AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033083


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033083.t1 MTR_4g109280 74.302 358 85 4 2 357 7 359 1.78e-176 494
MS.gene033083.t1 MTR_3g103020 63.661 366 119 9 1 357 18 378 5.41e-152 433
MS.gene033083.t1 MTR_3g034180 62.162 370 124 7 1 356 121 488 3.63e-151 435
MS.gene033083.t1 MTR_3g034130 62.185 357 120 5 1 343 7 362 1.08e-148 424
MS.gene033083.t1 MTR_3g034160 61.892 370 125 7 1 356 7 374 9.31e-147 419
MS.gene033083.t1 MTR_6g060650 63.342 371 115 8 2 356 7 372 1.93e-146 419
MS.gene033083.t1 MTR_4g109270 63.288 365 116 8 3 357 8 364 3.65e-146 417
MS.gene033083.t1 MTR_4g117850 62.849 358 118 9 2 350 22 373 2.62e-140 403
MS.gene033083.t1 MTR_4g122850 60.112 356 127 10 14 357 12 364 6.67e-135 389
MS.gene033083.t1 MTR_4g094365 57.650 366 139 8 1 357 6 364 3.29e-134 387
MS.gene033083.t1 MTR_4g117780 57.453 369 131 7 3 357 11 367 6.85e-133 384
MS.gene033083.t1 MTR_4g117770 58.378 370 128 7 2 357 10 367 1.13e-132 383
MS.gene033083.t1 MTR_4g117810 58.378 370 128 7 2 357 10 367 1.13e-132 383
MS.gene033083.t1 MTR_4g116330 57.808 365 139 7 2 357 22 380 5.11e-132 382
MS.gene033083.t1 MTR_4g117720 56.757 370 107 11 1 357 49 378 9.79e-130 376
MS.gene033083.t1 MTR_4g023080 56.667 360 139 7 1 356 7 353 2.90e-129 374
MS.gene033083.t1 MTR_4g023090 54.570 372 141 8 2 352 15 379 8.99e-128 372
MS.gene033083.t1 MTR_4g021785 55.833 360 145 5 1 357 7 355 3.85e-126 366
MS.gene033083.t1 MTR_5g097210 57.983 357 140 8 1 352 7 358 4.11e-124 362
MS.gene033083.t1 MTR_5g070130 55.464 366 148 7 2 354 10 373 4.28e-124 362
MS.gene033083.t1 MTR_4g118380 59.437 355 114 8 2 330 7 357 2.91e-122 357
MS.gene033083.t1 MTR_4g023070 50.938 373 162 6 1 356 1 369 1.82e-117 345
MS.gene033083.t1 MTR_8g433040 54.620 368 137 11 1 357 16 364 1.79e-116 342
MS.gene033083.t1 MTR_8g032380 54.620 368 137 11 1 357 16 364 1.79e-116 342
MS.gene033083.t1 MTR_1g055135 52.688 372 152 12 2 357 12 375 2.92e-114 337
MS.gene033083.t1 MTR_4g023380 51.421 387 135 7 2 357 15 379 4.25e-113 334
MS.gene033083.t1 MTR_4g023130 52.925 359 113 8 1 356 7 312 7.12e-113 331
MS.gene033083.t1 MTR_5g070080 52.356 382 147 9 1 354 8 382 1.25e-112 333
MS.gene033083.t1 MTR_4g023120 49.465 374 168 6 1 357 1 370 2.35e-112 332
MS.gene033083.t1 MTR_4g023440 51.801 361 124 7 2 357 17 332 7.53e-112 329
MS.gene033083.t1 MTR_8g032390 54.521 365 123 14 1 353 38 371 3.07e-110 327
MS.gene033083.t1 MTR_4g116330 52.055 365 121 7 2 357 22 341 3.47e-109 323
MS.gene033083.t1 MTR_4g117750 54.821 363 142 10 1 351 1 353 1.09e-107 324
MS.gene033083.t1 MTR_4g117750 65.094 106 35 1 249 352 373 478 9.49e-37 139
MS.gene033083.t1 MTR_5g070088 48.021 379 171 6 2 355 6 383 2.47e-106 317
MS.gene033083.t1 MTR_4g023190 54.670 364 142 11 1 355 8 357 5.20e-106 315
MS.gene033083.t1 MTR_4g023150 53.168 363 150 10 1 355 8 358 1.23e-102 306
MS.gene033083.t1 MTR_4g023200 53.026 347 143 10 17 355 24 358 2.42e-102 306
MS.gene033083.t1 MTR_8g013010 60.000 265 92 5 1 258 52 309 6.71e-101 301
MS.gene033083.t1 MTR_1g055165 48.760 363 126 11 2 357 9 318 1.45e-97 292
MS.gene033083.t1 MTR_8g433030 50.552 362 109 13 1 353 38 338 7.49e-94 283
MS.gene033083.t1 MTR_4g121580 49.863 365 131 14 1 347 9 339 5.81e-91 278
MS.gene033083.t1 MTR_1g055195 52.041 294 120 6 72 357 198 478 8.23e-88 273
MS.gene033083.t1 MTR_4g118400 51.748 286 98 8 76 351 39 294 1.92e-84 258
MS.gene033083.t1 MTR_4g117870 49.836 305 110 8 58 357 1 267 2.09e-84 257
MS.gene033083.t1 MTR_8g102520 41.918 365 156 10 1 357 6 322 1.42e-76 239
MS.gene033083.t1 MTR_7g079400 45.238 294 146 7 74 357 49 337 3.70e-75 236
MS.gene033083.t1 MTR_4g116320 60.369 217 77 6 143 354 43 255 3.16e-73 228
MS.gene033083.t1 MTR_7g079370 43.804 347 160 12 32 353 16 352 5.10e-73 231
MS.gene033083.t1 MTR_4g116340 54.506 233 75 7 2 223 35 247 5.21e-69 217
MS.gene033083.t1 MTR_2g048580 38.919 370 180 14 1 357 6 342 2.10e-68 218
MS.gene033083.t1 MTR_8g040935 57.843 204 79 4 160 357 6 208 4.03e-68 213
MS.gene033083.t1 MTR_4g118370 48.669 263 109 7 93 351 14 254 3.30e-67 213
MS.gene033083.t1 MTR_4g114700 43.969 257 89 5 100 348 9 218 5.40e-60 193
MS.gene033083.t1 MTR_6g463430 52.604 192 84 2 168 357 16 202 3.27e-58 187
MS.gene033083.t1 MTR_1g055175 52.239 201 85 8 164 357 5 201 1.84e-54 178
MS.gene033083.t1 MTR_4g117530 41.833 251 92 6 117 357 47 253 9.80e-50 167
MS.gene033083.t1 MTR_1g055250 44.444 234 116 10 118 344 27 253 1.07e-48 167
MS.gene033083.t1 MTR_4g117430 55.828 163 61 4 100 261 3 155 2.88e-47 157
MS.gene033083.t1 MTR_7g117720 47.291 203 78 5 2 195 9 191 9.27e-46 157
MS.gene033083.t1 MTR_7g117720 57.471 87 33 2 270 352 186 272 1.02e-20 90.9
MS.gene033083.t1 MTR_7g079420 39.711 277 112 11 99 357 905 1144 1.09e-45 167
MS.gene033083.t1 MTR_4g118360 64.655 116 37 2 244 357 13 126 1.27e-43 147
MS.gene033083.t1 MTR_5g023000 64.894 94 33 0 264 357 6 99 1.09e-36 128
MS.gene033083.t1 MTR_8g098830 46.667 165 79 6 168 327 35 195 1.37e-36 132
MS.gene033083.t1 MTR_1g094210 31.503 346 189 13 3 326 57 376 4.81e-36 135
MS.gene033083.t1 MTR_4g109290 49.677 155 49 4 2 154 8 135 4.82e-35 127
MS.gene033083.t1 MTR_4g109290 50.000 74 28 1 293 357 115 188 1.11e-12 66.2
MS.gene033083.t1 MTR_1g094210 30.081 369 209 14 3 349 57 398 9.41e-35 132
MS.gene033083.t1 MTR_5g069120 44.134 179 83 4 13 176 1 177 2.26e-33 122
MS.gene033083.t1 MTR_4g122860 39.631 217 91 8 153 357 132 320 2.27e-33 127
