AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035263


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035263.t1 MTR_5g097210 62.396 359 129 3 2 358 3 357 3.57e-152 433
MS.gene035263.t1 MTR_3g103020 59.030 371 136 10 1 363 13 375 3.54e-135 390
MS.gene035263.t1 MTR_1g055135 56.787 361 144 8 7 358 12 369 1.42e-126 369
MS.gene035263.t1 MTR_4g109270 55.200 375 142 8 1 363 1 361 1.81e-126 368
MS.gene035263.t1 MTR_4g117750 58.287 362 133 5 6 358 1 353 2.86e-125 369
MS.gene035263.t1 MTR_4g117750 54.128 109 46 3 258 362 373 481 3.16e-26 109
MS.gene035263.t1 MTR_3g034180 52.674 374 153 9 2 358 117 483 5.05e-121 358
MS.gene035263.t1 MTR_4g117850 54.717 371 144 11 4 363 19 376 1.69e-119 350
MS.gene035263.t1 MTR_3g034160 53.369 371 155 9 2 358 3 369 5.09e-118 347
MS.gene035263.t1 MTR_4g109280 54.595 370 149 11 1 363 1 358 2.45e-117 344
MS.gene035263.t1 MTR_3g034130 52.329 365 156 8 1 350 1 362 1.32e-116 343
MS.gene035263.t1 MTR_5g070080 52.344 384 148 11 2 358 4 379 1.98e-113 335
MS.gene035263.t1 MTR_4g117770 54.331 381 139 14 1 363 1 364 1.58e-109 325
MS.gene035263.t1 MTR_4g117810 54.331 381 139 14 1 363 1 364 1.58e-109 325
MS.gene035263.t1 MTR_4g023080 52.291 371 149 11 1 363 1 351 2.89e-108 321
MS.gene035263.t1 MTR_5g070088 50.649 385 157 11 1 358 1 379 1.41e-107 320
MS.gene035263.t1 MTR_5g070130 50.000 378 167 11 1 363 4 374 1.43e-105 315
MS.gene035263.t1 MTR_4g122850 52.247 356 149 12 18 359 11 359 2.84e-105 314
MS.gene035263.t1 MTR_6g060650 50.526 380 163 8 1 363 1 372 2.23e-104 312
MS.gene035263.t1 MTR_4g094365 48.533 375 169 11 1 363 1 363 2.44e-104 311
MS.gene035263.t1 MTR_4g021785 51.482 371 153 12 1 363 1 352 1.22e-103 309
MS.gene035263.t1 MTR_4g023070 49.077 379 160 11 6 363 1 367 4.27e-103 308
MS.gene035263.t1 MTR_4g023090 50.518 386 145 14 7 363 15 383 4.92e-103 309
MS.gene035263.t1 MTR_1g055195 61.538 273 87 5 94 358 210 472 1.66e-101 308
MS.gene035263.t1 MTR_4g117720 49.206 378 131 10 1 363 44 375 8.96e-100 300
MS.gene035263.t1 MTR_4g023120 48.794 373 160 11 6 357 1 363 1.87e-99 299
MS.gene035263.t1 MTR_4g117780 50.943 371 150 13 8 363 11 364 1.05e-98 297
MS.gene035263.t1 MTR_4g116330 50.802 374 159 14 2 363 17 377 1.73e-98 297
MS.gene035263.t1 MTR_4g023380 46.923 390 146 10 7 363 15 376 5.89e-95 288
MS.gene035263.t1 MTR_8g433040 48.780 369 151 12 4 358 14 358 8.14e-95 287
MS.gene035263.t1 MTR_8g032380 48.780 369 151 12 4 358 14 358 8.14e-95 287
MS.gene035263.t1 MTR_4g023150 49.735 378 150 13 2 363 4 357 3.40e-94 285
MS.gene035263.t1 MTR_4g118380 49.459 370 141 11 1 337 1 357 7.26e-94 284
MS.gene035263.t1 MTR_4g023190 49.606 381 145 14 2 363 4 356 1.03e-92 281
MS.gene035263.t1 MTR_4g023200 48.889 360 140 14 22 363 24 357 4.66e-90 275
MS.gene035263.t1 MTR_4g023130 46.774 372 127 12 1 363 1 310 1.09e-89 272
MS.gene035263.t1 MTR_8g032390 45.283 371 148 13 5 358 37 369 3.86e-85 263
MS.gene035263.t1 MTR_8g013010 53.285 274 110 7 1 267 47 309 5.57e-85 260
MS.gene035263.t1 MTR_4g118370 56.067 239 86 3 122 358 33 254 1.36e-83 254
MS.gene035263.t1 MTR_4g117870 47.508 301 112 7 64 358 1 261 1.06e-81 250
MS.gene035263.t1 MTR_1g055165 45.531 358 135 9 7 358 9 312 2.15e-81 251
MS.gene035263.t1 MTR_4g023440 44.628 363 145 12 7 363 17 329 5.44e-78 243
MS.gene035263.t1 MTR_4g116330 45.722 374 139 15 2 363 17 338 5.32e-77 241
MS.gene035263.t1 MTR_4g121580 44.898 343 141 12 5 331 8 318 1.29e-73 233
MS.gene035263.t1 MTR_8g433030 42.740 365 135 13 4 358 36 336 1.30e-70 224
MS.gene035263.t1 MTR_1g055250 58.291 199 77 4 145 340 49 244 9.45e-68 216
MS.gene035263.t1 MTR_7g079370 41.935 341 173 10 37 358 16 350 1.13e-65 212
MS.gene035263.t1 MTR_7g079400 44.816 299 148 8 77 363 43 336 2.20e-65 211
MS.gene035263.t1 MTR_1g055175 59.574 188 72 4 175 358 8 195 3.71e-64 203
MS.gene035263.t1 MTR_4g118400 39.566 369 137 12 1 358 1 294 2.11e-62 201
MS.gene035263.t1 MTR_2g048580 37.568 370 195 13 1 363 1 341 3.02e-58 192
MS.gene035263.t1 MTR_8g102520 34.973 366 180 10 1 358 1 316 2.97e-53 179
MS.gene035263.t1 MTR_4g116340 46.414 237 93 6 7 233 35 247 6.20e-51 170
