AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24286

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24286.t1 MTR_1g022200 77.259 321 32 3 88 367 50 370 3.20e-176 495
MS.gene24286.t1 MTR_1g023400 54.908 326 89 9 88 366 38 352 1.02e-98 297
MS.gene24286.t1 MTR_4g080200 50.000 226 97 9 146 366 135 349 7.15e-57 189
MS.gene24286.t1 MTR_1g023430 64.430 149 46 3 222 367 29 173 4.02e-54 176
MS.gene24286.t1 MTR_1g009110 48.458 227 102 8 146 367 163 379 8.68e-51 174
MS.gene24286.t1 MTR_1g037540 46.414 237 105 8 145 366 171 400 7.62e-50 172
MS.gene24286.t1 MTR_1g024125 67.521 117 33 3 238 350 38 153 1.06e-47 159
MS.gene24286.t1 MTR_1g022105 35.154 293 142 13 83 347 50 322 2.44e-35 132
MS.gene24286.t1 MTR_1g008000 31.967 244 107 10 134 367 75 269 2.80e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 79 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATAGCAACTTGAAAATT+TGG 0.088974 1.1:-2100087 MS.gene24286:CDS
TTAATTATACTATGAATTTC+TGG 0.160554 1.1:-2099889 MS.gene24286:CDS
AATTAACATCAATTTGAAAT+TGG 0.242224 1.1:+2099906 None:intergenic
ACAACTACCTTCAATTGTTA+TGG 0.255683 1.1:+2100613 None:intergenic
CATTGGATTACAAACAATTC+AGG 0.290334 1.1:-2100271 MS.gene24286:CDS
ATCGTATACTTGTATGGTTT+TGG 0.298483 1.1:-2100502 MS.gene24286:CDS
CAACTACCTTCAATTGTTAT+GGG 0.311257 1.1:+2100614 None:intergenic
CGACGTGTGATGATAGTAAA+AGG 0.340023 1.1:+2100334 None:intergenic
CGATCTTTAGCTGATAAGTT+TGG 0.349644 1.1:+2100172 None:intergenic
AACAAGAGTGTTATATTTGA+TGG 0.351323 1.1:+2100306 None:intergenic
CTATAGCAACTTGAAAATTT+GGG 0.354263 1.1:-2100086 MS.gene24286:CDS
TCAGATGTGTTCAACGATCT+TGG 0.357431 1.1:-2100797 MS.gene24286:intron
AGCAGGCTTAGGCGTTGATT+TGG 0.377488 1.1:+2101141 None:intergenic
CAACTTGAAAATTTGGGTAA+TGG 0.386894 1.1:-2100080 MS.gene24286:CDS
TTGTTAACGGCGTTTATCAT+TGG 0.397348 1.1:-2100288 MS.gene24286:CDS
TATGGGATAACGAAAATTGT+TGG 0.399718 1.1:+2100631 None:intergenic
TAACGAAAATTGTTGGAAAA+GGG 0.404601 1.1:+2100638 None:intergenic
GGAGGAGGAGGATGTCGAGT+AGG 0.405345 1.1:+2100355 None:intergenic
CGCGAGGCATGGCGGAGAAA+CGG 0.407564 1.1:+2101171 None:intergenic
AAATATAACACTCTTGTTAA+CGG 0.409193 1.1:-2100301 MS.gene24286:CDS
GGCAAAGTGAGTTGCCTTGA+TGG 0.414472 1.1:+2099927 None:intergenic
CGTTATCCCATAACAATTGA+AGG 0.426892 1.1:-2100620 MS.gene24286:intron
GCGAGGCATGGCGGAGAAAC+GGG 0.434038 1.1:+2101172 None:intergenic
ATTGAGAATAGAAGACATAT+CGG 0.437808 1.1:-2100892 MS.gene24286:CDS
AGGTCCATCGTATACTTGTA+TGG 0.461613 1.1:-2100508 MS.gene24286:CDS