MS.gene033083.t1 MTR_4g122860 44.211 95 48 2 2 96 69 158 8.30e-12 65.9
MS.gene033083.t1 MTR_1g097490 29.670 364 219 13 2 349 48 390 1.29e-32 125
MS.gene033083.t1 MTR_4g107820 30.968 310 170 10 3 291 36 322 4.13e-32 124
MS.gene033083.t1 MTR_4g107780 30.968 310 170 10 3 291 36 322 4.13e-32 124
MS.gene033083.t1 MTR_4g108820 31.313 297 151 8 3 291 42 293 4.92e-32 122
MS.gene033083.t1 MTR_4g107820 30.968 310 170 10 3 291 36 322 5.75e-32 124
MS.gene033083.t1 MTR_4g107780 30.968 310 170 10 3 291 36 322 7.25e-32 124
MS.gene033083.t1 MTR_7g079450 46.809 141 69 3 218 357 2 137 9.39e-32 117
MS.gene033083.t1 MTR_2g021150 30.530 321 202 13 3 308 14 328 1.18e-31 122
MS.gene033083.t1 MTR_5g022420 31.879 298 167 14 3 287 27 301 4.03e-31 121
MS.gene033083.t1 MTR_2g021190 32.353 306 175 11 3 290 21 312 5.24e-30 118
MS.gene033083.t1 MTR_8g467140 31.731 312 179 14 1 294 30 325 6.15e-30 117
MS.gene033083.t1 MTR_8g101580 29.787 329 187 14 3 308 45 352 8.98e-30 118
MS.gene033083.t1 MTR_5g057690 30.945 307 177 13 3 297 46 329 1.66e-29 117
MS.gene033083.t1 MTR_2g021155 33.110 299 174 12 3 287 36 322 2.32e-29 119
MS.gene033083.t1 MTR_2g021155 25.909 220 142 9 93 298 689 901 1.35e-12 69.3
MS.gene033083.t1 MTR_1g097330 31.481 324 186 12 3 308 16 321 2.37e-29 117
MS.gene033083.t1 MTR_5g057790 31.529 314 176 14 3 297 46 339 2.67e-29 117
MS.gene033083.t1 MTR_3g007330 32.333 300 167 13 3 286 48 327 2.23e-28 114
MS.gene033083.t1 MTR_2g028160 30.000 360 197 19 2 318 4 351 2.44e-28 114
MS.gene033083.t1 MTR_1g056710 30.476 315 182 14 2 297 33 329 1.40e-27 112
MS.gene033083.t1 MTR_5g057710 31.310 313 174 15 3 295 46 337 1.72e-27 112
MS.gene033083.t1 MTR_3g036290 30.100 299 179 11 3 293 22 298 3.68e-27 110
MS.gene033083.t1 MTR_3g007410 30.818 318 183 13 6 304 55 354 6.70e-27 110
MS.gene033083.t1 MTR_3g006670 31.757 296 174 14 3 282 49 332 1.28e-26 109
MS.gene033083.t1 MTR_3g014540 29.299 314 181 11 3 294 29 323 1.35e-26 109
MS.gene033083.t1 MTR_2g055970 30.791 354 192 16 1 325 209 538 1.48e-26 110
MS.gene033083.t1 MTR_5g057020 30.065 306 176 13 3 297 46 324 1.78e-26 108
MS.gene033083.t1 MTR_1g097560 29.301 372 206 16 2 349 35 373 3.74e-26 107
MS.gene033083.t1 MTR_6g021880 29.808 312 180 10 14 299 31 329 4.04e-26 107
MS.gene033083.t1 MTR_3g010620 30.847 295 164 12 6 287 39 306 4.16e-26 108
MS.gene033083.t1 MTR_3g006570 31.229 301 176 12 3 287 21 306 4.37e-26 107
MS.gene033083.t1 MTR_3g036430 28.472 288 170 7 3 287 20 274 4.47e-26 107
MS.gene033083.t1 MTR_1g054725 28.070 342 207 14 2 324 19 340 1.35e-25 106
MS.gene033083.t1 MTR_3g007360 29.730 333 191 14 6 313 55 369 1.43e-25 106
MS.gene033083.t1 MTR_6g027910 29.032 310 182 10 6 287 12 311 1.57e-25 106
MS.gene033083.t1 MTR_3g010870 28.477 302 177 11 3 287 37 316 2.50e-25 105
MS.gene033083.t1 MTR_6g065980 29.682 283 180 9 3 282 16 282 2.75e-25 105
MS.gene033083.t1 MTR_1g068875 27.879 330 195 13 3 308 4 314 3.81e-25 105
MS.gene033083.t1 MTR_4g133170 26.970 330 197 13 3 308 4 313 3.99e-25 105
MS.gene033083.t1 MTR_2g029990 29.373 303 186 10 4 290 52 342 4.66e-25 105
MS.gene033083.t1 MTR_4g061340 29.126 309 175 11 3 286 26 315 5.06e-25 104
MS.gene033083.t1 MTR_4g030830 27.407 405 216 17 3 349 9 393 5.13e-25 105
MS.gene033083.t1 MTR_6g053240 28.664 307 184 10 3 287 28 321 5.14e-25 105
MS.gene033083.t1 MTR_4g037465 28.647 377 206 14 3 334 21 379 6.40e-25 104
MS.gene033083.t1 MTR_4g023430 62.353 85 31 1 1 84 39 123 7.99e-25 100
MS.gene033083.t1 MTR_4g023430 54.321 81 34 1 280 357 142 222 1.56e-20 89.4
MS.gene033083.t1 MTR_7g070830 28.338 367 190 14 3 308 21 375 9.13e-25 104
MS.gene033083.t1 MTR_5g011200 29.545 308 176 16 3 287 17 306 1.20e-24 103
MS.gene033083.t1 MTR_3g007430 28.713 303 174 11 6 286 46 328 1.26e-24 103
MS.gene033083.t1 MTR_3g083010 28.134 359 210 14 3 320 6 357 1.43e-24 103
MS.gene033083.t1 MTR_3g013770 28.896 308 194 8 3 294 33 331 1.93e-24 103
MS.gene033083.t1 MTR_2g078850 31.788 302 166 13 6 287 33 314 1.94e-24 103
MS.gene033083.t1 MTR_3g083640 26.933 375 219 16 3 349 55 402 2.64e-24 103
MS.gene033083.t1 MTR_2g028130 26.934 349 218 12 3 318 5 349 3.48e-24 102
MS.gene033083.t1 MTR_3g014570 27.619 315 187 10 3 295 29 324 3.77e-24 102
MS.gene033083.t1 MTR_3g010920 27.869 366 217 13 3 349 44 381 4.00e-24 102
MS.gene033083.t1 MTR_2g078900 31.699 306 164 16 3 287 33 314 4.21e-24 102
MS.gene033083.t1 MTR_7g407070 30.218 321 184 12 3 292 32 343 4.47e-24 102
MS.gene033083.t1 MTR_3g023930 27.614 373 205 13 3 349 34 367 4.59e-24 102
MS.gene033083.t1 MTR_7g070880 27.520 367 193 14 3 308 21 375 6.16e-24 102
MS.gene033083.t1 MTR_2g046830 28.947 304 180 12 6 291 28 313 6.24e-24 102
MS.gene033083.t1 MTR_0667s0010 26.765 340 210 13 2 312 5 334 6.37e-24 102
MS.gene033083.t1 MTR_2g104340 27.068 399 230 13 2 354 13 396 6.60e-24 102
MS.gene033083.t1 MTR_1g050542 29.861 288 178 12 3 281 58 330 9.68e-24 101
MS.gene033083.t1 MTR_2g426020 26.724 348 215 12 2 320 5 341 9.97e-24 101
MS.gene033083.t1 MTR_2g024110 27.559 381 233 17 3 354 4 370 1.20e-23 100
MS.gene033083.t1 MTR_3g010390 29.073 313 183 11 3 286 33 335 1.30e-23 101
MS.gene033083.t1 MTR_3g013740 28.788 330 174 13 3 294 44 350 1.44e-23 101
MS.gene033083.t1 MTR_6g086825 25.862 406 236 15 2 355 69 461 1.69e-23 101
MS.gene033083.t1 MTR_3g009310 31.579 304 169 12 3 286 42 326 1.70e-23 100
MS.gene033083.t1 MTR_2g426070 28.529 340 199 11 4 308 7 337 1.93e-23 100
MS.gene033083.t1 MTR_3g010590 26.757 370 225 13 3 349 39 385 2.24e-23 100
