AlfalfaGEDB | MS.gene50298

M. sativa cultivar XinJiangDaYe / MS.gene50298

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50298.t1	XP_003605032.1	74.5	145	37	0	1	145	208	352	1.20E-54	222.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50298.t1	G7JVS7	74.5	145	37	0	1	145	208	352	8.5e-55	222.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene50298	MS.gene072177	PPI
MS.gene50298	MS.gene58781	PPI
MS.gene50298	MS.gene57525	PPI
MS.gene58313	MS.gene50298	PPI
MS.gene50298	MS.gene023996	PPI
MS.gene50298	MS.gene031591	PPI
MS.gene50298	MS.gene030114	PPI
MS.gene50298	MS.gene58716	PPI
MS.gene066622	MS.gene50298	PPI
MS.gene50298	MS.gene045473	PPI
MS.gene50298	MS.gene50301	PPI
MS.gene50298	MS.gene87569	PPI
MS.gene44883	MS.gene50298	PPI
MS.gene50298	MS.gene88774	PPI
MS.gene50298	MS.gene045474	PPI
MS.gene50298	MS.gene036558	PPI
MS.gene50298	MS.gene041474	PPI
MS.gene50298	MS.gene44883	PPI
MS.gene50298	MS.gene019504	PPI
MS.gene50298	MS.gene40984	PPI
MS.gene87588	MS.gene50298	PPI
MS.gene017412	MS.gene50298	PPI
MS.gene50298	MS.gene066623	PPI
MS.gene50298	MS.gene064108	PPI
MS.gene50298	MS.gene064090	PPI
MS.gene50298	MS.gene24208	PPI
MS.gene50298	MS.gene58317	PPI
MS.gene009883	MS.gene50298	PPI
MS.gene50298	MS.gene90742	PPI
MS.gene50298	MS.gene24212	PPI
MS.gene50298	MS.gene51191	PPI
MS.gene50298	MS.gene40902	PPI
MS.gene50298	MS.gene58240	PPI
MS.gene27020	MS.gene50298	PPI
MS.gene50298	MS.gene96448	PPI
MS.gene50298	MS.gene063472	PPI
MS.gene50298	MS.gene025887	PPI
MS.gene50298	MS.gene57717	PPI
MS.gene50298	MS.gene034680	PPI
MS.gene50298	MS.gene31587	PPI
MS.gene50298	MS.gene27021	PPI
MS.gene50298	MS.gene51208	PPI
MS.gene50298	MS.gene044563	PPI
MS.gene50298	MS.gene50327	PPI
MS.gene96126	MS.gene50298	PPI
MS.gene50298	MS.gene066626	PPI
MS.gene50298	MS.gene40982	PPI
MS.gene50298	MS.gene50339	PPI
MS.gene50298	MS.gene063474	PPI
MS.gene50298	MS.gene51190	PPI
MS.gene50298	MS.gene42452	PPI
MS.gene50298	MS.gene009883	PPI
MS.gene50298	MS.gene58785	PPI
MS.gene50298	MS.gene044426	PPI
MS.gene50298	MS.gene88416	PPI
MS.gene50298	MS.gene034681	PPI
MS.gene51204	MS.gene50298	PPI
MS.gene50298	MS.gene84698	PPI
MS.gene50298	MS.gene57532	PPI
MS.gene50298	MS.gene003076	PPI
MS.gene036557	MS.gene50298	PPI
MS.gene50298	MS.gene019506	PPI
MS.gene50298	MS.gene009892	PPI
MS.gene50298	MS.gene57535	PPI
MS.gene50298	MS.gene87559	PPI
MS.gene50298	MS.gene058669	PPI
MS.gene50298	MS.gene066120	PPI
MS.gene50298	MS.gene51192	PPI
MS.gene50298	MS.gene063826	PPI
MS.gene50298	MS.gene033875	PPI
MS.gene82082	MS.gene50298	PPI
MS.gene50298	MS.gene041489	PPI
MS.gene50298	MS.gene38220	PPI
MS.gene50298	MS.gene40986	PPI
MS.gene50298	MS.gene045476	PPI
MS.gene000038	MS.gene50298	PPI
MS.gene50298	MS.gene36704	PPI
MS.gene50298	MS.gene034688	PPI
MS.gene50298	MS.gene58239	PPI
MS.gene50298	MS.gene43796	PPI