MS.gene035263.t1 MTR_4g116320 46.789 218 99 4 150 358 43 252 2.54e-49 166
MS.gene035263.t1 MTR_8g040935 47.826 207 92 7 167 363 5 205 2.89e-46 157
MS.gene035263.t1 MTR_6g463430 47.596 208 89 7 164 363 4 199 6.81e-44 150
MS.gene035263.t1 MTR_4g117530 42.009 219 83 6 142 358 71 247 5.18e-41 145
MS.gene035263.t1 MTR_4g114700 37.597 258 101 6 110 355 9 218 2.49e-39 140
MS.gene035263.t1 MTR_7g079420 37.722 281 105 11 109 362 905 1142 7.21e-37 142
MS.gene035263.t1 MTR_4g117430 47.273 165 65 4 110 267 3 152 1.27e-36 130
MS.gene035263.t1 MTR_4g118360 56.075 107 45 1 255 359 15 121 7.51e-34 122
MS.gene035263.t1 MTR_7g117720 44.059 202 76 9 7 197 9 184 1.46e-32 123
MS.gene035263.t1 MTR_5g069120 45.055 182 78 6 19 184 2 177 1.91e-32 120
MS.gene035263.t1 MTR_2g021150 29.144 374 221 18 7 355 13 367 8.53e-32 123
MS.gene035263.t1 MTR_4g055060 31.494 308 175 12 8 295 30 321 5.23e-31 121
MS.gene035263.t1 MTR_4g109290 45.930 172 49 8 1 163 1 137 4.23e-30 114
MS.gene035263.t1 MTR_5g057790 30.458 371 211 16 8 355 46 392 1.76e-29 117
MS.gene035263.t1 MTR_8g098830 41.143 175 97 4 176 347 35 206 1.32e-28 111
MS.gene035263.t1 MTR_5g011200 29.712 313 183 12 3 296 12 306 8.53e-28 112
MS.gene035263.t1 MTR_1g054725 28.836 378 216 16 8 355 20 374 1.87e-27 111
MS.gene035263.t1 MTR_8g467140 31.126 302 184 12 6 296 30 318 3.51e-27 110
MS.gene035263.t1 MTR_3g072470 28.538 424 195 16 11 355 22 416 3.94e-27 111
MS.gene035263.t1 MTR_1g094210 29.086 361 182 16 7 333 56 376 9.60e-27 110
MS.gene035263.t1 MTR_2g025420 29.700 367 193 15 8 325 6 356 1.54e-26 109
MS.gene035263.t1 MTR_7g056390 30.792 341 146 13 11 293 21 329 1.56e-26 109
MS.gene035263.t1 MTR_1g068835 31.169 308 172 14 8 295 4 291 2.06e-26 108
MS.gene035263.t1 MTR_2g021190 30.409 342 201 15 8 329 21 345 2.23e-26 108
MS.gene035263.t1 MTR_1g097490 29.700 367 219 14 5 355 46 389 5.82e-26 107
MS.gene035263.t1 MTR_1g068875 28.274 336 196 13 8 319 4 318 6.37e-26 107
MS.gene035263.t1 MTR_1g056710 30.097 309 173 11 8 296 34 319 1.30e-25 106
MS.gene035263.t1 MTR_2g055970 31.073 354 195 18 5 332 208 538 3.43e-25 107
MS.gene035263.t1 MTR_1g094210 28.232 379 205 17 7 355 56 397 3.60e-25 105
MS.gene035263.t1 MTR_2g021050 32.698 315 151 17 8 295 5 285 3.88e-25 105
MS.gene035263.t1 MTR_8g101580 27.988 343 214 14 8 332 45 372 4.15e-25 105
MS.gene035263.t1 MTR_6g027910 31.056 322 172 14 11 300 12 315 4.26e-25 105
MS.gene035263.t1 MTR_2g029990 27.793 367 228 14 9 355 52 401 4.32e-25 105
MS.gene035263.t1 MTR_4g061340 27.941 340 204 12 8 326 26 345 5.53e-25 104
MS.gene035263.t1 MTR_3g007330 30.820 305 169 12 8 295 48 327 6.37e-25 104
MS.gene035263.t1 MTR_4g108820 30.508 295 154 11 7 296 41 289 1.35e-24 102
MS.gene035263.t1 MTR_4g133170 29.254 335 187 13 8 316 4 314 1.39e-24 103
MS.gene035263.t1 MTR_1g097560 27.954 347 204 14 5 332 33 352 1.61e-24 103
MS.gene035263.t1 MTR_7g056290 31.378 341 144 16 11 293 25 333 2.59e-24 103
MS.gene035263.t1 MTR_5g023000 53.763 93 39 2 273 363 6 96 5.65e-24 95.1
MS.gene035263.t1 MTR_2g046900 27.298 359 207 15 7 332 27 364 5.67e-24 102
MS.gene035263.t1 MTR_4g107820 27.793 367 228 12 8 355 36 384 5.68e-24 102
MS.gene035263.t1 MTR_4g107780 27.793 367 228 12 8 355 36 384 5.68e-24 102
MS.gene035263.t1 MTR_1g068860 30.844 308 175 14 8 295 4 293 6.03e-24 102
MS.gene035263.t1 MTR_7g070880 27.119 413 222 19 8 355 21 419 6.21e-24 102
MS.gene035263.t1 MTR_4g107780 27.793 367 228 12 8 355 36 384 6.74e-24 102
MS.gene035263.t1 MTR_4g107820 28.797 316 195 10 8 311 36 333 7.87e-24 102
MS.gene035263.t1 MTR_3g009240 31.633 294 174 11 8 291 36 312 7.97e-24 101
MS.gene035263.t1 MTR_3g014540 29.739 306 180 15 8 296 29 316 1.26e-23 100
MS.gene035263.t1 MTR_7g079450 44.776 134 65 3 229 358 3 131 1.42e-23 95.1
MS.gene035263.t1 MTR_7g070830 28.726 369 190 17 8 316 21 376 1.89e-23 100
MS.gene035263.t1 MTR_2g078900 30.293 307 171 13 8 296 33 314 1.95e-23 100
MS.gene035263.t1 MTR_3g036290 30.945 307 168 14 8 300 22 298 1.98e-23 100
MS.gene035263.t1 MTR_7g056003 27.869 366 179 15 11 316 18 358 2.58e-23 100
MS.gene035263.t1 MTR_5g057710 30.000 310 180 14 8 300 46 335 4.23e-23 99.8