TGGGTAATGGATCATCAAAA+TGG 0.462504 1.1:-2100067 MS.gene24286:CDS
GAGGAGGAGGATGTCGAGTA+GGG 0.464665 1.1:+2100356 None:intergenic
TGTGCAGAAGCAGGTTTAGC+AGG 0.467740 1.1:+2101124 None:intergenic
TCAGAGCCGCCTTTCTGAAA+CGG 0.475497 1.1:-2100763 MS.gene24286:CDS
ATAACGAAAATTGTTGGAAA+AGG 0.479344 1.1:+2100637 None:intergenic
ATGATAGTAAAAGGAGGAGG+AGG 0.485797 1.1:+2100343 None:intergenic
GAAGCAGGTTTAGCAGGCTT+AGG 0.488546 1.1:+2101130 None:intergenic
ACAAGAGTGTTATATTTGAT+GGG 0.491851 1.1:+2100307 None:intergenic
AACTTTGAAATCGATGATGT+TGG 0.496264 1.1:+2100468 None:intergenic
TCAGGCTACTATCGCTATGA+TGG 0.498019 1.1:-2100253 MS.gene24286:CDS
ATAGTCTAATCACTAAATCA+TGG 0.501050 1.1:-2100381 MS.gene24286:CDS
ACGAAAATTGTTGGAAAAGG+GGG 0.502464 1.1:+2100640 None:intergenic
ATAAGTTTGGCCCTCTGAGT+TGG 0.507074 1.1:+2100185 None:intergenic
CAACTCCTTGGAGGAAAGGA+TGG 0.511243 1.1:-2099971 MS.gene24286:CDS
TAATGGATCATCAAAATGGA+TGG 0.514911 1.1:-2100063 MS.gene24286:CDS
ACTTTCCATCCTTTCCTCCA+AGG 0.517316 1.1:+2099966 None:intergenic
AAGAATGGTGATCAACTCCT+TGG 0.519337 1.1:-2099983 MS.gene24286:CDS
ATGTGCGGTCTTTGGAAGAA+TGG 0.527423 1.1:-2099998 MS.gene24286:CDS
TTGGCAACCACCGCGAGGCA+TGG 0.538834 1.1:+2101160 None:intergenic
GCTGACAAAGGAGCAATGCT+TGG 0.545337 1.1:+2099851 None:intergenic
CATGTGCCGCCGTTTCAGAA+AGG 0.545728 1.1:+2100754 None:intergenic
TGATGATGTTGCTGAAATCA+AGG 0.546082 1.1:-2100137 MS.gene24286:CDS
TATGAACTATGTGCAGAAGC+AGG 0.546530 1.1:+2101115 None:intergenic
CATGGCGGAGAAACGGGTTG+CGG 0.548395 1.1:+2101178 None:intergenic
AACGAAAATTGTTGGAAAAG+GGG 0.551050 1.1:+2100639 None:intergenic
TGATCAACTCCTTGGAGGAA+AGG 0.554949 1.1:-2099975 MS.gene24286:CDS
AATGGTGATCAACTCCTTGG+AGG 0.555859 1.1:-2099980 MS.gene24286:CDS
ATCAATTTCACCAACTCAGA+GGG 0.558963 1.1:-2100195 MS.gene24286:CDS
TACGAAAATTGAACAAAGGT+GGG 0.569525 1.1:+2100020 None:intergenic
AATAGAAGACATATCGGAGA+TGG 0.576865 1.1:-2100886 MS.gene24286:intron
GTGATGATAGTAAAAGGAGG+AGG 0.579129 1.1:+2100340 None:intergenic
CGTTGCGAAAGTTAAAGCAT+AGG 0.589589 1.1:+2100218 None:intergenic
CTTGCATCATATGACCATCA+AGG 0.591771 1.1:-2099941 MS.gene24286:CDS
AATGGATCATCAAAATGGAT+GGG 0.593891 1.1:-2100062 MS.gene24286:CDS
TCATTAACTATCATGAGACT+AGG 0.598233 1.1:+2100716 None:intergenic
GAGCCGCCTTTCTGAAACGG+CGG 0.600948 1.1:-2100760 MS.gene24286:CDS
ATACGAAAATTGAACAAAGG+TGG 0.601250 1.1:+2100019 None:intergenic
AGGAGGAGGATGTCGAGTAG+GGG 0.617489 1.1:+2100357 None:intergenic
