AlfalfaGEDB | MS.gene036556

M. sativa cultivar XinJiangDaYe / MS.gene036556

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene036556.t1	AET00901.2	68.7	131	40	1	5	134	227	357	8.20E-45	189.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene036556.t1	G7KEM6	68.7	131	40	1	5	134	227	357	5.9e-45	189.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene060370	MS.gene036556	PPI
MS.gene64001	MS.gene036556	PPI
MS.gene036556	MS.gene070462	PPI
MS.gene57533	MS.gene036556	PPI
MS.gene036556	MS.gene061240	PPI
MS.gene032970	MS.gene036556	PPI
MS.gene036556	MS.gene041473	PPI
MS.gene87586	MS.gene036556	PPI
MS.gene77856	MS.gene036556	PPI
MS.gene036556	MS.gene064086	PPI
MS.gene036556	MS.gene035234	PPI
MS.gene036556	MS.gene058989	PPI
MS.gene40887	MS.gene036556	PPI
MS.gene50339	MS.gene036556	PPI
MS.gene036556	MS.gene041468	PPI
MS.gene046958	MS.gene036556	PPI
MS.gene034688	MS.gene036556	PPI
MS.gene060366	MS.gene036556	PPI
MS.gene036556	MS.gene42447	PPI
MS.gene036556	MS.gene51189	PPI
MS.gene57529	MS.gene036556	PPI
MS.gene036556	MS.gene044425	PPI
MS.gene40886	MS.gene036556	PPI
MS.gene40902	MS.gene036556	PPI
MS.gene036556	MS.gene59637	PPI
MS.gene27051	MS.gene036556	PPI
MS.gene036556	MS.gene27022	PPI
MS.gene060368	MS.gene036556	PPI
MS.gene033875	MS.gene036556	PPI
MS.gene27020	MS.gene036556	PPI
MS.gene066620	MS.gene036556	PPI
MS.gene035236	MS.gene036556	PPI
MS.gene036556	MS.gene87585	PPI
MS.gene036556	MS.gene023999	PPI
MS.gene036556	MS.gene024009	PPI
MS.gene036556	MS.gene036599	PPI
MS.gene059157	MS.gene036556	PPI
MS.gene58781	MS.gene036556	PPI
MS.gene028390	MS.gene036556	PPI
MS.gene011106	MS.gene036556	PPI
MS.gene033440	MS.gene036556	PPI
MS.gene62398	MS.gene036556	PPI
MS.gene036556	MS.gene006705	PPI
MS.gene60027	MS.gene036556	PPI
MS.gene045475	MS.gene036556	PPI
MS.gene036556	MS.gene035237	PPI
MS.gene038756	MS.gene036556	PPI
MS.gene88776	MS.gene036556	PPI
MS.gene35068	MS.gene036556	PPI
MS.gene041390	MS.gene036556	PPI
MS.gene24286	MS.gene036556	PPI
MS.gene036556	MS.gene000036	PPI
MS.gene92376	MS.gene036556	PPI
MS.gene000035	MS.gene036556	PPI
MS.gene50329	MS.gene036556	PPI
MS.gene070462	MS.gene036556	PPI
MS.gene31637	MS.gene036556	PPI
MS.gene87573	MS.gene036556	PPI
MS.gene036556	MS.gene035263	PPI
MS.gene036556	MS.gene036664	PPI
MS.gene57537	MS.gene036556	PPI
MS.gene036556	MS.gene053257	PPI
MS.gene019504	MS.gene036556	PPI
MS.gene034762	MS.gene036556	PPI
MS.gene036556	MS.gene51201	PPI
MS.gene059156	MS.gene036556	PPI
MS.gene036556	MS.gene009893	PPI
MS.gene036556	MS.gene50336	PPI
MS.gene036556	MS.gene77704	PPI
MS.gene68580	MS.gene036556	PPI
MS.gene033444	MS.gene036556	PPI
MS.gene50306	MS.gene036556	PPI
MS.gene036556	MS.gene50305	PPI
MS.gene066639	MS.gene036556	PPI
MS.gene26949	MS.gene036556	PPI
MS.gene50309	MS.gene036556	PPI
MS.gene036760	MS.gene036556	PPI