MS.gene035263.t1 MTR_0464s0020 28.409 440 198 19 3 355 18 427 4.26e-23 100
MS.gene035263.t1 MTR_6g013270 28.889 315 192 12 7 304 28 327 4.66e-23 99.8
MS.gene035263.t1 MTR_3g437520 28.680 394 172 16 3 316 18 382 5.15e-23 100
MS.gene035263.t1 MTR_3g010390 29.154 319 179 14 8 295 33 335 5.29e-23 99.4
MS.gene035263.t1 MTR_3g006670 31.148 305 168 14 8 291 49 332 5.81e-23 99.4
MS.gene035263.t1 MTR_3g009310 32.131 305 170 17 8 295 42 326 6.61e-23 99.0
MS.gene035263.t1 MTR_2g046920 27.011 348 214 13 7 332 23 352 6.63e-23 99.0
MS.gene035263.t1 MTR_2g104340 26.098 387 237 14 8 355 14 390 6.81e-23 99.4
MS.gene035263.t1 MTR_6g004660 26.954 371 241 13 8 355 16 379 8.11e-23 98.6
MS.gene035263.t1 MTR_5g046300 29.139 302 170 13 8 291 4 279 1.01e-22 98.2
MS.gene035263.t1 MTR_5g046290 29.139 302 170 13 8 291 4 279 1.01e-22 98.2
MS.gene035263.t1 MTR_2g028140 27.469 324 184 13 8 291 5 317 1.21e-22 98.6
MS.gene035263.t1 MTR_3g007430 29.355 310 177 13 11 300 46 333 1.52e-22 98.2
MS.gene035263.t1 MTR_4g122860 35.294 187 85 6 180 358 156 314 1.54e-22 97.4
MS.gene035263.t1 MTR_4g122860 50.000 92 40 3 1 89 60 148 6.90e-13 69.3
MS.gene035263.t1 MTR_4g031770 26.490 302 194 9 8 296 4 290 1.78e-22 97.4
MS.gene035263.t1 MTR_3g083010 27.763 371 202 18 8 329 6 359 2.03e-22 98.2
MS.gene035263.t1 MTR_1g097330 28.990 307 176 13 8 296 16 298 2.19e-22 97.8
MS.gene035263.t1 MTR_5g022420 30.897 301 172 16 7 296 26 301 2.25e-22 97.4
MS.gene035263.t1 MTR_4g030830 26.952 397 228 17 8 355 9 392 2.29e-22 97.4
MS.gene035263.t1 MTR_3g007410 27.812 320 192 13 11 311 55 354 2.51e-22 97.4
MS.gene035263.t1 MTR_1g115160 28.620 297 188 12 6 296 20 298 2.61e-22 97.1
MS.gene035263.t1 MTR_7g070440 30.000 320 173 15 7 295 6 305 2.85e-22 97.1
MS.gene035263.t1 MTR_1g058190 29.545 308 177 11 8 304 35 313 3.69e-22 96.7
MS.gene035263.t1 MTR_5g057690 28.412 359 224 13 8 355 46 382 3.78e-22 97.1
MS.gene035263.t1 MTR_8g046310 26.984 378 225 14 11 358 19 375 3.84e-22 96.7
MS.gene035263.t1 MTR_3g013740 31.481 324 175 17 5 299 41 346 3.96e-22 97.1
MS.gene035263.t1 MTR_3g007360 27.778 324 187 14 11 311 55 354 4.03e-22 97.1
MS.gene035263.t1 MTR_1g114700 27.922 308 185 8 8 296 29 318 4.09e-22 96.7
MS.gene035263.t1 MTR_8g073550 35.979 189 110 6 7 188 29 213 4.58e-22 94.0
MS.gene035263.t1 MTR_0667s0010 28.527 319 179 11 8 295 6 306 9.36e-22 95.9
MS.gene035263.t1 MTR_3g083640 29.967 307 171 14 8 296 55 335 9.41e-22 95.9
MS.gene035263.t1 MTR_3g023930 29.730 296 171 11 8 296 34 299 9.86e-22 95.5
MS.gene035263.t1 MTR_5g057020 30.492 305 178 14 8 304 46 324 1.13e-21 95.1
MS.gene035263.t1 MTR_2g426090 29.483 329 161 16 11 295 9 310 1.51e-21 95.5
MS.gene035263.t1 MTR_2g021155 29.766 299 188 10 8 296 36 322 1.64e-21 96.7
MS.gene035263.t1 MTR_6g065980 29.667 300 162 13 8 291 16 282 2.37e-21 94.4
MS.gene035263.t1 MTR_2g021210 27.164 335 210 13 8 329 84 397 2.80e-21 94.7
MS.gene035263.t1 MTR_4g024890 30.719 306 182 14 7 291 9 305 5.94e-21 93.6
MS.gene035263.t1 MTR_3g024110 28.000 300 183 11 8 296 101 378 7.69e-21 93.6
MS.gene035263.t1 MTR_5g069760 26.374 364 220 15 4 335 2 349 7.94e-21 92.8
MS.gene035263.t1 MTR_5g007610 31.230 317 168 16 8 295 41 336 8.23e-21 93.2
MS.gene035263.t1 MTR_3g014570 27.887 355 214 15 8 338 29 365 8.41e-21 92.8
MS.gene035263.t1 MTR_5g069930 26.149 348 204 16 6 316 4 335 1.05e-20 92.8
MS.gene035263.t1 MTR_4g129190 26.781 407 213 18 8 354 6 387 1.41e-20 92.4
MS.gene035263.t1 MTR_1g055200 54.321 81 35 1 106 184 5 85 1.57e-20 85.9
MS.gene035263.t1 MTR_2g028110 26.519 362 197 13 8 331 4 334 1.96e-20 92.0
MS.gene035263.t1 MTR_1g055070 27.622 286 164 11 8 262 49 322 2.22e-20 92.0
MS.gene035263.t1 MTR_7g007300 28.105 306 174 12 8 296 103 379 2.32e-20 92.4
MS.gene035263.t1 MTR_4g023430 54.839 93 38 2 2 94 35 123 2.58e-20 88.6
MS.gene035263.t1 MTR_4g023430 44.444 81 38 3 288 363 141 219 2.45e-11 63.2
MS.gene035263.t1 MTR_3g436150 32.063 315 164 17 8 291 32 327 2.61e-20 91.7
MS.gene035263.t1 MTR_3g010590 27.000 300 181 12 8 296 39 311 2.71e-20 91.7
MS.gene035263.t1 MTR_0044s0300 29.085 306 177 12 8 296 38 320 3.26e-20 91.3
MS.gene035263.t1 MTR_2g021770 26.185 401 240 16 11 363 15 407 3.73e-20 91.3