CTTGATGGTCATATGATGCA+AGG 0.628700 1.1:+2099942 None:intergenic
TTCTCCGCCATGCCTCGCGG+TGG 0.631008 1.1:-2101167 MS.gene24286:CDS
CAGCGTGAGAGAAGAACGAA+GGG 0.640156 1.1:+2101203 None:intergenic
CAAACTTTATGTTTCATCAG+CGG 0.640194 1.1:-2100410 MS.gene24286:CDS
GTGCCGCCGTTTCAGAAAGG+CGG 0.643474 1.1:+2100757 None:intergenic
TTAGCTAACTATGCTGACAA+AGG 0.648199 1.1:+2099839 None:intergenic
CGTTTCTCCGCCATGCCTCG+CGG 0.651740 1.1:-2101170 MS.gene24286:CDS
GATGATGTTGCTGAAATCAA+GGG 0.651975 1.1:-2100136 MS.gene24286:CDS
ACAGCGTGAGAGAAGAACGA+AGG 0.656279 1.1:+2101202 None:intergenic
TTGATGGTCATATGATGCAA+GGG 0.658471 1.1:+2099943 None:intergenic
CACATACGAAAATTGAACAA+AGG 0.671737 1.1:+2100016 None:intergenic
AAAACCATACAAGTATACGA+TGG 0.672123 1.1:+2100504 None:intergenic
GCAACCACCGCGAGGCATGG+CGG 0.682122 1.1:+2101163 None:intergenic
GATCAATTTCACCAACTCAG+AGG 0.690768 1.1:-2100196 MS.gene24286:CDS
CGTGTGATGATAGTAAAAGG+AGG 0.698571 1.1:+2100337 None:intergenic
TTGATTTGGCAACCACCGCG+AGG 0.706347 1.1:+2101155 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTATACTATGAATTTC+TGG - chr1.1:2101486-2101505 MS.gene24286:intron 15.0%
!!! AATTAACATCAATTTGAAAT+TGG + chr1.1:2101472-2101491 None:intergenic 15.0%
!!! TGTATTTCTTTTAATTTTAG+CGG - chr1.1:2099857-2099876 MS.gene24286:CDS 15.0%
!!! TTTTTTTTTTTTGTGCTTAT+AGG - chr1.1:2100414-2100433 MS.gene24286:CDS 15.0%
!! AAATATAACACTCTTGTTAA+CGG - chr1.1:2101074-2101093 MS.gene24286:intron 20.0%
!! TATTATTTCATGGATTTATG+AGG + chr1.1:2100071-2100090 None:intergenic 20.0%
!! TGGTAATTTCTATTATTTCA+TGG + chr1.1:2100081-2100100 None:intergenic 20.0%
!!! TCTCAATTTTTTCATTGTTA+TGG + chr1.1:2100470-2100489 None:intergenic 20.0%
!!! TTGATATTTACGATACTTTT+TGG + chr1.1:2100101-2100120 None:intergenic 20.0%
!!! TTTGAACTATCGATATTTTT+AGG + chr1.1:2099948-2099967 None:intergenic 20.0%
! ACTATAGCAACTTGAAAATT+TGG - chr1.1:2101288-2101307 MS.gene24286:intron 25.0%
! ATAACGAAAATTGTTGGAAA+AGG + chr1.1:2100741-2100760 None:intergenic 25.0%
! ATAGTCTAATCACTAAATCA+TGG - chr1.1:2100994-2101013 MS.gene24286:intron 25.0%
! ATTGAGAATAGAAGACATAT+CGG - chr1.1:2100483-2100502 MS.gene24286:CDS 25.0%
! CTATAGCAACTTGAAAATTT+GGG - chr1.1:2101289-2101308 MS.gene24286:intron 25.0%
! TAACGAAAATTGTTGGAAAA+GGG + chr1.1:2100740-2100759 None:intergenic 25.0%
!! GGAATTGCTAAATTATTTTC+AGG + chr1.1:2099927-2099946 None:intergenic 25.0%
!!! AACAAGAGTGTTATATTTGA+TGG + chr1.1:2101072-2101091 None:intergenic 25.0%
!!! ACAAGAGTGTTATATTTGAT+GGG + chr1.1:2101071-2101090 None:intergenic 25.0%