MS.gene036556	MS.gene68890	PPI
MS.gene87200	MS.gene036556	PPI
MS.gene58311	MS.gene036556	PPI
MS.gene036556	MS.gene036663	PPI
MS.gene036556	MS.gene68580	PPI
MS.gene033432	MS.gene036556	PPI
MS.gene036556	MS.gene57525	PPI
MS.gene036556	MS.gene63657	PPI
MS.gene59639	MS.gene036556	PPI
MS.gene036556	MS.gene059157	PPI
MS.gene036556	MS.gene023996	PPI
MS.gene036556	MS.gene030114	PPI
MS.gene50327	MS.gene036556	PPI
MS.gene036556	MS.gene045473	PPI
MS.gene066635	MS.gene036556	PPI
MS.gene035261	MS.gene036556	PPI
MS.gene036556	MS.gene50301	PPI
MS.gene036556	MS.gene031590	PPI
MS.gene010758	MS.gene036556	PPI
MS.gene063670	MS.gene036556	PPI
MS.gene036556	MS.gene40984	PPI
MS.gene57530	MS.gene036556	PPI
MS.gene066626	MS.gene036556	PPI
MS.gene036556	MS.gene066623	PPI
MS.gene019506	MS.gene036556	PPI
MS.gene50326	MS.gene036556	PPI
MS.gene036556	MS.gene064090	PPI
MS.gene51200	MS.gene036556	PPI
MS.gene024002	MS.gene036556	PPI
MS.gene036556	MS.gene90742	PPI
MS.gene036556	MS.gene24212	PPI
MS.gene036556	MS.gene50332	PPI
MS.gene88774	MS.gene036556	PPI
MS.gene036556	MS.gene024979	PPI
MS.gene42452	MS.gene036556	PPI
MS.gene036556	MS.gene24826	PPI
MS.gene063414	MS.gene036556	PPI
MS.gene036556	MS.gene063472	PPI
MS.gene036556	MS.gene43790	PPI
MS.gene036556	MS.gene034680	PPI
MS.gene036662	MS.gene036556	PPI
MS.gene036556	MS.gene066626	PPI
MS.gene87563	MS.gene036556	PPI
MS.gene57526	MS.gene036556	PPI
MS.gene036556	MS.gene063474	PPI
MS.gene021553	MS.gene036556	PPI
MS.gene051820	MS.gene036556	PPI
MS.gene26957	MS.gene036556	PPI
MS.gene036556	MS.gene88416	PPI
MS.gene97996	MS.gene036556	PPI
MS.gene036582	MS.gene036556	PPI
MS.gene27021	MS.gene036556	PPI
MS.gene035235	MS.gene036556	PPI
MS.gene58320	MS.gene036556	PPI
MS.gene81242	MS.gene036556	PPI
MS.gene036556	MS.gene003076	PPI
MS.gene26101	MS.gene036556	PPI
MS.gene27283	MS.gene036556	PPI
MS.gene045140	MS.gene036556	PPI
MS.gene036556	MS.gene009892	PPI
MS.gene024004	MS.gene036556	PPI
MS.gene42444	MS.gene036556	PPI
MS.gene57717	MS.gene036556	PPI
MS.gene059101	MS.gene036556	PPI
MS.gene036556	MS.gene061241	PPI
MS.gene44886	MS.gene036556	PPI
MS.gene87562	MS.gene036556	PPI
MS.gene066623	MS.gene036556	PPI
MS.gene036556	MS.gene51188	PPI
MS.gene40904	MS.gene036556	PPI
MS.gene036556	MS.gene041489	PPI
MS.gene036556	MS.gene38220	PPI
MS.gene036556	MS.gene40986	PPI
MS.gene87569	MS.gene036556	PPI
MS.gene036556	MS.gene041394	PPI
MS.gene036556	MS.gene034688	PPI
MS.gene041491	MS.gene036556	PPI
MS.gene036556	MS.gene03060	PPI
MS.gene036556	MS.gene24213	PPI
MS.gene036556	MS.gene024011	PPI
MS.gene033443	MS.gene036556	PPI
MS.gene036556	MS.gene58241	PPI
MS.gene036556	MS.gene064109	PPI
MS.gene059096	MS.gene036556	PPI
MS.gene57528	MS.gene036556	PPI
MS.gene036556	MS.gene058696	PPI
MS.gene50297	MS.gene036556	PPI
MS.gene036556	MS.gene035238	PPI
MS.gene036556	MS.gene064114	PPI
