t1 MTR_4g033495 26.667 375 192 20 2 319 21 369 4.23e-14 73.6
MS.gene42444.t1 MTR_5g008530 66.667 57 17 1 9 65 18 72 5.22e-14 67.0
MS.gene42444.t1 MTR_1g058190 27.632 304 169 10 8 293 34 304 5.49e-14 72.8
MS.gene42444.t1 MTR_2g047200 25.234 321 190 13 5 289 15 321 5.90e-14 72.8
MS.gene42444.t1 MTR_7g061100 31.250 224 105 10 8 224 12 193 5.99e-14 72.4
MS.gene42444.t1 MTR_0097s0030 26.471 374 199 19 9 336 14 357 6.60e-14 72.8
MS.gene42444.t1 MTR_2g047240 26.471 374 199 19 9 336 14 357 6.60e-14 72.8
MS.gene42444.t1 MTR_6g092560 25.846 325 175 13 9 289 12 314 6.70e-14 73.2
MS.gene42444.t1 MTR_0464s0020 28.829 333 179 17 9 294 23 344 7.64e-14 72.8
MS.gene42444.t1 MTR_5g072060 26.627 338 201 15 8 314 5 326 8.06e-14 73.2
MS.gene42444.t1 MTR_7g445890 30.052 193 94 7 9 185 16 183 8.18e-14 72.4
MS.gene42444.t1 MTR_7g056797 33.498 203 109 8 5 185 19 217 8.60e-14 72.4
MS.gene42444.t1 MTR_7g066840 26.608 342 205 16 9 315 23 353 8.73e-14 72.4
MS.gene42444.t1 MTR_3g024150 26.263 297 178 12 12 289 38 312 8.80e-14 72.4
MS.gene42444.t1 MTR_3g036335 25.078 319 180 15 1 289 33 322 8.84e-14 72.4
MS.gene42444.t1 MTR_1g055055 25.566 309 169 15 9 295 26 295 9.32e-14 72.0
MS.gene42444.t1 MTR_2g043410 26.273 373 201 16 9 325 22 376 1.26e-13 72.0
MS.gene42444.t1 MTR_4g030090 27.273 308 191 13 9 289 14 315 1.69e-13 71.6
MS.gene42444.t1 MTR_7g069550 25.905 359 201 15 6 314 11 354 1.86e-13 71.6
MS.gene42444.t1 MTR_2g104340 26.055 403 226 16 8 358 13 395 1.92e-13 71.2
MS.gene42444.t1 MTR_3g010970 26.102 295 172 13 12 289 51 316 2.41e-13 71.2
MS.gene42444.t1 MTR_6g007135 25.566 309 192 15 9 293 26 320 3.20e-13 70.9
MS.gene42444.t1 MTR_6g034720 45.545 101 45 5 144 240 74 168 3.30e-13 68.6
MS.gene42444.t1 MTR_2g025960 26.339 224 126 9 100 293 1 215 3.78e-13 69.7
MS.gene42444.t1 MTR_2g006360 27.365 296 152 14 12 296 49 292 4.43e-13 70.1
MS.gene42444.t1 MTR_6g086825 23.797 374 212 15 8 329 69 421 4.49e-13 70.5
MS.gene42444.t1 MTR_7g056737 26.061 330 189 14 1 297 13 320 4.58e-13 70.5
MS.gene42444.t1 MTR_2g065840 25.633 316 193 12 8 289 11 318 5.48e-13 70.1
MS.gene42444.t1 MTR_1g112930 27.609 297 180 17 7 288 23 299 5.50e-13 70.1
MS.gene42444.t1 MTR_5g022090 26.562 320 176 13 9 306 34 316 5.50e-13 70.1
MS.gene42444.t1 MTR_0649s0020 25.197 381 218 15 9 341 11 372 5.77e-13 70.1
MS.gene42444.t1 MTR_7g079160 25.750 400 221 14 8 336 7 401 6.96e-13 70.1
MS.gene42444.t1 MTR_1g061330 25.325 308 183 10 9 289 4 291 7.50e-13 69.7
MS.gene42444.t1 MTR_7g056717 28.308 325 179 15 5 297 18 320 7.66e-13 69.7
MS.gene42444.t1 MTR_7g037670 30.500 200 92 7 6 185 20 192 8.90e-13 68.9
MS.gene42444.t1 MTR_1g015740 22.571 350 187 10 9 336 8 295 1.30e-12 68.6
MS.gene42444.t1 MTR_8g046310 25.798 376 237 15 8 356 15 375 1.52e-12 68.6