MS.gene033083.t1 MTR_2g028110 29.487 312 174 13 3 286 4 297 3.71e-23 99.8
MS.gene033083.t1 MTR_4g055060 30.744 309 172 14 3 286 30 321 5.41e-23 99.4
MS.gene033083.t1 MTR_4g031770 26.885 305 193 12 2 290 3 293 7.81e-23 98.6
MS.gene033083.t1 MTR_3g011060 29.618 314 176 11 3 287 28 325 9.24e-23 98.6
MS.gene033083.t1 MTR_5g007610 29.450 309 180 11 3 286 41 336 1.19e-22 98.6
MS.gene033083.t1 MTR_3g036335 25.072 347 205 12 3 328 41 353 1.26e-22 98.2
MS.gene033083.t1 MTR_3g030250 24.384 365 236 9 3 349 37 379 1.27e-22 98.2
MS.gene033083.t1 MTR_6g034720 48.800 125 55 5 123 241 53 174 1.32e-22 94.7
MS.gene033083.t1 MTR_0064s0160 25.799 407 230 15 2 357 41 426 1.38e-22 98.6
MS.gene033083.t1 MTR_1g054575 27.869 305 176 12 3 287 52 332 1.86e-22 99.0
MS.gene033083.t1 MTR_0044s0300 29.470 302 177 13 3 287 38 320 2.11e-22 97.4
MS.gene033083.t1 MTR_3g011100 29.934 304 172 12 3 282 235 521 2.48e-22 98.6
MS.gene033083.t1 MTR_2g046920 27.922 308 184 12 3 291 24 312 2.92e-22 97.1
MS.gene033083.t1 MTR_3g024110 29.966 297 177 15 3 287 101 378 3.27e-22 97.4
MS.gene033083.t1 MTR_1g115160 28.383 303 187 13 1 291 20 304 4.50e-22 96.3
MS.gene033083.t1 MTR_7g070440 30.351 313 181 12 5 291 9 310 4.74e-22 96.3
MS.gene033083.t1 MTR_3g010970 27.346 373 210 15 6 349 51 391 7.53e-22 95.9
MS.gene033083.t1 MTR_0760s0010 28.041 296 173 11 8 287 52 323 1.04e-21 95.5
MS.gene033083.t1 MTR_5g046300 25.824 364 236 13 3 349 4 350 1.08e-21 95.1
MS.gene033083.t1 MTR_5g046290 25.824 364 236 13 3 349 4 350 1.08e-21 95.1
MS.gene033083.t1 MTR_3g006500 25.867 375 228 13 3 349 17 369 1.17e-21 95.1
MS.gene033083.t1 MTR_2g025420 26.593 361 211 13 3 322 6 353 1.22e-21 95.9
MS.gene033083.t1 MTR_2g426090 28.182 330 188 13 6 299 9 325 2.26e-21 94.7
MS.gene033083.t1 MTR_4g070550 28.438 320 178 13 2 282 4 311 2.59e-21 94.7
MS.gene033083.t1 MTR_2g028140 27.103 321 187 12 2 282 4 317 2.89e-21 94.7
MS.gene033083.t1 MTR_3g010520 27.431 288 185 8 3 287 25 291 3.00e-21 94.0
MS.gene033083.t1 MTR_3g010430 30.503 318 158 14 3 287 36 323 3.04e-21 94.4
MS.gene033083.t1 MTR_6g053260 29.431 299 187 11 3 287 337 625 4.46e-21 95.1
MS.gene033083.t1 MTR_5g046260 25.071 351 202 14 3 349 4 297 5.61e-21 92.0
MS.gene033083.t1 MTR_1g068835 28.808 302 183 12 3 286 4 291 8.06e-21 92.8
MS.gene033083.t1 MTR_3g436150 28.261 368 189 15 3 332 32 362 9.39e-21 92.8
MS.gene033083.t1 MTR_2g021050 28.435 313 163 15 3 286 5 285 1.32e-20 92.4
MS.gene033083.t1 MTR_1g055375 25.600 375 241 15 2 349 3 366 1.33e-20 92.0
MS.gene033083.t1 MTR_2g021252 25.839 298 188 11 6 291 50 326 2.25e-20 91.7
MS.gene033083.t1 MTR_1g055070 28.736 261 157 10 2 237 48 304 2.73e-20 91.7
MS.gene033083.t1 MTR_2g021210 29.450 309 169 14 3 290 84 364 4.59e-20 91.3
MS.gene033083.t1 MTR_2g046900 27.476 313 187 14 3 291 28 324 5.08e-20 90.5
MS.gene033083.t1 MTR_4g122840 41.176 136 43 3 224 357 164 264 5.41e-20 88.6
MS.gene033083.t1 MTR_4g117550 24.679 389 228 14 2 355 16 374 6.72e-20 90.1
MS.gene033083.t1 MTR_7g055930 28.037 428 211 23 3 349 13 424 7.01e-20 90.5
MS.gene033083.t1 MTR_2g031640 26.239 343 220 13 3 324 6 336 7.40e-20 90.1
MS.gene033083.t1 MTR_5g009060 31.024 332 159 19 3 282 25 338 7.71e-20 90.1
MS.gene033083.t1 MTR_2g031720 28.116 345 215 15 3 324 6 340 7.71e-20 90.1
MS.gene033083.t1 MTR_5g059430 25.553 407 240 14 2 352 25 424 1.11e-19 90.1
MS.gene033083.t1 MTR_3g011020 26.380 326 170 11 3 296 28 315 1.21e-19 89.4
MS.gene033083.t1 MTR_1g068860 28.053 303 186 12 3 286 4 293 1.34e-19 89.4
MS.gene033083.t1 MTR_4g129190 26.404 356 196 15 3 308 6 345 1.77e-19 89.0
MS.gene033083.t1 MTR_4g024890 25.000 384 240 13 4 349 11 384 1.94e-19 89.0
MS.gene033083.t1 MTR_5g037680 26.209 393 227 16 2 349 7 381 1.95e-19 89.4
MS.gene033083.t1 MTR_3g009240 29.252 294 177 10 3 282 36 312 1.98e-19 89.0
MS.gene033083.t1 MTR_6g007135 27.213 305 193 9 3 287 26 321 2.82e-19 88.6
MS.gene033083.t1 MTR_3g030350 28.723 376 219 20 3 349 35 390 2.93e-19 88.6
MS.gene033083.t1 MTR_7g056820 27.005 374 198 17 3 327 7 354 4.16e-19 87.8
MS.gene033083.t1 MTR_2g047832 27.103 321 190 12 3 291 29 337 4.17e-19 88.2
MS.gene033083.t1 MTR_3g030240 25.166 302 177 9 3 287 40 309 4.72e-19 87.8
MS.gene033083.t1 MTR_8g464770 27.177 379 235 17 2 351 11 377 5.25e-19 87.8
MS.gene033083.t1 MTR_7g007300 27.451 306 178 12 3 290 103 382 5.81e-19 88.2
MS.gene033083.t1 MTR_6g048120 26.804 388 227 16 3 349 36 407 6.14e-19 87.8
MS.gene033083.t1 MTR_7g055870 28.037 428 211 23 3 349 13 424 8.08e-19 87.4
MS.gene033083.t1 MTR_7g077970 28.614 339 190 15 3 297 7 337 1.01e-18 87.0
MS.gene033083.t1 MTR_7g013590 29.703 303 176 12 6 287 39 325 1.12e-18 87.0
MS.gene033083.t1 MTR_8g099460 27.697 343 205 15 3 316 5 333 1.31e-18 86.7
MS.gene033083.t1 MTR_4g055820 26.667 330 193 11 2 286 13 338 1.48e-18 86.3
MS.gene033083.t1 MTR_8g013005 62.712 59 22 0 299 357 1 59 1.57e-18 79.0
MS.gene033083.t1 MTR_5g048160 25.000 392 251 13 2 353 3 391 1.65e-18 86.3
MS.gene033083.t1 MTR_2g024100 28.571 315 179 15 2 282 4 306 1.67e-18 86.3
MS.gene033083.t1 MTR_2g031680 25.566 309 183 11 3 286 6 292 1.72e-18 86.3
MS.gene033083.t1 MTR_5g069390 25.679 405 237 15 2 354 25 417 1.99e-18 86.7
MS.gene033083.t1 MTR_6g004660 29.276 304 182 9 3 282 16 310 3.24e-18 85.5
MS.gene033083.t1 MTR_2g425980 28.213 319 183 14 3 286 5 312 3.25e-18 85.5
MS.gene033083.t1 MTR_3g024150 27.451 306 172 10 6 287 38 317 3.43e-18 85.5
MS.gene033083.t1 MTR_7g055977 29.412 357 176 17 3 308 7 338 3.49e-18 85.1