MS.gene006711	MS.gene036556	PPI
MS.gene27285	MS.gene036556	PPI
MS.gene58716	MS.gene036556	PPI
MS.gene064091	MS.gene036556	PPI
MS.gene019505	MS.gene036556	PPI
MS.gene064112	MS.gene036556	PPI
MS.gene045476	MS.gene036556	PPI
MS.gene58785	MS.gene036556	PPI
MS.gene24208	MS.gene036556	PPI
MS.gene50307	MS.gene036556	PPI
MS.gene036556	MS.gene80610	PPI
MS.gene034690	MS.gene036556	PPI
MS.gene044429	MS.gene036556	PPI
MS.gene96407	MS.gene036556	PPI
MS.gene036556	MS.gene40886	PPI
MS.gene77857	MS.gene036556	PPI
MS.gene57527	MS.gene036556	PPI
MS.gene51191	MS.gene036556	PPI
MS.gene036556	MS.gene041391	PPI
MS.gene033426	MS.gene036556	PPI
MS.gene033430	MS.gene036556	PPI
MS.gene50298	MS.gene036556	PPI
MS.gene67687	MS.gene036556	PPI
MS.gene036556	MS.gene045474	PPI
MS.gene036556	MS.gene058701	PPI
MS.gene036556	MS.gene036558	PPI
MS.gene055694	MS.gene036556	PPI
MS.gene036556	MS.gene87554	PPI
MS.gene71159	MS.gene036556	PPI
MS.gene036556	MS.gene064108	PPI
MS.gene96448	MS.gene036556	PPI
MS.gene036556	MS.gene048193	PPI
MS.gene77858	MS.gene036556	PPI
MS.gene058692	MS.gene036556	PPI
MS.gene041392	MS.gene036556	PPI
MS.gene036556	MS.gene016220	PPI
MS.gene036556	MS.gene024008	PPI
MS.gene036556	MS.gene50337	PPI
MS.gene033083	MS.gene036556	PPI
MS.gene036556	MS.gene54541	PPI
MS.gene69309	MS.gene036556	PPI
MS.gene63658	MS.gene036556	PPI
MS.gene033081	MS.gene036556	PPI
MS.gene036556	MS.gene053299	PPI
MS.gene036556	MS.gene28758	PPI
MS.gene035262	MS.gene036556	PPI
MS.gene034686	MS.gene036556	PPI
MS.gene036556	MS.gene58240	PPI
MS.gene40982	MS.gene036556	PPI
MS.gene070461	MS.gene036556	PPI
MS.gene51199	MS.gene036556	PPI
MS.gene036556	MS.gene27284	PPI
MS.gene036556	MS.gene57717	PPI
MS.gene036556	MS.gene48221	PPI
MS.gene87559	MS.gene036556	PPI
MS.gene033431	MS.gene036556	PPI
MS.gene24212	MS.gene036556	PPI
MS.gene036556	MS.gene51190	PPI
MS.gene036556	MS.gene58319	PPI
MS.gene036556	MS.gene044426	PPI
MS.gene041475	MS.gene036556	PPI
MS.gene036556	MS.gene034681	PPI
MS.gene036556	MS.gene57532	PPI
MS.gene64203	MS.gene036556	PPI
MS.gene036556	MS.gene033442	PPI
MS.gene060367	MS.gene036556	PPI
MS.gene44892	MS.gene036556	PPI
MS.gene51202	MS.gene036556	PPI
MS.gene036556	MS.gene44428	PPI
MS.gene036556	MS.gene058669	PPI
MS.gene036556	MS.gene066120	PPI
MS.gene036556	MS.gene035235	PPI
MS.gene064111	MS.gene036556	PPI
MS.gene26829	MS.gene036556	PPI
MS.gene064104	MS.gene036556	PPI
MS.gene053256	MS.gene036556	PPI
MS.gene036556	MS.gene024000	PPI
MS.gene036556	MS.gene012215	PPI
MS.gene75875	MS.gene036556	PPI
MS.gene064090	MS.gene036556	PPI
MS.gene036556	MS.gene033079	PPI
MS.gene54049	MS.gene036556	PPI
MS.gene50337	MS.gene036556	PPI
MS.gene036556	MS.gene034677	PPI
MS.gene43789	MS.gene036556	PPI
MS.gene036556	MS.gene055694	PPI
MS.gene036556	MS.gene059101	PPI
MS.gene036556	MS.gene58316	PPI
MS.gene006710	MS.gene036556	PPI