MS.gene42444.t1 MTR_4g014370 24.279 416 237 18 6 358 8 408 1.53e-12 68.6
MS.gene42444.t1 MTR_7g079640 25.989 354 205 14 8 327 12 342 1.90e-12 68.2
MS.gene42444.t1 MTR_2g031700 24.803 254 151 9 6 241 3 234 2.27e-12 67.4
MS.gene42444.t1 MTR_8g041270 25.245 408 232 19 8 358 14 405 3.22e-12 67.8
MS.gene42444.t1 MTR_7g017040 26.108 406 222 17 8 358 15 397 5.26e-12 67.0
MS.gene42444.t1 MTR_7g091640 24.620 329 205 14 1 296 27 345 5.71e-12 66.6
MS.gene42444.t1 MTR_3g007380 35.433 127 72 3 12 132 33 155 6.06e-12 65.1
MS.gene42444.t1 MTR_4g024870 25.498 251 161 8 10 242 45 287 6.55e-12 67.0
MS.gene42444.t1 MTR_6g461660 25.816 337 183 17 8 294 18 337 8.11e-12 66.6
MS.gene42444.t1 MTR_3g464470 24.606 317 197 10 6 294 4 306 8.65e-12 66.2
MS.gene42444.t1 MTR_5g097330 24.731 372 211 17 6 329 13 363 9.64e-12 66.2
MS.gene42444.t1 MTR_3g010870 27.347 245 134 11 5 230 33 252 1.09e-11 65.5
MS.gene42444.t1 MTR_3g010440 33.835 133 80 4 5 131 22 152 1.12e-11 65.9
MS.gene42444.t1 MTR_3g464500 24.528 318 199 9 6 294 24 329 1.23e-11 65.9
MS.gene42444.t1 MTR_6g004210 26.518 313 181 14 20 293 36 338 1.47e-11 65.9
MS.gene42444.t1 MTR_6g460450 37.838 111 61 3 9 112 29 138 1.76e-11 62.0
MS.gene42444.t1 MTR_2g022000 24.390 369 208 15 6 314 13 370 2.17e-11 65.5
MS.gene42444.t1 MTR_3g023940 24.595 370 239 13 7 354 32 383 2.39e-11 65.1
MS.gene42444.t1 MTR_3g030350 25.705 319 192 12 5 302 31 325 2.69e-11 64.7
MS.gene42444.t1 MTR_4g129160 25.683 366 200 15 6 312 4 356 2.88e-11 64.7
MS.gene42444.t1 MTR_3g024130 27.200 250 146 11 69 299 24 256 2.98e-11 64.3
MS.gene42444.t1 MTR_8g013005 58.491 53 20 2 306 356 1 53 3.11e-11 58.5
MS.gene42444.t1 MTR_7g061010 24.806 387 227 15 9 353 22 386 3.25e-11 64.7
MS.gene42444.t1 MTR_0129s0120 24.870 386 189 15 6 327 14 362 3.56e-11 64.3
MS.gene42444.t1 MTR_1g015730 25.373 335 166 15 8 294 8 306 4.21e-11 64.3
MS.gene42444.t1 MTR_7g066080 27.244 312 191 13 9 289 16 322 5.58e-11 63.9
MS.gene42444.t1 MTR_3g096250 31.792 173 93 8 7 162 45 209 5.69e-11 63.5
MS.gene42444.t1 MTR_5g096900 26.990 289 157 11 6 256 9 281 7.02e-11 63.2
MS.gene42444.t1 MTR_4g030760 28.283 198 126 6 6 192 70 262 7.70e-11 63.5
MS.gene42444.t1 MTR_6g013270 25.237 317 178 13 7 291 27 316 8.70e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42444.t1 AT3G23880 29.155 367 231 14 6 357 10 362 1.66e-26 108
MS.gene42444.t1 AT3G06240 26.216 370 205 12 9 327 36 388 4.72e-23 100
MS.gene42444.t1 AT5G49610 27.851 377 211 17 1 348 1 345 6.05e-21 93.2
MS.gene42444.t1 AT4G12560 28.527 319 183 14 9 297 4 307 8.61e-21 93.6
MS.gene42444.t1 AT4G12560 28.527 319 183 14 9 297 4 307 8.61e-21 93.6
MS.gene42444.t1 AT4G12560 28.527 319 183 14 9 297 4 307 8.61e-21 93.6
MS.gene42444.t1 AT1G33530 29.210 291 177 12 9 290 97 367 2.37e-20 92.4
