Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036557.t1 | AES91738.2 | 70.9 | 357 | 68 | 2 | 1 | 321 | 1 | 357 | 2.90E-136 | 495 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036557.t1 | Q9LIR8 | 26.0 | 312 | 167 | 11 | 5 | 275 | 11 | 299 | 1.0e-09 | 65.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036557.t1 | G7JHV9 | 70.9 | 357 | 68 | 2 | 1 | 321 | 1 | 357 | 2.1e-136 | 495.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036557.t1 | MTR_4g118380 | 76.751 | 357 | 47 | 2 | 1 | 321 | 1 | 357 | 0.0 | 512 |
MS.gene036557.t1 | MTR_6g060650 | 67.553 | 376 | 79 | 2 | 1 | 342 | 1 | 367 | 1.34e-163 | 461 |
MS.gene036557.t1 | MTR_4g118400 | 68.421 | 342 | 60 | 6 | 1 | 342 | 1 | 294 | 1.78e-155 | 438 |
MS.gene036557.t1 | MTR_4g117720 | 61.782 | 348 | 107 | 6 | 1 | 342 | 44 | 371 | 1.90e-136 | 393 |
MS.gene036557.t1 | MTR_3g103020 | 52.895 | 380 | 121 | 6 | 1 | 342 | 13 | 372 | 5.62e-122 | 356 |
MS.gene036557.t1 | MTR_3g034180 | 51.928 | 389 | 120 | 9 | 1 | 342 | 115 | 483 | 1.88e-115 | 343 |
MS.gene036557.t1 | MTR_3g034130 | 50.394 | 381 | 123 | 8 | 1 | 334 | 1 | 362 | 2.21e-108 | 321 |
MS.gene036557.t1 | MTR_4g109280 | 51.989 | 377 | 120 | 11 | 1 | 341 | 1 | 352 | 1.28e-107 | 319 |
MS.gene036557.t1 | MTR_4g117850 | 50.392 | 383 | 117 | 10 | 4 | 341 | 19 | 373 | 1.05e-106 | 317 |
MS.gene036557.t1 | MTR_3g034160 | 51.157 | 389 | 123 | 10 | 1 | 342 | 1 | 369 | 3.39e-106 | 316 |
MS.gene036557.t1 | MTR_4g094365 | 48.158 | 380 | 137 | 10 | 1 | 342 | 1 | 358 | 1.45e-101 | 303 |
MS.gene036557.t1 | MTR_4g122850 | 49.185 | 368 | 122 | 12 | 19 | 342 | 12 | 358 | 2.95e-100 | 301 |
MS.gene036557.t1 | MTR_4g109270 | 49.479 | 384 | 126 | 10 | 1 | 342 | 1 | 358 | 7.23e-99 | 296 |
MS.gene036557.t1 | MTR_4g116330 | 45.932 | 381 | 143 | 10 | 2 | 342 | 17 | 374 | 2.93e-93 | 283 |
MS.gene036557.t1 | MTR_5g097210 | 47.656 | 384 | 131 | 11 | 2 | 343 | 3 | 358 | 3.42e-91 | 277 |
MS.gene036557.t1 | MTR_4g117770 | 47.105 | 380 | 144 | 9 | 1 | 342 | 1 | 361 | 4.53e-91 | 277 |
MS.gene036557.t1 | MTR_4g117810 | 47.105 | 380 | 144 | 9 | 1 | 342 | 1 | 361 | 4.53e-91 | 277 |
MS.gene036557.t1 | MTR_4g023080 | 46.579 | 380 | 131 | 12 | 1 | 341 | 1 | 347 | 6.07e-91 | 276 |
MS.gene036557.t1 | MTR_4g023090 | 44.501 | 391 | 145 | 9 | 2 | 342 | 10 | 378 | 8.65e-91 | 277 |
MS.gene036557.t1 | MTR_4g117780 | 45.789 | 380 | 149 | 10 | 1 | 342 | 1 | 361 | 2.93e-90 | 275 |
MS.gene036557.t1 | MTR_4g023130 | 48.851 | 348 | 129 | 10 | 1 | 341 | 1 | 306 | 4.86e-89 | 270 |
MS.gene036557.t1 | MTR_5g070080 | 45.663 | 392 | 146 | 10 | 2 | 342 | 4 | 379 | 6.12e-87 | 267 |
MS.gene036557.t1 | MTR_8g032390 | 49.008 | 353 | 149 | 13 | 3 | 342 | 35 | 369 | 8.30e-87 | 266 |
MS.gene036557.t1 | MTR_8g433040 | 46.825 | 378 | 131 | 10 | 3 | 342 | 13 | 358 | 3.45e-86 | 264 |
MS.gene036557.t1 | MTR_8g032380 | 46.825 | 378 | 131 | 10 | 3 | 342 | 13 | 358 | 3.45e-86 | 264 |
MS.gene036557.t1 | MTR_1g055135 | 44.920 | 374 | 158 | 11 | 4 | 342 | 9 | 369 | 1.53e-85 | 263 |
MS.gene036557.t1 | MTR_5g070130 | 43.669 | 387 | 153 | 9 | 1 | 342 | 4 | 370 | 3.96e-84 | 260 |
MS.gene036557.t1 | MTR_4g021785 | 43.700 | 373 | 140 | 8 | 7 | 341 | 8 | 348 | 8.81e-83 | 255 |
MS.gene036557.t1 | MTR_4g117870 | 48.718 | 312 | 104 | 7 | 32 | 342 | 5 | 261 | 2.78e-82 | 251 |
MS.gene036557.t1 | MTR_1g055195 | 49.667 | 300 | 112 | 9 | 51 | 342 | 204 | 472 | 6.81e-81 | 254 |
MS.gene036557.t1 | MTR_4g023070 | 42.377 | 387 | 144 | 11 | 8 | 341 | 3 | 363 | 4.79e-80 | 249 |
MS.gene036557.t1 | MTR_4g117750 | 45.503 | 378 | 140 | 9 | 7 | 343 | 2 | 354 | 1.09e-79 | 251 |
MS.gene036557.t1 | MTR_4g117750 | 57.364 | 129 | 52 | 2 | 216 | 342 | 350 | 477 | 4.76e-36 | 136 |
MS.gene036557.t1 | MTR_4g023120 | 42.010 | 388 | 144 | 12 | 8 | 341 | 3 | 363 | 2.34e-79 | 247 |
MS.gene036557.t1 | MTR_4g023190 | 46.354 | 384 | 133 | 15 | 1 | 342 | 1 | 353 | 1.57e-78 | 244 |
