AlfalfaGEDB | MS.gene51188

M. sativa cultivar XinJiangDaYe / MS.gene51188

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51188.t1	XP_024628923.1	79.5	210	43	0	2	211	16	225	4.90E-94	354

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51188.t1	G7L7F6	79.5	210	43	0	2	211	113	322	3.5e-94	354.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene51188	MS.gene51207	PPI
MS.gene24212	MS.gene51188	PPI
MS.gene51188	MS.gene58321	PPI
MS.gene51188	MS.gene87564	PPI
MS.gene51188	MS.gene36595	PPI
MS.gene051820	MS.gene51188	PPI
MS.gene035235	MS.gene51188	PPI
MS.gene81242	MS.gene51188	PPI
MS.gene26101	MS.gene51188	PPI
MS.gene27283	MS.gene51188	PPI
MS.gene51188	MS.gene061240	PPI
MS.gene64203	MS.gene51188	PPI
MS.gene045140	MS.gene51188	PPI
MS.gene51188	MS.gene041473	PPI
MS.gene024004	MS.gene51188	PPI
MS.gene42444	MS.gene51188	PPI
MS.gene51188	MS.gene50311	PPI
MS.gene51202	MS.gene51188	PPI
MS.gene059101	MS.gene51188	PPI
MS.gene51188	MS.gene058989	PPI
MS.gene87562	MS.gene51188	PPI
MS.gene066623	MS.gene51188	PPI
MS.gene51188	MS.gene57538	PPI
MS.gene51188	MS.gene041468	PPI
MS.gene51188	MS.gene058693	PPI
MS.gene51188	MS.gene041395	PPI
MS.gene51188	MS.gene42447	PPI
MS.gene51188	MS.gene51189	PPI
MS.gene064104	MS.gene51188	PPI
MS.gene041491	MS.gene51188	PPI
MS.gene033443	MS.gene51188	PPI
MS.gene50337	MS.gene51188	PPI
MS.gene51188	MS.gene044425	PPI
MS.gene43789	MS.gene51188	PPI
MS.gene059096	MS.gene51188	PPI
MS.gene57528	MS.gene51188	PPI
MS.gene006711	MS.gene51188	PPI
MS.gene51188	MS.gene40988	PPI
MS.gene27285	MS.gene51188	PPI
MS.gene072177	MS.gene51188	PPI
MS.gene064091	MS.gene51188	PPI
MS.gene51188	MS.gene24173	PPI
MS.gene064112	MS.gene51188	PPI
MS.gene045476	MS.gene51188	PPI
MS.gene24208	MS.gene51188	PPI
MS.gene50307	MS.gene51188	PPI
MS.gene24213	MS.gene51188	PPI
MS.gene51188	MS.gene27022	PPI
MS.gene43796	MS.gene51188	PPI
MS.gene044429	MS.gene51188	PPI
MS.gene58312	MS.gene51188	PPI
MS.gene51188	MS.gene87585	PPI
MS.gene51188	MS.gene023999	PPI
MS.gene51191	MS.gene51188	PPI
MS.gene51188	MS.gene036581	PPI
MS.gene51188	MS.gene019507	PPI
MS.gene51188	MS.gene035237	PPI
MS.gene44887	MS.gene51188	PPI
MS.gene85043	MS.gene51188	PPI
MS.gene033430	MS.gene51188	PPI
MS.gene51188	MS.gene000036	PPI
MS.gene51188	MS.gene50320	PPI
MS.gene036583	MS.gene51188	PPI
MS.gene88780	MS.gene51188	PPI
MS.gene51188	MS.gene58314	PPI
MS.gene51188	MS.gene87557	PPI
MS.gene055694	MS.gene51188	PPI
MS.gene51188	MS.gene035263	PPI
MS.gene51188	MS.gene053257	PPI
MS.gene71159	MS.gene51188	PPI
MS.gene51188	MS.gene51201	PPI
MS.gene96448	MS.gene51188	PPI
MS.gene77858	MS.gene51188	PPI
MS.gene041392	MS.gene51188	PPI
MS.gene51188	MS.gene50336	PPI
MS.gene033083	MS.gene51188	PPI
MS.gene63658	MS.gene51188	PPI
MS.gene51188	MS.gene77704	PPI
MS.gene033081	MS.gene51188	PPI
MS.gene031591	MS.gene51188	PPI
MS.gene51188	MS.gene047279	PPI
MS.gene035262	MS.gene51188	PPI
MS.gene51188	MS.gene50305	PPI
MS.gene51188	MS.gene032969	PPI
MS.gene51199	MS.gene51188	PPI
MS.gene51188	MS.gene68890	PPI
MS.gene57536	MS.gene51188	PPI
MS.gene019503	MS.gene51188	PPI
MS.gene51188	MS.gene42445	PPI
MS.gene51188	MS.gene86273	PPI
MS.gene51188	MS.gene036663	PPI
MS.gene87559	MS.gene51188	PPI
MS.gene51188	MS.gene26830	PPI