MS.gene033083.t1 MTR_1g088120 28.660 321 177 15 6 284 13 323 4.13e-18 85.5
MS.gene033083.t1 MTR_3g030310 27.742 310 180 12 3 287 21 311 4.83e-18 85.1
MS.gene033083.t1 MTR_5g057643 31.278 227 125 10 3 212 46 258 6.36e-18 82.8
MS.gene033083.t1 MTR_6g048140 29.022 317 166 14 3 287 39 328 8.82e-18 84.3
MS.gene033083.t1 MTR_4g028510 27.778 396 223 19 6 352 19 400 8.95e-18 84.7
MS.gene033083.t1 MTR_6g478230 24.750 400 236 17 2 354 26 407 9.10e-18 84.3
MS.gene033083.t1 MTR_7g445890 26.225 347 192 13 3 308 16 339 1.28e-17 83.6
MS.gene033083.t1 MTR_3g072470 28.424 387 191 18 6 327 22 387 1.44e-17 84.0
MS.gene033083.t1 MTR_8g062660 25.243 309 193 10 3 287 22 316 1.83e-17 84.0
MS.gene033083.t1 MTR_7g078860 28.402 338 195 12 3 303 9 336 2.49e-17 82.8
MS.gene033083.t1 MTR_6g013270 29.180 305 188 14 3 290 29 322 2.80e-17 82.8
MS.gene033083.t1 MTR_5g096910 23.393 389 247 13 2 352 16 391 2.85e-17 82.8
MS.gene033083.t1 MTR_2g022000 26.882 372 202 17 2 312 15 377 3.14e-17 82.8
MS.gene033083.t1 MTR_3g006530 27.213 305 187 9 3 287 40 329 3.42e-17 82.4
MS.gene033083.t1 MTR_4g013180 27.247 356 191 13 3 308 11 348 3.61e-17 82.8
MS.gene033083.t1 MTR_3g007300 29.766 299 168 11 3 296 49 310 3.70e-17 82.0
MS.gene033083.t1 MTR_0267s0050 26.316 342 204 12 6 308 9 341 3.73e-17 82.4
MS.gene033083.t1 MTR_6g090180 24.685 397 243 11 2 350 46 434 3.92e-17 82.4
MS.gene033083.t1 MTR_7g061060 28.571 315 173 13 3 282 13 310 3.99e-17 82.4
MS.gene033083.t1 MTR_4g080200 29.435 248 150 7 1 236 1 235 4.40e-17 81.6
MS.gene033083.t1 MTR_3g096250 29.000 300 144 12 3 287 47 292 4.49e-17 81.6
MS.gene033083.t1 MTR_3g024040 26.644 289 196 10 10 295 38 313 5.29e-17 81.6
MS.gene033083.t1 MTR_3g007270 26.603 312 186 14 3 286 47 343 5.48e-17 82.0
MS.gene033083.t1 MTR_3g023940 24.728 368 238 11 3 349 34 383 5.62e-17 81.6
MS.gene033083.t1 MTR_0115s0020 24.000 400 246 13 2 353 9 398 7.50e-17 81.6
MS.gene033083.t1 MTR_7g028660 27.879 330 192 10 3 299 11 327 8.13e-17 81.3
MS.gene033083.t1 MTR_7g062060 28.024 339 191 13 3 296 12 342 8.17e-17 81.3
MS.gene033083.t1 MTR_7g056003 27.128 376 201 17 6 326 18 375 9.27e-17 81.3
MS.gene033083.t1 MTR_7g050520 29.747 316 161 15 3 282 22 312 1.00e-16 81.3
MS.gene033083.t1 MTR_5g023570 41.905 105 56 2 3 106 37 137 1.27e-16 76.3
MS.gene033083.t1 MTR_5g008530 64.407 59 19 1 1 59 16 72 1.39e-16 73.9
MS.gene033083.t1 MTR_8g073550 34.940 166 87 6 3 154 30 188 1.50e-16 78.6
MS.gene033083.t1 MTR_5g057040 33.146 178 92 7 3 162 46 214 1.83e-16 81.3
MS.gene033083.t1 MTR_2g043400 26.757 370 194 13 6 317 26 376 1.87e-16 80.5
MS.gene033083.t1 MTR_0129s0070 25.956 366 219 14 2 327 16 369 2.30e-16 80.1
MS.gene033083.t1 MTR_2g078870 29.268 246 149 11 113 349 78 307 2.32e-16 79.3
MS.gene033083.t1 MTR_2g426060 26.087 322 185 13 3 286 6 312 2.38e-16 80.1
MS.gene033083.t1 MTR_7g066030 25.369 406 226 20 1 350 19 403 2.38e-16 80.1
MS.gene033083.t1 MTR_3g030330 25.667 300 186 10 3 287 20 297 2.47e-16 79.7
MS.gene033083.t1 MTR_7g056760 24.745 392 240 15 3 349 23 404 2.50e-16 80.1
MS.gene033083.t1 MTR_7g017130 26.276 392 239 17 3 355 18 398 2.53e-16 80.1
MS.gene033083.t1 MTR_2g021950 26.817 399 222 22 2 350 15 393 2.58e-16 79.7
MS.gene033083.t1 MTR_2g038680 26.521 411 226 20 2 352 15 409 2.64e-16 80.1
MS.gene033083.t1 MTR_7g056503 25.193 389 237 15 3 349 21 397 2.74e-16 79.7
MS.gene033083.t1 MTR_6g034830 42.609 115 49 3 1 112 18 118 3.30e-16 74.3
MS.gene033083.t1 MTR_5g072060 28.134 359 207 18 2 327 5 345 3.60e-16 80.1
MS.gene033083.t1 MTR_2g025960 26.592 267 157 9 93 324 1 263 4.24e-16 78.6
MS.gene033083.t1 MTR_4g028660 25.253 396 234 14 2 350 15 395 4.41e-16 79.3
MS.gene033083.t1 MTR_4g027450 25.253 396 234 14 2 350 15 395 4.41e-16 79.3
MS.gene033083.t1 MTR_7g017170 28.354 328 189 16 3 291 18 338 5.56e-16 79.0
MS.gene033083.t1 MTR_0464s0020 27.059 340 185 14 6 295 26 352 5.67e-16 79.0
MS.gene033083.t1 MTR_5g069930 25.146 342 211 13 1 308 4 334 6.61e-16 78.6
MS.gene033083.t1 MTR_0097s0030 27.485 342 192 14 3 308 14 335 7.80e-16 78.6
MS.gene033083.t1 MTR_2g047240 27.485 342 192 14 3 308 14 335 7.80e-16 78.6
MS.gene033083.t1 MTR_3g013950 25.581 344 206 12 6 308 9 343 1.01e-15 78.2
MS.gene033083.t1 MTR_7g061050 27.356 329 182 16 3 295 13 320 1.02e-15 78.2
MS.gene033083.t1 MTR_7g035295 27.528 356 173 17 3 308 16 336 1.11e-15 77.8
MS.gene033083.t1 MTR_7g050480 29.747 316 161 15 3 282 22 312 1.21e-15 77.8
MS.gene033083.t1 MTR_7g060940 27.829 327 164 18 3 284 22 321 1.26e-15 77.8
MS.gene033083.t1 MTR_7g061090 24.922 321 189 10 3 282 22 331 1.49e-15 77.8
MS.gene033083.t1 MTR_0831s0010 25.831 391 226 18 2 350 49 417 1.57e-15 77.8
MS.gene033083.t1 MTR_1g055200 58.730 63 23 2 96 157 5 65 1.63e-15 72.0
MS.gene033083.t1 MTR_0054s0100 24.764 424 213 18 2 352 16 406 1.64e-15 77.4
MS.gene033083.t1 MTR_1g115185 25.723 311 203 10 3 297 39 337 1.74e-15 77.4
MS.gene033083.t1 MTR_1g061330 23.360 381 245 11 3 357 4 363 1.76e-15 77.4
MS.gene033083.t1 MTR_4g033495 26.611 357 199 15 3 311 27 368 1.80e-15 77.8
MS.gene033083.t1 MTR_0129s0050 24.566 403 247 12 2 354 13 408 1.81e-15 77.4
MS.gene033083.t1 MTR_1g055145 50.000 88 42 2 13 98 43 130 2.17e-15 75.9
MS.gene033083.t1 MTR_1g055145 47.297 74 36 2 201 273 131 202 6.08e-11 62.8
MS.gene033083.t1 MTR_6g079810 25.000 412 231 18 1 352 68 461 2.17e-15 77.4
MS.gene033083.t1 MTR_8g039500 28.302 371 185 18 2 328 11 344 2.56e-15 76.6