MS.gene036557.t1 | MTR_5g070088 | 42.377 | 387 | 159 | 9 | 7 | 342 | 6 | 379 | 3.09e-78 | 244 |
MS.gene036557.t1 | MTR_4g023380 | 41.353 | 399 | 139 | 8 | 2 | 342 | 10 | 371 | 7.18e-78 | 243 |
MS.gene036557.t1 | MTR_4g023150 | 45.312 | 384 | 138 | 14 | 1 | 342 | 1 | 354 | 1.15e-75 | 237 |
MS.gene036557.t1 | MTR_4g023200 | 47.452 | 314 | 130 | 13 | 34 | 342 | 71 | 354 | 5.05e-72 | 228 |
MS.gene036557.t1 | MTR_4g118370 | 50.195 | 257 | 88 | 7 | 93 | 343 | 33 | 255 | 6.14e-72 | 224 |
MS.gene036557.t1 | MTR_4g023440 | 40.483 | 373 | 124 | 8 | 6 | 342 | 16 | 326 | 1.22e-71 | 226 |
MS.gene036557.t1 | MTR_4g116320 | 57.848 | 223 | 73 | 7 | 128 | 342 | 43 | 252 | 3.48e-70 | 219 |
MS.gene036557.t1 | MTR_4g116330 | 40.420 | 381 | 125 | 10 | 2 | 342 | 17 | 335 | 6.00e-70 | 222 |
MS.gene036557.t1 | MTR_8g433030 | 44.729 | 351 | 134 | 14 | 3 | 342 | 35 | 336 | 2.85e-69 | 220 |
MS.gene036557.t1 | MTR_8g013010 | 45.423 | 284 | 99 | 4 | 1 | 249 | 47 | 309 | 4.36e-68 | 216 |
MS.gene036557.t1 | MTR_1g055165 | 39.837 | 369 | 130 | 12 | 4 | 342 | 6 | 312 | 2.37e-67 | 214 |
MS.gene036557.t1 | MTR_7g079370 | 43.963 | 323 | 147 | 10 | 34 | 342 | 48 | 350 | 2.20e-65 | 211 |
MS.gene036557.t1 | MTR_8g040935 | 55.450 | 211 | 78 | 5 | 139 | 342 | 1 | 202 | 5.77e-65 | 204 |
MS.gene036557.t1 | MTR_4g121580 | 39.481 | 385 | 140 | 13 | 1 | 338 | 1 | 339 | 2.47e-63 | 206 |
MS.gene036557.t1 | MTR_7g079400 | 41.346 | 312 | 150 | 9 | 41 | 342 | 43 | 331 | 1.46e-62 | 202 |
MS.gene036557.t1 | MTR_8g102520 | 38.983 | 354 | 166 | 13 | 1 | 342 | 1 | 316 | 4.09e-59 | 193 |
MS.gene036557.t1 | MTR_1g055250 | 47.012 | 251 | 108 | 10 | 99 | 341 | 27 | 260 | 4.20e-58 | 191 |
MS.gene036557.t1 | MTR_1g055175 | 54.271 | 199 | 73 | 7 | 151 | 342 | 8 | 195 | 1.56e-56 | 182 |
MS.gene036557.t1 | MTR_4g116340 | 47.391 | 230 | 89 | 4 | 1 | 206 | 26 | 247 | 7.70e-54 | 177 |
MS.gene036557.t1 | MTR_6g463430 | 47.964 | 221 | 85 | 7 | 126 | 342 | 2 | 196 | 8.24e-50 | 165 |
MS.gene036557.t1 | MTR_4g117530 | 40.891 | 247 | 98 | 4 | 98 | 342 | 47 | 247 | 1.70e-47 | 161 |
MS.gene036557.t1 | MTR_2g048580 | 35.659 | 387 | 153 | 16 | 1 | 342 | 1 | 336 | 2.37e-46 | 160 |
MS.gene036557.t1 | MTR_7g117720 | 47.236 | 199 | 79 | 5 | 1 | 180 | 1 | 192 | 4.97e-43 | 150 |
MS.gene036557.t1 | MTR_7g117720 | 54.455 | 101 | 41 | 3 | 248 | 343 | 172 | 272 | 2.20e-21 | 92.4 |
MS.gene036557.t1 | MTR_7g079420 | 38.710 | 279 | 114 | 11 | 78 | 342 | 903 | 1138 | 3.82e-42 | 157 |
MS.gene036557.t1 | MTR_4g118360 | 67.273 | 110 | 32 | 2 | 235 | 342 | 13 | 120 | 3.54e-41 | 140 |
MS.gene036557.t1 | MTR_4g117430 | 53.165 | 158 | 51 | 6 | 93 | 248 | 15 | 151 | 9.31e-41 | 140 |
MS.gene036557.t1 | MTR_4g114700 | 36.462 | 277 | 110 | 9 | 74 | 341 | 2 | 221 | 3.37e-39 | 139 |
MS.gene036557.t1 | MTR_8g098830 | 42.697 | 178 | 88 | 5 | 146 | 319 | 29 | 196 | 6.56e-34 | 125 |
MS.gene036557.t1 | MTR_4g122860 | 40.513 | 195 | 70 | 7 | 157 | 342 | 157 | 314 | 1.58e-31 | 121 |
MS.gene036557.t1 | MTR_5g023000 | 65.169 | 89 | 31 | 0 | 254 | 342 | 5 | 93 | 2.06e-31 | 114 |
MS.gene036557.t1 | MTR_7g079450 | 47.222 | 144 | 62 | 4 | 200 | 342 | 1 | 131 | 6.92e-29 | 108 |
MS.gene036557.t1 | MTR_6g034720 | 51.351 | 111 | 51 | 2 | 104 | 211 | 53 | 163 | 4.42e-24 | 98.6 |
MS.gene036557.t1 | MTR_0667s0010 | 27.011 | 348 | 209 | 11 | 8 | 316 | 6 | 347 | 4.95e-24 | 102 |
MS.gene036557.t1 | MTR_2g031720 | 27.536 | 345 | 213 | 11 | 8 | 320 | 6 | 345 | 1.58e-23 | 100 |
MS.gene036557.t1 | MTR_4g133170 | 28.086 | 324 | 187 | 14 | 8 | 299 | 4 | 313 | 4.92e-23 | 99.0 |
MS.gene036557.t1 | MTR_5g057790 | 31.962 | 316 | 156 | 14 | 8 | 287 | 46 | 338 | 1.01e-21 | 95.5 |
MS.gene036557.t1 | MTR_2g031640 | 26.393 | 341 | 216 | 12 | 8 | 319 | 6 | 340 | 2.54e-21 | 94.0 |
MS.gene036557.t1 | MTR_2g031680 | 26.471 | 340 | 214 | 11 | 8 | 319 | 6 | 337 | 2.61e-21 | 94.0 |
MS.gene036557.t1 | MTR_2g024110 | 26.814 | 317 | 188 | 12 | 8 | 291 | 4 | 309 | 3.58e-21 | 93.6 |