MS.gene072177	MS.gene036556	PPI
MS.gene58722	MS.gene036556	PPI
MS.gene036556	MS.gene87584	PPI
MS.gene036556	MS.gene58321	PPI
MS.gene036556	MS.gene87564	PPI
MS.gene036556	MS.gene58315	PPI
MS.gene033079	MS.gene036556	PPI
MS.gene24213	MS.gene036556	PPI
MS.gene43796	MS.gene036556	PPI
MS.gene58312	MS.gene036556	PPI
MS.gene036556	MS.gene90743	PPI
MS.gene36704	MS.gene036556	PPI
MS.gene036556	MS.gene50311	PPI
MS.gene036556	MS.gene85454	PPI
MS.gene58313	MS.gene036556	PPI
MS.gene036556	MS.gene57538	PPI
MS.gene036556	MS.gene058693	PPI
MS.gene066622	MS.gene036556	PPI
MS.gene036556	MS.gene27319	PPI
MS.gene44887	MS.gene036556	PPI
MS.gene85043	MS.gene036556	PPI
MS.gene39265	MS.gene036556	PPI
MS.gene51188	MS.gene036556	PPI
MS.gene63655	MS.gene036556	PPI
MS.gene036556	MS.gene041395	PPI
MS.gene44883	MS.gene036556	PPI
MS.gene036583	MS.gene036556	PPI
MS.gene88780	MS.gene036556	PPI
MS.gene41046	MS.gene036556	PPI
MS.gene87588	MS.gene036556	PPI
MS.gene017412	MS.gene036556	PPI
MS.gene036556	MS.gene064083	PPI
MS.gene80884	MS.gene036556	PPI
MS.gene51192	MS.gene036556	PPI
MS.gene036556	MS.gene58783	PPI
MS.gene009883	MS.gene036556	PPI
MS.gene036556	MS.gene024420	PPI
MS.gene036556	MS.gene40988	PPI
MS.gene58317	MS.gene036556	PPI
MS.gene044563	MS.gene036556	PPI
MS.gene069075	MS.gene036556	PPI
MS.gene036556	MS.gene39265	PPI
MS.gene033427	MS.gene036556	PPI
MS.gene036556	MS.gene24173	PPI
MS.gene036556	MS.gene036584	PPI
MS.gene40985	MS.gene036556	PPI
MS.gene031591	MS.gene036556	PPI
MS.gene041474	MS.gene036556	PPI
MS.gene036556	MS.gene044429	PPI
MS.gene036556	MS.gene42451	PPI
MS.gene58321	MS.gene036556	PPI
MS.gene041388	MS.gene036556	PPI
MS.gene062698	MS.gene036556	PPI
MS.gene57536	MS.gene036556	PPI
MS.gene96126	MS.gene036556	PPI
MS.gene019503	MS.gene036556	PPI
MS.gene036556	MS.gene69307	PPI
MS.gene51208	MS.gene036556	PPI
MS.gene016524	MS.gene036556	PPI
MS.gene50304	MS.gene036556	PPI
MS.gene036556	MS.gene036581	PPI
MS.gene036556	MS.gene019507	PPI
MS.gene59943	MS.gene036556	PPI
MS.gene90744	MS.gene036556	PPI
MS.gene51204	MS.gene036556	PPI
MS.gene31587	MS.gene036556	PPI
MS.gene036557	MS.gene036556	PPI
MS.gene041393	MS.gene036556	PPI
MS.gene036556	MS.gene50320	PPI
MS.gene033441	MS.gene036556	PPI
MS.gene036556	MS.gene58314	PPI
MS.gene036556	MS.gene87557	PPI
MS.gene036556	MS.gene67501	PPI
MS.gene036556	MS.gene96406	PPI
MS.gene063826	MS.gene036556	PPI
MS.gene84698	MS.gene036556	PPI
MS.gene036556	MS.gene40878	PPI
MS.gene009891	MS.gene036556	PPI
MS.gene58239	MS.gene036556	PPI
MS.gene066641	MS.gene036556	PPI
MS.gene82082	MS.gene036556	PPI
MS.gene000038	MS.gene036556	PPI
MS.gene57531	MS.gene036556	PPI
MS.gene036556	MS.gene058703	PPI
MS.gene036556	MS.gene047279	PPI
MS.gene39262	MS.gene036556	PPI
MS.gene57535	MS.gene036556	PPI
MS.gene025887	MS.gene036556	PPI
MS.gene036556	MS.gene032969	PPI