MS.gene035263.t1 MTR_6g053260 28.155 309 200 10 8 305 337 634 3.87e-20 92.4
MS.gene035263.t1 MTR_2g031720 27.198 364 198 15 7 331 5 340 4.08e-20 91.3
MS.gene035263.t1 MTR_2g024110 25.937 347 205 16 8 325 4 327 4.71e-20 90.9
MS.gene035263.t1 MTR_7g445890 25.843 356 190 12 6 316 14 340 5.41e-20 90.5
MS.gene035263.t1 MTR_7g066000 28.571 315 189 12 5 291 22 328 6.17e-20 90.9
MS.gene035263.t1 MTR_2g426060 27.692 325 180 15 8 295 6 312 6.34e-20 90.9
MS.gene035263.t1 MTR_2g426070 27.187 320 187 12 9 295 7 313 6.57e-20 90.5
MS.gene035263.t1 MTR_2g021252 27.405 343 190 15 11 329 50 357 6.59e-20 90.5
MS.gene035263.t1 MTR_2g026010 29.032 310 182 11 8 295 4 297 7.13e-20 90.5
MS.gene035263.t1 MTR_6g021880 28.226 372 212 19 18 355 30 380 7.43e-20 90.1
MS.gene035263.t1 MTR_3g013770 30.968 310 175 16 8 296 33 324 8.89e-20 90.1
MS.gene035263.t1 MTR_3g030330 28.188 298 185 11 8 296 20 297 8.97e-20 89.7
MS.gene035263.t1 MTR_3g030250 26.214 309 174 13 8 296 37 311 1.13e-19 89.7
MS.gene035263.t1 MTR_7g407070 29.321 324 167 15 8 291 32 333 1.19e-19 89.7
MS.gene035263.t1 MTR_2g046830 29.139 302 188 12 7 297 24 310 1.29e-19 89.7
MS.gene035263.t1 MTR_7g055987 27.628 333 191 11 11 313 23 335 1.84e-19 89.0
MS.gene035263.t1 MTR_1g055055 28.808 302 171 14 8 297 26 295 2.70e-19 88.2
MS.gene035263.t1 MTR_5g046260 27.645 293 156 13 8 291 4 249 2.90e-19 87.4
MS.gene035263.t1 MTR_7g055930 26.027 438 221 20 1 355 6 423 3.50e-19 88.6
MS.gene035263.t1 MTR_8g064890 25.575 391 240 20 7 363 15 388 4.22e-19 88.2
MS.gene035263.t1 MTR_3g010920 25.490 357 215 12 8 338 44 375 4.35e-19 88.2
MS.gene035263.t1 MTR_3g010620 26.846 298 178 10 11 297 39 307 4.35e-19 88.2
MS.gene035263.t1 MTR_2g047832 26.525 377 199 19 7 332 28 377 4.94e-19 88.2
MS.gene035263.t1 MTR_3g006500 26.984 315 186 12 2 296 11 301 4.98e-19 87.8
MS.gene035263.t1 MTR_7g057270 30.793 328 168 15 8 293 26 336 5.49e-19 88.2
MS.gene035263.t1 MTR_3g036430 27.852 298 163 9 8 296 20 274 6.71e-19 87.0
MS.gene035263.t1 MTR_3g010520 28.247 308 161 16 8 296 25 291 6.93e-19 87.0
MS.gene035263.t1 MTR_1g115185 27.419 310 194 10 3 296 33 327 7.13e-19 87.4
MS.gene035263.t1 MTR_3g096250 28.000 300 151 10 8 296 47 292 8.15e-19 86.7
MS.gene035263.t1 MTR_0760s0010 26.519 362 222 13 13 355 52 388 8.95e-19 87.0
MS.gene035263.t1 MTR_2g031680 25.843 356 204 14 8 331 6 333 9.10e-19 87.0
MS.gene035263.t1 MTR_7g056170 26.087 437 197 21 1 355 66 458 1.06e-18 87.4
MS.gene035263.t1 MTR_0115s0020 24.235 392 249 14 8 357 10 395 1.08e-18 87.0
MS.gene035263.t1 MTR_2g031640 27.247 356 202 13 8 331 6 336 1.09e-18 87.0
MS.gene035263.t1 MTR_7g062060 26.551 403 227 18 7 355 11 398 1.50e-18 86.7
MS.gene035263.t1 MTR_1g112930 29.276 304 177 14 8 296 25 305 1.55e-18 86.3
MS.gene035263.t1 MTR_7g055870 25.959 443 215 19 1 355 6 423 1.71e-18 86.7
MS.gene035263.t1 MTR_2g024100 27.632 304 166 11 23 291 22 306 2.47e-18 85.9
MS.gene035263.t1 MTR_4g019990 27.515 338 194 16 5 306 3 325 3.97e-18 85.1
MS.gene035263.t1 MTR_2g047200 26.440 382 208 18 6 337 18 376 3.99e-18 85.5
MS.gene035263.t1 MTR_3g011020 28.197 305 177 14 8 296 28 306 4.15e-18 85.1
MS.gene035263.t1 MTR_0064s0160 26.633 398 224 16 8 357 42 419 4.80e-18 85.5
MS.gene035263.t1 MTR_2g425980 27.914 326 179 14 8 295 5 312 5.18e-18 85.1
MS.gene035263.t1 MTR_2g078850 29.333 300 180 11 11 296 33 314 5.64e-18 84.7
MS.gene035263.t1 MTR_1g088120 27.692 325 193 11 6 295 8 325 6.00e-18 85.1
MS.gene035263.t1 MTR_3g006570 26.948 308 184 13 8 296 21 306 7.28e-18 84.3
MS.gene035263.t1 MTR_3g010970 26.421 299 179 10 11 296 51 321 8.32e-18 84.3
MS.gene035263.t1 MTR_3g007300 30.164 305 161 14 8 303 49 310 8.64e-18 84.0
MS.gene035263.t1 MTR_4g070550 27.778 324 177 14 8 291 5 311 8.67e-18 84.3
MS.gene035263.t1 MTR_3g011100 29.508 305 176 14 8 291 235 521 1.11e-17 84.7
MS.gene035263.t1 MTR_1g055375 27.005 374 229 17 11 355 7 365 1.41e-17 83.6
MS.gene035263.t1 MTR_7g069550 24.802 379 222 17 5 335 11 374 1.63e-17 83.6
MS.gene035263.t1 MTR_3g007270 24.419 344 216 8 8 322 47 375 1.66e-17 83.6
MS.gene035263.t1 MTR_3g010870 25.249 301 192 10 8 296 37 316 1.90e-17 83.2