MS.gene036557.t1 | MTR_2g021150 | 26.842 | 380 | 210 | 16 | 6 | 340 | 12 | 368 | 4.10e-21 | 93.6 |
MS.gene036557.t1 | MTR_1g094210 | 26.271 | 354 | 195 | 11 | 2 | 317 | 51 | 376 | 8.49e-21 | 92.8 |
MS.gene036557.t1 | MTR_3g007360 | 28.926 | 363 | 192 | 17 | 11 | 336 | 55 | 388 | 9.52e-21 | 92.8 |
MS.gene036557.t1 | MTR_1g094210 | 26.124 | 356 | 197 | 11 | 2 | 319 | 51 | 378 | 1.51e-20 | 92.0 |
MS.gene036557.t1 | MTR_4g109290 | 42.857 | 140 | 59 | 5 | 6 | 137 | 7 | 133 | 3.74e-20 | 87.0 |
MS.gene036557.t1 | MTR_5g069120 | 42.754 | 138 | 60 | 5 | 32 | 160 | 50 | 177 | 7.33e-20 | 85.9 |
MS.gene036557.t1 | MTR_5g057710 | 30.794 | 315 | 159 | 15 | 8 | 286 | 46 | 337 | 7.18e-19 | 87.0 |
MS.gene036557.t1 | MTR_1g068835 | 27.160 | 324 | 192 | 13 | 8 | 299 | 4 | 315 | 9.90e-19 | 86.7 |
MS.gene036557.t1 | MTR_3g007330 | 27.707 | 314 | 155 | 13 | 6 | 278 | 46 | 328 | 1.06e-18 | 86.7 |
MS.gene036557.t1 | MTR_2g026010 | 29.392 | 296 | 158 | 13 | 60 | 329 | 72 | 342 | 1.15e-18 | 86.7 |
MS.gene036557.t1 | MTR_3g006670 | 27.619 | 315 | 152 | 13 | 6 | 273 | 47 | 332 | 2.71e-18 | 85.5 |
MS.gene036557.t1 | MTR_1g068875 | 25.153 | 326 | 195 | 11 | 8 | 299 | 4 | 314 | 4.31e-18 | 84.7 |
MS.gene036557.t1 | MTR_3g036430 | 28.214 | 280 | 161 | 9 | 6 | 273 | 18 | 269 | 5.87e-18 | 84.0 |
MS.gene036557.t1 | MTR_2g426020 | 23.229 | 353 | 215 | 10 | 8 | 316 | 6 | 346 | 5.96e-18 | 84.7 |
MS.gene036557.t1 | MTR_4g108820 | 29.032 | 279 | 169 | 9 | 5 | 280 | 39 | 291 | 1.21e-17 | 82.8 |
MS.gene036557.t1 | MTR_8g464770 | 25.773 | 388 | 223 | 13 | 3 | 342 | 7 | 377 | 1.45e-17 | 83.2 |
MS.gene036557.t1 | MTR_3g083010 | 25.815 | 399 | 223 | 15 | 8 | 342 | 6 | 395 | 2.36e-17 | 82.8 |
MS.gene036557.t1 | MTR_5g057690 | 28.846 | 312 | 161 | 15 | 8 | 287 | 46 | 328 | 2.45e-17 | 82.8 |
MS.gene036557.t1 | MTR_2g028130 | 25.588 | 340 | 194 | 12 | 8 | 296 | 5 | 336 | 2.45e-17 | 82.8 |
MS.gene036557.t1 | MTR_3g014540 | 30.945 | 307 | 151 | 14 | 6 | 273 | 27 | 311 | 2.63e-17 | 82.4 |
MS.gene036557.t1 | MTR_2g028160 | 25.707 | 389 | 213 | 16 | 8 | 333 | 5 | 380 | 3.89e-17 | 82.4 |
MS.gene036557.t1 | MTR_6g027910 | 28.238 | 386 | 198 | 19 | 11 | 340 | 12 | 374 | 9.99e-17 | 80.9 |
MS.gene036557.t1 | MTR_3g009300 | 29.310 | 290 | 163 | 13 | 11 | 286 | 37 | 298 | 1.58e-16 | 80.1 |
MS.gene036557.t1 | MTR_1g055200 | 44.554 | 101 | 43 | 3 | 76 | 168 | 4 | 99 | 2.20e-16 | 74.3 |
MS.gene036557.t1 | MTR_3g009310 | 29.582 | 311 | 158 | 13 | 6 | 278 | 40 | 327 | 2.38e-16 | 79.7 |
MS.gene036557.t1 | MTR_2g426070 | 26.301 | 365 | 204 | 12 | 9 | 320 | 7 | 359 | 2.80e-16 | 79.7 |
MS.gene036557.t1 | MTR_2g024100 | 27.757 | 263 | 165 | 10 | 62 | 303 | 80 | 338 | 3.26e-16 | 79.3 |
MS.gene036557.t1 | MTR_7g069550 | 26.185 | 401 | 215 | 15 | 2 | 337 | 7 | 391 | 3.82e-16 | 79.3 |
MS.gene036557.t1 | MTR_3g014570 | 28.354 | 328 | 158 | 15 | 6 | 286 | 27 | 324 | 3.92e-16 | 79.0 |
MS.gene036557.t1 | MTR_1g068860 | 25.890 | 309 | 173 | 11 | 8 | 278 | 4 | 294 | 4.86e-16 | 78.6 |
MS.gene036557.t1 | MTR_3g010920 | 25.132 | 378 | 202 | 11 | 6 | 340 | 42 | 381 | 4.96e-16 | 78.6 |
MS.gene036557.t1 | MTR_5g011200 | 27.303 | 304 | 168 | 13 | 8 | 275 | 17 | 303 | 7.12e-16 | 78.2 |
MS.gene036557.t1 | MTR_2g426090 | 25.915 | 355 | 197 | 14 | 11 | 317 | 9 | 345 | 7.36e-16 | 78.6 |
MS.gene036557.t1 | MTR_4g013180 | 26.579 | 380 | 197 | 17 | 7 | 321 | 10 | 372 | 7.40e-16 | 78.6 |
MS.gene036557.t1 | MTR_2g028140 | 25.460 | 326 | 170 | 13 | 8 | 273 | 5 | 317 | 1.22e-15 | 77.8 |
MS.gene036557.t1 | MTR_8g467140 | 26.198 | 313 | 180 | 14 | 7 | 288 | 31 | 323 | 1.27e-15 | 77.0 |
MS.gene036557.t1 | MTR_2g025960 | 29.134 | 254 | 135 | 13 | 79 | 303 | 6 | 243 | 2.15e-15 | 76.3 |
MS.gene036557.t1 | MTR_2g025420 | 25.737 | 373 | 213 | 15 | 8 | 320 | 6 | 374 | 2.75e-15 | 76.6 |
MS.gene036557.t1 | MTR_7g070440 | 28.615 | 325 | 163 | 16 | 7 | 282 | 6 | 310 | 3.12e-15 | 76.3 |