MS.gene019507	MS.gene036556	PPI
MS.gene041470	MS.gene036556	PPI
MS.gene058694	MS.gene036556	PPI
MS.gene036556	MS.gene42445	PPI
MS.gene058701	MS.gene036556	PPI
MS.gene036556	MS.gene86273	PPI
MS.gene036556	MS.gene26830	PPI
MS.gene036556	MS.gene22715	PPI
MS.gene015089	MS.gene036556	PPI
MS.gene90743	MS.gene036556	PPI
MS.gene036556	MS.gene51207	PPI
MS.gene44885	MS.gene036556	PPI
MS.gene011679	MS.gene036556	PPI
MS.gene036556	MS.gene36595	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene036556.t1	MTR_5g097210	68.702	131	40	1	5	134	227	357	1.43e-57	183
MS.gene036556.t1	MTR_1g055195	68.657	134	40	2	3	134	339	472	1.09e-55	181
MS.gene036556.t1	MTR_4g118370	59.701	134	54	0	1	134	121	254	1.83e-51	164
MS.gene036556.t1	MTR_1g055135	61.379	145	48	4	4	142	233	375	2.50e-50	164
MS.gene036556.t1	MTR_1g055175	60.563	142	51	4	4	142	62	201	5.87e-49	156
MS.gene036556.t1	MTR_1g055165	60.563	142	51	4	4	142	179	318	2.97e-47	155
MS.gene036556.t1	MTR_4g117720	55.172	145	57	3	5	142	235	378	4.28e-46	154
MS.gene036556.t1	MTR_4g109280	55.634	142	56	4	5	142	221	359	7.10e-45	150
MS.gene036556.t1	MTR_3g103020	55.634	142	57	3	5	142	239	378	1.01e-44	150
MS.gene036556.t1	MTR_1g055250	63.158	114	41	1	4	116	131	244	2.90e-44	147
MS.gene036556.t1	MTR_6g060650	51.799	139	63	2	5	141	236	372	6.00e-44	148
MS.gene036556.t1	MTR_4g117750	57.554	139	52	1	3	134	215	353	2.98e-41	143
MS.gene036556.t1	MTR_4g117750	53.211	109	47	3	34	138	373	481	7.93e-28	107
MS.gene036556.t1	MTR_8g040935	53.147	143	59	4	6	142	68	208	2.58e-40	134
MS.gene036556.t1	MTR_4g117870	56.250	128	52	3	16	141	141	266	4.24e-40	135
MS.gene036556.t1	MTR_3g034180	53.521	142	55	4	5	141	353	488	4.41e-40	140
MS.gene036556.t1	MTR_4g117850	53.571	140	57	4	5	139	240	376	6.02e-40	137
MS.gene036556.t1	MTR_4g109270	50.704	142	64	3	5	142	225	364	1.71e-38	134
MS.gene036556.t1	MTR_4g116330	51.389	144	62	4	5	142	239	380	1.82e-38	134
MS.gene036556.t1	MTR_4g023380	47.239	163	58	4	5	141	218	378	3.63e-38	133
MS.gene036556.t1	MTR_8g433030	55.970	134	53	4	5	134	205	336	5.05e-38	132
MS.gene036556.t1	MTR_4g116320	52.239	134	60	2	5	134	119	252	6.33e-38	129
MS.gene036556.t1	MTR_8g032390	55.970	134	53	4	5	134	238	369	1.32e-37	131
MS.gene036556.t1	MTR_4g118360	54.386	114	48	2	31	142	15	126	1.48e-37	124
MS.gene036556.t1	MTR_8g433040	54.286	140	57	4	5	141	228	363	1.72e-37	131
MS.gene036556.t1	MTR_8g032380	54.286	140	57	4	5	141	228	363	1.72e-37	131
MS.gene036556.t1	MTR_4g122850	49.655	145	69	4	1	141	221	365	6.72e-37	130
MS.gene036556.t1	MTR_4g094365	51.429	140	63	4	5	139	224	363	2.64e-36	128
MS.gene036556.t1	MTR_5g070080	52.113	142	62	4	5	142	247	386	5.08e-36	127
MS.gene036556.t1	MTR_4g118380	53.333	120	45	2	5	113	238	357	6.43e-35	124
MS.gene036556.t1	MTR_4g118400	53.030	132	48	4	5	134	175	294	6.71e-35	122
MS.gene036556.t1	MTR_5g070130	48.951	143	67	4	5	142	236	377	9.14e-35	124