MS.gene50298	MS.gene24213	PPI
MS.gene50298	MS.gene033440	PPI
MS.gene50298	MS.gene31637	PPI
MS.gene50298	MS.gene024011	PPI
MS.gene57535	MS.gene50298	PPI
MS.gene50298	MS.gene58313	PPI
MS.gene50298	MS.gene034677	PPI
MS.gene50298	MS.gene055694	PPI
MS.gene50298	MS.gene035238	PPI
MS.gene50298	MS.gene85043	PPI
MS.gene50298	MS.gene064114	PPI
MS.gene50298	MS.gene87563	PPI
MS.gene50298	MS.gene062698	PPI
MS.gene50298	MS.gene26829	PPI
MS.gene50298	MS.gene80610	PPI
MS.gene44885	MS.gene50298	PPI
MS.gene011679	MS.gene50298	PPI
MS.gene50298	MS.gene26949	PPI
MS.gene50298	MS.gene036557	PPI
MS.gene50298	MS.gene90743	PPI
MS.gene50298	MS.gene053256	PPI
MS.gene50298	MS.gene40886	PPI
MS.gene50298	MS.gene85454	PPI
MS.gene50298	MS.gene041391	PPI
MS.gene50298	MS.gene033443	PPI
MS.gene50298	MS.gene036583	PPI
MS.gene50298	MS.gene006711	PPI
MS.gene50298	MS.gene51202	PPI
MS.gene50298	MS.gene26957	PPI
MS.gene50298	MS.gene57536	PPI
MS.gene50298	MS.gene50307	PPI
MS.gene50298	MS.gene51200	PPI
MS.gene50298	MS.gene021553	PPI
MS.gene50298	MS.gene011106	PPI
MS.gene50298	MS.gene44887	PPI
MS.gene50298	MS.gene058701	PPI
MS.gene50298	MS.gene87554	PPI
MS.gene50298	MS.gene009891	PPI
MS.gene50298	MS.gene064083	PPI
MS.gene50298	MS.gene27051	PPI
MS.gene50298	MS.gene048193	PPI
MS.gene50298	MS.gene58312	PPI
MS.gene50298	MS.gene87562	PPI
MS.gene50298	MS.gene58722	PPI
MS.gene50298	MS.gene024420	PPI
MS.gene50298	MS.gene016220	PPI
MS.gene50298	MS.gene57533	PPI
MS.gene50298	MS.gene024008	PPI
MS.gene50298	MS.gene50337	PPI
MS.gene50298	MS.gene063670	PPI
MS.gene50298	MS.gene54541	PPI
MS.gene50298	MS.gene39265	PPI
MS.gene50298	MS.gene50306	PPI
MS.gene50298	MS.gene041393	PPI
MS.gene50298	MS.gene69309	PPI
MS.gene50298	MS.gene060368	PPI
MS.gene50298	MS.gene053299	PPI
MS.gene50298	MS.gene000035	PPI
MS.gene50298	MS.gene28758	PPI
MS.gene50298	MS.gene064111	PPI
MS.gene50298	MS.gene044429	PPI
MS.gene50298	MS.gene034690	PPI
MS.gene50298	MS.gene57531	PPI
MS.gene50298	MS.gene066620	PPI
MS.gene50298	MS.gene50304	PPI
MS.gene50298	MS.gene27284	PPI
MS.gene50298	MS.gene041388	PPI
MS.gene066620	MS.gene50298	PPI
MS.gene50298	MS.gene019503	PPI
MS.gene50298	MS.gene063414	PPI
MS.gene50298	MS.gene48221	PPI
MS.gene58781	MS.gene50298	PPI
MS.gene50298	MS.gene51204	PPI
MS.gene50298	MS.gene041470	PPI
MS.gene50298	MS.gene58319	PPI
MS.gene50298	MS.gene034762	PPI
MS.gene50298	MS.gene71159	PPI
MS.gene50298	MS.gene59943	PPI
MS.gene50298	MS.gene033441	PPI
MS.gene000035	MS.gene50298	PPI
MS.gene50298	MS.gene033442	PPI
MS.gene87573	MS.gene50298	PPI
MS.gene50298	MS.gene060366	PPI
MS.gene019504	MS.gene50298	PPI
MS.gene50298	MS.gene44428	PPI
MS.gene50298	MS.gene96407	PPI
MS.gene50298	MS.gene058694	PPI
MS.gene50298	MS.gene035235	PPI
MS.gene50298	MS.gene058703	PPI
MS.gene50298	MS.gene033432	PPI
MS.gene50298	MS.gene50329	PPI
MS.gene50298	MS.gene57528	PPI