MS.gene036557.t1 | MTR_8g013005 | 62.264 | 53 | 20 | 0 | 290 | 342 | 1 | 53 | 7.27e-15 | 68.6 |
MS.gene036557.t1 | MTR_6g086825 | 24.566 | 403 | 215 | 15 | 7 | 338 | 69 | 453 | 8.46e-15 | 75.5 |
MS.gene036557.t1 | MTR_2g078900 | 27.010 | 311 | 152 | 14 | 6 | 273 | 31 | 309 | 1.19e-14 | 74.3 |
MS.gene036557.t1 | MTR_7g079640 | 27.297 | 370 | 195 | 15 | 2 | 321 | 7 | 352 | 1.41e-14 | 74.3 |
MS.gene036557.t1 | MTR_7g056820 | 25.613 | 367 | 204 | 16 | 6 | 319 | 5 | 355 | 2.47e-14 | 73.6 |
MS.gene036557.t1 | MTR_3g013740 | 27.928 | 333 | 159 | 17 | 8 | 285 | 44 | 350 | 2.63e-14 | 73.9 |
MS.gene036557.t1 | MTR_4g061340 | 26.646 | 319 | 172 | 13 | 6 | 284 | 24 | 320 | 2.70e-14 | 73.6 |
MS.gene036557.t1 | MTR_7g028660 | 26.316 | 323 | 174 | 11 | 5 | 278 | 8 | 315 | 2.83e-14 | 73.6 |
MS.gene036557.t1 | MTR_3g010590 | 27.213 | 305 | 150 | 14 | 6 | 273 | 37 | 306 | 2.86e-14 | 73.6 |
MS.gene036557.t1 | MTR_5g007610 | 28.000 | 325 | 172 | 16 | 6 | 287 | 39 | 344 | 3.37e-14 | 73.6 |
MS.gene036557.t1 | MTR_0054s0090 | 23.430 | 414 | 211 | 17 | 7 | 341 | 16 | 402 | 4.12e-14 | 73.2 |
MS.gene036557.t1 | MTR_3g013770 | 28.526 | 312 | 156 | 15 | 6 | 273 | 31 | 319 | 4.41e-14 | 73.2 |
MS.gene036557.t1 | MTR_2g031700 | 27.434 | 226 | 133 | 8 | 8 | 208 | 6 | 225 | 5.89e-14 | 71.6 |
MS.gene036557.t1 | MTR_3g010970 | 30.457 | 197 | 100 | 9 | 79 | 273 | 155 | 316 | 8.58e-14 | 72.0 |
MS.gene036557.t1 | MTR_0054s0100 | 23.373 | 415 | 214 | 16 | 3 | 338 | 12 | 401 | 1.40e-13 | 71.6 |
MS.gene036557.t1 | MTR_2g021050 | 24.432 | 352 | 193 | 14 | 8 | 315 | 5 | 327 | 1.48e-13 | 71.2 |
MS.gene036557.t1 | MTR_1g097490 | 25.543 | 368 | 213 | 14 | 8 | 340 | 49 | 390 | 1.67e-13 | 71.2 |
MS.gene036557.t1 | MTR_2g078870 | 28.962 | 183 | 99 | 6 | 94 | 273 | 78 | 232 | 1.84e-13 | 70.5 |
MS.gene036557.t1 | MTR_7g016930 | 25.962 | 312 | 186 | 10 | 2 | 279 | 10 | 310 | 2.39e-13 | 70.5 |
MS.gene036557.t1 | MTR_7g057270 | 26.480 | 321 | 179 | 16 | 8 | 278 | 26 | 339 | 4.77e-13 | 70.1 |
MS.gene036557.t1 | MTR_7g056760 | 23.192 | 401 | 227 | 14 | 5 | 340 | 20 | 404 | 5.18e-13 | 69.7 |
MS.gene036557.t1 | MTR_5g057020 | 27.742 | 310 | 162 | 14 | 8 | 287 | 46 | 323 | 5.46e-13 | 69.3 |
MS.gene036557.t1 | MTR_8g046310 | 24.274 | 379 | 220 | 12 | 11 | 343 | 19 | 376 | 5.60e-13 | 69.7 |
MS.gene036557.t1 | MTR_7g017130 | 26.829 | 328 | 161 | 13 | 8 | 273 | 18 | 328 | 6.45e-13 | 69.7 |
MS.gene036557.t1 | MTR_5g022850 | 25.439 | 342 | 196 | 12 | 7 | 318 | 15 | 327 | 7.63e-13 | 68.9 |
MS.gene036557.t1 | MTR_0044s0300 | 28.758 | 306 | 154 | 13 | 6 | 273 | 36 | 315 | 7.80e-13 | 69.3 |
MS.gene036557.t1 | MTR_7g017170 | 26.829 | 328 | 161 | 13 | 8 | 273 | 18 | 328 | 8.44e-13 | 69.3 |
MS.gene036557.t1 | MTR_7g060940 | 25.124 | 402 | 212 | 17 | 1 | 338 | 15 | 391 | 9.55e-13 | 68.9 |
MS.gene036557.t1 | MTR_3g010870 | 25.587 | 383 | 204 | 17 | 6 | 340 | 35 | 384 | 1.15e-12 | 68.6 |
MS.gene036557.t1 | MTR_4g122840 | 36.232 | 138 | 43 | 4 | 207 | 342 | 164 | 258 | 1.16e-12 | 67.8 |
MS.gene036557.t1 | MTR_4g037465 | 23.232 | 396 | 223 | 17 | 5 | 341 | 18 | 391 | 1.20e-12 | 68.6 |
MS.gene036557.t1 | MTR_4g023430 | 48.684 | 76 | 36 | 1 | 270 | 342 | 141 | 216 | 1.32e-12 | 66.6 |
MS.gene036557.t1 | MTR_4g070550 | 24.375 | 320 | 175 | 12 | 8 | 273 | 5 | 311 | 1.35e-12 | 68.6 |
MS.gene036557.t1 | MTR_6g053260 | 25.000 | 312 | 164 | 14 | 6 | 273 | 335 | 620 | 1.43e-12 | 68.9 |
MS.gene036557.t1 | MTR_3g007430 | 27.181 | 298 | 163 | 12 | 11 | 273 | 46 | 324 | 2.04e-12 | 68.2 |
MS.gene036557.t1 | MTR_0128s0020 | 24.250 | 400 | 208 | 18 | 8 | 338 | 18 | 391 | 2.30e-12 | 67.8 |
MS.gene036557.t1 | MTR_0760s0010 | 28.523 | 298 | 141 | 14 | 16 | 274 | 55 | 319 | 4.16e-12 | 67.0 |
MS.gene036557.t1 | MTR_2g046920 | 24.437 | 311 | 185 | 13 | 4 | 282 | 20 | 312 | 4.40e-12 | 67.0 |
MS.gene036557.t1 | MTR_1g097560 | 25.072 | 347 | 192 | 15 | 8 | 316 | 36 | 352 | 5.92e-12 | 66.6 |