MS.gene035263.t1 MTR_4g013180 26.649 379 216 17 6 337 9 372 1.94e-17 84.0
MS.gene035263.t1 MTR_2g034700 28.280 343 193 17 2 314 8 327 2.13e-17 83.2
MS.gene035263.t1 MTR_6g014720 26.032 315 186 9 7 304 25 309 2.47e-17 82.8
MS.gene035263.t1 MTR_8g099460 26.899 316 184 12 8 295 5 301 2.62e-17 82.8
MS.gene035263.t1 MTR_6g017280 25.895 363 193 20 6 316 7 345 2.69e-17 82.8
MS.gene035263.t1 MTR_6g053240 26.300 327 188 12 8 305 28 330 2.92e-17 82.8
MS.gene035263.t1 MTR_3g024040 27.907 301 183 11 15 305 38 314 3.03e-17 82.4
MS.gene035263.t1 MTR_8g062660 25.714 315 190 9 7 296 21 316 3.04e-17 83.6
MS.gene035263.t1 MTR_2g047878 24.611 386 217 18 4 355 17 362 3.18e-17 82.4
MS.gene035263.t1 MTR_6g090180 26.142 394 215 18 2 338 41 415 3.36e-17 82.8
MS.gene035263.t1 MTR_3g010430 26.948 308 186 11 8 296 36 323 3.57e-17 82.8
MS.gene035263.t1 MTR_4g130330 25.926 378 223 19 1 335 1 364 4.14e-17 82.4
MS.gene035263.t1 MTR_3g030240 25.574 305 176 12 8 296 40 309 4.60e-17 82.0
MS.gene035263.t1 MTR_7g062100 28.462 390 219 20 8 355 24 395 4.85e-17 82.0
MS.gene035263.t1 MTR_4g028510 26.250 400 234 19 8 361 16 400 5.18e-17 82.4
MS.gene035263.t1 MTR_4g055820 26.989 352 203 15 8 314 14 356 8.66e-17 80.9
MS.gene035263.t1 MTR_6g007135 25.515 388 224 15 8 355 26 388 8.82e-17 81.3
MS.gene035263.t1 MTR_5g057643 33.166 199 107 8 8 192 46 232 8.92e-17 79.7
MS.gene035263.t1 MTR_6g048140 26.154 325 179 10 8 301 39 333 9.52e-17 81.3
MS.gene035263.t1 MTR_7g013590 29.739 306 188 13 11 302 39 331 1.06e-16 81.3
MS.gene035263.t1 MTR_6g034720 40.310 129 69 4 145 271 73 195 1.37e-16 78.2
MS.gene035263.t1 MTR_3g009260 30.272 294 169 13 11 291 44 314 1.97e-16 80.1
MS.gene035263.t1 MTR_7g066850 24.802 379 219 18 6 335 21 382 2.21e-16 80.5
MS.gene035263.t1 MTR_7g055977 27.792 385 198 19 6 337 5 362 2.78e-16 79.7
MS.gene035263.t1 MTR_7g066100 27.073 410 221 17 5 358 8 395 2.94e-16 79.7
MS.gene035263.t1 MTR_7g056760 28.616 318 190 14 6 293 21 331 3.06e-16 79.7
MS.gene035263.t1 MTR_4g037465 26.757 370 212 16 7 334 20 372 3.36e-16 79.7
MS.gene035263.t1 MTR_6g048120 25.788 349 203 16 8 322 36 362 3.46e-16 79.7
MS.gene035263.t1 MTR_5g072060 25.691 362 214 17 8 335 6 346 3.90e-16 80.1
MS.gene035263.t1 MTR_2g025960 28.302 265 140 11 103 329 1 253 3.96e-16 78.6
MS.gene035263.t1 MTR_3g464470 24.219 384 214 13 3 334 2 360 4.32e-16 79.3
MS.gene035263.t1 MTR_0242s0060 27.545 334 178 12 6 293 7 322 4.34e-16 79.3
MS.gene035263.t1 MTR_0242s0040 27.545 334 178 12 6 293 7 322 4.34e-16 79.3
MS.gene035263.t1 MTR_4g030760 25.193 389 226 18 5 356 70 430 5.30e-16 79.3
MS.gene035263.t1 MTR_7g061060 27.577 359 188 17 5 316 10 343 6.47e-16 79.0
MS.gene035263.t1 MTR_5g037680 23.929 397 243 16 1 355 1 380 7.71e-16 79.0
MS.gene035263.t1 MTR_4g080200 27.597 308 173 13 6 291 1 280 7.87e-16 78.2
MS.gene035263.t1 MTR_7g028660 27.829 327 178 14 6 295 9 314 8.48e-16 78.2
MS.gene035263.t1 MTR_8g464770 26.371 383 233 21 8 358 12 377 1.01e-15 78.2
MS.gene035263.t1 MTR_3g024150 26.299 308 177 13 11 296 38 317 1.14e-15 77.8
MS.gene035263.t1 MTR_3g058470 26.822 343 176 15 8 321 37 333 1.21e-15 77.8
MS.gene035263.t1 MTR_3g013950 25.250 400 240 16 5 360 4 388 1.23e-15 77.8
MS.gene035263.t1 MTR_0649s0020 24.682 393 234 16 8 355 11 386 1.30e-15 77.8
MS.gene035263.t1 MTR_0267s0050 26.075 372 220 16 5 334 4 362 1.36e-15 77.8
MS.gene035263.t1 MTR_2g437110 26.703 367 217 17 6 335 20 371 1.48e-15 78.2
MS.gene035263.t1 MTR_1g055145 53.333 90 37 4 20 108 45 130 1.80e-15 76.3
MS.gene035263.t1 MTR_1g055145 40.164 122 70 3 209 329 129 248 2.08e-15 76.3
MS.gene035263.t1 MTR_6g017270 31.343 201 114 10 6 188 7 201 2.35e-15 76.6
MS.gene035263.t1 MTR_3g030310 25.962 312 187 17 8 296 21 311 2.63e-15 77.0
MS.gene035263.t1 MTR_5g048160 27.414 321 191 15 8 291 4 319 3.93e-15 76.3
MS.gene035263.t1 MTR_7g052670 25.061 411 241 16 6 355 19 423 3.95e-15 76.6
MS.gene035263.t1 MTR_7g077970 28.399 331 179 15 8 293 7 324 4.10e-15 76.6
MS.gene035263.t1 MTR_7g091630 26.284 331 186 15 4 293 28 341 4.37e-15 76.6
MS.gene035263.t1 MTR_6g016285 24.396 414 233 16 6 355 19 416 4.66e-15 76.6