MS.gene033431	MS.gene51188	PPI
MS.gene51188	MS.gene63657	PPI
MS.gene51188	MS.gene059157	PPI
MS.gene51188	MS.gene023996	PPI
MS.gene041475	MS.gene51188	PPI
MS.gene31587	MS.gene51188	PPI
MS.gene033441	MS.gene51188	PPI
MS.gene51188	MS.gene045473	PPI
MS.gene51188	MS.gene50301	PPI
MS.gene51188	MS.gene070462	PPI
MS.gene51188	MS.gene031590	PPI
MS.gene063826	MS.gene51188	PPI
MS.gene060367	MS.gene51188	PPI
MS.gene51188	MS.gene066623	PPI
MS.gene44892	MS.gene51188	PPI
MS.gene51188	MS.gene064086	PPI
MS.gene51188	MS.gene035234	PPI
MS.gene51188	MS.gene064090	PPI
MS.gene58239	MS.gene51188	PPI
MS.gene000038	MS.gene51188	PPI
MS.gene51188	MS.gene90742	PPI
MS.gene57531	MS.gene51188	PPI
MS.gene064111	MS.gene51188	PPI
MS.gene51188	MS.gene24212	PPI
MS.gene51188	MS.gene50332	PPI
MS.gene51188	MS.gene024979	PPI
MS.gene26829	MS.gene51188	PPI
MS.gene39262	MS.gene51188	PPI
MS.gene053256	MS.gene51188	PPI
MS.gene025887	MS.gene51188	PPI
MS.gene019507	MS.gene51188	PPI
MS.gene75875	MS.gene51188	PPI
MS.gene041470	MS.gene51188	PPI
MS.gene058694	MS.gene51188	PPI
MS.gene064090	MS.gene51188	PPI
MS.gene51188	MS.gene24826	PPI
MS.gene51188	MS.gene063472	PPI
MS.gene54049	MS.gene51188	PPI
MS.gene51188	MS.gene43790	PPI
MS.gene015089	MS.gene51188	PPI
MS.gene006710	MS.gene51188	PPI
MS.gene58722	MS.gene51188	PPI
MS.gene51188	MS.gene59637	PPI
MS.gene011679	MS.gene51188	PPI
MS.gene033079	MS.gene51188	PPI
MS.gene64001	MS.gene51188	PPI
MS.gene51188	MS.gene88416	PPI
MS.gene57533	MS.gene51188	PPI
MS.gene51188	MS.gene003076	PPI
MS.gene36704	MS.gene51188	PPI
MS.gene032970	MS.gene51188	PPI
MS.gene51188	MS.gene024009	PPI
MS.gene51188	MS.gene036599	PPI
MS.gene77856	MS.gene51188	PPI
MS.gene036556	MS.gene51188	PPI
MS.gene58313	MS.gene51188	PPI
MS.gene51188	MS.gene006705	PPI
MS.gene51188	MS.gene061241	PPI
MS.gene066622	MS.gene51188	PPI
MS.gene39265	MS.gene51188	PPI
MS.gene63655	MS.gene51188	PPI
MS.gene44883	MS.gene51188	PPI
MS.gene51188	MS.gene38220	PPI
MS.gene51188	MS.gene40986	PPI
MS.gene41046	MS.gene51188	PPI
MS.gene51188	MS.gene041394	PPI
MS.gene87588	MS.gene51188	PPI
MS.gene017412	MS.gene51188	PPI
MS.gene51188	MS.gene03060	PPI
MS.gene51188	MS.gene036664	PPI
MS.gene51188	MS.gene024011	PPI
MS.gene80884	MS.gene51188	PPI
MS.gene51188	MS.gene58241	PPI
MS.gene51188	MS.gene064109	PPI
MS.gene51192	MS.gene51188	PPI
MS.gene51188	MS.gene058696	PPI
MS.gene009883	MS.gene51188	PPI
MS.gene51188	MS.gene009893	PPI
MS.gene58317	MS.gene51188	PPI
MS.gene40886	MS.gene51188	PPI
MS.gene044563	MS.gene51188	PPI
MS.gene069075	MS.gene51188	PPI
MS.gene033427	MS.gene51188	PPI
MS.gene40985	MS.gene51188	PPI
MS.gene041474	MS.gene51188	PPI
MS.gene27020	MS.gene51188	PPI
MS.gene066620	MS.gene51188	PPI
MS.gene58321	MS.gene51188	PPI
MS.gene041388	MS.gene51188	PPI
MS.gene062698	MS.gene51188	PPI
MS.gene51188	MS.gene40886	PPI
MS.gene96126	MS.gene51188	PPI
MS.gene51208	MS.gene51188	PPI
MS.gene016524	MS.gene51188	PPI
MS.gene50304	MS.gene51188	PPI
MS.gene51188	MS.gene68580	PPI
MS.gene51188	MS.gene041391	PPI
MS.gene045475	MS.gene51188	PPI
MS.gene88776	MS.gene51188	PPI
MS.gene51188	MS.gene57525	PPI
MS.gene59943	MS.gene51188	PPI
MS.gene90744	MS.gene51188	PPI
MS.gene51204	MS.gene51188	PPI
MS.gene51188	MS.gene030114	PPI