MS.gene42444.t1 AT4G19930 25.069 363 220 12 4 333 38 381 1.42e-16 81.3
MS.gene42444.t1 AT1G30790 28.025 314 179 14 8 290 8 305 2.75e-16 80.1
MS.gene42444.t1 AT4G22390 24.233 326 210 11 10 310 5 318 3.38e-16 79.7
MS.gene42444.t1 AT4G22390 24.233 326 210 11 10 310 5 318 4.13e-16 79.7
MS.gene42444.t1 AT1G12870 22.955 379 234 13 6 347 30 387 4.27e-15 76.6
MS.gene42444.t1 AT2G21930 27.181 298 183 13 9 289 25 305 2.87e-14 73.9
MS.gene42444.t1 AT2G16810 26.641 259 149 10 8 245 40 278 1.49e-13 70.9
MS.gene42444.t1 AT2G40925 23.279 305 203 9 9 293 27 320 9.18e-13 69.3
MS.gene42444.t1 AT3G10430 28.070 228 142 9 9 228 5 218 1.65e-12 68.6
MS.gene42444.t1 AT3G17710 25.000 380 230 17 9 356 6 362 2.95e-12 67.8
MS.gene42444.t1 AT2G40910 23.602 322 186 14 9 294 62 359 5.21e-12 67.4
MS.gene42444.t1 AT2G40910 23.602 322 186 14 9 294 69 366 5.90e-12 67.0
MS.gene42444.t1 AT3G16590 28.041 296 165 17 9 279 5 277 7.82e-12 66.6
MS.gene42444.t1 AT2G40920 23.323 313 192 11 14 294 59 355 8.97e-12 66.6
MS.gene42444.t1 AT5G62060 25.407 307 170 13 9 306 33 289 1.00e-11 65.5
MS.gene42444.t1 AT1G70960 25.108 231 142 10 9 224 9 223 1.35e-11 65.9
MS.gene42444.t1 AT1G58090 27.055 292 180 15 6 280 3 278 1.51e-11 65.5
MS.gene42444.t1 AT3G21120 21.687 249 182 4 8 247 2 246 1.79e-11 65.5
MS.gene42444.t1 AT2G40920 23.473 311 190 11 16 294 2 296 1.88e-11 65.5
MS.gene42444.t1 AT3G08750 24.686 239 161 7 7 242 10 232 1.95e-11 65.1
MS.gene42444.t1 AT3G23260 25.161 310 198 13 9 303 6 296 6.47e-11 63.5
MS.gene42444.t1 AT1G47390 28.522 291 168 15 5 279 3 269 9.34e-11 63.2

Find 86 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGGTTTGTGAACAAAATT+AGG 0.062077 1.4:-46758232 None:intergenic
GTTCTACAGATTATGGTTTA+TGG 0.098610 1.4:+46758710 MS.gene42444:CDS
CGTTCAAATTTCTGTGGTTT+TGG 0.137814 1.4:+46758379 MS.gene42444:CDS
GATTTACCTATCAAAATTAT+AGG 0.250408 1.4:+46758253 MS.gene42444:CDS
ACAAATAGTGGTGATATTAT+TGG 0.256402 1.4:+46758889 MS.gene42444:CDS
CTGGTAATCTCAGTAGGATT+TGG 0.262165 1.4:-46758009 None:intergenic
GTGGTAGAGTTGGTCTTTAA+TGG 0.271046 1.4:+46758577 MS.gene42444:CDS
TTAGAGGATTTCTCAGTCTA+TGG 0.277856 1.4:+46758737 MS.gene42444:CDS
ACAAGGATAGAGTTGATATA+TGG 0.280423 1.4:+46758770 MS.gene42444:CDS
TTCTACAGATTATGGTTTAT+GGG 0.288441 1.4:+46758711 MS.gene42444:CDS
CCCATTTGTTGTACAAATAG+TGG 0.304476 1.4:+46758877 MS.gene42444:CDS
TAATCTTGCTCCCTGACATT+GGG 0.315684 1.4:-46759051 None:intergenic
CGTGAACAACCATCGTAATA+AGG 0.324730 1.4:-46758358 None:intergenic
ACCACTATTTGTACAACAAA+TGG 0.328724 1.4:-46758878 None:intergenic
TGGTAGAGTTGGTCTTTAAT+GGG 0.337388 1.4:+46758578 MS.gene42444:CDS
TGTTGCAGCCTTTCATTTAA+CGG 0.348165 1.4:+46758642 MS.gene42444:CDS
GAACAAAATTCAAAATCATT+TGG 0.352361 1.4:-46758691 None:intergenic