MS.gene036557.t1 | MTR_5g057643 | 31.169 | 231 | 114 | 8 | 8 | 203 | 46 | 266 | 1.35e-11 | 64.7 |
MS.gene036557.t1 | MTR_7g017040 | 25.064 | 391 | 230 | 12 | 2 | 338 | 10 | 391 | 1.67e-11 | 65.1 |
MS.gene036557.t1 | MTR_3g030250 | 23.762 | 303 | 165 | 11 | 6 | 273 | 35 | 306 | 1.77e-11 | 65.1 |
MS.gene036557.t1 | MTR_6g021880 | 26.923 | 286 | 170 | 11 | 17 | 290 | 71 | 329 | 1.85e-11 | 65.1 |
MS.gene036557.t1 | MTR_3g011100 | 26.444 | 329 | 173 | 16 | 6 | 289 | 233 | 537 | 2.01e-11 | 65.5 |
MS.gene036557.t1 | MTR_3g010430 | 25.159 | 314 | 160 | 11 | 6 | 273 | 34 | 318 | 2.69e-11 | 64.7 |
MS.gene036557.t1 | MTR_2g104340 | 24.138 | 406 | 215 | 13 | 2 | 338 | 8 | 389 | 2.86e-11 | 64.7 |
MS.gene036557.t1 | MTR_3g030310 | 26.582 | 316 | 156 | 16 | 6 | 273 | 19 | 306 | 3.10e-11 | 64.3 |
MS.gene036557.t1 | MTR_5g046260 | 24.561 | 285 | 161 | 10 | 6 | 273 | 2 | 249 | 3.25e-11 | 63.5 |
MS.gene036557.t1 | MTR_5g037680 | 23.284 | 408 | 214 | 14 | 1 | 338 | 1 | 379 | 3.29e-11 | 64.7 |
MS.gene036557.t1 | MTR_5g056990 | 31.579 | 190 | 106 | 9 | 98 | 286 | 16 | 182 | 3.48e-11 | 62.8 |
MS.gene036557.t1 | MTR_2g046830 | 24.038 | 312 | 185 | 12 | 4 | 282 | 21 | 313 | 5.45e-11 | 63.5 |
MS.gene036557.t1 | MTR_1004s0010 | 30.392 | 204 | 111 | 10 | 74 | 274 | 114 | 289 | 5.92e-11 | 63.5 |
MS.gene036557.t1 | MTR_3g030240 | 24.611 | 386 | 194 | 19 | 6 | 340 | 38 | 377 | 9.72e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036557.t1 | AT4G12560 | 30.631 | 222 | 121 | 13 | 79 | 279 | 94 | 303 | 3.44e-12 | 67.4 |
MS.gene036557.t1 | AT4G12560 | 30.631 | 222 | 121 | 13 | 79 | 279 | 94 | 303 | 3.44e-12 | 67.4 |
MS.gene036557.t1 | AT4G12560 | 30.631 | 222 | 121 | 13 | 79 | 279 | 94 | 303 | 3.44e-12 | 67.4 |
MS.gene036557.t1 | AT3G06240 | 25.610 | 246 | 159 | 10 | 73 | 311 | 162 | 390 | 5.79e-12 | 66.6 |
Find 74 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTCATCTATATGGTTT+TGG | 0.189552 | 8.3:+8120468 | MS.gene036557:CDS |
CATCATTTCATTCATCTATA+TGG | 0.228144 | 8.3:+8120462 | MS.gene036557:CDS |
CAAATACCTTTGTCTCCTTA+TGG | 0.237521 | 8.3:+8120423 | MS.gene036557:CDS |
GATTGTGATTTGTGGGTATT+TGG | 0.250931 | 8.3:+8120822 | MS.gene036557:CDS |
TAATGTATTGAAAGAAATTA+AGG | 0.253260 | 8.3:+8120590 | MS.gene036557:CDS |
GAAATGATGGACACGTAAAT+TGG | 0.268029 | 8.3:-8120448 | None:intergenic |
CCCAATTCTGTTGAGGTTGC+CGG | 0.285442 | 8.3:+8120053 | MS.gene036557:CDS |
ATGGTAGGGTCACTCTTTAA+TGG | 0.291271 | 8.3:+8120651 | MS.gene036557:CDS |
AAGATGATGTAGTTGAAATA+TGG | 0.308827 | 8.3:+8120871 | MS.gene036557:CDS |
TAATCAGAGAAGTTCATATA+AGG | 0.310951 | 8.3:-8120624 | None:intergenic |
TGGTAGGGTCACTCTTTAAT+GGG | 0.318907 | 8.3:+8120652 | MS.gene036557:CDS |
ACCGGCAACCTCAACAGAAT+TGG | 0.325341 | 8.3:-8120054 | None:intergenic |
CCACGATGGGGATGCGGATC+AGG | 0.349700 | 8.3:-8120297 | None:intergenic |
TTGGTGAGTTTCTCAGTGTA+TGG | 0.351491 | 8.3:+8120841 | MS.gene036557:CDS |
TCTTTAATGGGGCTATTCAC+TGG | 0.387565 | 8.3:+8120664 | MS.gene036557:CDS |
TGTGCAATTCTCTTTATAGT+AGG | 0.427774 | 8.3:-8121075 | None:intergenic |
TAATGGGGCTATTCACTGGT+TGG | 0.454880 | 8.3:+8120668 | MS.gene036557:CDS |
ATTGGAACTGATGGTGAAGT+TGG | 0.456865 | 8.3:+8121008 | MS.gene036557:CDS |
CCCGTCAGCAGATGATTATA+TGG | 0.463314 | 8.3:+8120497 | MS.gene036557:CDS |
CCGGCAACCTCAACAGAATT+GGG | 0.464802 | 8.3:-8120053 | None:intergenic |
TGCTTATCCCAATTCTGTTG+AGG | 0.470237 | 8.3:+8120046 | MS.gene036557:CDS |
TTTCCTTTCAATTAAATCAA+AGG | 0.478785 | 8.3:-8120727 | None:intergenic |
AATGTATTGAAAGAAATTAA+GGG | 0.482095 | 8.3:+8120591 | MS.gene036557:CDS |
AATCAGAGAAGTTCATATAA+GGG | 0.489827 | 8.3:-8120623 | None:intergenic |
TGGGGATGCGGATCAGGAGG+TGG | 0.502365 | 8.3:-8120291 | None:intergenic |
CATATAGATGAATGAAATGA+TGG | 0.505088 | 8.3:-8120461 | None:intergenic |
TTCTCTGATTATTCCATGGT+AGG | 0.508178 | 8.3:+8120636 | MS.gene036557:CDS |