MS.gene035263.t1 MTR_5g023570 44.545 110 53 4 7 116 36 137 4.69e-15 72.0
MS.gene035263.t1 MTR_3g036335 26.861 309 174 14 8 291 41 322 5.07e-15 76.3
MS.gene035263.t1 MTR_5g043160 26.357 387 209 19 10 332 52 426 5.90e-15 76.3
MS.gene035263.t1 MTR_2g046800 27.829 327 186 15 8 296 14 328 7.33e-15 75.5
MS.gene035263.t1 MTR_3g011120 25.731 342 209 17 2 314 8 333 9.22e-15 75.1
MS.gene035263.t1 MTR_7g056260 28.349 321 178 14 6 293 12 313 9.30e-15 74.7
MS.gene035263.t1 MTR_3g464500 24.468 376 226 14 3 334 22 383 1.17e-14 75.1
MS.gene035263.t1 MTR_4g028660 24.250 400 245 17 2 357 10 395 1.18e-14 75.1
MS.gene035263.t1 MTR_4g027450 24.250 400 245 17 2 357 10 395 1.18e-14 75.1
MS.gene035263.t1 MTR_7g060940 25.185 405 228 16 1 356 15 393 1.18e-14 75.1
MS.gene035263.t1 MTR_5g008530 65.574 61 18 2 5 65 15 72 1.20e-14 68.6
MS.gene035263.t1 MTR_6g055210 27.928 333 167 14 7 290 21 329 1.23e-14 75.1
MS.gene035263.t1 MTR_3g058440 29.752 242 145 10 8 235 35 265 1.26e-14 74.3
MS.gene035263.t1 MTR_7g066010 24.138 377 200 14 4 336 17 351 1.28e-14 74.7
MS.gene035263.t1 MTR_7g091640 27.964 329 179 16 4 293 31 340 1.28e-14 74.7
MS.gene035263.t1 MTR_7g067680 26.861 309 165 15 8 296 49 316 1.37e-14 74.7
MS.gene035263.t1 MTR_1g007410 26.346 353 188 16 8 304 22 358 1.41e-14 74.7
MS.gene035263.t1 MTR_3g058480 33.173 208 107 10 8 190 39 239 1.58e-14 73.9
MS.gene035263.t1 MTR_4g028750 26.536 358 206 16 2 316 10 353 1.78e-14 74.3
MS.gene035263.t1 MTR_0054s0090 23.367 398 247 18 7 357 16 402 1.98e-14 74.3
MS.gene035263.t1 MTR_3g023940 25.243 309 190 11 8 296 34 321 2.58e-14 73.9
MS.gene035263.t1 MTR_5g056020 25.178 421 236 19 2 355 11 419 2.70e-14 74.3
MS.gene035263.t1 MTR_5g069390 25.307 407 238 21 8 363 26 417 2.75e-14 74.3
MS.gene035263.t1 MTR_2g047892 26.444 329 172 14 6 291 20 321 2.83e-14 73.9
MS.gene035263.t1 MTR_7g056200 23.864 352 191 12 6 316 21 336 2.86e-14 73.9
MS.gene035263.t1 MTR_6g004210 25.776 322 205 13 19 310 36 353 3.01e-14 73.9
MS.gene035263.t1 MTR_1g050542 23.906 297 190 11 7 290 57 330 3.09e-14 73.9
MS.gene035263.t1 MTR_2g078870 29.379 177 105 5 123 296 78 237 3.55e-14 72.8
MS.gene035263.t1 MTR_4g013185 25.700 393 220 17 7 335 9 393 4.34e-14 73.6
MS.gene035263.t1 MTR_0831s0010 25.686 401 220 19 3 355 45 415 4.35e-14 73.6
MS.gene035263.t1 MTR_0097s0030 26.216 370 203 16 4 331 10 351 5.36e-14 73.2
MS.gene035263.t1 MTR_2g047240 26.216 370 203 16 4 331 10 351 5.36e-14 73.2
MS.gene035263.t1 MTR_2g031700 26.692 266 151 10 8 251 6 249 6.45e-14 72.0
MS.gene035263.t1 MTR_4g024870 27.897 233 146 9 9 228 45 268 6.76e-14 72.8
MS.gene035263.t1 MTR_1g054575 25.902 305 186 14 8 296 52 332 9.08e-14 72.8
MS.gene035263.t1 MTR_1g071010 24.289 387 248 18 3 355 10 385 1.06e-13 72.0
MS.gene035263.t1 MTR_7g017170 25.916 382 196 19 8 328 18 373 1.08e-13 72.0
MS.gene035263.t1 MTR_7g066030 24.173 393 220 14 1 337 14 384 1.10e-13 72.0
MS.gene035263.t1 MTR_6g042600 37.975 158 65 6 11 160 39 171 1.20e-13 72.0
MS.gene035263.t1 MTR_7g017130 25.916 382 196 19 8 328 18 373 1.50e-13 71.6
MS.gene035263.t1 MTR_7g056570 24.868 378 206 17 7 335 17 365 1.56e-13 71.6
MS.gene035263.t1 MTR_5g057040 31.500 200 109 10 8 192 46 232 1.92e-13 72.4
MS.gene035263.t1 MTR_7g035295 24.566 403 213 16 6 355 14 378 2.33e-13 71.2
MS.gene035263.t1 MTR_7g078040 27.219 338 183 11 8 293 9 335 3.48e-13 70.9
MS.gene035263.t1 MTR_0054s0100 23.500 400 246 19 7 357 16 404 3.65e-13 70.5
MS.gene035263.t1 MTR_7g079640 24.468 376 204 16 8 338 13 353 4.21e-13 70.1
MS.gene035263.t1 MTR_4g028680 24.631 406 243 20 2 361 10 398 4.71e-13 70.1
MS.gene035263.t1 MTR_6g079810 24.533 375 197 20 3 314 65 416 5.74e-13 70.1
MS.gene035263.t1 MTR_5g092850 24.069 403 231 18 7 355 15 396 5.99e-13 70.1
MS.gene035263.t1 MTR_7g061050 30.288 208 109 8 5 192 10 201 6.92e-13 69.7
MS.gene035263.t1 MTR_7g050480 26.627 338 183 11 1 302 15 323 7.15e-13 69.7
MS.gene035263.t1 MTR_2g021950 25.266 376 209 19 11 335 19 373 7.41e-13 69.7
MS.gene035263.t1 MTR_7g078860 26.606 327 196 11 1 293 1 317 8.19e-13 69.3
MS.gene035263.t1 MTR_2g064950 24.289 387 216 15 8 342 10 371 8.24e-13 69.3