MS.gene036557	MS.gene51188	PPI
MS.gene041393	MS.gene51188	PPI
MS.gene50329	MS.gene51188	PPI
MS.gene51188	MS.gene045474	PPI
MS.gene51188	MS.gene036558	PPI
MS.gene57537	MS.gene51188	PPI
MS.gene51188	MS.gene87554	PPI
MS.gene059156	MS.gene51188	PPI
MS.gene51188	MS.gene40984	PPI
MS.gene84698	MS.gene51188	PPI
MS.gene51188	MS.gene064108	PPI
MS.gene51188	MS.gene048193	PPI
MS.gene51188	MS.gene016220	PPI
MS.gene009891	MS.gene51188	PPI
MS.gene066641	MS.gene51188	PPI
MS.gene82082	MS.gene51188	PPI
MS.gene57535	MS.gene51188	PPI
MS.gene51188	MS.gene58240	PPI
MS.gene51188	MS.gene27284	PPI
MS.gene87200	MS.gene51188	PPI
MS.gene058701	MS.gene51188	PPI
MS.gene51188	MS.gene57717	PPI
MS.gene51188	MS.gene034680	PPI
MS.gene51188	MS.gene48221	PPI
MS.gene90743	MS.gene51188	PPI
MS.gene51188	MS.gene066626	PPI
MS.gene44885	MS.gene51188	PPI
MS.gene51188	MS.gene063474	PPI
MS.gene060370	MS.gene51188	PPI
MS.gene51188	MS.gene51190	PPI
MS.gene50327	MS.gene51188	PPI
MS.gene51188	MS.gene58319	PPI
MS.gene066635	MS.gene51188	PPI
MS.gene51188	MS.gene044426	PPI
MS.gene51188	MS.gene034681	PPI
MS.gene51188	MS.gene57532	PPI
MS.gene010758	MS.gene51188	PPI
MS.gene51188	MS.gene033442	PPI
MS.gene87586	MS.gene51188	PPI
MS.gene51188	MS.gene009892	PPI
MS.gene51200	MS.gene51188	PPI
MS.gene40887	MS.gene51188	PPI
MS.gene50339	MS.gene51188	PPI
MS.gene51188	MS.gene44428	PPI
MS.gene51188	MS.gene058669	PPI
MS.gene046958	MS.gene51188	PPI
MS.gene51188	MS.gene066120	PPI
MS.gene034688	MS.gene51188	PPI
MS.gene060366	MS.gene51188	PPI
MS.gene51188	MS.gene035235	PPI
MS.gene88774	MS.gene51188	PPI
MS.gene51188	MS.gene041489	PPI
MS.gene51188	MS.gene024000	PPI
MS.gene51188	MS.gene034688	PPI
MS.gene42452	MS.gene51188	PPI
MS.gene57529	MS.gene51188	PPI
MS.gene51188	MS.gene24213	PPI
MS.gene063414	MS.gene51188	PPI
MS.gene51188	MS.gene033079	PPI
MS.gene51188	MS.gene034677	PPI
MS.gene51188	MS.gene055694	PPI
MS.gene51188	MS.gene059101	PPI
MS.gene51188	MS.gene035238	PPI
MS.gene40902	MS.gene51188	PPI
MS.gene51188	MS.gene064114	PPI
MS.gene57526	MS.gene51188	PPI
MS.gene51188	MS.gene87584	PPI
MS.gene27051	MS.gene51188	PPI
MS.gene021553	MS.gene51188	PPI
MS.gene51188	MS.gene58315	PPI
MS.gene26957	MS.gene51188	PPI
MS.gene060368	MS.gene51188	PPI
MS.gene033875	MS.gene51188	PPI
MS.gene97996	MS.gene51188	PPI
MS.gene51188	MS.gene80610	PPI
MS.gene036582	MS.gene51188	PPI
MS.gene27021	MS.gene51188	PPI
MS.gene035236	MS.gene51188	PPI
MS.gene58320	MS.gene51188	PPI
MS.gene51188	MS.gene90743	PPI
MS.gene059157	MS.gene51188	PPI
MS.gene58781	MS.gene51188	PPI
MS.gene57717	MS.gene51188	PPI
MS.gene028390	MS.gene51188	PPI
MS.gene011106	MS.gene51188	PPI
MS.gene51188	MS.gene85454	PPI
MS.gene033440	MS.gene51188	PPI
MS.gene62398	MS.gene51188	PPI
MS.gene60027	MS.gene51188	PPI
MS.gene51188	MS.gene036556	PPI
MS.gene44886	MS.gene51188	PPI
MS.gene038756	MS.gene51188	PPI
MS.gene40904	MS.gene51188	PPI
MS.gene51188	MS.gene27319	PPI
MS.gene35068	MS.gene51188	PPI
MS.gene041390	MS.gene51188	PPI
MS.gene24286	MS.gene51188	PPI
MS.gene92376	MS.gene51188	PPI
MS.gene000035	MS.gene51188	PPI
MS.gene070462	MS.gene51188	PPI
MS.gene87569	MS.gene51188	PPI
MS.gene31637	MS.gene51188	PPI
MS.gene87573	MS.gene51188	PPI
MS.gene51188	MS.gene058701	PPI