TATGGTTTATGGGTATTTAG+AGG 0.355913 1.4:+46758721 MS.gene42444:CDS
CTGGTTTGTGAACAAAATTA+GGG 0.366271 1.4:-46758231 None:intergenic
TGCTTTCACTCCCCAATGTC+AGG 0.367525 1.4:+46759040 MS.gene42444:CDS
AATACAAAGTGCAATCATAT+TGG 0.369394 1.4:+46758803 MS.gene42444:CDS
CCACTATTTGTACAACAAAT+GGG 0.379610 1.4:-46758877 None:intergenic
AATCGTATAAGAGACTTAAC+TGG 0.384411 1.4:-46758028 None:intergenic
GGATTCCATAGGTAAATGTT+TGG 0.387131 1.4:-46758310 None:intergenic
ATCATCTGAGTTTGGAATAT+AGG 0.390452 1.4:-46758443 None:intergenic
TGAACTTCGATCCATAGCTT+TGG 0.408425 1.4:+46758168 MS.gene42444:CDS
GATAGCACATCATCTGAGTT+TGG 0.409606 1.4:-46758451 None:intergenic
TGGTAATCTCAGTAGGATTT+GGG 0.410740 1.4:-46758008 None:intergenic
TCTTTAATGGGGCAATTCAT+TGG 0.417998 1.4:+46758590 MS.gene42444:CDS
GGACCTCACTACAAGGCAAA+TGG 0.427389 1.4:-46758531 None:intergenic
ATCAATTCATCGGGCAAATA+CGG 0.431910 1.4:-46757983 None:intergenic
GGGAGTGAAAGCATGACATT+GGG 0.444950 1.4:-46759030 None:intergenic
TTAATCTTGCTCCCTGACAT+TGG 0.446549 1.4:-46759052 None:intergenic
TAACGTAGGAGCAGAGTTAT+CGG 0.451174 1.4:-46758203 None:intergenic
TCTTGTTCTTAGCATCGATA+AGG 0.467300 1.4:+46758834 MS.gene42444:CDS
CAAGGATAGAGTTGATATAT+GGG 0.473734 1.4:+46758771 MS.gene42444:CDS
TTTCCTTTCCGTTAAATGAA+AGG 0.480038 1.4:-46758650 None:intergenic
GCGTGAACCTTTACAATAGT+AGG 0.488141 1.4:-46758971 None:intergenic
CTTATCCAAACATTTACCTA+TGG 0.489607 1.4:+46758305 MS.gene42444:CDS
TAGAGGATTTCTCAGTCTAT+GGG 0.489737 1.4:+46758738 MS.gene42444:CDS
TCAAATGCGTTTCCAAGTCA+TGG 0.490166 1.4:+46758050 MS.gene42444:CDS
TGATTATCCCGTGGTAGAGT+TGG 0.497238 1.4:+46758567 MS.gene42444:CDS
AAACAATGAATCCAAAGCTA+TGG 0.500070 1.4:-46758179 None:intergenic
CAGCCTTTCATTTAACGGAA+AGG 0.512645 1.4:+46758647 MS.gene42444:CDS
ATTGGAACAAGTTACCGTAC+TGG 0.520341 1.4:+46758907 MS.gene42444:CDS
GACCTCACTACAAGGCAAAT+GGG 0.520808 1.4:-46758530 None:intergenic
AGGTATTTGTTTGTGAACTC+CGG 0.522279 1.4:-46758338 None:intergenic
GATTTGGGTGATCAATTCAT+CGG 0.526910 1.4:-46757993 None:intergenic
ATTTGGGTGATCAATTCATC+GGG 0.529006 1.4:-46757992 None:intergenic
GAGCATACCTACTATTGTAA+AGG 0.535135 1.4:+46758964 MS.gene42444:CDS
TACCCATTTGCCTTGTAGTG+AGG 0.535942 1.4:+46758528 MS.gene42444:CDS
GGGGAGTGAAAGCATGACAT+TGG 0.538499 1.4:-46759031 None:intergenic
TGTAGTGAGGTCCCGTCTTG+TGG 0.538651 1.4:+46758541 MS.gene42444:CDS
CAGAGGAAGACGCATGGATG+CGG 0.538930 1.4:+46757952 None:intergenic
AAAATTATAGGTTCATGTAG+AGG 0.543548 1.4:+46758265 MS.gene42444:CDS
TGAGTCAAAAGACGATTACT+TGG 0.549837 1.4:+46758408 MS.gene42444:CDS
AAATTATAGGTTCATGTAGA+GGG 0.550046 1.4:+46758266 MS.gene42444:CDS
AATCTTGCTCCCTGACATTG+GGG 0.556246 1.4:-46759050 None:intergenic
CACTATTTGTACAACAAATG+GGG 0.558396 1.4:-46758876 None:intergenic