MS.gene035263.t1 MTR_4g011660 25.060 419 228 18 5 355 16 416 8.64e-13 69.3
MS.gene035263.t1 MTR_5g027370 22.888 367 223 16 12 345 33 372 1.02e-12 69.3
MS.gene035263.t1 MTR_5g027330 22.888 367 223 16 12 345 44 383 1.10e-12 69.3
MS.gene035263.t1 MTR_1g442850 31.683 202 103 8 7 187 4 191 1.20e-12 68.9
MS.gene035263.t1 MTR_4g013175 26.884 398 215 18 6 337 8 395 1.39e-12 68.9
MS.gene035263.t1 MTR_7g445750 26.761 284 154 12 4 246 19 289 1.41e-12 68.2
MS.gene035263.t1 MTR_7g078840 26.957 345 194 13 1 293 3 341 1.42e-12 68.9
MS.gene035263.t1 MTR_7g050520 25.854 410 217 15 1 357 15 390 1.86e-12 68.2
MS.gene035263.t1 MTR_1g015740 24.638 345 199 13 1 335 1 294 2.12e-12 67.8
MS.gene035263.t1 MTR_3g006640 24.648 284 167 8 107 355 20 291 2.28e-12 67.4
MS.gene035263.t1 MTR_3g010440 34.586 133 79 4 8 136 26 154 2.37e-12 67.8
MS.gene035263.t1 MTR_7g016930 25.472 318 182 16 5 292 13 305 3.76e-12 67.0
MS.gene035263.t1 MTR_7g050490 32.075 212 95 9 1 188 1 187 5.50e-12 64.3
MS.gene035263.t1 MTR_8g063310 25.266 376 206 18 8 330 22 375 6.09e-12 67.0
MS.gene035263.t1 MTR_1g015730 27.385 325 169 16 7 293 8 303 6.48e-12 66.6
MS.gene035263.t1 MTR_7g056710 23.743 358 209 13 3 320 13 346 7.31e-12 66.6
MS.gene035263.t1 MTR_5g096710 27.885 312 189 13 5 291 20 320 7.38e-12 66.6
MS.gene035263.t1 MTR_5g022045 24.773 331 206 13 8 301 35 359 7.66e-12 66.6
MS.gene035263.t1 MTR_7g061090 25.076 327 189 12 6 291 20 331 1.07e-11 66.2
MS.gene035263.t1 MTR_5g046280 27.041 196 115 8 108 291 3 182 1.26e-11 64.7
MS.gene035263.t1 MTR_0627s0010 24.365 394 227 18 8 343 38 418 1.26e-11 65.9
MS.gene035263.t1 MTR_8g063370 26.347 334 188 17 16 314 32 342 1.43e-11 65.5
MS.gene035263.t1 MTR_3g010870 26.866 201 122 6 8 198 37 222 1.52e-11 65.1
MS.gene035263.t1 MTR_0134s0060 24.573 293 165 12 7 250 11 296 2.45e-11 65.1
MS.gene035263.t1 MTR_3g096280 25.333 300 171 11 20 302 17 280 2.55e-11 64.7
MS.gene035263.t1 MTR_3g009300 25.338 296 166 12 11 295 37 288 2.60e-11 64.7
MS.gene035263.t1 MTR_6g017305 25.106 235 129 11 120 316 14 239 2.94e-11 63.9
MS.gene035263.t1 MTR_7g056737 25.455 385 220 17 6 348 20 379 3.04e-11 64.7
MS.gene035263.t1 MTR_3g009250 31.746 189 107 7 11 190 44 219 3.19e-11 63.2
MS.gene035263.t1 MTR_2g010920 23.855 415 238 19 8 355 20 423 3.32e-11 64.7
MS.gene035263.t1 MTR_1g061330 24.742 388 219 19 8 357 4 356 3.66e-11 64.3
MS.gene035263.t1 MTR_7g056797 32.701 211 113 10 5 194 20 222 3.92e-11 64.3
MS.gene035263.t1 MTR_4g006840 34.615 156 89 6 11 161 2 149 4.33e-11 62.8
MS.gene035263.t1 MTR_2g010950 23.291 395 245 15 8 355 20 403 7.15e-11 63.5
MS.gene035263.t1 MTR_4g030790 27.037 270 129 11 2 250 13 235 7.37e-11 63.2
MS.gene035263.t1 MTR_5g010660 24.516 310 176 14 8 291 34 311 8.09e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035263.t1 AT3G23880 31.707 369 215 16 3 349 5 358 2.70e-30 119
MS.gene035263.t1 AT3G06240 28.250 400 224 18 5 355 33 418 1.79e-25 107
MS.gene035263.t1 AT4G22390 25.862 348 217 13 9 333 5 334 9.07e-20 90.1
MS.gene035263.t1 AT4G22390 25.862 348 217 13 9 333 5 334 1.18e-19 89.7
MS.gene035263.t1 AT4G12560 28.617 311 188 15 8 295 4 303 1.39e-19 89.7
MS.gene035263.t1 AT4G12560 28.617 311 188 15 8 295 4 303 1.39e-19 89.7
MS.gene035263.t1 AT4G12560 28.617 311 188 15 8 295 4 303 1.39e-19 89.7
MS.gene035263.t1 AT1G30790 27.302 315 193 12 8 298 9 311 9.65e-17 81.3
MS.gene035263.t1 AT3G07870 25.886 367 215 14 8 329 28 382 1.65e-16 80.9
MS.gene035263.t1 AT1G33530 26.014 296 193 12 3 292 92 367 5.70e-15 76.3
MS.gene035263.t1 AT5G49610 27.119 354 198 15 7 332 8 329 3.87e-14 73.2
MS.gene035263.t1 AT3G52320 25.806 341 215 12 8 337 27 340 7.36e-14 72.8
MS.gene035263.t1 AT1G47790 24.912 285 195 8 8 287 25 295 2.50e-13 70.9
MS.gene035263.t1 AT3G17530 23.103 290 194 9 8 282 6 281 5.38e-13 70.1
MS.gene035263.t1 AT3G10430 29.412 187 115 6 8 187 5 181 1.79e-12 68.2
MS.gene035263.t1 AT2G40910 23.323 313 199 12 8 295 62 358 3.15e-11 64.7
MS.gene035263.t1 AT2G40910 23.323 313 199 11 8 295 69 365 4.76e-11 64.3
MS.gene035263.t1 AT3G20710 24.342 304 202 10 8 300 6 292 5.52e-11 63.9
MS.gene035263.t1 AT3G17540 30.256 195 107 10 8 187 10 190 5.60e-11 63.9