MS.gene019504	MS.gene51188	PPI
MS.gene034762	MS.gene51188	PPI
MS.gene51188	MS.gene064083	PPI
MS.gene50297	MS.gene51188	PPI
MS.gene51188	MS.gene58783	PPI
MS.gene51188	MS.gene024420	PPI
MS.gene51188	MS.gene024008	PPI
MS.gene51188	MS.gene50337	PPI
MS.gene58716	MS.gene51188	PPI
MS.gene68580	MS.gene51188	PPI
MS.gene033444	MS.gene51188	PPI
MS.gene51188	MS.gene54541	PPI
MS.gene51188	MS.gene39265	PPI
MS.gene019505	MS.gene51188	PPI
MS.gene51188	MS.gene036584	PPI
MS.gene50306	MS.gene51188	PPI
MS.gene58785	MS.gene51188	PPI
MS.gene51188	MS.gene053299	PPI
MS.gene034690	MS.gene51188	PPI
MS.gene51188	MS.gene28758	PPI
MS.gene51188	MS.gene044429	PPI
MS.gene066639	MS.gene51188	PPI
MS.gene51188	MS.gene42451	PPI
MS.gene26949	MS.gene51188	PPI
MS.gene96407	MS.gene51188	PPI
MS.gene50309	MS.gene51188	PPI
MS.gene036760	MS.gene51188	PPI
MS.gene77857	MS.gene51188	PPI
MS.gene58311	MS.gene51188	PPI
MS.gene51188	MS.gene69307	PPI
MS.gene57527	MS.gene51188	PPI
MS.gene033432	MS.gene51188	PPI
MS.gene033426	MS.gene51188	PPI
MS.gene59639	MS.gene51188	PPI
MS.gene50298	MS.gene51188	PPI
MS.gene67687	MS.gene51188	PPI
MS.gene035261	MS.gene51188	PPI
MS.gene063670	MS.gene51188	PPI
MS.gene51188	MS.gene67501	PPI
MS.gene51188	MS.gene96406	PPI
MS.gene57530	MS.gene51188	PPI
MS.gene066626	MS.gene51188	PPI
MS.gene019506	MS.gene51188	PPI
MS.gene50326	MS.gene51188	PPI
MS.gene058692	MS.gene51188	PPI
MS.gene51188	MS.gene40878	PPI
MS.gene69309	MS.gene51188	PPI
MS.gene024002	MS.gene51188	PPI
MS.gene51188	MS.gene058703	PPI
MS.gene034686	MS.gene51188	PPI
MS.gene51188	MS.gene012215	PPI
MS.gene40982	MS.gene51188	PPI
MS.gene070461	MS.gene51188	PPI
MS.gene51188	MS.gene22715	PPI
MS.gene036662	MS.gene51188	PPI
MS.gene51188	MS.gene58316	PPI
MS.gene87563	MS.gene51188	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51188.t1	MTR_8g102520	79.524	210	43	0	2	211	113	322	1.77e-122	350
MS.gene51188.t1	MTR_7g079400	63.256	215	75	1	1	211	123	337	1.96e-92	274
MS.gene51188.t1	MTR_8g098830	71.176	170	48	1	16	185	32	200	4.63e-84	249
MS.gene51188.t1	MTR_7g079370	53.302	212	95	3	1	209	144	354	2.78e-67	211
MS.gene51188.t1	MTR_7g079450	70.714	140	37	1	72	211	2	137	8.28e-66	199
MS.gene51188.t1	MTR_2g048580	50.463	216	86	6	4	211	140	342	5.78e-60	191
MS.gene51188.t1	MTR_7g079420	56.044	182	70	5	36	211	967	1144	7.19e-56	191
MS.gene51188.t1	MTR_4g117720	45.161	217	99	9	1	207	167	373	3.34e-47	159
MS.gene51188.t1	MTR_1g055175	45.178	197	100	6	19	211	9	201	2.60e-44	147
MS.gene51188.t1	MTR_6g060650	45.000	200	95	7	16	210	183	372	1.82e-43	149
MS.gene51188.t1	MTR_1g055195	44.330	194	99	5	19	206	283	473	4.62e-39	140
MS.gene51188.t1	MTR_5g070130	42.132	197	104	6	19	207	178	372	4.76e-39	138
MS.gene51188.t1	MTR_5g070080	43.005	193	99	6	19	207	196	381	4.88e-39	138
MS.gene51188.t1	MTR_4g109280	43.939	198	98	8	19	211	170	359	2.67e-38	135
MS.gene51188.t1	MTR_5g097210	41.579	190	104	5	19	206	174	358	5.32e-38	135
MS.gene51188.t1	MTR_8g433030	43.662	213	104	9	1	207	136	338	2.39e-37	132
MS.gene51188.t1	MTR_8g032390	43.662	213	104	9	1	207	169	371	5.42e-37	132
MS.gene51188.t1	MTR_4g116320	40.314	191	103	6	19	205	69	252	9.40e-37	129
MS.gene51188.t1	MTR_5g070088	40.415	193	106	5	19	207	194	381	1.15e-36	132