AAAACCATACAAGTATACGA+TGG + chr1.1:2100874-2100893 None:intergenic 30.0%
AACGAAAATTGTTGGAAAAG+GGG + chr1.1:2100739-2100758 None:intergenic 30.0%
AATGGATCATCAAAATGGAT+GGG - chr1.1:2101313-2101332 MS.gene24286:intron 30.0%
ACAACTACCTTCAATTGTTA+TGG + chr1.1:2100765-2100784 None:intergenic 30.0%
ACAATTGAAGGTAGTTGTAA+CGG - chr1.1:2100767-2100786 MS.gene24286:CDS 30.0%
ATACGAAAATTGAACAAAGG+TGG + chr1.1:2101359-2101378 None:intergenic 30.0%
CAAACTTTATGTTTCATCAG+CGG - chr1.1:2100965-2100984 MS.gene24286:intron 30.0%
CAACTACCTTCAATTGTTAT+GGG + chr1.1:2100764-2100783 None:intergenic 30.0%
CAACTTGAAAATTTGGGTAA+TGG - chr1.1:2101295-2101314 MS.gene24286:intron 30.0%
CACATACGAAAATTGAACAA+AGG + chr1.1:2101362-2101381 None:intergenic 30.0%
CATTGGATTACAAACAATTC+AGG - chr1.1:2101104-2101123 MS.gene24286:CDS 30.0%
TACGAAAATTGAACAAAGGT+GGG + chr1.1:2101358-2101377 None:intergenic 30.0%
TATGGGATAACGAAAATTGT+TGG + chr1.1:2100747-2100766 None:intergenic 30.0%
TCATTAACTATCATGAGACT+AGG + chr1.1:2100662-2100681 None:intergenic 30.0%
! ATCGTATACTTGTATGGTTT+TGG - chr1.1:2100873-2100892 MS.gene24286:intron 30.0%
! TAATGGATCATCAAAATGGA+TGG - chr1.1:2101312-2101331 MS.gene24286:intron 30.0%
! TTGTTCAATTTTCGTATGTG+CGG - chr1.1:2101362-2101381 MS.gene24286:intron 30.0%
!! AACTTTGAAATCGATGATGT+TGG + chr1.1:2100910-2100929 None:intergenic 30.0%
!!! CTTCAAAGGTTTTAATTAGC+GGG + chr1.1:2100152-2100171 None:intergenic 30.0%
!!! GCTTCAAAGGTTTTAATTAG+CGG + chr1.1:2100153-2100172 None:intergenic 30.0%
AAACGCATCAATGACTTTAG+TGG + chr1.1:2100559-2100578 None:intergenic 35.0%
AATAGAAGACATATCGGAGA+TGG - chr1.1:2100489-2100508 MS.gene24286:CDS 35.0%
ACGAAAATTGTTGGAAAAGG+GGG + chr1.1:2100738-2100757 None:intergenic 35.0%
ATATCGGAGATGGTGAATTT+AGG - chr1.1:2100499-2100518 MS.gene24286:CDS 35.0%
ATCAATTTCACCAACTCAGA+GGG - chr1.1:2101180-2101199 MS.gene24286:CDS 35.0%
CGATCTTTAGCTGATAAGTT+TGG + chr1.1:2101206-2101225 None:intergenic 35.0%
CGTTATCCCATAACAATTGA+AGG - chr1.1:2100755-2100774 MS.gene24286:CDS 35.0%
GATGATGTTGCTGAAATCAA+GGG - chr1.1:2101239-2101258 MS.gene24286:intron 35.0%
TATCGGAGATGGTGAATTTA+GGG - chr1.1:2100500-2100519 MS.gene24286:CDS 35.0%
TTGTTAACGGCGTTTATCAT+TGG - chr1.1:2101087-2101106 MS.gene24286:intron 35.0%
TTTGTCTCAAAGGTTTGTGT+TGG - chr1.1:2100795-2100814 MS.gene24286:CDS 35.0%
! TGATGATGTTGCTGAAATCA+AGG - chr1.1:2101238-2101257 MS.gene24286:intron 35.0%
! TTGATGGTCATATGATGCAA+GGG + chr1.1:2101435-2101454 None:intergenic 35.0%