MS.gene50298	MS.gene87588	PPI
MS.gene50298	MS.gene024000	PPI
MS.gene50298	MS.gene012215	PPI
MS.gene26949	MS.gene50298	PPI
MS.gene50298	MS.gene059096	PPI
MS.gene50298	MS.gene033079	PPI
MS.gene50298	MS.gene059101	PPI
MS.gene50298	MS.gene033444	PPI
MS.gene50298	MS.gene035236	PPI
MS.gene50298	MS.gene58316	PPI
MS.gene50298	MS.gene033430	PPI
MS.gene50298	MS.gene58321	PPI
MS.gene50298	MS.gene016524	PPI
MS.gene50298	MS.gene87564	PPI
MS.gene50298	MS.gene58315	PPI
MS.gene50298	MS.gene36595	PPI
MS.gene50298	MS.gene011679	PPI
MS.gene50298	MS.gene045140	PPI
MS.gene50298	MS.gene041473	PPI
MS.gene50298	MS.gene50311	PPI
MS.gene50298	MS.gene88780	PPI
MS.gene50298	MS.gene064112	PPI
MS.gene50298	MS.gene058989	PPI
MS.gene50298	MS.gene036556	PPI
MS.gene50298	MS.gene57538	PPI
MS.gene50298	MS.gene041468	PPI
MS.gene019506	MS.gene50298	PPI
MS.gene50298	MS.gene060367	PPI
MS.gene50298	MS.gene058693	PPI
MS.gene50298	MS.gene27319	PPI
MS.gene50298	MS.gene015089	PPI
MS.gene50298	MS.gene041395	PPI
MS.gene50298	MS.gene066641	PPI
MS.gene50298	MS.gene51189	PPI
MS.gene50298	MS.gene046958	PPI
MS.gene50298	MS.gene066622	PPI
MS.gene50298	MS.gene24286	PPI
MS.gene50298	MS.gene066635	PPI
MS.gene50298	MS.gene90744	PPI
MS.gene50298	MS.gene87573	PPI
MS.gene50298	MS.gene58783	PPI
MS.gene50298	MS.gene82082	PPI
MS.gene063414	MS.gene50298	PPI
MS.gene50298	MS.gene44885	PPI
MS.gene50298	MS.gene036760	PPI
MS.gene50298	MS.gene40988	PPI
MS.gene50298	MS.gene27283	PPI
MS.gene50298	MS.gene24173	PPI
MS.gene50298	MS.gene036584	PPI
MS.gene50298	MS.gene036662	PPI
MS.gene50298	MS.gene58311	PPI
MS.gene50298	MS.gene88776	PPI
MS.gene50298	MS.gene42451	PPI
MS.gene26957	MS.gene50298	PPI
MS.gene50298	MS.gene35068	PPI
MS.gene50298	MS.gene035261	PPI
MS.gene50298	MS.gene023999	PPI
MS.gene50298	MS.gene070461	PPI
MS.gene50298	MS.gene69307	PPI
MS.gene50298	MS.gene59639	PPI
MS.gene50298	MS.gene036581	PPI
MS.gene50298	MS.gene019507	PPI
MS.gene50298	MS.gene033431	PPI
MS.gene51202	MS.gene50298	PPI
MS.gene50298	MS.gene058692	PPI
MS.gene50298	MS.gene000036	PPI
MS.gene50298	MS.gene50320	PPI
MS.gene50298	MS.gene58314	PPI
MS.gene50298	MS.gene87557	PPI
MS.gene50298	MS.gene059156	PPI
MS.gene50298	MS.gene51199	PPI
MS.gene50298	MS.gene035263	PPI
MS.gene50298	MS.gene006710	PPI
MS.gene50298	MS.gene67501	PPI
MS.gene50298	MS.gene96406	PPI
MS.gene87569	MS.gene50298	PPI
MS.gene50298	MS.gene27285	PPI
MS.gene50298	MS.gene035262	PPI
MS.gene041491	MS.gene50298	PPI
MS.gene50298	MS.gene77857	PPI
MS.gene50298	MS.gene028390	PPI
MS.gene50298	MS.gene40878	PPI
MS.gene50298	MS.gene57526	PPI
MS.gene50298	MS.gene27020	PPI
MS.gene50298	MS.gene069075	PPI
MS.gene059096	MS.gene50298	PPI
MS.gene50298	MS.gene051820	PPI
MS.gene50298	MS.gene064091	PPI
MS.gene50298	MS.gene047279	PPI
MS.gene50298	MS.gene060370	PPI
MS.gene50298	MS.gene50305	PPI