MS.gene51188.t1	MTR_3g103020	42.365	203	97	7	19	211	186	378	1.55e-36	131
MS.gene51188.t1	MTR_4g094365	42.786	201	103	7	16	211	171	364	2.15e-36	130
MS.gene51188.t1	MTR_1g055135	41.753	194	110	2	21	211	182	375	2.68e-36	130
MS.gene51188.t1	MTR_4g109270	42.381	210	103	8	12	211	163	364	2.85e-36	130
MS.gene51188.t1	MTR_8g040935	41.000	200	106	7	19	211	14	208	3.04e-36	126
MS.gene51188.t1	MTR_4g118380	41.053	190	98	5	1	181	171	355	1.08e-35	129
MS.gene51188.t1	MTR_4g118400	39.691	194	92	7	16	205	122	294	1.09e-35	127
MS.gene51188.t1	MTR_4g117750	42.211	199	105	4	19	210	163	358	1.60e-35	130
MS.gene51188.t1	MTR_4g117750	40.909	110	52	4	104	205	373	477	4.52e-13	67.8
MS.gene51188.t1	MTR_1g055165	45.783	166	82	6	50	211	157	318	6.71e-35	125
MS.gene51188.t1	MTR_4g116330	43.216	199	100	7	19	211	189	380	2.40e-34	125
MS.gene51188.t1	MTR_4g118370	40.741	189	90	4	19	206	88	255	3.69e-34	122
MS.gene51188.t1	MTR_1g055250	40.659	182	100	5	19	198	78	253	1.23e-33	122
MS.gene51188.t1	MTR_4g023130	38.860	193	104	6	16	204	124	306	1.33e-32	120
MS.gene51188.t1	MTR_4g023080	38.860	193	104	6	16	204	165	347	1.96e-32	120
MS.gene51188.t1	MTR_4g117850	40.816	196	104	7	19	207	186	376	2.76e-32	120
MS.gene51188.t1	MTR_3g034180	40.000	205	104	7	16	210	293	488	5.88e-32	121
MS.gene51188.t1	MTR_6g463430	39.901	203	107	8	9	205	3	196	8.45e-32	115
MS.gene51188.t1	MTR_4g122850	36.493	211	125	9	6	211	158	364	2.99e-31	117
MS.gene51188.t1	MTR_3g034160	40.594	202	97	8	16	205	179	369	4.93e-31	117
MS.gene51188.t1	MTR_4g021785	38.500	200	110	6	16	211	165	355	1.44e-30	115
MS.gene51188.t1	MTR_4g117530	35.859	198	85	6	17	211	95	253	7.71e-30	111
MS.gene51188.t1	MTR_3g034130	37.989	179	94	6	16	184	179	350	1.72e-29	112
MS.gene51188.t1	MTR_4g117770	39.801	201	112	6	16	211	171	367	1.37e-28	110
MS.gene51188.t1	MTR_4g117810	39.801	201	112	6	16	211	171	367	1.37e-28	110
MS.gene51188.t1	MTR_4g023070	36.323	223	113	9	1	204	151	363	9.74e-28	108
MS.gene51188.t1	MTR_4g118360	45.000	120	65	1	87	205	1	120	1.22e-27	102
MS.gene51188.t1	MTR_4g023120	36.323	223	113	9	1	204	151	363	1.72e-27	107
MS.gene51188.t1	MTR_4g117780	38.384	198	113	6	19	211	174	367	2.20e-27	107
MS.gene51188.t1	MTR_8g433040	38.049	205	102	7	13	211	179	364	3.32e-27	106
MS.gene51188.t1	MTR_8g032380	38.049	205	102	7	13	211	179	364	3.32e-27	106
MS.gene51188.t1	MTR_4g023090	34.529	223	115	9	1	205	169	378	4.31e-27	106
MS.gene51188.t1	MTR_4g023380	33.333	213	106	7	19	205	169	371	1.38e-24	99.8
MS.gene51188.t1	MTR_4g023190	34.500	200	110	8	15	205	166	353	1.46e-23	96.7
MS.gene51188.t1	MTR_4g023440	34.135	208	89	7	6	211	171	332	3.67e-23	95.1
MS.gene51188.t1	MTR_4g117870	32.308	195	89	6	19	211	114	267	5.31e-22	90.9
MS.gene51188.t1	MTR_4g023150	33.500	200	113	9	15	205	166	354	1.01e-20	89.0
MS.gene51188.t1	MTR_4g023200	32.308	195	112	8	20	205	171	354	5.56e-20	86.7
MS.gene51188.t1	MTR_4g116330	36.683	199	74	8	19	211	189	341	6.29e-20	86.7
MS.gene51188.t1	MTR_5g023000	44.681	94	49	2	120	211	7	99	4.36e-19	79.0
MS.gene51188.t1	MTR_4g122860	31.683	202	88	11	23	211	156	320	5.21e-16	75.5
MS.gene51188.t1	MTR_4g117430	44.706	85	39	3	12	93	55	134	7.15e-16	72.0
MS.gene51188.t1	MTR_4g114700	31.053	190	73	5	19	202	81	218	5.19e-15	71.6
MS.gene51188.t1	MTR_7g117720	38.017	121	65	5	94	206	154	272	1.78e-14	70.5