TTGCCTTTGATTTAATTGAA+AGG | 0.515684 | 8.3:+8120724 | MS.gene036557:CDS |
AAAATAATAAAATCCACGAT+GGG | 0.521874 | 8.3:-8120310 | None:intergenic |
AGCAAGTCATGAGGCAGATA+CGG | 0.522225 | 8.3:-8120027 | None:intergenic |
AACCTACAGATTGTGATTTG+TGG | 0.524422 | 8.3:+8120814 | MS.gene036557:CDS |
TCTCTGATTATTCCATGGTA+GGG | 0.524862 | 8.3:+8120637 | MS.gene036557:CDS |
TTGGTGAAGTACGATGAAAA+AGG | 0.527194 | 8.3:+8121032 | MS.gene036557:CDS |
GCAATTCTCTTTATAGTAGG+AGG | 0.528562 | 8.3:-8121072 | None:intergenic |
TAACCTTGTTCGCTATCACC+GGG | 0.528671 | 8.3:-8121138 | None:intergenic |
ACCTACAGATTGTGATTTGT+GGG | 0.529972 | 8.3:+8120815 | MS.gene036557:CDS |
GAACTTCTCTGATTATTCCA+TGG | 0.539752 | 8.3:+8120632 | MS.gene036557:CDS |
AGATGATGTAGTTGAAATAT+GGG | 0.540044 | 8.3:+8120872 | MS.gene036557:CDS |
CAAACTAAACGTTCATGTAG+AGG | 0.541245 | 8.3:+8120336 | MS.gene036557:CDS |
CCATATAATCATCTGCTGAC+GGG | 0.544544 | 8.3:-8120497 | None:intergenic |
CGATGGGGATGCGGATCAGG+AGG | 0.544858 | 8.3:-8120294 | None:intergenic |
AACTGATGGTGAAGTTGGAT+TGG | 0.547756 | 8.3:+8121013 | MS.gene036557:CDS |
ACACGTAAATTGGAACCATA+AGG | 0.548163 | 8.3:-8120438 | None:intergenic |
TAAAATCCACGATGGGGATG+CGG | 0.550644 | 8.3:-8120303 | None:intergenic |
TATTTGTTTGTGAACTCTAG+TGG | 0.552733 | 8.3:-8120406 | None:intergenic |
AAACTAAACGTTCATGTAGA+GGG | 0.556540 | 8.3:+8120337 | MS.gene036557:CDS |
TAAAATAATAAAATCCACGA+TGG | 0.565805 | 8.3:-8120311 | None:intergenic |
GAGGTGGACGCACAAAACTA+AGG | 0.567113 | 8.3:-8120275 | None:intergenic |
AACCTTGTTCGCTATCACCG+GGG | 0.569785 | 8.3:-8121137 | None:intergenic |
GGTGATATTATTGGAACTGA+TGG | 0.578976 | 8.3:+8120999 | MS.gene036557:CDS |
ACCATATAATCATCTGCTGA+CGG | 0.579008 | 8.3:-8120498 | None:intergenic |
AGTCTTTGCATTCACTCCCC+CGG | 0.586455 | 8.3:+8121120 | MS.gene036557:CDS |
CTCTGTATACATAGCCACTC+GGG | 0.594887 | 8.3:-8121099 | None:intergenic |
GGTTCATGTTCAAGATCACC+TGG | 0.603390 | 8.3:-8120795 | None:intergenic |
TTGGAACCATAAGGAGACAA+AGG | 0.610034 | 8.3:-8120429 | None:intergenic |
TGTTTGTGAACTCTAGTGGA+TGG | 0.611408 | 8.3:-8120402 | None:intergenic |
ATTGGAGAGAAGTAATGAGT+GGG | 0.619618 | 8.3:-8120960 | None:intergenic |
ACCTTGTTCGCTATCACCGG+GGG | 0.621298 | 8.3:-8121136 | None:intergenic |
ATTAAAGAGTGACCCTACCA+TGG | 0.627645 | 8.3:-8120649 | None:intergenic |
TATTGGAGAGAAGTAATGAG+TGG | 0.628700 | 8.3:-8120961 | None:intergenic |
CTCTAGTGGATGGATTCCAT+AGG | 0.636511 | 8.3:-8120392 | None:intergenic |
ATAGGTAAAATTGTGTGCCA+CGG | 0.641710 | 8.3:-8120374 | None:intergenic |
ACTCTGTATACATAGCCACT+CGG | 0.643817 | 8.3:-8121100 | None:intergenic |
CCTGATCCGCATCCCCATCG+TGG | 0.645265 | 8.3:+8120297 | MS.gene036557:CDS |
AAACGTAAAAGAGACATCAC+CGG | 0.646155 | 8.3:-8120072 | None:intergenic |
AAATAATAAAATCCACGATG+GGG | 0.657033 | 8.3:-8120309 | None:intergenic |
AGTACAAAGTGCATTCGTCG+TGG | 0.657926 | 8.3:+8120904 | MS.gene036557:CDS |
ACCCACAAATCACAATCTGT+AGG | 0.659019 | 8.3:-8120816 | None:intergenic |
CAGAGAAGTTCATATAAGGG+AGG | 0.664094 | 8.3:-8120620 | None:intergenic |
GGTAGGGTCACTCTTTAATG+GGG | 0.671605 | 8.3:+8120653 | MS.gene036557:CDS |
GTCAGCAGATGATTATATGG+TGG | 0.681277 | 8.3:+8120500 | MS.gene036557:CDS |
AAGTCATGAGGCAGATACGG+TGG | 0.683856 | 8.3:-8120024 | None:intergenic |
AGAGAATTGCACATCCCGAG+TGG | 0.707706 | 8.3:+8121085 | MS.gene036557:CDS |
ATTGGGATAAGCAAGTCATG+AGG | 0.714760 | 8.3:-8120036 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTATTGAAAGAAATTAA+GGG | + | chr8.3:8120591-8120610 | MS.gene036557:CDS | 15.0% |
!! | TAATGTATTGAAAGAAATTA+AGG | + | chr8.3:8120590-8120609 | MS.gene036557:CDS | 15.0% |
!! | AAAATAATAAAATCCACGAT+GGG | - | chr8.3:8120313-8120332 | None:intergenic | 20.0% |
!! | AAAATGTGAATTTGCAAAAT+GGG | - | chr8.3:8120139-8120158 | None:intergenic | 20.0% |
!! | TAAAATAATAAAATCCACGA+TGG | - | chr8.3:8120314-8120333 | None:intergenic | 20.0% |