MS.gene50298	MS.gene024002	PPI
MS.gene50298	MS.gene032969	PPI
MS.gene034690	MS.gene50298	PPI
MS.gene50298	MS.gene68890	PPI
MS.gene50298	MS.gene041392	PPI
MS.gene50298	MS.gene50297	PPI
MS.gene50298	MS.gene42445	PPI
MS.gene50298	MS.gene86273	PPI
MS.gene50298	MS.gene26830	PPI
MS.gene50298	MS.gene40985	PPI
MS.gene50298	MS.gene22715	PPI
MS.gene50298	MS.gene000038	PPI
MS.gene50298	MS.gene038756	PPI
MS.gene50298	MS.gene92376	PPI
MS.gene50298	MS.gene51207	PPI
MS.gene50298	MS.gene57529	PPI
MS.gene50298	MS.gene63657	PPI
MS.gene50298	MS.gene017412	PPI
MS.gene50298	MS.gene059157	PPI
MS.gene50298	MS.gene57527	PPI
MS.gene50298	MS.gene024004	PPI
MS.gene50298	MS.gene070462	PPI
MS.gene50298	MS.gene061240	PPI
MS.gene50298	MS.gene54049	PPI
MS.gene50298	MS.gene036582	PPI
MS.gene50298	MS.gene031590	PPI
MS.gene50298	MS.gene033427	PPI
MS.gene50298	MS.gene064086	PPI
MS.gene50298	MS.gene035234	PPI
MS.gene50298	MS.gene50326	PPI
MS.gene50298	MS.gene034686	PPI
MS.gene50298	MS.gene41046	PPI
MS.gene50298	MS.gene066639	PPI
MS.gene50298	MS.gene041491	PPI
MS.gene50298	MS.gene50332	PPI
MS.gene50298	MS.gene42447	PPI
MS.gene50298	MS.gene77856	PPI
MS.gene50298	MS.gene024979	PPI
MS.gene69309	MS.gene50298	PPI
MS.gene50298	MS.gene041475	PPI
MS.gene50298	MS.gene43789	PPI
MS.gene50298	MS.gene64203	PPI
MS.gene50298	MS.gene64001	PPI
MS.gene031591	MS.gene50298	PPI
MS.gene50298	MS.gene24826	PPI
MS.gene50298	MS.gene40904	PPI
MS.gene50298	MS.gene044425	PPI
MS.gene50298	MS.gene43790	PPI
MS.gene50298	MS.gene032970	PPI
MS.gene50298	MS.gene57537	PPI
MS.gene50298	MS.gene064104	PPI
MS.gene50298	MS.gene87584	PPI
MS.gene50298	MS.gene81242	PPI
MS.gene50298	MS.gene59637	PPI
MS.gene50298	MS.gene033426	PPI
MS.gene50298	MS.gene27022	PPI
MS.gene50298	MS.gene57530	PPI
MS.gene50298	MS.gene97996	PPI
MS.gene50298	MS.gene87585	PPI
MS.gene50298	MS.gene041390	PPI
MS.gene50298	MS.gene024009	PPI
MS.gene50298	MS.gene036599	PPI
MS.gene50298	MS.gene40887	PPI
MS.gene50298	MS.gene87200	PPI
MS.gene50298	MS.gene42444	PPI
MS.gene50298	MS.gene67687	PPI
MS.gene50298	MS.gene62398	PPI
MS.gene50298	MS.gene44892	PPI
MS.gene50298	MS.gene26101	PPI
MS.gene063826	MS.gene50298	PPI
MS.gene50298	MS.gene006705	PPI
MS.gene50298	MS.gene80884	PPI
MS.gene50298	MS.gene061241	PPI
MS.gene50298	MS.gene035237	PPI
MS.gene44892	MS.gene50298	PPI
MS.gene50298	MS.gene51188	PPI
MS.gene50298	MS.gene44886	PPI
MS.gene50298	MS.gene50309	PPI
MS.gene064111	MS.gene50298	PPI
MS.gene50298	MS.gene041394	PPI
MS.gene50298	MS.gene03060	PPI
MS.gene50298	MS.gene036664	PPI
MS.gene50298	MS.gene053257	PPI
MS.gene50298	MS.gene58241	PPI
MS.gene50298	MS.gene010758	PPI
MS.gene50298	MS.gene77858	PPI
MS.gene50298	MS.gene51201	PPI
MS.gene50298	MS.gene064109	PPI
MS.gene50298	MS.gene058696	PPI
MS.gene50298	MS.gene009893	PPI
MS.gene50298	MS.gene045475	PPI
MS.gene50298	MS.gene63655	PPI