! TTTAGGGTTAGACTTAGAGA+CGG - chr1.1:2100516-2100535 MS.gene24286:intron 35.0%
!! ATTTGAGCGCGTTTGTTATA+TGG + chr1.1:2100125-2100144 None:intergenic 35.0%
!! TGGGTAATGGATCATCAAAA+TGG - chr1.1:2101308-2101327 MS.gene24286:intron 35.0%
!!! AACGGTGTTTTTTGTCTCAA+AGG - chr1.1:2100785-2100804 MS.gene24286:CDS 35.0%
AAGAATGGTGATCAACTCCT+TGG - chr1.1:2101392-2101411 MS.gene24286:intron 40.0%
AGGGGGATTTGATGTGTATT+AGG + chr1.1:2100721-2100740 None:intergenic 40.0%
AGGTCCATCGTATACTTGTA+TGG - chr1.1:2100867-2100886 MS.gene24286:intron 40.0%
ATCAGAATTGAGAACGAACC+TGG + chr1.1:2100308-2100327 None:intergenic 40.0%
ATGATAGTAAAAGGAGGAGG+AGG + chr1.1:2101035-2101054 None:intergenic 40.0%
CGACGTGTGATGATAGTAAA+AGG + chr1.1:2101044-2101063 None:intergenic 40.0%
CGTGTGATGATAGTAAAAGG+AGG + chr1.1:2101041-2101060 None:intergenic 40.0%
CGTTGCGAAAGTTAAAGCAT+AGG + chr1.1:2101160-2101179 None:intergenic 40.0%
CTTGCATCATATGACCATCA+AGG - chr1.1:2101434-2101453 MS.gene24286:intron 40.0%
GATCAATTTCACCAACTCAG+AGG - chr1.1:2101179-2101198 MS.gene24286:CDS 40.0%
GTGATGATAGTAAAAGGAGG+AGG + chr1.1:2101038-2101057 None:intergenic 40.0%
TATGAACTATGTGCAGAAGC+AGG + chr1.1:2100263-2100282 None:intergenic 40.0%
TCAGATGTGTTCAACGATCT+TGG - chr1.1:2100578-2100597 MS.gene24286:intron 40.0%
! AGACTTAGAGACGGAGATTT+TGG - chr1.1:2100525-2100544 MS.gene24286:intron 40.0%
! ATTTTCGTATGTGCGGTCTT+TGG - chr1.1:2101369-2101388 MS.gene24286:intron 40.0%
! CTTGATGGTCATATGATGCA+AGG + chr1.1:2101436-2101455 None:intergenic 40.0%
AATGGTGATCAACTCCTTGG+AGG - chr1.1:2101395-2101414 MS.gene24286:intron 45.0%
ACTTTCCATCCTTTCCTCCA+AGG + chr1.1:2101412-2101431 None:intergenic 45.0%
AGAAGAACGAAGGGCTTCAA+AGG + chr1.1:2100166-2100185 None:intergenic 45.0%
ATAAGTTTGGCCCTCTGAGT+TGG + chr1.1:2101193-2101212 None:intergenic 45.0%
TCAGGCTACTATCGCTATGA+TGG - chr1.1:2101122-2101141 MS.gene24286:CDS 45.0%
TCTAGTTGTCGGGTTCAAGA+TGG + chr1.1:2100846-2100865 None:intergenic 45.0%
TGATCAACTCCTTGGAGGAA+AGG - chr1.1:2101400-2101419 MS.gene24286:intron 45.0%
! ATGTGCGGTCTTTGGAAGAA+TGG - chr1.1:2101377-2101396 MS.gene24286:intron 45.0%
!! TAGAGACGGAGATTTTGGTG+TGG - chr1.1:2100530-2100549 MS.gene24286:intron 45.0%
!!! TCACTTCGCGTTTTTTCTCC+AGG - chr1.1:2100287-2100306 MS.gene24286:CDS 45.0%
!! TATATATAAAATTTCATAAA+TGG - chr1.1:2100036-2100055 MS.gene24286:CDS 5.0%
ACAGCGTGAGAGAAGAACGA+AGG + chr1.1:2100176-2100195 None:intergenic 50.0%
CAACTCCTTGGAGGAAAGGA+TGG - chr1.1:2101404-2101423 MS.gene24286:intron 50.0%