MS.gene033083.t1 MTR_3g080370 25.871 402 210 14 17 349 35 417 2.82e-15 77.0
MS.gene033083.t1 MTR_7g078040 28.107 338 176 15 3 284 9 335 2.86e-15 77.0
MS.gene033083.t1 MTR_7g057270 26.398 322 186 11 3 284 26 336 2.88e-15 77.0
MS.gene033083.t1 MTR_3g010870 28.507 221 124 8 3 208 37 238 2.98e-15 75.9
MS.gene033083.t1 MTR_5g068040 28.479 309 165 12 6 284 19 301 3.23e-15 76.6
MS.gene033083.t1 MTR_0128s0070 26.904 394 224 18 1 348 20 395 3.58e-15 76.6
MS.gene033083.t1 MTR_7g066000 26.513 347 201 18 3 308 25 358 3.89e-15 76.3
MS.gene033083.t1 MTR_7g067680 24.841 314 171 10 3 291 49 322 4.15e-15 76.3
MS.gene033083.t1 MTR_1g112930 24.324 296 198 9 3 287 25 305 4.38e-15 76.3
MS.gene033083.t1 MTR_4g019990 26.415 318 189 12 3 284 6 314 4.62e-15 76.3
MS.gene033083.t1 MTR_5g069760 26.023 342 197 16 3 308 6 327 5.02e-15 75.9
MS.gene033083.t1 MTR_3g058470 25.749 334 177 12 3 308 37 327 6.21e-15 75.5
MS.gene033083.t1 MTR_6g016285 24.938 405 238 14 3 349 21 417 6.63e-15 75.9
MS.gene033083.t1 MTR_3g058480 27.953 254 155 8 3 237 39 283 7.29e-15 75.1
MS.gene033083.t1 MTR_3g464500 27.887 355 185 18 3 308 27 359 7.69e-15 75.5
MS.gene033083.t1 MTR_5g096710 26.289 388 233 16 3 349 23 398 8.84e-15 75.5
MS.gene033083.t1 MTR_0242s0060 27.385 325 182 14 3 284 9 322 8.88e-15 75.5
MS.gene033083.t1 MTR_0242s0040 27.385 325 182 14 3 284 9 322 8.88e-15 75.5
MS.gene033083.t1 MTR_2g033410 27.491 291 172 13 4 274 10 281 1.16e-14 74.7
MS.gene033083.t1 MTR_1g114700 25.407 307 196 10 3 290 29 321 1.64e-14 74.3
MS.gene033083.t1 MTR_8g046310 25.974 308 195 11 2 286 15 312 1.70e-14 74.3
MS.gene033083.t1 MTR_7g055830 27.665 394 194 20 3 352 13 359 2.39e-14 73.9
MS.gene033083.t1 MTR_4g030760 25.000 344 190 13 3 308 73 386 3.09e-14 73.9
MS.gene033083.t1 MTR_1g007410 26.176 340 186 14 2 292 21 344 3.50e-14 73.6
MS.gene033083.t1 MTR_0134s0060 23.855 415 235 18 3 352 12 410 3.84e-14 73.6
MS.gene033083.t1 MTR_7g052150 27.900 319 170 14 3 284 22 317 3.95e-14 73.6
MS.gene033083.t1 MTR_7g066850 25.348 359 194 13 3 308 23 360 4.04e-14 73.6
MS.gene033083.t1 MTR_0128s0020 25.964 389 231 18 3 348 18 392 4.22e-14 73.2
MS.gene033083.t1 MTR_7g066100 28.135 327 176 14 1 282 9 321 4.46e-14 73.2
MS.gene033083.t1 MTR_2g104280 24.265 408 241 13 2 355 13 406 4.58e-14 73.2
MS.gene033083.t1 MTR_7g078840 27.479 353 194 13 1 297 8 354 4.80e-14 73.2
MS.gene033083.t1 MTR_8g012090 24.128 344 183 13 2 307 15 318 4.82e-14 72.8
MS.gene033083.t1 MTR_5g022090 25.846 325 185 12 2 300 33 327 8.27e-14 72.4
MS.gene033083.t1 MTR_4g030090 25.316 316 184 9 4 282 15 315 8.46e-14 72.4
MS.gene033083.t1 MTR_7g077990 26.730 318 173 13 3 282 17 312 9.20e-14 72.4
MS.gene033083.t1 MTR_6g017280 26.000 350 201 18 3 308 9 344 9.94e-14 72.0
MS.gene033083.t1 MTR_2g461450 25.767 326 209 11 3 308 18 330 1.01e-13 72.0
MS.gene033083.t1 MTR_7g056710 26.686 341 198 16 3 308 18 341 1.09e-13 72.0
MS.gene033083.t1 MTR_1g007450 26.667 360 213 15 3 320 12 362 1.09e-13 72.0
MS.gene033083.t1 MTR_6g055210 28.037 321 176 17 3 281 22 329 1.12e-13 72.0
MS.gene033083.t1 MTR_3g464470 25.758 396 222 19 3 349 7 379 1.33e-13 71.6
MS.gene033083.t1 MTR_6g080680 24.397 373 232 11 2 340 18 374 1.78e-13 71.2
MS.gene033083.t1 MTR_3g006640 27.391 230 132 9 97 304 20 236 2.81e-13 70.1
MS.gene033083.t1 MTR_0649s0020 27.523 327 169 16 3 284 11 314 3.07e-13 70.5
MS.gene033083.t1 MTR_1g442850 27.564 312 175 16 5 282 7 301 4.13e-13 70.1
MS.gene033083.t1 MTR_6g004210 26.074 326 193 15 14 297 36 355 5.25e-13 70.1
MS.gene033083.t1 MTR_6g014720 26.351 296 193 12 3 290 26 304 5.44e-13 69.7
MS.gene033083.t1 MTR_5g046280 23.664 262 179 8 98 349 3 253 5.98e-13 68.6
MS.gene033083.t1 MTR_5g096900 29.831 295 153 17 2 258 11 289 6.06e-13 69.3
MS.gene033083.t1 MTR_8g013000 27.855 359 199 16 2 313 9 354 6.73e-13 69.7
MS.gene033083.t1 MTR_2g047892 26.791 321 173 15 3 282 22 321 6.92e-13 69.7
MS.gene033083.t1 MTR_5g092850 25.414 362 217 16 6 324 19 370 6.95e-13 69.7
MS.gene033083.t1 MTR_2g031700 25.523 239 143 8 3 225 6 225 6.98e-13 68.9
MS.gene033083.t1 MTR_3g009260 29.730 296 164 17 6 282 44 314 7.97e-13 69.3
MS.gene033083.t1 MTR_8g066440 25.392 319 193 10 4 284 24 335 1.53e-12 68.6
MS.gene033083.t1 MTR_4g030110 24.688 320 174 14 3 286 30 318 1.74e-12 68.2
MS.gene033083.t1 MTR_5g043160 26.171 363 196 18 6 305 53 406 1.76e-12 68.6
MS.gene033083.t1 MTR_5g097680 23.404 423 237 16 6 355 20 428 2.27e-12 68.2
MS.gene033083.t1 MTR_7g050490 31.527 203 97 7 1 181 6 188 2.46e-12 65.5
MS.gene033083.t1 MTR_2g047200 26.667 405 208 21 3 349 20 393 2.74e-12 67.8
MS.gene033083.t1 MTR_7g066080 25.728 412 228 17 3 349 16 414 2.97e-12 67.8
MS.gene033083.t1 MTR_5g097350 24.866 374 231 17 12 350 25 383 4.07e-12 67.4
MS.gene033083.t1 MTR_4g007940 27.273 253 129 12 113 327 80 315 5.21e-12 66.6
MS.gene033083.t1 MTR_4g013185 24.523 367 205 12 6 308 13 371 5.21e-12 67.0
MS.gene033083.t1 MTR_7g017040 22.943 401 246 17 2 355 15 399 7.35e-12 66.6
MS.gene033083.t1 MTR_3g058440 27.490 251 134 11 3 225 35 265 9.17e-12 65.5
MS.gene033083.t1 MTR_7g056200 24.929 353 178 14 3 308 23 335 1.14e-11 65.9
MS.gene033083.t1 MTR_1g009110 27.635 351 214 15 3 326 14 351 1.34e-11 65.5
MS.gene033083.t1 MTR_5g056020 24.821 419 228 17 3 349 17 420 1.91e-11 65.5
MS.gene033083.t1 MTR_1g055065 27.488 211 122 8 97 287 20 219 1.93e-11 64.3
MS.gene033083.t1 MTR_6g461660 24.771 327 196 13 2 286 18 336 2.16e-11 65.1
MS.gene033083.t1 MTR_2g066150 22.785 395 220 19 1 354 10 360 2.28e-11 64.7