!! | TTTCCTTTCAATTAAATCAA+AGG | - | chr8.3:8120730-8120749 | None:intergenic | 20.0% |
!! | TTTGATATGAACAAAATTCT+AGG | - | chr8.3:8120183-8120202 | None:intergenic | 20.0% |
!!! | TCATAATTTTTCATCACATT+TGG | + | chr8.3:8120548-8120567 | MS.gene036557:CDS | 20.0% |
! | AAATAATAAAATCCACGATG+GGG | - | chr8.3:8120312-8120331 | None:intergenic | 25.0% |
! | AAGATGATGTAGTTGAAATA+TGG | + | chr8.3:8120871-8120890 | MS.gene036557:CDS | 25.0% |
! | AATCAGAGAAGTTCATATAA+GGG | - | chr8.3:8120626-8120645 | None:intergenic | 25.0% |
! | ACAAAAAGTGGTGATATTAT+TGG | + | chr8.3:8120990-8121009 | MS.gene036557:CDS | 25.0% |
! | AGATGATGTAGTTGAAATAT+GGG | + | chr8.3:8120872-8120891 | MS.gene036557:CDS | 25.0% |
! | CAAAATGTGAATTTGCAAAA+TGG | - | chr8.3:8120140-8120159 | None:intergenic | 25.0% |
! | CATATAGATGAATGAAATGA+TGG | - | chr8.3:8120464-8120483 | None:intergenic | 25.0% |
! | CATCATTTCATTCATCTATA+TGG | + | chr8.3:8120462-8120481 | MS.gene036557:CDS | 25.0% |
! | TAATCAGAGAAGTTCATATA+AGG | - | chr8.3:8120627-8120646 | None:intergenic | 25.0% |
!! | TCATTCATCTATATGGTTTT+GGG | + | chr8.3:8120469-8120488 | MS.gene036557:CDS | 25.0% |
!! | TTCATTCATCTATATGGTTT+TGG | + | chr8.3:8120468-8120487 | MS.gene036557:CDS | 25.0% |
!! | TTGCCTTTGATTTAATTGAA+AGG | + | chr8.3:8120724-8120743 | MS.gene036557:CDS | 25.0% |
AAACTAAACGTTCATGTAGA+GGG | + | chr8.3:8120337-8120356 | MS.gene036557:CDS | 30.0% | |
CCAATATGTTGTACAAAAAG+TGG | + | chr8.3:8120978-8120997 | MS.gene036557:CDS | 30.0% | |
TATTTGTTTGTGAACTCTAG+TGG | - | chr8.3:8120409-8120428 | None:intergenic | 30.0% | |
TCAAGTGTGTTTGTAAGTTA+TGG | + | chr8.3:8120094-8120113 | MS.gene036557:intron | 30.0% | |
TGTGCAATTCTCTTTATAGT+AGG | - | chr8.3:8121078-8121097 | None:intergenic | 30.0% | |
!!! | CCACTTTTTGTACAACATAT+TGG | - | chr8.3:8120981-8121000 | None:intergenic | 30.0% |
AAACGTAAAAGAGACATCAC+CGG | - | chr8.3:8120075-8120094 | None:intergenic | 35.0% | |
AACCTACAGATTGTGATTTG+TGG | + | chr8.3:8120814-8120833 | MS.gene036557:CDS | 35.0% | |
ACACGTAAATTGGAACCATA+AGG | - | chr8.3:8120441-8120460 | None:intergenic | 35.0% | |
ACCATATAATCATCTGCTGA+CGG | - | chr8.3:8120501-8120520 | None:intergenic | 35.0% | |
ATAGGTAAAATTGTGTGCCA+CGG | - | chr8.3:8120377-8120396 | None:intergenic | 35.0% | |
ATCAATCGAGTTTCAAGATC+TGG | - | chr8.3:8120207-8120226 | None:intergenic | 35.0% | |
ATTGGAGAGAAGTAATGAGT+GGG | - | chr8.3:8120963-8120982 | None:intergenic | 35.0% | |
CAAACTAAACGTTCATGTAG+AGG | + | chr8.3:8120336-8120355 | MS.gene036557:CDS | 35.0% | |
CAAATACCTTTGTCTCCTTA+TGG | + | chr8.3:8120423-8120442 | MS.gene036557:CDS | 35.0% | |
GAACTTCTCTGATTATTCCA+TGG | + | chr8.3:8120632-8120651 | MS.gene036557:CDS | 35.0% | |
GCAATTCTCTTTATAGTAGG+AGG | - | chr8.3:8121075-8121094 | None:intergenic | 35.0% | |
GGTGATATTATTGGAACTGA+TGG | + | chr8.3:8120999-8121018 | MS.gene036557:CDS | 35.0% | |
TATTGGAGAGAAGTAATGAG+TGG | - | chr8.3:8120964-8120983 | None:intergenic | 35.0% | |
TCTCTGATTATTCCATGGTA+GGG | + | chr8.3:8120637-8120656 | MS.gene036557:CDS | 35.0% | |
TTCTCTGATTATTCCATGGT+AGG | + | chr8.3:8120636-8120655 | MS.gene036557:CDS | 35.0% | |
TTGGTGAAGTACGATGAAAA+AGG | + | chr8.3:8121032-8121051 | MS.gene036557:CDS | 35.0% | |
! | ACCTACAGATTGTGATTTGT+GGG | + | chr8.3:8120815-8120834 | MS.gene036557:CDS | 35.0% |
! | GATTGTGATTTGTGGGTATT+TGG | + | chr8.3:8120822-8120841 | MS.gene036557:CDS | 35.0% |
!! | GAAATGATGGACACGTAAAT+TGG | - | chr8.3:8120451-8120470 | None:intergenic | 35.0% |
!!! | CTTTGCCAGATGATCTTTTT+TGG | + | chr8.3:8120763-8120782 | MS.gene036557:CDS | 35.0% |
ACCCACAAATCACAATCTGT+AGG | - | chr8.3:8120819-8120838 | None:intergenic | 40.0% | |
ACTCTGTATACATAGCCACT+CGG | - | chr8.3:8121103-8121122 | None:intergenic | 40.0% | |
ATGGTAGGGTCACTCTTTAA+TGG | + | chr8.3:8120651-8120670 | MS.gene036557:CDS | 40.0% | |
ATTAAAGAGTGACCCTACCA+TGG | - | chr8.3:8120652-8120671 | None:intergenic | 40.0% | |