MS.gene036556.t1	MTR_4g023090	47.097	155	62	6	5	141	233	385	1.15e-34	124
MS.gene036556.t1	MTR_3g034130	50.806	124	59	1	5	126	239	362	1.15e-34	124
MS.gene036556.t1	MTR_4g023070	49.032	155	58	5	5	142	220	370	1.92e-34	123
MS.gene036556.t1	MTR_6g463430	52.083	144	61	4	1	141	63	201	5.08e-34	118
MS.gene036556.t1	MTR_3g034160	51.079	139	63	3	5	141	239	374	1.60e-32	118
MS.gene036556.t1	MTR_5g070088	50.000	142	65	4	5	141	245	385	1.75e-32	118
MS.gene036556.t1	MTR_4g023120	48.701	154	58	6	5	141	220	369	5.89e-32	116
MS.gene036556.t1	MTR_4g021785	47.945	146	67	5	1	142	215	355	5.91e-32	116
MS.gene036556.t1	MTR_4g023080	51.773	141	59	5	5	141	218	353	8.58e-32	115
MS.gene036556.t1	MTR_4g023130	51.408	142	58	6	5	141	177	312	1.14e-31	114
MS.gene036556.t1	MTR_4g023190	51.613	155	49	9	1	140	214	357	1.67e-31	115
MS.gene036556.t1	MTR_4g023150	50.968	155	50	9	1	140	215	358	5.74e-31	114
MS.gene036556.t1	MTR_4g117770	52.083	144	60	5	5	141	225	366	7.46e-31	114
MS.gene036556.t1	MTR_4g117810	52.083	144	60	5	5	141	225	366	7.46e-31	114
MS.gene036556.t1	MTR_4g117780	51.389	144	61	5	5	141	225	366	8.37e-31	113
MS.gene036556.t1	MTR_4g023200	48.387	155	54	9	1	140	215	358	1.95e-28	107
MS.gene036556.t1	MTR_7g079400	44.681	141	71	2	5	138	195	335	2.13e-28	106
MS.gene036556.t1	MTR_5g023000	52.083	96	42	2	49	142	6	99	3.57e-27	97.4
MS.gene036556.t1	MTR_7g079370	47.015	134	67	3	5	135	219	351	1.98e-25	99.4
MS.gene036556.t1	MTR_4g116330	51.754	114	46	5	36	142	230	341	4.09e-25	98.2
MS.gene036556.t1	MTR_8g102520	41.912	136	76	2	2	134	181	316	7.04e-25	97.1
MS.gene036556.t1	MTR_7g079450	42.537	134	68	3	5	134	3	131	8.66e-25	92.8
MS.gene036556.t1	MTR_4g023440	51.579	95	40	3	49	141	241	331	9.59e-22	89.0
MS.gene036556.t1	MTR_4g117530	44.037	109	54	3	36	142	150	253	4.02e-21	85.9
MS.gene036556.t1	MTR_4g122860	42.623	122	59	4	21	134	196	314	6.67e-21	86.7
MS.gene036556.t1	MTR_7g079420	39.860	143	72	6	5	138	1005	1142	7.26e-20	85.1
MS.gene036556.t1	MTR_4g114700	43.269	104	51	3	36	131	115	218	2.30e-18	78.6
MS.gene036556.t1	MTR_4g121580	48.958	96	39	4	15	107	230	318	3.46e-18	79.7
MS.gene036556.t1	MTR_8g098830	43.443	122	62	4	5	123	89	206	3.63e-18	77.8
MS.gene036556.t1	MTR_2g048580	39.098	133	70	5	5	134	212	336	7.39e-16	72.8
MS.gene036556.t1	MTR_4g023430	45.783	83	38	3	64	141	141	221	1.87e-14	67.8
MS.gene036556.t1	MTR_7g117720	51.163	86	36	3	55	134	186	271	1.92e-14	68.6
MS.gene036556.t1	MTR_8g013005	50.000	60	28	1	82	141	1	58	2.68e-11	55.8
MS.gene036556.t1	MTR_4g122840	34.074	135	47	5	11	139	165	263	3.95e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 34 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTCTACACATTGTGGTTTA+TGG	0.100871	8.3:+8114165	MS.gene036556:CDS
GTAGTAACAAATGGTTCTTA+TGG	0.251967	8.3:+8114353	MS.gene036556:CDS
TTAGAGGATTTCTCAGTCTA+TGG	0.277856	8.3:+8114192	MS.gene036556:CDS