MS.gene51188.t1	MTR_8g013010	44.898	98	44	4	16	113	222	309	2.30e-14	70.9
MS.gene51188.t1	MTR_4g121580	31.217	189	95	8	16	201	183	339	2.49e-13	68.2
MS.gene51188.t1	MTR_6g021880	30.065	153	93	6	5	154	190	331	2.12e-11	62.8
MS.gene51188.t1	MTR_0267s0050	31.343	134	72	5	52	166	214	346	7.36e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 55 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTATTGCCTATGATTTAA+AGG	0.152459	7.3:-27678837	MS.gene51188:CDS
TTATGATTTGTCGGTATTTC+GGG	0.165211	7.3:-27678753	MS.gene51188:CDS
TCGATTCTGATTTGCCTTAT+AGG	0.216443	7.3:-27678955	MS.gene51188:CDS
AGATGATTACATGGTAGTTT+TGG	0.233203	7.3:-27679065	None:intergenic
TTTATGATTTGTCGGTATTT+CGG	0.241268	7.3:-27678754	MS.gene51188:CDS
TGTCATTTCCTTTAAATCAT+AGG	0.293726	7.3:+27678829	None:intergenic
TCTTGAATGGTTCTATTCAT+TGG	0.308230	7.3:-27678892	MS.gene51188:CDS
GGCAATAATAACATCGCTTC+TGG	0.326605	7.3:+27678850	None:intergenic
GATCTTGCAGTCTTCCTATA+AGG	0.341764	7.3:+27678941	None:intergenic
CCACCATTTGTAAAGCATAC+TGG	0.355517	7.3:+27678605	None:intergenic
TACTGACATTTATGATTTGT+CGG	0.363718	7.3:-27678762	MS.gene51188:CDS
CTGCTACAATATCACACTTA+TGG	0.375959	7.3:-27678524	MS.gene51188:CDS
AAGCATACTGGGCAAAATTC+CGG	0.382167	7.3:+27678617	None:intergenic
GAATGGTTCTATTCATTGGC+TGG	0.382596	7.3:-27678888	MS.gene51188:CDS
CTCTGTATACACTGCCAATT+GGG	0.382842	7.3:+27678481	None:intergenic
AGATGTCTACACTTAAGATA+TGG	0.412369	7.3:-27678706	MS.gene51188:CDS
AGAGTTGGGTCGTTCTTGAA+TGG	0.415164	7.3:-27678905	MS.gene51188:CDS
TAAGCTTGCTCAATGCCATC+AGG	0.418945	7.3:+27678443	None:intergenic
TTCGGGGACTTATCAGTGTA+TGG	0.420938	7.3:-27678736	MS.gene51188:CDS
AATACGCAGTGGATTCATCT+TGG	0.434045	7.3:-27678673	MS.gene51188:CDS
ACTCTGTATACACTGCCAAT+TGG	0.448336	7.3:+27678480	None:intergenic
ATTCAAGAACGACCCAACTC+TGG	0.455029	7.3:+27678907	None:intergenic
CTCAAAGTGGTCCCAGAGTT+GGG	0.460044	7.3:-27678919	MS.gene51188:CDS
AATGTCAGAGATTGGTCTTC+CGG	0.464561	7.3:-27678807	MS.gene51188:CDS
ACAAATGGTGGTGATATTGT+TGG	0.467745	7.3:-27678593	MS.gene51188:CDS
TGCCCAGTATGCTTTACAAA+TGG	0.476784	7.3:-27678608	MS.gene51188:CDS
TTACTTTGCAAGATCCCAAT+TGG	0.477110	7.3:-27678495	MS.gene51188:CDS
GAAATGACAATGTCAGAGAT+TGG	0.479009	7.3:-27678815	MS.gene51188:CDS
CACCATTTGTAAAGCATACT+GGG	0.492872	7.3:+27678606	None:intergenic
CATAAGTGTGATATTGTAGC+AGG	0.499903	7.3:+27678525	None:intergenic
CACCGTAGGATTGAATTTGT+AGG	0.507591	7.3:+27679039	None:intergenic
ATTGTTGGACCAGTTGCTGA+TGG	0.507743	7.3:-27678578	MS.gene51188:CDS
TCTCAAAGTGGTCCCAGAGT+TGG	0.515829	7.3:-27678920	MS.gene51188:CDS
GATGTCTACACTTAAGATAT+GGG	0.517647	7.3:-27678705	MS.gene51188:CDS
ACTGGGCAAAATTCCGGAGC+GGG	0.526424	7.3:+27678623	None:intergenic
AAATCGATATCGAAATCATC+CGG	0.539717	7.3:+27678788	None:intergenic
TTCAAGAACGACCCAACTCT+GGG	0.547729	7.3:+27678908	None:intergenic
TTGTTGGACCAGTTGCTGAT+GGG	0.547888	7.3:-27678577	MS.gene51188:CDS
TTAGCAAAGCTTGATGATGA+AGG	0.551202	7.3:-27678551	MS.gene51188:CDS
GTCCTACAAATTCAATCCTA+CGG	0.566267	7.3:-27679041	MS.gene51188:CDS
TCTCTGCTTTCACTCCCTGA+TGG	0.577136	7.3:-27678458	MS.gene51188:CDS
GGTGTGTTGTTCAATTGACT+TGG	0.583610	7.3:-27679020	MS.gene51188:CDS
CTCATTGAGAGCTAATGAGT+GGG	0.584146	7.3:-27678990	MS.gene51188:CDS