CAAGACGGGACCTCACTACA+AGG 0.566824 1.4:-46758538 None:intergenic
ACTTAACTGGTAATCTCAGT+AGG 0.567953 1.4:-46758015 None:intergenic
GATAATCAGAACCACAAGAC+GGG 0.572925 1.4:-46758552 None:intergenic
GGGGAGTGAAAGCAGAGACT+TGG 0.573165 1.4:-46759010 None:intergenic
TGTTTGTGAACTCCGGTGGA+TGG 0.577672 1.4:-46758331 None:intergenic
TCATCGGGCAAATACGGTGA+TGG 0.577960 1.4:-46757977 None:intergenic
TTGATTAGATATGATGACAA+AGG 0.578290 1.4:+46758931 MS.gene42444:CDS
AATAAGAGAAAACCATGACT+TGG 0.585230 1.4:-46758062 None:intergenic
TGTTCACGTTCAAATTTCTG+TGG 0.587620 1.4:+46758373 MS.gene42444:CDS
CATATCTAATCAATCCAGTA+CGG 0.589365 1.4:-46758921 None:intergenic
TACCTATGGAATCCATCCAC+CGG 0.599416 1.4:+46758319 MS.gene42444:CDS
TCACTACAAGGCAAATGGGT+AGG 0.606362 1.4:-46758526 None:intergenic
TTAAAGACCAACTCTACCAC+GGG 0.607509 1.4:-46758574 None:intergenic
AAACAAATACCTTATTACGA+TGG 0.613721 1.4:+46758349 MS.gene42444:CDS
ATGATGTGCTATCTCGCTTG+AGG 0.618114 1.4:+46758461 MS.gene42444:CDS
GCTTTCACTCCCCAATGTCA+GGG 0.626091 1.4:+46759041 MS.gene42444:CDS
AAATTAGGGTTCAGTAACGT+AGG 0.627217 1.4:-46758217 None:intergenic
GGTAGAGTTGGTCTTTAATG+GGG 0.628290 1.4:+46758579 MS.gene42444:CDS
TCTCATTGAGAGGTAATGCG+TGG 0.629762 1.4:+46758488 MS.gene42444:CDS
ACTATTTGTACAACAAATGG+GGG 0.633848 1.4:-46758875 None:intergenic
TTGTGGTTCTGATTATCCCG+TGG 0.639393 1.4:+46758558 MS.gene42444:CDS
TATTTGTTTGTGAACTCCGG+TGG 0.640963 1.4:-46758335 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.641792 1.4:-46758321 None:intergenic
GGATAATCAGAACCACAAGA+CGG 0.644995 1.4:-46758553 None:intergenic
ATTAAAGACCAACTCTACCA+CGG 0.648500 1.4:-46758575 None:intergenic
ACTTGGTATAAATAGACACA+TGG 0.714135 1.4:-46758993 None:intergenic
GGAGTGAAAGCATGACATTG+GGG 0.729495 1.4:-46759029 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAACAAAATTCAAAATCATT+TGG - chr1.4:46758694-46758713 None:intergenic 20.0%
!! GATTTACCTATCAAAATTAT+AGG + chr1.4:46758253-46758272 MS.gene42444:CDS 20.0%
!!! ATAATTTTGATAGGTAAATC+TGG - chr1.4:46758253-46758272 None:intergenic 20.0%
! AAAATTATAGGTTCATGTAG+AGG + chr1.4:46758265-46758284 MS.gene42444:CDS 25.0%
! AAACAAATACCTTATTACGA+TGG + chr1.4:46758349-46758368 MS.gene42444:CDS 25.0%
! AAATTATAGGTTCATGTAGA+GGG + chr1.4:46758266-46758285 MS.gene42444:CDS 25.0%
! AATACAAAGTGCAATCATAT+TGG + chr1.4:46758803-46758822 MS.gene42444:CDS 25.0%
! ACAAATAGTGGTGATATTAT+TGG + chr1.4:46758889-46758908 MS.gene42444:CDS 25.0%
! TTCTACAGATTATGGTTTAT+GGG + chr1.4:46758711-46758730 MS.gene42444:CDS 25.0%
! TTGATTAGATATGATGACAA+AGG + chr1.4:46758931-46758950 MS.gene42444:CDS 25.0%
!! GAATTTTGTTCTACAGATTA+TGG + chr1.4:46758703-46758722 MS.gene42444:CDS 25.0%
!!! CATGAACCTATAATTTTGAT+AGG - chr1.4:46758262-46758281 None:intergenic 25.0%