MS.gene033083.t1 MTR_7g052670 23.729 413 244 15 1 349 19 424 2.83e-11 64.7
MS.gene033083.t1 MTR_3g096280 26.736 288 155 15 15 282 17 268 2.94e-11 64.3
MS.gene033083.t1 MTR_7g079160 24.416 385 192 12 6 308 11 378 3.23e-11 64.7
MS.gene033083.t1 MTR_0129s0120 23.770 366 227 13 2 327 16 369 3.94e-11 64.3
MS.gene033083.t1 MTR_6g027890 26.667 195 117 5 113 287 73 261 6.49e-11 63.2
MS.gene033083.t1 MTR_1g097510 26.877 253 121 13 64 298 9 215 6.79e-11 62.8
MS.gene033083.t1 MTR_7g091640 26.875 320 182 15 3 284 35 340 8.08e-11 63.2
MS.gene033083.t1 MTR_4g013175 25.926 378 186 16 6 308 13 371 9.46e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033083.t1 AT3G23880 28.261 368 224 18 2 349 13 360 1.08e-22 98.2
MS.gene033083.t1 AT3G06240 26.301 365 210 13 3 320 36 388 1.35e-22 98.6
MS.gene033083.t1 AT4G12560 26.685 371 241 13 3 348 4 368 2.65e-21 94.7
MS.gene033083.t1 AT4G12560 26.685 371 241 13 3 348 4 368 2.65e-21 94.7
MS.gene033083.t1 AT4G12560 26.685 371 241 13 3 348 4 368 2.65e-21 94.7
MS.gene033083.t1 AT4G22390 27.077 325 201 16 4 303 5 318 2.46e-19 89.0
MS.gene033083.t1 AT4G22390 25.197 381 247 17 4 357 5 374 2.67e-19 89.0
MS.gene033083.t1 AT1G12870 25.000 396 230 20 3 348 33 411 7.71e-18 84.7
MS.gene033083.t1 AT2G40925 27.451 306 190 11 2 286 26 320 1.47e-17 83.6
MS.gene033083.t1 AT5G49610 28.049 328 178 16 4 302 10 308 1.89e-17 82.8
MS.gene033083.t1 AT1G33530 26.689 296 181 12 1 283 95 367 2.89e-17 83.2
MS.gene033083.t1 AT3G16590 29.206 315 183 18 2 292 4 302 4.43e-17 82.0
MS.gene033083.t1 AT5G62660 27.165 254 160 6 2 239 40 284 1.67e-15 77.4
MS.gene033083.t1 AT3G52320 25.424 354 212 17 2 332 26 350 4.02e-15 76.3
MS.gene033083.t1 AT1G47790 25.177 282 192 7 3 277 25 294 5.69e-15 75.9
MS.gene033083.t1 AT3G16210 28.980 245 136 11 3 236 5 222 5.97e-15 75.5
MS.gene033083.t1 AT3G21120 26.275 255 162 11 1 239 1 245 1.17e-14 74.7
MS.gene033083.t1 AT3G22720 24.262 305 181 10 3 279 5 287 3.29e-14 73.6
MS.gene033083.t1 AT4G19940 25.074 339 215 12 2 312 34 361 3.85e-14 73.6
MS.gene033083.t1 AT3G07870 22.442 303 206 7 3 282 28 324 4.99e-14 73.2
MS.gene033083.t1 AT1G11620 26.183 317 196 12 1 296 4 303 6.87e-14 72.4
MS.gene033083.t1 AT5G62510 25.779 353 215 14 3 335 44 369 1.24e-13 72.0
MS.gene033083.t1 AT2G21930 25.249 301 193 11 1 279 23 313 1.89e-13 71.2
MS.gene033083.t1 AT1G11270 28.000 250 147 9 3 240 35 263 1.93e-13 70.9
MS.gene033083.t1 AT1G11270 28.000 250 147 9 3 240 35 263 1.93e-13 70.9
MS.gene033083.t1 AT5G50220 25.237 317 179 12 3 308 33 302 2.61e-13 70.9
MS.gene033083.t1 AT3G49980 28.247 308 176 15 1 282 4 292 3.25e-13 70.5
MS.gene033083.t1 AT3G49980 28.247 308 176 15 1 282 3 291 3.27e-13 70.5
MS.gene033083.t1 AT1G13200 24.688 401 238 18 3 349 43 433 4.27e-13 70.5
MS.gene033083.t1 AT3G21410 25.163 306 196 11 3 293 38 325 5.75e-13 70.1
MS.gene033083.t1 AT3G47150 30.909 165 102 4 1 154 10 173 1.37e-12 68.6
MS.gene033083.t1 AT3G17480 24.768 323 169 16 3 284 12 301 1.67e-12 68.6
MS.gene033083.t1 AT1G30790 27.132 258 161 10 2 239 8 258 1.88e-12 68.2
MS.gene033083.t1 AT1G11270 30.481 187 114 6 3 177 35 217 4.70e-12 65.5
MS.gene033083.t1 AT3G10430 26.071 280 174 11 3 270 5 263 6.91e-12 66.6
MS.gene033083.t1 AT4G04690 27.426 237 133 10 3 225 11 222 9.73e-12 66.2
MS.gene033083.t1 AT3G44130 25.957 235 146 9 2 225 5 222 1.13e-11 65.5
MS.gene033083.t1 AT3G22650 25.649 308 197 14 3 293 9 301 1.74e-11 65.5
MS.gene033083.t1 AT3G22350 22.384 344 217 13 3 312 4 331 2.44e-11 64.7
MS.gene033083.t1 AT3G08750 25.965 285 169 12 3 273 12 268 3.55e-11 64.3
MS.gene033083.t1 AT3G17500 23.673 245 160 10 2 236 4 231 7.00e-11 63.5
MS.gene033083.t1 AT3G17500 23.673 245 160 10 2 236 3 230 7.61e-11 63.5

Find 66 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCTTTGACTTAA+TGG 0.096475 8.3:+15359973 MS.gene033083:CDS
CATTCTGATCTTGAAATTAA+AGG 0.128145 8.3:+15359584 MS.gene033083:CDS
TATTATGACTTGTGGGTATT+TGG 0.144797 8.3:+15360052 MS.gene033083:CDS
GAGACAAAGGTATTTGTTTA+TGG 0.179475 8.3:-15359676 None:intergenic
TTCTGTTATCTATATGGATT+TGG 0.194961 8.3:+15359716 MS.gene033083:CDS
AAATATTTCTGTTATCTATA+TGG 0.220309 8.3:+15359710 MS.gene033083:CDS
TATTCATGAGAGTTCAAATA+AGG 0.251780 8.3:-15359875 None:intergenic
ATGAAGAAATAGTTGAAATA+TGG 0.258814 8.3:+15360101 MS.gene033083:CDS
AGAGCAGGGTTCCTCTTTAA+TGG 0.277860 8.3:+15359905 MS.gene033083:CDS
GAGCAGGGTTCCTCTTTAAT+GGG 0.298920 8.3:+15359906 MS.gene033083:CDS
TCAGTTAAGAGATGATTATT+TGG 0.303270 8.3:+15359745 MS.gene033083:CDS
ATATAGATAACAGAAATATT+TGG 0.317013 8.3:-15359708 None:intergenic
ACTCTTGTCCTTCCTATTGA+TGG 0.321860 8.3:+15360163 MS.gene033083:CDS
TCTTTAATGGGGCTATTCAT+TGG 0.331439 8.3:+15359918 MS.gene033083:CDS
ACCCACAAGTCATAATAATT+AGG 0.339487 8.3:-15360046 None:intergenic
CAGAAATATTTGGAATCATT+AGG 0.343078 8.3:-15359698 None:intergenic
TTTCAAGATCAGAATGAGAT+TGG 0.354400 8.3:-15359577 None:intergenic
TCTGTTATCTATATGGATTT+GGG 0.362059 8.3:+15359717 MS.gene033083:CDS
AGATGGATTCCATAGATAAA+AGG 0.387292 8.3:-15359645 None:intergenic
TCCACATGGATTGTTGAAAT+AGG 0.391412 8.3:-15360305 None:intergenic
TGATCATAATTATTCACGTT+TGG 0.393675 8.3:+15359799 MS.gene033083:CDS
TCAAATCTGTTTGTAAGTCT+TGG 0.395043 8.3:+15359384 MS.gene033083:CDS
ACTTCACGGGCAACCTTAGT+AGG 0.402826 8.3:-15359349 None:intergenic
TGTTTATGGAGTCCAGTAGA+TGG 0.405916 8.3:-15359662 None:intergenic
TTCAAGATCAGAATGAGATT+GGG 0.414892 8.3:-15359576 None:intergenic