TTCTACACATTGTGGTTTAT+GGG	0.314260	8.3:+8114166	MS.gene036556:CDS
TATTGTTGCATTTCATTTAA+CGG	0.314412	8.3:+8114097	MS.gene036556:CDS
GATATGATGCAATTGATATA+TGG	0.320951	8.3:+8114222	MS.gene036556:CDS
AGATGCACTTGTATTTCTAT+TGG	0.341222	8.3:+8114430	MS.gene036556:CDS
TAGTAACAAATGGTTCTTAT+GGG	0.351884	8.3:+8114354	MS.gene036556:CDS
GAATCATAGTCAACATCAAC+TGG	0.373741	8.3:-8114146	None:intergenic
TGTGGTTTATGGGTATTTAG+AGG	0.378055	8.3:+8114176	MS.gene036556:CDS
TGCTCGTTGTCACCAGGAAC+AGG	0.396247	8.3:-8114482	None:intergenic
ATGAAGTCGGTGGGACCAAC+AGG	0.407414	8.3:-8114296	None:intergenic
CCACTCTTTGTACAACATAC+AGG	0.447432	8.3:-8114323	None:intergenic
AAGACTCTTGTTCTTCCTGT+TGG	0.456705	8.3:+8114281	MS.gene036556:CDS
TACAAGTGCATCTTTACAAA+AGG	0.470897	8.3:-8114420	None:intergenic
AATACAAAGTACATTCATCT+TGG	0.473647	8.3:+8114255	MS.gene036556:CDS
GGTGATATTGTAGTAACAAA+TGG	0.485444	8.3:+8114344	MS.gene036556:CDS
TAGAGGATTTCTCAGTCTAT+GGG	0.489737	8.3:+8114193	MS.gene036556:CDS
ATATGATGCAATTGATATAT+GGG	0.495926	8.3:+8114223	MS.gene036556:CDS
TTGCATTTCATTTAACGGAA+AGG	0.496118	8.3:+8114102	MS.gene036556:CDS
AACAAATGGTTCTTATGGGT+TGG	0.502071	8.3:+8114358	MS.gene036556:CDS
TAACCTTGCTCGTTGTCACC+AGG	0.523641	8.3:-8114488	None:intergenic
CACTCTTTGTACAACATACA+GGG	0.563133	8.3:-8114322	None:intergenic
TGCAATTGATATATGGGTGA+TGG	0.565148	8.3:+8114229	MS.gene036556:CDS
TAGTCAACATCAACTGGGAG+AGG	0.571901	8.3:-8114140	None:intergenic
GACTATGATTCTACACATTG+TGG	0.583006	8.3:+8114158	MS.gene036556:CDS
GTTCCTGGTGACAACGAGCA+AGG	0.617466	8.3:+8114485	MS.gene036556:CDS
CCTGTATGTTGTACAAAGAG+TGG	0.630075	8.3:+8114323	MS.gene036556:CDS
TACAGGGAAAATGAAGTCGG+TGG	0.632059	8.3:-8114306	None:intergenic
GCTCGTTGTCACCAGGAACA+GGG	0.633306	8.3:-8114481	None:intergenic
TTGGTGAAATATAACAACAA+AGG	0.638031	8.3:+8114377	MS.gene036556:CDS
ACAGGGAAAATGAAGTCGGT+GGG	0.646954	8.3:-8114305	None:intergenic
ACATACAGGGAAAATGAAGT+CGG	0.663561	8.3:-8114309	None:intergenic
AATCATAGTCAACATCAACT+GGG	0.686130	8.3:-8114145	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATGATGCAATTGATATAT+GGG	+	chr8.3:8114223-8114242	MS.gene036556:CDS	20.0%
!!	TATTGTTGCATTTCATTTAA+CGG	+	chr8.3:8114097-8114116	MS.gene036556:CDS	20.0%
!	AATACAAAGTACATTCATCT+TGG	+	chr8.3:8114255-8114274	MS.gene036556:CDS	25.0%
!	GATATGATGCAATTGATATA+TGG	+	chr8.3:8114222-8114241	MS.gene036556:CDS	25.0%
!	TAGTAACAAATGGTTCTTAT+GGG	+	chr8.3:8114354-8114373	MS.gene036556:CDS	25.0%
!	TTGGTGAAATATAACAACAA+AGG	+	chr8.3:8114377-8114396	MS.gene036556:CDS	25.0%
	AATCATAGTCAACATCAACT+GGG	-	chr8.3:8114148-8114167	None:intergenic	30.0%
	ATTCTACACATTGTGGTTTA+TGG	+	chr8.3:8114165-8114184	MS.gene036556:CDS	30.0%
	GGTGATATTGTAGTAACAAA+TGG	+	chr8.3:8114344-8114363	MS.gene036556:CDS	30.0%
	GTAGTAACAAATGGTTCTTA+TGG	+	chr8.3:8114353-8114372	MS.gene036556:CDS	30.0%