AAACAATGAATCCAAAGCTA+TGG - chr1.4:46758182-46758201 None:intergenic 30.0%
AATAAGAGAAAACCATGACT+TGG - chr1.4:46758065-46758084 None:intergenic 30.0%
AATCGTATAAGAGACTTAAC+TGG - chr1.4:46758031-46758050 None:intergenic 30.0%
ACCACTATTTGTACAACAAA+TGG - chr1.4:46758881-46758900 None:intergenic 30.0%
ACTATTTGTACAACAAATGG+GGG - chr1.4:46758878-46758897 None:intergenic 30.0%
ACTTGGTATAAATAGACACA+TGG - chr1.4:46758996-46759015 None:intergenic 30.0%
CACTATTTGTACAACAAATG+GGG - chr1.4:46758879-46758898 None:intergenic 30.0%
CATATCTAATCAATCCAGTA+CGG - chr1.4:46758924-46758943 None:intergenic 30.0%
CCACTATTTGTACAACAAAT+GGG - chr1.4:46758880-46758899 None:intergenic 30.0%
CTTATCCAAACATTTACCTA+TGG + chr1.4:46758305-46758324 MS.gene42444:CDS 30.0%
GTTCTACAGATTATGGTTTA+TGG + chr1.4:46758710-46758729 MS.gene42444:CDS 30.0%
TATGGTTTATGGGTATTTAG+AGG + chr1.4:46758721-46758740 MS.gene42444:CDS 30.0%
TTTCCTTTCCGTTAAATGAA+AGG - chr1.4:46758653-46758672 None:intergenic 30.0%
! ATCATCTGAGTTTGGAATAT+AGG - chr1.4:46758446-46758465 None:intergenic 30.0%
! CTGGTTTGTGAACAAAATTA+GGG - chr1.4:46758234-46758253 None:intergenic 30.0%
! GTTCAAATTTCTGTGGTTTT+GGG + chr1.4:46758380-46758399 MS.gene42444:CDS 30.0%
! TCTGGTTTGTGAACAAAATT+AGG - chr1.4:46758235-46758254 None:intergenic 30.0%
!! ACAAGGATAGAGTTGATATA+TGG + chr1.4:46758770-46758789 MS.gene42444:CDS 30.0%
!! CAAGGATAGAGTTGATATAT+GGG + chr1.4:46758771-46758790 MS.gene42444:CDS 30.0%
AAATTAGGGTTCAGTAACGT+AGG - chr1.4:46758220-46758239 None:intergenic 35.0%
ACTTAACTGGTAATCTCAGT+AGG - chr1.4:46758018-46758037 None:intergenic 35.0%
AGGTATTTGTTTGTGAACTC+CGG - chr1.4:46758341-46758360 None:intergenic 35.0%
ATCAATTCATCGGGCAAATA+CGG - chr1.4:46757986-46758005 None:intergenic 35.0%
ATTAAAGACCAACTCTACCA+CGG - chr1.4:46758578-46758597 None:intergenic 35.0%
ATTTGGGTGATCAATTCATC+GGG - chr1.4:46757995-46758014 None:intergenic 35.0%
GAGCATACCTACTATTGTAA+AGG + chr1.4:46758964-46758983 MS.gene42444:CDS 35.0%
GATTTGGGTGATCAATTCAT+CGG - chr1.4:46757996-46758015 None:intergenic 35.0%
GGATTCCATAGGTAAATGTT+TGG - chr1.4:46758313-46758332 None:intergenic 35.0%
TAGAGGATTTCTCAGTCTAT+GGG + chr1.4:46758738-46758757 MS.gene42444:CDS 35.0%
TCTTTAATGGGGCAATTCAT+TGG + chr1.4:46758590-46758609 MS.gene42444:CDS 35.0%
TGAGTCAAAAGACGATTACT+TGG + chr1.4:46758408-46758427 MS.gene42444:CDS 35.0%
TGGTAATCTCAGTAGGATTT+GGG - chr1.4:46758011-46758030 None:intergenic 35.0%
TGTTCACGTTCAAATTTCTG+TGG + chr1.4:46758373-46758392 MS.gene42444:CDS 35.0%
TGTTGCAGCCTTTCATTTAA+CGG + chr1.4:46758642-46758661 MS.gene42444:CDS 35.0%
TTAGAGGATTTCTCAGTCTA+TGG + chr1.4:46758737-46758756 MS.gene42444:CDS 35.0%
! CGTTCAAATTTCTGTGGTTT+TGG + chr1.4:46758379-46758398 MS.gene42444:CDS 35.0%