TAATGGGGCTATTCATTGGT+TGG 0.427301 8.3:+15359922 MS.gene033083:CDS
ATAGAACGAGTTTCAAGATC+TGG 0.428636 8.3:-15359497 None:intergenic
ATTCATGAGAGTTCAAATAA+GGG 0.442949 8.3:-15359874 None:intergenic
TGAGTTGGAATGCCATCAAT+AGG 0.444967 8.3:-15360175 None:intergenic
TGATGATTCAAATCCTACTA+AGG 0.448068 8.3:+15359336 MS.gene033083:CDS
ATCCTAATTATTATGACTTG+TGG 0.450172 8.3:+15360044 MS.gene033083:CDS
TCCTAATTATTATGACTTGT+GGG 0.453742 8.3:+15360045 MS.gene033083:CDS
TGAAGAAATAGTTGAAATAT+GGG 0.457924 8.3:+15360102 MS.gene033083:CDS
AGTCATAATAATTAGGATCA+TGG 0.483187 8.3:-15360039 None:intergenic
GAAATTAAAGGTTCCTGTAG+AGG 0.483626 8.3:+15359596 MS.gene033083:CDS
AAAATGTGAATTAGCAAAGT+GGG 0.489580 8.3:-15359426 None:intergenic
TATCTATGGAATCCATCTAC+TGG 0.493995 8.3:+15359650 MS.gene033083:CDS
AATACAAAGTGCATTCGTCT+TGG 0.494278 8.3:+15360134 MS.gene033083:CDS
GAAAATGTGAATTAGCAAAG+TGG 0.500384 8.3:-15359427 None:intergenic
CATGAATATAATCCTAGAGC+AGG 0.500843 8.3:+15359890 MS.gene033083:CDS
GAGACTCTGCTTTCACTCCC+TGG 0.504016 8.3:+15360349 MS.gene033083:CDS
TAAGCTTGCTCATTGCCACC+AGG 0.505650 8.3:-15360367 None:intergenic
GTTAAGAGATGATTATTTGG+TGG 0.511249 8.3:+15359748 MS.gene033083:CDS
ATCGGAACAGATGGTGGTAA+TGG 0.511515 8.3:+15360238 MS.gene033083:CDS
GAAACGTATAAGAGACTTCA+CGG 0.522128 8.3:-15359363 None:intergenic
AATGAATAGCCCCATTAAAG+AGG 0.526680 8.3:-15359916 None:intergenic
TTCAATCTACTATGATTCAT+CGG 0.538809 8.3:+15359772 MS.gene033083:CDS
TTGGTGAAGTACGATGAAAA+TGG 0.539569 8.3:+15360262 MS.gene033083:CDS
TTAAAGAGGAACCCTGCTCT+AGG 0.544781 8.3:-15359902 None:intergenic
AATGGGTAGAAGTACTGAGT+TGG 0.583626 8.3:-15360190 None:intergenic
GGTGATATTATCGGAACAGA+TGG 0.584795 8.3:+15360229 MS.gene033083:CDS
TTGGAATCATTAGGAGACAA+AGG 0.590925 8.3:-15359689 None:intergenic
TCAAGATCAGAATGAGATTG+GGG 0.591890 8.3:-15359575 None:intergenic
AACAGATGGTGGTAATGGAT+TGG 0.600231 8.3:+15360243 MS.gene033083:CDS
GATATTATCGGAACAGATGG+TGG 0.612210 8.3:+15360232 MS.gene033083:CDS
TTGGAATGCCATCAATAGGA+AGG 0.614361 8.3:-15360171 None:intergenic
TCCTATTTCAACAATCCATG+TGG 0.619417 8.3:+15360304 MS.gene033083:CDS
AAGCTTGCTCATTGCCACCA+GGG 0.620136 8.3:-15360366 None:intergenic
AGCAGGGTTCCTCTTTAATG+GGG 0.628387 8.3:+15359907 MS.gene033083:CDS
ATTTGAATCATCAATTCATG+AGG 0.630401 8.3:-15359326 None:intergenic
AAACGTATAAGAGACTTCAC+GGG 0.630702 8.3:-15359362 None:intergenic
CAATCCATGTGGATCTCGAG+CGG 0.652680 8.3:+15360315 MS.gene033083:CDS
ATGAATATAATCCTAGAGCA+GGG 0.656005 8.3:+15359891 MS.gene033083:CDS
ACTCTGCTTTCACTCCCTGG+TGG 0.675119 8.3:+15360352 MS.gene033083:CDS
TCTCATTGAGAGATAATACG+CGG 0.688649 8.3:+15359828 MS.gene033083:CDS
ATAGCCGCTCGAGATCCACA+TGG 0.696609 8.3:-15360319 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAGATAACAGAAATATT+TGG - chr8.3:15359711-15359730 None:intergenic 15.0%
!!! AAATATTTCTGTTATCTATA+TGG + chr8.3:15359710-15359729 MS.gene033083:CDS 15.0%
!! ATGAAGAAATAGTTGAAATA+TGG + chr8.3:15360101-15360120 MS.gene033083:CDS 20.0%
!! TGAAGAAATAGTTGAAATAT+GGG + chr8.3:15360102-15360121 MS.gene033083:CDS 20.0%
! AAAATGTGAATTAGCAAAGT+GGG - chr8.3:15359429-15359448 None:intergenic 25.0%
! ACAAAAAGTGGTGATATTAT+CGG + chr8.3:15360220-15360239 MS.gene033083:CDS 25.0%
! AGTCATAATAATTAGGATCA+TGG - chr8.3:15360042-15360061 None:intergenic 25.0%
! ATCCTAATTATTATGACTTG+TGG + chr8.3:15360044-15360063 MS.gene033083:CDS 25.0%
! ATTCATGAGAGTTCAAATAA+GGG - chr8.3:15359877-15359896 None:intergenic 25.0%
! ATTTGAATCATCAATTCATG+AGG - chr8.3:15359329-15359348 None:intergenic 25.0%
! CATTCTGATCTTGAAATTAA+AGG + chr8.3:15359584-15359603 MS.gene033083:CDS 25.0%
! TATTCATGAGAGTTCAAATA+AGG - chr8.3:15359878-15359897 None:intergenic 25.0%
! TCAGTTAAGAGATGATTATT+TGG + chr8.3:15359745-15359764 MS.gene033083:CDS 25.0%
! TCATGGTAAAAAATATCATC+CGG - chr8.3:15360025-15360044 None:intergenic 25.0%
! TCTGTTATCTATATGGATTT+GGG + chr8.3:15359717-15359736 MS.gene033083:CDS 25.0%
! TGATCATAATTATTCACGTT+TGG + chr8.3:15359799-15359818 MS.gene033083:CDS 25.0%
! TTCAATCTACTATGATTCAT+CGG + chr8.3:15359772-15359791 MS.gene033083:CDS 25.0%
! TTCTGTTATCTATATGGATT+TGG + chr8.3:15359716-15359735 MS.gene033083:CDS 25.0%
!! ACTTTTAGATATACATTTGC+CGG + chr8.3:15360003-15360022 MS.gene033083:CDS 25.0%
!! CAGAAATATTTGGAATCATT+AGG - chr8.3:15359701-15359720 None:intergenic 25.0%
!! TATTATTGCCTTTGACTTAA+TGG + chr8.3:15359973-15359992 MS.gene033083:CDS 25.0%
!! TCCTAATTATTATGACTTGT+GGG + chr8.3:15360045-15360064 MS.gene033083:CDS 25.0%
!! TTCACTAAACCTTAGATTTT+TGG + chr8.3:15359550-15359569 MS.gene033083:CDS 25.0%
!! TTTCTTTTCCATTAAGTCAA+AGG - chr8.3:15359984-15360003 None:intergenic 25.0%
ACCCACAAGTCATAATAATT+AGG - chr8.3:15360049-15360068 None:intergenic 30.0%
ATGAATATAATCCTAGAGCA+GGG + chr8.3:15359891-15359910 MS.gene033083:CDS 30.0%
CAAAAATATAAAGCCTCTAC+AGG - chr8.3:15359612-15359631 None:intergenic 30.0%
GAAAATGTGAATTAGCAAAG+TGG - chr8.3:15359430-15359449 None:intergenic 30.0%
GTTAAGAGATGATTATTTGG+TGG + chr8.3:15359748-15359767 MS.gene033083:CDS 30.0%
TCAAATCTGTTTGTAAGTCT+TGG + chr8.3:15359384-15359403 MS.gene033083:CDS 30.0%
TGATGATTCAAATCCTACTA+AGG + chr8.3:15359336-15359355 MS.gene033083:CDS 30.0%
TTCAAGATCAGAATGAGATT+GGG - chr8.3:15359579-15359598 None:intergenic 30.0%
TTTCAAGATCAGAATGAGAT+TGG - chr8.3:15359580-15359599 None:intergenic 30.0%
! AACTCGTTCTATAGATTTTG+AGG + chr8.3:15359508-15359527 MS.gene033083:CDS 30.0%
! AGATGGATTCCATAGATAAA+AGG - chr8.3:15359648-15359667 None:intergenic 30.0%