	TACAAGTGCATCTTTACAAA+AGG	-	chr8.3:8114423-8114442	None:intergenic	30.0%
	TTCTACACATTGTGGTTTAT+GGG	+	chr8.3:8114166-8114185	MS.gene036556:CDS	30.0%
	TTGCATTTCATTTAACGGAA+AGG	+	chr8.3:8114102-8114121	MS.gene036556:CDS	30.0%
!	AGATGCACTTGTATTTCTAT+TGG	+	chr8.3:8114430-8114449	MS.gene036556:CDS	30.0%
	AACAAATGGTTCTTATGGGT+TGG	+	chr8.3:8114358-8114377	MS.gene036556:CDS	35.0%
	ACATACAGGGAAAATGAAGT+CGG	-	chr8.3:8114312-8114331	None:intergenic	35.0%
	CACTCTTTGTACAACATACA+GGG	-	chr8.3:8114325-8114344	None:intergenic	35.0%
	GAATCATAGTCAACATCAAC+TGG	-	chr8.3:8114149-8114168	None:intergenic	35.0%
	GACTATGATTCTACACATTG+TGG	+	chr8.3:8114158-8114177	MS.gene036556:CDS	35.0%
	TAGAGGATTTCTCAGTCTAT+GGG	+	chr8.3:8114193-8114212	MS.gene036556:CDS	35.0%
	TGCAATTGATATATGGGTGA+TGG	+	chr8.3:8114229-8114248	MS.gene036556:CDS	35.0%
	TGTGGTTTATGGGTATTTAG+AGG	+	chr8.3:8114176-8114195	MS.gene036556:CDS	35.0%
	TTAGAGGATTTCTCAGTCTA+TGG	+	chr8.3:8114192-8114211	MS.gene036556:CDS	35.0%
	AAGACTCTTGTTCTTCCTGT+TGG	+	chr8.3:8114281-8114300	MS.gene036556:CDS	40.0%
	CCACTCTTTGTACAACATAC+AGG	-	chr8.3:8114326-8114345	None:intergenic	40.0%
	CCTGTATGTTGTACAAAGAG+TGG	+	chr8.3:8114323-8114342	MS.gene036556:CDS	40.0%
	ACAGGGAAAATGAAGTCGGT+GGG	-	chr8.3:8114308-8114327	None:intergenic	45.0%
	TACAGGGAAAATGAAGTCGG+TGG	-	chr8.3:8114309-8114328	None:intergenic	45.0%
	TAGTCAACATCAACTGGGAG+AGG	-	chr8.3:8114143-8114162	None:intergenic	45.0%
	TAACCTTGCTCGTTGTCACC+AGG	-	chr8.3:8114491-8114510	None:intergenic	50.0%
!!	CTGCTTTTACTCCCTGTTCC+TGG	+	chr8.3:8114470-8114489	MS.gene036556:CDS	50.0%
	ATGAAGTCGGTGGGACCAAC+AGG	-	chr8.3:8114299-8114318	None:intergenic	55.0%
	GCTCGTTGTCACCAGGAACA+GGG	-	chr8.3:8114484-8114503	None:intergenic	55.0%
	GTTCCTGGTGACAACGAGCA+AGG	+	chr8.3:8114485-8114504	MS.gene036556:CDS	55.0%
	TGCTCGTTGTCACCAGGAAC+AGG	-	chr8.3:8114485-8114504	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	8114083	8114511	8114083	ID=MS.gene036556
chr8.3	mRNA	8114083	8114511	8114083	ID=MS.gene036556.t1;Parent=MS.gene036556
chr8.3	exon	8114083	8114511	8114083	ID=MS.gene036556.t1.exon1;Parent=MS.gene036556.t1
chr8.3	CDS	8114083	8114511	8114083	ID=cds.MS.gene036556.t1;Parent=MS.gene036556.t1

Gene Sequence

>MS.gene036556

ATGGATGTCTTTGTTATTGTTGCATTTCATTTAACGGAAAGGAAACTTATAGAGATTCCTCTCCCAGTTGATGTTGACTATGATTCTACACATTGTGGTTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTTGAGATATGATGCAATTGATATATGGGTGATGGAAGAATACAAAGTACATTCATCTTGGACTAAGACTCTTGTTCTTCCTGTTGGTCCCACCGACTTCATTTTCCCTGTATGTTGTACAAAGAGTGGTGATATTGTAGTAACAAATGGTTCTTATGGGTTGGTGAAATATAACAACAAAGGAGAGTTTCTAGAGCGTAACTCCTTTTGTAAAGATGCACTTGTATTTCTATTGGCTATGTATACAGAGTCTCTGCTTTTACTCCCTGTTCCTGGTGACAACGAGCAAGGTTAA

Protein sequence

>MS.gene036556.t1

MDVFVIVAFHLTERKLIEIPLPVDVDYDSTHCGLWVFRGFLSLWVLRYDAIDIWVMEEYKVHSSWTKTLVLPVGPTDFIFPVCCTKSGDIVVTNGSYGLVKYNNKGEFLERNSFCKDALVFLLAMYTESLLLLPVPGDNEQG