! TTGAGGATTTTCTCATTGAG+AGG + chr1.4:46758478-46758497 MS.gene42444:CDS 35.0%
!! CCCATTTGTTGTACAAATAG+TGG + chr1.4:46758877-46758896 MS.gene42444:CDS 35.0%
!! TCTTGTTCTTAGCATCGATA+AGG + chr1.4:46758834-46758853 MS.gene42444:CDS 35.0%
!! TGGTAGAGTTGGTCTTTAAT+GGG + chr1.4:46758578-46758597 MS.gene42444:CDS 35.0%
!! TTAGCTTTTCGTGATGAGAT+AGG + chr1.4:46758613-46758632 MS.gene42444:CDS 35.0%
ATTGGAACAAGTTACCGTAC+TGG + chr1.4:46758907-46758926 MS.gene42444:CDS 40.0%
CAGCCTTTCATTTAACGGAA+AGG + chr1.4:46758647-46758666 MS.gene42444:CDS 40.0%
CGTGAACAACCATCGTAATA+AGG - chr1.4:46758361-46758380 None:intergenic 40.0%
CTGGTAATCTCAGTAGGATT+TGG - chr1.4:46758012-46758031 None:intergenic 40.0%
GATAATCAGAACCACAAGAC+GGG - chr1.4:46758555-46758574 None:intergenic 40.0%
GATAGCACATCATCTGAGTT+TGG - chr1.4:46758454-46758473 None:intergenic 40.0%
GCGTGAACCTTTACAATAGT+AGG - chr1.4:46758974-46758993 None:intergenic 40.0%
GGATAATCAGAACCACAAGA+CGG - chr1.4:46758556-46758575 None:intergenic 40.0%
TAACGTAGGAGCAGAGTTAT+CGG - chr1.4:46758206-46758225 None:intergenic 40.0%
TAATCTTGCTCCCTGACATT+GGG - chr1.4:46759054-46759073 None:intergenic 40.0%
TATTTGTTTGTGAACTCCGG+TGG - chr1.4:46758338-46758357 None:intergenic 40.0%
TCAAATGCGTTTCCAAGTCA+TGG + chr1.4:46758050-46758069 MS.gene42444:CDS 40.0%
TGAACTTCGATCCATAGCTT+TGG + chr1.4:46758168-46758187 MS.gene42444:CDS 40.0%
TTAAAGACCAACTCTACCAC+GGG - chr1.4:46758577-46758596 None:intergenic 40.0%
TTAATCTTGCTCCCTGACAT+TGG - chr1.4:46759055-46759074 None:intergenic 40.0%
! TTCTCAGTCTATGGGTTTTG+AGG + chr1.4:46758746-46758765 MS.gene42444:CDS 40.0%
!! GGTAGAGTTGGTCTTTAATG+GGG + chr1.4:46758579-46758598 MS.gene42444:CDS 40.0%
!! GTGGTAGAGTTGGTCTTTAA+TGG + chr1.4:46758577-46758596 MS.gene42444:CDS 40.0%
!!! TCTATGGGTTTTGAGGTACA+AGG + chr1.4:46758753-46758772 MS.gene42444:CDS 40.0%
AATCTTGCTCCCTGACATTG+GGG - chr1.4:46759053-46759072 None:intergenic 45.0%
ATGATGTGCTATCTCGCTTG+AGG + chr1.4:46758461-46758480 MS.gene42444:CDS 45.0%
GACCTCACTACAAGGCAAAT+GGG - chr1.4:46758533-46758552 None:intergenic 45.0%
TACCCATTTGCCTTGTAGTG+AGG + chr1.4:46758528-46758547 MS.gene42444:CDS 45.0%
TACCTATGGAATCCATCCAC+CGG + chr1.4:46758319-46758338 MS.gene42444:CDS 45.0%
TCACTACAAGGCAAATGGGT+AGG - chr1.4:46758529-46758548 None:intergenic 45.0%
TCTCATTGAGAGGTAATGCG+TGG + chr1.4:46758488-46758507 MS.gene42444:CDS 45.0%
TGATTATCCCGTGGTAGAGT+TGG + chr1.4:46758567-46758586 MS.gene42444:CDS 45.0%
! GGAGTGAAAGCATGACATTG+GGG - chr1.4:46759032-46759051 None:intergenic 45.0%
! GGGAGTGAAAGCATGACATT+GGG - chr1.4:46759033-46759052 None:intergenic 45.0%
!! TTGTGGTTCTGATTATCCCG+TGG + chr1.4:46758558-46758577 MS.gene42444:CDS 45.0%
AATGGGGGAAATGCGAGGAA+TGG - chr1.4:46758863-46758882 None:intergenic 50.0%