CAGCGTGAGAGAAGAACGAA+GGG + chr1.1:2100175-2100194 None:intergenic 50.0%
CGATGGACCTCTCTAGTTGT+CGG + chr1.1:2100857-2100876 None:intergenic 50.0%
CTTGAACCCGACAACTAGAG+AGG - chr1.1:2100847-2100866 MS.gene24286:intron 50.0%
GAAGCAGGTTTAGCAGGCTT+AGG + chr1.1:2100248-2100267 None:intergenic 50.0%
GATGGACCTCTCTAGTTGTC+GGG + chr1.1:2100856-2100875 None:intergenic 50.0%
GCTGACAAAGGAGCAATGCT+TGG + chr1.1:2101527-2101546 None:intergenic 50.0%
GGCAAAGTGAGTTGCCTTGA+TGG + chr1.1:2101451-2101470 None:intergenic 50.0%
TGTGCAGAAGCAGGTTTAGC+AGG + chr1.1:2100254-2100273 None:intergenic 50.0%
! TCAGAGCCGCCTTTCTGAAA+CGG - chr1.1:2100612-2100631 MS.gene24286:intron 50.0%
!! AGCAGGCTTAGGCGTTGATT+TGG + chr1.1:2100237-2100256 None:intergenic 50.0%
AGGAGGAGGATGTCGAGTAG+GGG + chr1.1:2101021-2101040 None:intergenic 55.0%
CATGTGCCGCCGTTTCAGAA+AGG + chr1.1:2100624-2100643 None:intergenic 55.0%
GAGGAGGAGGATGTCGAGTA+GGG + chr1.1:2101022-2101041 None:intergenic 55.0%
!! TTGATTTGGCAACCACCGCG+AGG + chr1.1:2100223-2100242 None:intergenic 55.0%
GGAGGAGGAGGATGTCGAGT+AGG + chr1.1:2101023-2101042 None:intergenic 60.0%
GTGCCGCCGTTTCAGAAAGG+CGG + chr1.1:2100621-2100640 None:intergenic 60.0%
!! CATGGCGGAGAAACGGGTTG+CGG + chr1.1:2100200-2100219 None:intergenic 60.0%
!! GAGCCGCCTTTCTGAAACGG+CGG - chr1.1:2100615-2100634 MS.gene24286:intron 60.0%
CGTTTCTCCGCCATGCCTCG+CGG - chr1.1:2100205-2100224 MS.gene24286:CDS 65.0%
TTGGCAACCACCGCGAGGCA+TGG + chr1.1:2100218-2100237 None:intergenic 65.0%
! CGCGAGGCATGGCGGAGAAA+CGG + chr1.1:2100207-2100226 None:intergenic 65.0%
! GCGAGGCATGGCGGAGAAAC+GGG + chr1.1:2100206-2100225 None:intergenic 65.0%
GCAACCACCGCGAGGCATGG+CGG + chr1.1:2100215-2100234 None:intergenic 70.0%
TTCTCCGCCATGCCTCGCGG+TGG - chr1.1:2100208-2100227 MS.gene24286:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 2099847 2101550 2099847 ID=MS.gene24286
chr1.1 mRNA 2099847 2101550 2099847 ID=MS.gene24286.t1;Parent=MS.gene24286
chr1.1 exon 2101540 2101550 2101540 ID=MS.gene24286.t1.exon1;Parent=MS.gene24286.t1
chr1.1 CDS 2101540 2101550 2101540 ID=cds.MS.gene24286.t1;Parent=MS.gene24286.t1
chr1.1 exon 2101089 2101225 2101089 ID=MS.gene24286.t1.exon2;Parent=MS.gene24286.t1
chr1.1 CDS 2101089 2101225 2101089 ID=cds.MS.gene24286.t1;Parent=MS.gene24286.t1
chr1.1 exon 2100887 2100961 2100887 ID=MS.gene24286.t1.exon3;Parent=MS.gene24286.t1
chr1.1 CDS 2100887 2100961 2100887 ID=cds.MS.gene24286.t1;Parent=MS.gene24286.t1