! TATTATGACTTGTGGGTATT+TGG + chr8.3:15360052-15360071 MS.gene033083:CDS 30.0%
!! GAGACAAAGGTATTTGTTTA+TGG - chr8.3:15359679-15359698 None:intergenic 30.0%
AAACGTATAAGAGACTTCAC+GGG - chr8.3:15359365-15359384 None:intergenic 35.0%
AATACAAAGTGCATTCGTCT+TGG + chr8.3:15360134-15360153 MS.gene033083:CDS 35.0%
AATGAATAGCCCCATTAAAG+AGG - chr8.3:15359919-15359938 None:intergenic 35.0%
ATAGAACGAGTTTCAAGATC+TGG - chr8.3:15359500-15359519 None:intergenic 35.0%
ATTGGGGATCCAAAAATCTA+AGG - chr8.3:15359562-15359581 None:intergenic 35.0%
CATGAATATAATCCTAGAGC+AGG + chr8.3:15359890-15359909 MS.gene033083:CDS 35.0%
GAAACGTATAAGAGACTTCA+CGG - chr8.3:15359366-15359385 None:intergenic 35.0%
GAAATTAAAGGTTCCTGTAG+AGG + chr8.3:15359596-15359615 MS.gene033083:CDS 35.0%
TATCTATGGAATCCATCTAC+TGG + chr8.3:15359650-15359669 MS.gene033083:CDS 35.0%
TCAAGATCAGAATGAGATTG+GGG - chr8.3:15359578-15359597 None:intergenic 35.0%
TCCTATTTCAACAATCCATG+TGG + chr8.3:15360304-15360323 MS.gene033083:CDS 35.0%
TCTCATTGAGAGATAATACG+CGG + chr8.3:15359828-15359847 MS.gene033083:CDS 35.0%
TCTTTAATGGGGCTATTCAT+TGG + chr8.3:15359918-15359937 MS.gene033083:CDS 35.0%
TTGGAATCATTAGGAGACAA+AGG - chr8.3:15359692-15359711 None:intergenic 35.0%
TTGGTGAAGTACGATGAAAA+TGG + chr8.3:15360262-15360281 MS.gene033083:CDS 35.0%
! GCTCTTCAACCTTTTATCTA+TGG + chr8.3:15359636-15359655 MS.gene033083:CDS 35.0%
! TCCACATGGATTGTTGAAAT+AGG - chr8.3:15360308-15360327 None:intergenic 35.0%
! TGGAGATTTTCTCAGTCTAT+GGG + chr8.3:15360072-15360091 MS.gene033083:CDS 35.0%
! TTGGAGATTTTCTCAGTCTA+TGG + chr8.3:15360071-15360090 MS.gene033083:CDS 35.0%
!! CACTTTTTGTACAGCACAAT+GGG - chr8.3:15360210-15360229 None:intergenic 35.0%
ACTCTTGTCCTTCCTATTGA+TGG + chr8.3:15360163-15360182 MS.gene033083:CDS 40.0%
CCATTGTGCTGTACAAAAAG+TGG + chr8.3:15360208-15360227 MS.gene033083:CDS 40.0%
GATATTATCGGAACAGATGG+TGG + chr8.3:15360232-15360251 MS.gene033083:CDS 40.0%
GGTGATATTATCGGAACAGA+TGG + chr8.3:15360229-15360248 MS.gene033083:CDS 40.0%
TAATGGGGCTATTCATTGGT+TGG + chr8.3:15359922-15359941 MS.gene033083:CDS 40.0%
TGTTTATGGAGTCCAGTAGA+TGG - chr8.3:15359665-15359684 None:intergenic 40.0%
TTGGAATGCCATCAATAGGA+AGG - chr8.3:15360174-15360193 None:intergenic 40.0%
! TGAGTTGGAATGCCATCAAT+AGG - chr8.3:15360178-15360197 None:intergenic 40.0%
!! AACAGATGGTGGTAATGGAT+TGG + chr8.3:15360243-15360262 MS.gene033083:CDS 40.0%
!! AATGGGTAGAAGTACTGAGT+TGG - chr8.3:15360193-15360212 None:intergenic 40.0%
!! TTTTCTCAGTCTATGGGCTA+TGG + chr8.3:15360078-15360097 MS.gene033083:CDS 40.0%
!!! CCACTTTTTGTACAGCACAA+TGG - chr8.3:15360211-15360230 None:intergenic 40.0%
AGAGCAGGGTTCCTCTTTAA+TGG + chr8.3:15359905-15359924 MS.gene033083:CDS 45.0%
AGCAGGGTTCCTCTTTAATG+GGG + chr8.3:15359907-15359926 MS.gene033083:CDS 45.0%
GAGCAGGGTTCCTCTTTAAT+GGG + chr8.3:15359906-15359925 MS.gene033083:CDS 45.0%
TTAAAGAGGAACCCTGCTCT+AGG - chr8.3:15359905-15359924 None:intergenic 45.0%
! ATCGGAACAGATGGTGGTAA+TGG + chr8.3:15360238-15360257 MS.gene033083:CDS 45.0%
ACTTCACGGGCAACCTTAGT+AGG - chr8.3:15359352-15359371 None:intergenic 50.0%
CAATCCATGTGGATCTCGAG+CGG + chr8.3:15360315-15360334 MS.gene033083:CDS 50.0%
! AAGCTTGCTCATTGCCACCA+GGG - chr8.3:15360369-15360388 None:intergenic 50.0%
! TAAGCTTGCTCATTGCCACC+AGG - chr8.3:15360370-15360389 None:intergenic 50.0%
ACTCTGCTTTCACTCCCTGG+TGG + chr8.3:15360352-15360371 MS.gene033083:CDS 55.0%
ATAGCCGCTCGAGATCCACA+TGG - chr8.3:15360322-15360341 None:intergenic 55.0%
GAGACTCTGCTTTCACTCCC+TGG + chr8.3:15360349-15360368 MS.gene033083:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 15359317 15360390 15359317 ID=MS.gene033083
chr8.3 mRNA 15359317 15360390 15359317 ID=MS.gene033083.t1;Parent=MS.gene033083
chr8.3 exon 15359317 15360390 15359317 ID=MS.gene033083.t1.exon1;Parent=MS.gene033083.t1
chr8.3 CDS 15359317 15360390 15359317 ID=cds.MS.gene033083.t1;Parent=MS.gene033083.t1
Gene Sequence

>MS.gene033083

ATGCATCTGCCTCATGAATTGATGATTCAAATCCTACTAAGGTTGCCCGTGAAGTCTCTTATACGTTTCAAATCTGTTTGTAAGTCTTGGTTTTCTCTTATCTCTGATTCCCACTTTGCTAATTCACATTTTCAAATTACTGCTGCAACACAGACTCGTAAAATTGTACTCATATCATATCCAGATCTTGAAACTCGTTCTATAGATTTTGAGGCATATGATTCTGCATCAGCTTCACTAAACCTTAGATTTTTGGATCCCCAATCTCATTCTGATCTTGAAATTAAAGGTTCCTGTAGAGGCTTTATATTTTTGCACTGCTCTTCAACCTTTTATCTATGGAATCCATCTACTGGACTCCATAAACAAATACCTTTGTCTCCTAATGATTCCAAATATTTCTGTTATCTATATGGATTTGGGTATGATCAGTTAAGAGATGATTATTTGGTGGTTTCAATCTACTATGATTCATCGGTAGTTGATCATAATTATTCACGTTTGGAGTTTTTCTCATTGAGAGATAATACGCGGAAAGAGCTCGACGATACTCACTTCCCTTATTTGAACTCTCATGAATATAATCCTAGAGCAGGGTTCCTCTTTAATGGGGCTATTCATTGGTTGGCTTTTCGTTATGATCTACAAAATGATGTTATTATTGCCTTTGACTTAATGGAAAAGAAACTTTTAGATATACATTTGCCGGATGATATTTTTTACCATGATCCTAATTATTATGACTTGTGGGTATTTGGAGATTTTCTCAGTCTATGGGCTATGGATGAAGAAATAGTTGAAATATGGGTTATGAAAGAATACAAAGTGCATTCGTCTTGGACTAAGACTCTTGTCCTTCCTATTGATGGCATTCCAACTCAGTACTTCTACCCATTGTGCTGTACAAAAAGTGGTGATATTATCGGAACAGATGGTGGTAATGGATTGGTGAAGTACGATGAAAATGGAGAATTACTAGACGTTCATTCCTATTTCAACAATCCATGTGGATCTCGAGCGGCTATGTATACTGAGACTCTGCTTTCACTCCCTGGTGGCAATGAGCAAGCTTAA

Protein sequence

>MS.gene033083.t1

MHLPHELMIQILLRLPVKSLIRFKSVCKSWFSLISDSHFANSHFQITAATQTRKIVLISYPDLETRSIDFEAYDSASASLNLRFLDPQSHSDLEIKGSCRGFIFLHCSSTFYLWNPSTGLHKQIPLSPNDSKYFCYLYGFGYDQLRDDYLVVSIYYDSSVVDHNYSRLEFFSLRDNTRKELDDTHFPYLNSHEYNPRAGFLFNGAIHWLAFRYDLQNDVIIAFDLMEKKLLDIHLPDDIFYHDPNYYDLWVFGDFLSLWAMDEEIVEIWVMKEYKVHSSWTKTLVLPIDGIPTQYFYPLCCTKSGDIIGTDGGNGLVKYDENGELLDVHSYFNNPCGSRAAMYTETLLSLPGGNEQA