CAACAAATGGGGGAAATGCG+AGG - chr1.4:46758868-46758887 None:intergenic 50.0%
GCTTTCACTCCCCAATGTCA+GGG + chr1.4:46759020-46759039 MS.gene42444:CDS 50.0%
GGACCTCACTACAAGGCAAA+TGG - chr1.4:46758534-46758553 None:intergenic 50.0%
TCATCGGGCAAATACGGTGA+TGG - chr1.4:46757980-46757999 None:intergenic 50.0%
TGCTTTCACTCCCCAATGTC+AGG + chr1.4:46759019-46759038 MS.gene42444:CDS 50.0%
TGTTTGTGAACTCCGGTGGA+TGG - chr1.4:46758334-46758353 None:intergenic 50.0%
! GGGGAGTGAAAGCATGACAT+TGG - chr1.4:46759034-46759053 None:intergenic 50.0%
CAAGACGGGACCTCACTACA+AGG - chr1.4:46758541-46758560 None:intergenic 55.0%
GGGGAGTGAAAGCAGAGACT+TGG - chr1.4:46759013-46759032 None:intergenic 55.0%
TGTAGTGAGGTCCCGTCTTG+TGG + chr1.4:46758541-46758560 MS.gene42444:CDS 55.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr1.4:46758324-46758343 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 46757965 46759074 46757965 ID=MS.gene42444
chr1.4 mRNA 46757965 46759074 46757965 ID=MS.gene42444.t1;Parent=MS.gene42444
chr1.4 exon 46757965 46759074 46757965 ID=MS.gene42444.t1.exon1;Parent=MS.gene42444.t1
chr1.4 CDS 46757965 46759074 46757965 ID=cds.MS.gene42444.t1;Parent=MS.gene42444.t1
Gene Sequence

>MS.gene42444

ATGGATGCGGATCCATCACCGTATTTGCCCGATGAATTGATCACCCAAATCCTACTGAGATTACCAGTTAAGTCTCTTATACGATTCAAATGCGTTTCCAAGTCATGGTTTTCTCTTATTTCAAATGCTAGTTTTGCAAGTTCACAGTTTCAGATTACTGCTGCAACACACACTCGTAGAATTCTGTTCATAACAGAAACTTCTGAACTTCGATCCATAGCTTTGGATTCATTGTTTACCGATAACTCTGCTCCTACGTTACTGAACCCTAATTTTGTTCACAAACCAGATTTACCTATCAAAATTATAGGTTCATGTAGAGGGTTCATATTTTTGTACTCTTATCCAAACATTTACCTATGGAATCCATCCACCGGAGTTCACAAACAAATACCTTATTACGATGGTTGTTCACGTTCAAATTTCTGTGGTTTTGGGTATGATGAGTCAAAAGACGATTACTTGGTAGTTTTAGTATCCTATATTCCAAACTCAGATGATGTGCTATCTCGCTTGAGGATTTTCTCATTGAGAGGTAATGCGTGGAACGAAATTGTGAGTCCTACCCATTTGCCTTGTAGTGAGGTCCCGTCTTGTGGTTCTGATTATCCCGTGGTAGAGTTGGTCTTTAATGGGGCAATTCATTGGTTAGCTTTTCGTGATGAGATAGGTTTCTTTGTTGCAGCCTTTCATTTAACGGAAAGGAAACTTCTAGAGATTTCTCTTCCAAATGATTTTGAATTTTGTTCTACAGATTATGGTTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTTGAGGTACAAGGATAGAGTTGATATATGGGTGATGAAAGAATACAAAGTGCAATCATATTGGACTAAAACTCTTGTTCTTAGCATCGATAAGGATACCATTCCTCGCATTTCCCCCATTTGTTGTACAAATAGTGGTGATATTATTGGAACAAGTTACCGTACTGGATTGATTAGATATGATGACAAAGGAGATTTTCTAGAGCATACCTACTATTGTAAAGGTTCACGCCATGTGTCTATTTATACCAAGTCTCTGCTTTCACTCCCCAATGTCATGCTTTCACTCCCCAATGTCAGGGAGCAAGATTAA

Protein sequence

>MS.gene42444.t1

MDADPSPYLPDELITQILLRLPVKSLIRFKCVSKSWFSLISNASFASSQFQITAATHTRRILFITETSELRSIALDSLFTDNSAPTLLNPNFVHKPDLPIKIIGSCRGFIFLYSYPNIYLWNPSTGVHKQIPYYDGCSRSNFCGFGYDESKDDYLVVLVSYIPNSDDVLSRLRIFSLRGNAWNEIVSPTHLPCSEVPSCGSDYPVVELVFNGAIHWLAFRDEIGFFVAAFHLTERKLLEISLPNDFEFCSTDYGLWVFRGFLSLWVLRYKDRVDIWVMKEYKVQSYWTKTLVLSIDKDTIPRISPICCTNSGDIIGTSYRTGLIRYDDKGDFLEHTYYCKGSRHVSIYTKSLLSLPNVMLSLPNVREQD