TCTCATTGAGAGCTAATGAG+TGG	0.598081	7.3:-27678991	MS.gene51188:CDS
CTACAATATCACACTTATGG+TGG	0.606381	7.3:-27678521	MS.gene51188:CDS
TGTTGGACCAGTTGCTGATG+GGG	0.607771	7.3:-27678576	MS.gene51188:CDS
GTTGGACCAGTTGCTGATGG+GGG	0.609659	7.3:-27678575	MS.gene51188:CDS
CCAGTATGCTTTACAAATGG+TGG	0.609815	7.3:-27678605	MS.gene51188:CDS
AAGCTTGCTCAATGCCATCA+GGG	0.614477	7.3:+27678444	None:intergenic
ACTTATCAGTGTATGGAATG+TGG	0.619206	7.3:-27678729	MS.gene51188:CDS
TATGATTTGTCGGTATTTCG+GGG	0.643494	7.3:-27678752	MS.gene51188:CDS
TCAATTGAACAACACACCGT+AGG	0.657645	7.3:+27679025	None:intergenic
TACTGGGCAAAATTCCGGAG+CGG	0.672001	7.3:+27678622	None:intergenic
GGTGATGCAAGAATACGCAG+TGG	0.726589	7.3:-27678684	MS.gene51188:CDS
AAGACTGCAAGATCTCAAAG+TGG	0.731177	7.3:-27678932	MS.gene51188:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTATTGCCTATGATTTAA+AGG	-	chr7.3:27678660-27678679	MS.gene51188:CDS	20.0%
!!	TACTGACATTTATGATTTGT+CGG	-	chr7.3:27678735-27678754	MS.gene51188:CDS	25.0%
!!	TGTCATTTCCTTTAAATCAT+AGG	+	chr7.3:27678671-27678690	None:intergenic	25.0%
!!	TTTATGATTTGTCGGTATTT+CGG	-	chr7.3:27678743-27678762	MS.gene51188:CDS	25.0%
	AAATCGATATCGAAATCATC+CGG	+	chr7.3:27678712-27678731	None:intergenic	30.0%
	AGATGTCTACACTTAAGATA+TGG	-	chr7.3:27678791-27678810	MS.gene51188:CDS	30.0%
	GATGTCTACACTTAAGATAT+GGG	-	chr7.3:27678792-27678811	MS.gene51188:CDS	30.0%
!	TCTTGAATGGTTCTATTCAT+TGG	-	chr7.3:27678605-27678624	MS.gene51188:CDS	30.0%
!	TTATGATTTGTCGGTATTTC+GGG	-	chr7.3:27678744-27678763	MS.gene51188:CDS	30.0%
	ACTTATCAGTGTATGGAATG+TGG	-	chr7.3:27678768-27678787	MS.gene51188:CDS	35.0%
	CACCATTTGTAAAGCATACT+GGG	+	chr7.3:27678894-27678913	None:intergenic	35.0%
	CATAAGTGTGATATTGTAGC+AGG	+	chr7.3:27678975-27678994	None:intergenic	35.0%
	CTACAATATCACACTTATGG+TGG	-	chr7.3:27678976-27678995	MS.gene51188:CDS	35.0%
	CTGCTACAATATCACACTTA+TGG	-	chr7.3:27678973-27678992	MS.gene51188:CDS	35.0%
	GAAATGACAATGTCAGAGAT+TGG	-	chr7.3:27678682-27678701	MS.gene51188:CDS	35.0%
	GTCCTACAAATTCAATCCTA+CGG	-	chr7.3:27678456-27678475	MS.gene51188:CDS	35.0%
	TTACTTTGCAAGATCCCAAT+TGG	-	chr7.3:27679002-27679021	MS.gene51188:CDS	35.0%
!	ACAAATGGTGGTGATATTGT+TGG	-	chr7.3:27678904-27678923	MS.gene51188:CDS	35.0%
!	TATGATTTGTCGGTATTTCG+GGG	-	chr7.3:27678745-27678764	MS.gene51188:CDS	35.0%
!	TCGATTCTGATTTGCCTTAT+AGG	-	chr7.3:27678542-27678561	MS.gene51188:CDS	35.0%
!!	TTAGCAAAGCTTGATGATGA+AGG	-	chr7.3:27678946-27678965	MS.gene51188:CDS	35.0%
!!!	TTTTAATTTTGAACCCGCTC+CGG	-	chr7.3:27678861-27678880	MS.gene51188:CDS	35.0%
	AAGACTGCAAGATCTCAAAG+TGG	-	chr7.3:27678565-27678584	MS.gene51188:CDS	40.0%
	AAGCATACTGGGCAAAATTC+CGG	+	chr7.3:27678883-27678902	None:intergenic	40.0%
	ACTCTGTATACACTGCCAAT+TGG	+	chr7.3:27679020-27679039	None:intergenic	40.0%
	CACCGTAGGATTGAATTTGT+AGG	+	chr7.3:27678461-27678480	None:intergenic	40.0%
	CCACCATTTGTAAAGCATAC+TGG	+	chr7.3:27678895-27678914	None:intergenic	40.0%
	CCAGTATGCTTTACAAATGG+TGG	-	chr7.3:27678892-27678911	MS.gene51188:CDS	40.0%
	CTCATTGAGAGCTAATGAGT+GGG	-	chr7.3:27678507-27678526	MS.gene51188:CDS	40.0%
	CTCTGTATACACTGCCAATT+GGG	+	chr7.3:27679019-27679038	None:intergenic	40.0%
	GATCTTGCAGTCTTCCTATA+AGG	+	chr7.3:27678559-27678578	None:intergenic	40.0%