MS.gene50298	MS.gene50336	PPI
MS.gene50298	MS.gene39262	PPI
MS.gene50298	MS.gene87586	PPI
MS.gene50298	MS.gene77704	PPI
MS.gene50298	MS.gene019505	PPI
MS.gene006710	MS.gene50298	PPI
MS.gene50298	MS.gene96126	PPI
MS.gene50298	MS.gene58320	PPI
MS.gene58722	MS.gene50298	PPI
MS.gene50298	MS.gene033083	PPI
MS.gene50298	MS.gene75875	PPI
MS.gene43796	MS.gene50298	PPI
MS.gene50298	MS.gene63658	PPI
MS.gene50298	MS.gene60027	PPI
MS.gene50298	MS.gene033081	PPI
MS.gene50298	MS.gene036663	PPI
MS.gene50298	MS.gene68580	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50298.t1	MTR_4g023080	73.973	146	38	0	1	146	208	353	1.59e-72	221
MS.gene50298.t1	MTR_4g023130	72.603	146	40	0	1	146	167	312	6.48e-71	216
MS.gene50298.t1	MTR_4g023090	68.293	164	35	3	1	147	223	386	1.08e-70	217
MS.gene50298.t1	MTR_4g023380	65.698	172	34	3	1	147	208	379	3.02e-69	213
MS.gene50298.t1	MTR_4g021785	68.027	147	47	0	1	147	209	355	1.44e-66	206
MS.gene50298.t1	MTR_4g023070	61.875	160	47	2	1	146	210	369	1.95e-60	191
MS.gene50298.t1	MTR_4g023120	60.870	161	49	2	1	147	210	370	1.28e-59	188
MS.gene50298.t1	MTR_3g103020	62.667	150	53	2	1	147	229	378	2.65e-58	185
MS.gene50298.t1	MTR_8g040935	60.390	154	54	3	1	147	55	208	9.50e-57	176
MS.gene50298.t1	MTR_4g109270	61.333	150	55	2	1	147	215	364	2.14e-56	180
MS.gene50298.t1	MTR_4g023440	86.458	96	13	0	52	147	237	332	2.57e-53	171
MS.gene50298.t1	MTR_4g023150	62.667	150	51	3	1	145	209	358	5.46e-53	171
MS.gene50298.t1	MTR_4g116330	57.237	152	60	2	1	147	229	380	1.54e-52	171
MS.gene50298.t1	MTR_4g023190	62.000	150	52	3	1	145	208	357	2.65e-52	169
MS.gene50298.t1	MTR_4g023200	61.333	150	53	3	1	145	209	358	2.89e-51	167
MS.gene50298.t1	MTR_6g060650	56.376	149	60	3	1	146	226	372	2.39e-50	165
MS.gene50298.t1	MTR_4g116320	59.060	149	54	3	1	144	109	255	1.36e-49	159
MS.gene50298.t1	MTR_8g433040	60.145	138	53	2	11	147	228	364	2.67e-47	157
MS.gene50298.t1	MTR_8g032380	60.145	138	53	2	11	147	228	364	2.67e-47	157
MS.gene50298.t1	MTR_4g109280	55.921	152	59	4	1	147	211	359	3.36e-47	156
MS.gene50298.t1	MTR_4g117780	58.170	153	58	2	1	147	215	367	8.13e-47	155
MS.gene50298.t1	MTR_6g463430	59.603	151	52	4	1	147	57	202	3.47e-46	149
MS.gene50298.t1	MTR_3g034180	57.047	149	58	4	2	147	344	489	6.35e-46	155
MS.gene50298.t1	MTR_4g117770	58.170	153	58	2	1	147	215	367	7.93e-46	153
MS.gene50298.t1	MTR_4g117810	58.170	153	58	2	1	147	215	367	7.93e-46	153
MS.gene50298.t1	MTR_4g117720	56.051	157	57	5	1	147	224	378	1.90e-45	152
MS.gene50298.t1	MTR_4g117850	56.863	153	54	6	1	144	227	376	2.19e-45	152
MS.gene50298.t1	MTR_4g117870	60.465	129	46	4	22	147	141	267	1.40e-44	147
MS.gene50298.t1	MTR_8g433030	59.259	135	50	4	11	142	205	337	4.40e-44	147
MS.gene50298.t1	MTR_8g032390	59.259	135	50	4	11	142	238	370	9.56e-44	147
MS.gene50298.t1	MTR_4g122850	56.579	152	59	6	1	147	215	364	3.03e-43	146