chr1.1 exon 2100621 2100815 2100621 ID=MS.gene24286.t1.exon4;Parent=MS.gene24286.t1
chr1.1 CDS 2100621 2100815 2100621 ID=cds.MS.gene24286.t1;Parent=MS.gene24286.t1
chr1.1 exon 2099847 2100532 2099847 ID=MS.gene24286.t1.exon5;Parent=MS.gene24286.t1
chr1.1 CDS 2099847 2100532 2099847 ID=cds.MS.gene24286.t1;Parent=MS.gene24286.t1
Gene Sequence

>MS.gene24286

ATGATTTTTTTGTATTTCTTTTAATTTTAGCGGACATTTGTTTCAAGAATTAAAAAACTATTCTTAGAAATTGTGTACCTGAAAATAATTTAGCAATTCCTAAAAATATCGATAGTTCAAAAAAAAATATCGAAAGTTATAATTCTTTTATTTAAAAAATATATAAAATTTCATTTTTTTTTGACAAAATATATATAAAATTTCATAAATGGACATTATCACCTCATAAATCCATGAAATAATAGAAATTACCAAAAAGTATCGTAAATATCAAACCATATAACAAACGCGCTCAAATTATTCCCGCTAATTAAAACCTTTGAAGCCCTTCGTTCTTCTCTCACGCTGTGCCGCAACCCGTTTCTCCGCCATGCCTCGCGGTGGTTGCCAAATCAACGCCTAAGCCTGCTAAACCTGCTTCTGCACATAGTTCATATTCGTCACTTCGCGTTTTTTCTCCAGGTTCGTTCTCAATTCTGATTTTCATACTACGCTTTGAATCGTTAATTGAATCTTCTATGTTGAATCTTGCACTGTGAATTAATCTTCTATGTTTCATTGATTATATTTTTTTTTTTTGTGCTTATAGGTTTCTTGATTACAACTTGTTATCATCAAAACCATAACAATGAAAAAATTGAGAATAGAAGACATATCGGAGATGGTGAATTTAGGGTTAGACTTAGAGACGGAGATTTTGGTGTGGCTGCCACTAAAGTCATTGATGCGTTTCAGATGTGTTCAACGATCTTGGAATGATCTTATTCAGAGCCGCCTTTCTGAAACGGCGGCACATGAATATGTCTGATAGTCCTAGTCTCATGATAGTTAATGAAAAACAAAACTATGTAACTCTTCTCTCATGTGACAACCTAATACACATCAAATCCCCCTTTTCCAACAATTTTCGTTATCCCATAACAATTGAAGGTAGTTGTAACGGTGTTTTTTGTCTCAAAGGTTTGTGTTGGTTTAATAGTTGTGTACATGAGTTAGCCATCTTGAACCCGACAACTAGAGAGGTCCATCGTATACTTGTATGGTTTTGGTGCTGATGATTCCAACATCATCGATTTCAAAGTTGTGAAACTCTGTATCAATTATCATGTGACAAAACACAAACTTTATGTTTCATCAGCGGAAGTTTATAGTCTAATCACTAAATCATGGACCCCTACTCGACATCCTCCTCCTCCTTTTACTATCATCACACGTCGATGTCCCATCAAATATAACACTCTTGTTAACGGCGTTTATCATTGGATTACAAACAATTCAGGCTACTATCGCTATGATGGTGTTGCAAATATCCTATGCTTTAACTTTCGCAACGATCAATTTCACCAACTCAGAGGGCCAAACTTATCAGCTAAAGATCGATACTTTCTATGTGATGATGTTGCTGAAATCAAGGGTTTTCTTGCTTATGTTGTGCAGTGTCACTATAGCAACTTGAAAATTTGGGTAATGGATCATCAAAATGGATGGGAGAAAAAGTACAACATTGTCCCACCTTTGTTCAATTTTCGTATGTGCGGTCTTTGGAAGAATGGTGATCAACTCCTTGGAGGAAAGGATGGAAAGTCCCTTGCATCATATGACCATCAAGGCAACTCACTTTGCCAATTTCAAATTGATGTTAATTATACTATGAATTTCTGGATTCATGAGTATGTACCAAGCATTGCTCCTTTGTCAGCATAG
Protein sequence

>MS.gene24286.t1

MIFFPSFFSHAVPQPVSPPCLAVVAKSTPKPAKPASAHSSYSSLRVFSPGFLITTCYHQNHNNEKIENRRHIGDDVFNDLGMILFRAAFLKRRHMNMSDSPSLMIVNEKQNYVTLLSCDNLIHIKSPFSNNFRYPITIEERSIVYLYGFGADDSNIIDFKVVKLCINYHVTKHKLYVSSAEVYSLITKSWTPTRHPPPPFTIITRRCPIKYNTLVNGVYHWITNNSGYYRYDGVANILCFNFRNDQFHQLRGPNLSAKDRYFLCDDVAEIKGFLAYVVQCHYSNLKIWVMDHQNGWEKKYNIVPPLFNFRMCGLWKNGDQLLGGKDGKSLASYDHQGNSLCQFQIDVNYTMNFWIHEYVPSIAPLSA