	GGCAATAATAACATCGCTTC+TGG	+	chr7.3:27678650-27678669	None:intergenic	40.0%
	TCAATTGAACAACACACCGT+AGG	+	chr7.3:27678475-27678494	None:intergenic	40.0%
	TCTCATTGAGAGCTAATGAG+TGG	-	chr7.3:27678506-27678525	MS.gene51188:CDS	40.0%
	TGCCCAGTATGCTTTACAAA+TGG	-	chr7.3:27678889-27678908	MS.gene51188:CDS	40.0%
!	AATACGCAGTGGATTCATCT+TGG	-	chr7.3:27678824-27678843	MS.gene51188:CDS	40.0%
!	GAATGGTTCTATTCATTGGC+TGG	-	chr7.3:27678609-27678628	MS.gene51188:CDS	40.0%
!	GGTGTGTTGTTCAATTGACT+TGG	-	chr7.3:27678477-27678496	MS.gene51188:CDS	40.0%
!!	AATGTCAGAGATTGGTCTTC+CGG	-	chr7.3:27678690-27678709	MS.gene51188:CDS	40.0%
	AGAGTTGGGTCGTTCTTGAA+TGG	-	chr7.3:27678592-27678611	MS.gene51188:CDS	45.0%
	ATTCAAGAACGACCCAACTC+TGG	+	chr7.3:27678593-27678612	None:intergenic	45.0%
	ATTGTTGGACCAGTTGCTGA+TGG	-	chr7.3:27678919-27678938	MS.gene51188:CDS	45.0%
	TTCAAGAACGACCCAACTCT+GGG	+	chr7.3:27678592-27678611	None:intergenic	45.0%
	TTCGGGGACTTATCAGTGTA+TGG	-	chr7.3:27678761-27678780	MS.gene51188:CDS	45.0%
	TTGTTGGACCAGTTGCTGAT+GGG	-	chr7.3:27678920-27678939	MS.gene51188:CDS	45.0%
!	AAGCTTGCTCAATGCCATCA+GGG	+	chr7.3:27679056-27679075	None:intergenic	45.0%
!	TAAGCTTGCTCAATGCCATC+AGG	+	chr7.3:27679057-27679076	None:intergenic	45.0%
	CTCAAAGTGGTCCCAGAGTT+GGG	-	chr7.3:27678578-27678597	MS.gene51188:CDS	50.0%
	GGTGATGCAAGAATACGCAG+TGG	-	chr7.3:27678813-27678832	MS.gene51188:CDS	50.0%
	TACTGGGCAAAATTCCGGAG+CGG	+	chr7.3:27678878-27678897	None:intergenic	50.0%
	TCTCAAAGTGGTCCCAGAGT+TGG	-	chr7.3:27678577-27678596	MS.gene51188:CDS	50.0%
	TCTCTGCTTTCACTCCCTGA+TGG	-	chr7.3:27679039-27679058	MS.gene51188:CDS	50.0%
	TGTTGGACCAGTTGCTGATG+GGG	-	chr7.3:27678921-27678940	MS.gene51188:CDS	50.0%
	ACTGGGCAAAATTCCGGAGC+GGG	+	chr7.3:27678877-27678896	None:intergenic	55.0%
	GCTAATCCCCCATCAGCAAC+TGG	+	chr7.3:27678931-27678950	None:intergenic	55.0%
	GTTGGACCAGTTGCTGATGG+GGG	-	chr7.3:27678922-27678941	MS.gene51188:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	27678442	27679077	27678442	ID=MS.gene51188
chr7.3	mRNA	27678442	27679077	27678442	ID=MS.gene51188.t1;Parent=MS.gene51188
chr7.3	exon	27678442	27679077	27678442	ID=MS.gene51188.t1.exon1;Parent=MS.gene51188.t1
chr7.3	CDS	27678442	27679077	27678442	ID=cds.MS.gene51188.t1;Parent=MS.gene51188.t1

Gene Sequence

>MS.gene51188

ATGGTAGTTTTGGGGTCCTACAAATTCAATCCTACGGTGTGTTGTTCAATTGACTTGGAGATTTTCTCATTGAGAGCTAATGAGTGGGAAGAAATTGAGTTCGATTCTGATTTGCCTTATAGGAAGACTGCAAGATCTCAAAGTGGTCCCAGAGTTGGGTCGTTCTTGAATGGTTCTATTCATTGGCTGGTTTATAATTATGAGACCAGAAGCGATGTTATTATTGCCTATGATTTAAAGGAAATGACAATGTCAGAGATTGGTCTTCCGGATGATTTCGATATCGATTTTTCTACTGACATTTATGATTTGTCGGTATTTCGGGGACTTATCAGTGTATGGAATGTGGAGATGTCTACACTTAAGATATGGGTGATGCAAGAATACGCAGTGGATTCATCTTGGATTAAGACTCTTGATTTTAATTTTGAACCCGCTCCGGAATTTTGCCCAGTATGCTTTACAAATGGTGGTGATATTGTTGGACCAGTTGCTGATGGGGGATTAGCAAAGCTTGATGATGAAGGAGACCTGCTACAATATCACACTTATGGTGGCTGTTACTTTGCAAGATCCCAATTGGCAGTGTATACAGAGTCTCTGCTTTCACTCCCTGATGGCATTGAGCAAGCTTAA

Protein sequence

>MS.gene51188.t1

MVVLGSYKFNPTVCCSIDLEIFSLRANEWEEIEFDSDLPYRKTARSQSGPRVGSFLNGSIHWLVYNYETRSDVIIAYDLKEMTMSEIGLPDDFDIDFSTDIYDLSVFRGLISVWNVEMSTLKIWVMQEYAVDSSWIKTLDFNFEPAPEFCPVCFTNGGDIVGPVADGGLAKLDDEGDLLQYHTYGGCYFARSQLAVYTESLLSLPDGIEQA