MS.gene50298.t1	MTR_5g097210	57.143	147	55	5	1	143	217	359	2.28e-42	144
MS.gene50298.t1	MTR_3g034160	57.823	147	58	3	2	146	230	374	2.56e-42	144
MS.gene50298.t1	MTR_5g070130	50.000	152	71	3	1	147	226	377	5.32e-42	143
MS.gene50298.t1	MTR_4g094365	54.248	153	62	5	1	147	214	364	7.50e-42	142
MS.gene50298.t1	MTR_5g070080	55.629	151	62	4	1	147	237	386	8.79e-41	140
MS.gene50298.t1	MTR_5g070088	50.968	155	65	4	1	147	235	386	8.56e-40	137
MS.gene50298.t1	MTR_1g055195	51.007	149	64	5	1	144	331	475	3.22e-39	138
MS.gene50298.t1	MTR_4g023430	79.012	81	12	1	72	147	142	222	3.45e-39	132
MS.gene50298.t1	MTR_3g034130	52.632	133	60	2	1	132	229	359	1.34e-38	134
MS.gene50298.t1	MTR_1g055175	46.667	150	74	4	1	146	53	200	3.22e-37	126
MS.gene50298.t1	MTR_5g023000	61.616	99	36	1	51	147	1	99	1.93e-36	121
MS.gene50298.t1	MTR_4g118360	55.039	129	47	5	25	146	1	125	2.52e-36	121
MS.gene50298.t1	MTR_4g118380	53.030	132	50	3	1	122	228	357	6.24e-36	127
MS.gene50298.t1	MTR_1g055165	46.358	151	75	4	1	147	170	318	1.06e-35	125
MS.gene50298.t1	MTR_1g055135	45.806	155	73	4	1	147	224	375	3.03e-35	125
MS.gene50298.t1	MTR_4g118400	51.748	143	54	4	1	141	165	294	5.78e-35	123
MS.gene50298.t1	MTR_4g116330	57.658	111	43	1	41	147	231	341	1.97e-34	122
MS.gene50298.t1	MTR_4g117750	50.758	132	54	2	25	145	350	481	8.15e-33	120
MS.gene50298.t1	MTR_4g117750	47.436	156	68	4	1	146	207	358	2.69e-28	108
MS.gene50298.t1	MTR_4g118370	50.388	129	57	4	19	144	133	257	3.02e-31	112
MS.gene50298.t1	MTR_4g117530	42.857	147	54	3	1	147	137	253	1.09e-30	111
MS.gene50298.t1	MTR_1g055250	42.963	135	72	4	1	134	123	253	2.45e-29	109
MS.gene50298.t1	MTR_7g079450	43.262	141	72	4	10	147	2	137	7.75e-29	103
MS.gene50298.t1	MTR_7g079400	44.595	148	68	5	10	147	194	337	7.85e-29	108
MS.gene50298.t1	MTR_7g079370	48.175	137	62	4	10	141	218	350	8.15e-29	108
MS.gene50298.t1	MTR_4g023100	83.636	55	9	0	93	147	65	119	5.96e-26	95.1
MS.gene50298.t1	MTR_8g102520	40.278	144	76	4	10	147	183	322	6.83e-26	100
MS.gene50298.t1	MTR_4g122860	48.438	128	56	5	27	147	196	320	7.63e-26	100
MS.gene50298.t1	MTR_7g117720	61.628	86	27	2	62	141	186	271	9.81e-25	96.3
MS.gene50298.t1	MTR_4g121580	48.739	119	50	4	21	137	230	339	1.30e-23	94.7
MS.gene50298.t1	MTR_4g122840	44.118	136	37	5	16	147	164	264	9.22e-22	88.2
MS.gene50298.t1	MTR_7g079420	39.073	151	77	6	6	147	1000	1144	4.37e-21	88.6
MS.gene50298.t1	MTR_8g098830	40.000	135	71	5	10	141	88	215	5.02e-21	85.5
MS.gene50298.t1	MTR_4g114700	50.515	97	41	2	49	138	122	218	2.58e-20	84.0
MS.gene50298.t1	MTR_2g048580	36.301	146	71	6	10	147	211	342	1.80e-18	80.5
MS.gene50298.t1	MTR_8g013005	62.712	59	20	1	91	147	1	59	1.36e-16	69.7
MS.gene50298.t1	MTR_2g064960	67.442	43	12	1	107	147	17	59	4.18e-12	58.2