ATTGGGATAAGCAAGTCATG+AGG | - | chr8.3:8120039-8120058 | None:intergenic | 40.0% | |
CAGAGAAGTTCATATAAGGG+AGG | - | chr8.3:8120623-8120642 | None:intergenic | 40.0% | |
CCATATAATCATCTGCTGAC+GGG | - | chr8.3:8120500-8120519 | None:intergenic | 40.0% | |
CCTCTCCAAAAAAGATCATC+TGG | - | chr8.3:8120771-8120790 | None:intergenic | 40.0% | |
GTCAGCAGATGATTATATGG+TGG | + | chr8.3:8120500-8120519 | MS.gene036557:CDS | 40.0% | |
TCTTTAATGGGGCTATTCAC+TGG | + | chr8.3:8120664-8120683 | MS.gene036557:CDS | 40.0% | |
TGCTTATCCCAATTCTGTTG+AGG | + | chr8.3:8120046-8120065 | MS.gene036557:CDS | 40.0% | |
TGGTAGGGTCACTCTTTAAT+GGG | + | chr8.3:8120652-8120671 | MS.gene036557:CDS | 40.0% | |
TGTTTGTGAACTCTAGTGGA+TGG | - | chr8.3:8120405-8120424 | None:intergenic | 40.0% | |
TTGGAACCATAAGGAGACAA+AGG | - | chr8.3:8120432-8120451 | None:intergenic | 40.0% | |
TTGGTGAGTTTCTCAGTGTA+TGG | + | chr8.3:8120841-8120860 | MS.gene036557:CDS | 40.0% | |
! | AACTGATGGTGAAGTTGGAT+TGG | + | chr8.3:8121013-8121032 | MS.gene036557:CDS | 40.0% |
! | ATTGGAACTGATGGTGAAGT+TGG | + | chr8.3:8121008-8121027 | MS.gene036557:CDS | 40.0% |
! | GTGGCACACAATTTTACCTA+TGG | + | chr8.3:8120376-8120395 | MS.gene036557:CDS | 40.0% |
!!! | CCAGATGATCTTTTTTGGAG+AGG | + | chr8.3:8120768-8120787 | MS.gene036557:CDS | 40.0% |
AGCAAGTCATGAGGCAGATA+CGG | - | chr8.3:8120030-8120049 | None:intergenic | 45.0% | |
AGTACAAAGTGCATTCGTCG+TGG | + | chr8.3:8120904-8120923 | MS.gene036557:CDS | 45.0% | |
CCCGTCAGCAGATGATTATA+TGG | + | chr8.3:8120497-8120516 | MS.gene036557:CDS | 45.0% | |
CTCTGTATACATAGCCACTC+GGG | - | chr8.3:8121102-8121121 | None:intergenic | 45.0% | |
GGTAGGGTCACTCTTTAATG+GGG | + | chr8.3:8120653-8120672 | MS.gene036557:CDS | 45.0% | |
GGTTCATGTTCAAGATCACC+TGG | - | chr8.3:8120798-8120817 | None:intergenic | 45.0% | |
TAAAATCCACGATGGGGATG+CGG | - | chr8.3:8120306-8120325 | None:intergenic | 45.0% | |
TAATGGGGCTATTCACTGGT+TGG | + | chr8.3:8120668-8120687 | MS.gene036557:CDS | 45.0% | |
! | CTCTAGTGGATGGATTCCAT+AGG | - | chr8.3:8120395-8120414 | None:intergenic | 45.0% |
! | GGGTTTATACTTTTGCACCG+TGG | + | chr8.3:8120357-8120376 | MS.gene036557:CDS | 45.0% |
!! | AATTCTAGGACTGTGTGCAG+TGG | - | chr8.3:8120169-8120188 | None:intergenic | 45.0% |
!!! | CTTTTTTGGAGAGGTTTGCC+AGG | + | chr8.3:8120777-8120796 | MS.gene036557:CDS | 45.0% |
AAGTCATGAGGCAGATACGG+TGG | - | chr8.3:8120027-8120046 | None:intergenic | 50.0% | |
ACCGGCAACCTCAACAGAAT+TGG | - | chr8.3:8120057-8120076 | None:intergenic | 50.0% | |
AGAGAATTGCACATCCCGAG+TGG | + | chr8.3:8121085-8121104 | MS.gene036557:CDS | 50.0% | |
AGTCTTTGCATTCACTCCCC+CGG | + | chr8.3:8121120-8121139 | MS.gene036557:CDS | 50.0% | |
CCCAATTCTGTTGAGGTTGC+CGG | + | chr8.3:8120053-8120072 | MS.gene036557:CDS | 50.0% | |
CCGGCAACCTCAACAGAATT+GGG | - | chr8.3:8120056-8120075 | None:intergenic | 50.0% | |
GAGGTGGACGCACAAAACTA+AGG | - | chr8.3:8120278-8120297 | None:intergenic | 50.0% | |
CCACGATGGGGATGCGGATC+AGG | - | chr8.3:8120300-8120319 | None:intergenic | 65.0% | |
CCTGATCCGCATCCCCATCG+TGG | + | chr8.3:8120297-8120316 | MS.gene036557:CDS | 65.0% | |
CGATGGGGATGCGGATCAGG+AGG | - | chr8.3:8120297-8120316 | None:intergenic | 65.0% | |
TGGGGATGCGGATCAGGAGG+TGG | - | chr8.3:8120294-8120313 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 8120012 | 8121145 | 8120012 | ID=MS.gene036557 |
chr8.3 | mRNA | 8120012 | 8121145 | 8120012 | ID=MS.gene036557.t1;Parent=MS.gene036557 |
chr8.3 | exon | 8120012 | 8120105 | 8120012 | ID=MS.gene036557.t1.exon1;Parent=MS.gene036557.t1 |
chr8.3 | CDS | 8120012 | 8120105 | 8120012 | ID=cds.MS.gene036557.t1;Parent=MS.gene036557.t1 |
chr8.3 | exon | 8120208 | 8121145 | 8120208 | ID=MS.gene036557.t1.exon2;Parent=MS.gene036557.t1 |
chr8.3 | CDS | 8120208 | 8121145 | 8120208 | ID=cds.MS.gene036557.t1;Parent=MS.gene036557.t1 |
Gene Sequence |
Protein sequence |