MS.gene50298.t1	MTR_4g109290	62.264	53	18	1	97	147	136	188	7.94e-12	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 26 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAACCATTTACTTAATTC+TGG	0.247939	4.1:-75579630	MS.gene50298:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.267319	4.1:-75579596	MS.gene50298:CDS
ATGATAAAGGACAGCTATTA+AGG	0.278962	4.1:-75579386	MS.gene50298:CDS
ATAAGGATACAGTTGAAATA+TGG	0.287555	4.1:-75579560	MS.gene50298:CDS
AATTGTTGCCTTTGATTTAA+CGG	0.294431	4.1:-75579688	MS.gene50298:CDS
TTGTTTGAGATGCCTCTTCC+AGG	0.350585	4.1:-75579657	MS.gene50298:CDS
AGGAAATCTTAATTCTAGAT+TGG	0.414662	4.1:-75579418	MS.gene50298:CDS
CTATTAAGGCATCGCTCCTT+CGG	0.422078	4.1:-75579372	MS.gene50298:CDS
TTGGTCAAGTATAATGATAA+AGG	0.451105	4.1:-75579399	MS.gene50298:CDS
TAAACTTGCTCGTTGTCACC+AGG	0.464044	4.1:+75579300	None:intergenic
TAAGGATACAGTTGAAATAT+GGG	0.473963	4.1:-75579559	MS.gene50298:CDS
TTTCCTTTCCGTTAAATCAA+AGG	0.475134	4.1:+75579680	None:intergenic
TGGAGAATTTCTCAGTCTAT+GGG	0.489976	4.1:-75579595	MS.gene50298:CDS
AATACAAAGTGCATTCGTCT+TGG	0.503299	4.1:-75579527	MS.gene50298:CDS
ATGGGCTGTGGACTATGATA+AGG	0.510847	4.1:-75579577	MS.gene50298:CDS
ATAGGGTGAAAATAGCGATC+AGG	0.512584	4.1:+75579471	None:intergenic
GAGTCTCTACTTTCACTCCC+TGG	0.547203	4.1:-75579318	MS.gene50298:CDS
ATTTCTCAGTCTATGGGCTG+TGG	0.553738	4.1:-75579589	MS.gene50298:CDS
TTGCCTTTGATTTAACGGAA+AGG	0.569675	4.1:-75579683	MS.gene50298:CDS
TGGTTAAAATCACCTGGAAG+AGG	0.570122	4.1:+75579645	None:intergenic
GTGAAAATAGCGATCAGGAA+TGG	0.580924	4.1:+75579476	None:intergenic
AGTAAATGGTTAAAATCACC+TGG	0.587427	4.1:+75579639	None:intergenic
CTATGCGTCGTGATTTACGT+TGG	0.619317	4.1:-75579716	MS.gene50298:CDS
AAACTTGCTCGTTGTCACCA+GGG	0.636630	4.1:+75579301	None:intergenic
ATCGGATTGACTATTACCGA+AGG	0.667712	4.1:+75579356	None:intergenic
CTCTGTATACATGACAACAT+CGG	0.674049	4.1:+75579338	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAACCAGAATTAAGTAAA+TGG	+	chr4.1:75579397-75579416	None:intergenic	20.0%
!!	ACAAAAAATGGTGATATTAT+CGG	-	chr4.1:75579578-75579597	MS.gene50298:CDS	20.0%
!!	TTTAACCATTTACTTAATTC+TGG	-	chr4.1:75579389-75579408	MS.gene50298:CDS	20.0%
!!!	ATTTACTTAATTCTGGTTTT+TGG	-	chr4.1:75579396-75579415	MS.gene50298:CDS	20.0%
!!!	TTTACTTAATTCTGGTTTTT+GGG	-	chr4.1:75579397-75579416	MS.gene50298:CDS	20.0%
!	AGGAAATCTTAATTCTAGAT+TGG	-	chr4.1:75579601-75579620	MS.gene50298:CDS	25.0%
!	ATAAGGATACAGTTGAAATA+TGG	-	chr4.1:75579459-75579478	MS.gene50298:CDS	25.0%
!	TAAGGATACAGTTGAAATAT+GGG	-	chr4.1:75579460-75579479	MS.gene50298:CDS	25.0%
!	TTGGTCAAGTATAATGATAA+AGG	-	chr4.1:75579620-75579639	MS.gene50298:CDS	25.0%
!!	AATTGTTGCCTTTGATTTAA+CGG	-	chr4.1:75579331-75579350	MS.gene50298:CDS	25.0%
!!!	GATAATATCACCATTTTTTG+TGG	+	chr4.1:75579579-75579598	None:intergenic	25.0%
	AAAAATGGTGATATTATCGG+AGG	-	chr4.1:75579581-75579600	MS.gene50298:CDS	30.0%
	AGTAAATGGTTAAAATCACC+TGG	+	chr4.1:75579383-75579402	None:intergenic	30.0%
	ATGATAAAGGACAGCTATTA+AGG	-	chr4.1:75579633-75579652	MS.gene50298:CDS	30.0%
	TTTCCTTTCCGTTAAATCAA+AGG	+	chr4.1:75579342-75579361	None:intergenic	30.0%
!!!	AATTCTGGTTTTTGGGTATT+TGG	-	chr4.1:75579404-75579423	MS.gene50298:CDS	30.0%
!!!	CATTTTTTGTGGAGTACATA+GGG	+	chr4.1:75579568-75579587	None:intergenic	30.0%
	AATACAAAGTGCATTCGTCT+TGG	-	chr4.1:75579492-75579511	MS.gene50298:CDS	35.0%
	CCTATGTACTCCACAAAAAA+TGG	-	chr4.1:75579566-75579585	MS.gene50298:CDS	35.0%
	CTCTGTATACATGACAACAT+CGG	+	chr4.1:75579684-75579703	None:intergenic	35.0%
	TGGAGAATTTCTCAGTCTAT+GGG	-	chr4.1:75579424-75579443	MS.gene50298:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr4.1:75579423-75579442	MS.gene50298:CDS	35.0%
!	TTGCCTTTGATTTAACGGAA+AGG	-	chr4.1:75579336-75579355	MS.gene50298:CDS	35.0%
!!!	CCATTTTTTGTGGAGTACAT+AGG	+	chr4.1:75579569-75579588	None:intergenic	35.0%
	ATAGGGTGAAAATAGCGATC+AGG	+	chr4.1:75579551-75579570	None:intergenic	40.0%
	ATCGGATTGACTATTACCGA+AGG	+	chr4.1:75579666-75579685	None:intergenic	40.0%
	GTGAAAATAGCGATCAGGAA+TGG	+	chr4.1:75579546-75579565	None:intergenic	40.0%
	TGGTTAAAATCACCTGGAAG+AGG	+	chr4.1:75579377-75579396	None:intergenic	40.0%
	CTATGCGTCGTGATTTACGT+TGG	-	chr4.1:75579303-75579322	MS.gene50298:CDS	45.0%
!	AAACTTGCTCGTTGTCACCA+GGG	+	chr4.1:75579721-75579740	None:intergenic	45.0%
!	ATGGGCTGTGGACTATGATA+AGG	-	chr4.1:75579442-75579461	MS.gene50298:CDS	45.0%
!	ATTTCTCAGTCTATGGGCTG+TGG	-	chr4.1:75579430-75579449	MS.gene50298:CDS	45.0%
!	TAAACTTGCTCGTTGTCACC+AGG	+	chr4.1:75579722-75579741	None:intergenic	45.0%
!	TTGTTTGAGATGCCTCTTCC+AGG	-	chr4.1:75579362-75579381	MS.gene50298:CDS	45.0%
!!	CTATTAAGGCATCGCTCCTT+CGG	-	chr4.1:75579647-75579666	MS.gene50298:CDS	45.0%
	GAGTCTCTACTTTCACTCCC+TGG	-	chr4.1:75579701-75579720	MS.gene50298:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	75579299	75579742	75579299	ID=MS.gene50298
chr4.1	mRNA	75579299	75579742	75579299	ID=MS.gene50298.t1;Parent=MS.gene50298
chr4.1	exon	75579299	75579742	75579299	ID=MS.gene50298.t1.exon1;Parent=MS.gene50298.t1
chr4.1	CDS	75579299	75579742	75579299	ID=cds.MS.gene50298.t1;Parent=MS.gene50298.t1

Gene Sequence

>MS.gene50298

ATGGCTATGCGTCGTGATTTACGTTGGAATGTAATTGTTGCCTTTGATTTAACGGAAAGGAAATTGTTTGAGATGCCTCTTCCAGGTGATTTTAACCATTTACTTAATTCTGGTTTTTGGGTATTTGGAGAATTTCTCAGTCTATGGGCTGTGGACTATGATAAGGATACAGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCGTCTTGGAATAAAATTCTTGTTCTTTCTGTTCATGCCATTCCTGATCGCTATTTTCACCCTATGTACTCCACAAAAAATGGTGATATTATCGGAGGAAATCTTAATTCTAGATTGGTCAAGTATAATGATAAAGGACAGCTATTAAGGCATCGCTCCTTCGGTAATAGTCAATCCGATGTTGTCATGTATACAGAGTCTCTACTTTCACTCCCTGGTGACAACGAGCAAGTTTAA

Protein sequence

>MS.gene50298.t1

MAMRRDLRWNVIVAFDLTERKLFEMPLPGDFNHLLNSGFWVFGEFLSLWAVDYDKDTVEIWVMKEYKVHSSWNKILVLSVHAIPDRYFHPMYSTKNGDIIGGNLNSRLVKYNDKGQLLRHRSFGNSQSDVVMYTESLLSLPGDNEQV