MS.gene035263.t1 AT5G50220 22.508 311 197 9 8 315 33 302 6.84e-11 63.5
MS.gene035263.t1 AT1G11620 25.234 321 195 20 5 304 3 299 8.97e-11 63.2

Find 84 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACTACACATTGTGGTTTA+TGG 0.130917 8.1:+9313372 MS.gene035263:CDS
CAAAATGTGAATTTGCAAAT+TGG 0.153111 8.1:-9312746 None:intergenic
TATTTAGATCTTAGAATTAA+AGG 0.165690 8.1:+9312915 MS.gene035263:CDS
TATAAACATTTCTATGGTTT+TGG 0.167038 8.1:+9313038 MS.gene035263:CDS
AAACTCTGGGTTTGGATTAA+AGG 0.169325 8.1:-9313225 None:intergenic
AATTCATATAAACATTTCTA+TGG 0.273345 8.1:+9313032 MS.gene035263:CDS
GTTGTAACAGATGCTTCTTA+TGG 0.281169 8.1:+9313560 MS.gene035263:CDS
AAAATGTGAATTTGCAAATT+GGG 0.282730 8.1:-9312745 None:intergenic
ATAGAAATGTTTATATGAAT+TGG 0.289524 8.1:-9313030 None:intergenic
ATTCTACGAGTGTGGGTTGC+GGG 0.312270 8.1:-9312777 None:intergenic
GATATGATGCAATTGATATA+TGG 0.320951 8.1:+9313429 MS.gene035263:CDS
GAAGATGCAATTCTATAAAA+AGG 0.321162 8.1:-9313203 None:intergenic
CCACTCTTTGTACAACATAT+AGG 0.329324 8.1:-9313530 None:intergenic
TTGAAGAGAAACTCTGGGTT+TGG 0.338871 8.1:-9313233 None:intergenic
TACTACACATTGTGGTTTAT+GGG 0.339804 8.1:+9313373 MS.gene035263:CDS
AGATGCACTTGTATTTCTAT+TGG 0.343394 8.1:+9313637 MS.gene035263:CDS
CACTCTTTGTACAACATATA+GGG 0.354192 8.1:-9313529 None:intergenic
TGTGGTTTATGGGTATTTAG+AGG 0.378055 8.1:+9313383 MS.gene035263:CDS
TTCTAAGATCTAAATAAGAT+AGG 0.391677 8.1:-9312908 None:intergenic
TTAGAGGATTTCTCAGCCTA+TGG 0.393518 8.1:+9313399 MS.gene035263:CDS
TGCTAGTTGTCACCAGGAAC+AGG 0.400985 8.1:-9313689 None:intergenic
ATGAAGTCGGTGGGACCAAC+AGG 0.407414 8.1:-9313503 None:intergenic
TTGTAACAGATGCTTCTTAT+GGG 0.416344 8.1:+9313561 MS.gene035263:CDS
TTAAATGTGTTTGCAAGTCT+TGG 0.417494 8.1:+9312700 MS.gene035263:CDS
CTCATATCAAATTCACATCT+TGG 0.429715 8.1:+9312804 MS.gene035263:CDS
GATGGCACACCATCTGAGTT+TGG 0.430899 8.1:-9313116 None:intergenic
GTATCATAGTCAACATCAAC+TGG 0.432212 8.1:-9313353 None:intergenic
CAATGATGCTATTCACTGGT+TGG 0.435650 8.1:+9313253 MS.gene035263:CDS
TTGCCTTTCATTTAACAGAA+AGG 0.439356 8.1:+9313309 MS.gene035263:CDS
TCTAAGATCTAAATAAGATA+GGG 0.439443 8.1:-9312907 None:intergenic
AAGACTCTTGTTCTTCCTGT+TGG 0.444148 8.1:+9313488 MS.gene035263:CDS
AAAATGAAGGTTTGGTGAAA+CGG 0.445079 8.1:-9312877 None:intergenic
AACACAAAGGTATTTGTTTG+TGG 0.451941 8.1:-9313007 None:intergenic
CCACTCAACAGATGATTACT+TGG 0.457447 8.1:+9313067 MS.gene035263:CDS
GCATCATTGAAGAGAAACTC+TGG 0.469803 8.1:-9313239 None:intergenic
TACAAGTGCATCTTTACAAA+AGG 0.470897 8.1:-9313627 None:intergenic
AGTACAAAGTGCATTCATCT+TGG 0.470966 8.1:+9313462 MS.gene035263:CDS
TTTCCTTTCTGTTAAATGAA+AGG 0.480038 8.1:-9313312 None:intergenic
TCTTCAATGATGCTATTCAC+TGG 0.487695 8.1:+9313249 MS.gene035263:CDS
AAATGTGAATTTGCAAATTG+GGG 0.492259 8.1:-9312744 None:intergenic
ATATGATGCAATTGATATAT+GGG 0.495926 8.1:+9313430 MS.gene035263:CDS
AATTCTACGAGTGTGGGTTG+CGG 0.497867 8.1:-9312778 None:intergenic
GTGCTTCAAGCCTCTACCTA+TGG 0.501610 8.1:+9312967 MS.gene035263:CDS
CTCAACAGATGATTACTTGG+TGG 0.509364 8.1:+9313070 MS.gene035263:CDS
AGGTATTTGTTTGTGGACTC+CGG 0.509435 8.1:-9313000 None:intergenic
AAACGTATTAGACACTTCAC+TGG 0.512661 8.1:-9312678 None:intergenic
GAATTAAAGGTTCATGTAGA+GGG 0.513006 8.1:+9312928 MS.gene035263:CDS
TGATAGTTCAAATTCTTCAA+AGG 0.527829 8.1:+9312652 MS.gene035263:CDS
TAGAGGATTTCTCAGCCTAT+GGG 0.528108 8.1:+9313400 MS.gene035263:CDS
CCTATATGTTGTACAAAGAG+TGG 0.539284 8.1:+9313530 MS.gene035263:CDS
AGAATTAAAGGTTCATGTAG+AGG 0.542009 8.1:+9312927 MS.gene035263:CDS
CTAAGATCTAAATAAGATAG+GGG 0.555242 8.1:-9312906 None:intergenic
AAGCAGAGACTCTGTATACA+TGG 0.557254 8.1:-9313660 None:intergenic
AACAGGAAGAACAAGAGTCT+TGG 0.557885 8.1:-9313486 None:intergenic
TGTTTGTGGACTCCGGTGGA+TGG 0.562979 8.1:-9312993 None:intergenic
TGCAATTGATATATGGGTGA+TGG 0.565148 8.1:+9313436 MS.gene035263:CDS
ATTGAGAGCTAATGCATGGA+AGG 0.571771 8.1:+9313157 MS.gene035263:CDS
TAGTCAACATCAACTGGGAG+AGG 0.571901 8.1:-9313347 None:intergenic
AACAGATGCTTCTTATGGGT+TGG 0.573037 8.1:+9313565 MS.gene035263:CDS
TTCTACGAGTGTGGGTTGCG+GGG 0.574394 8.1:-9312776 None:intergenic
TAACCTTGCTAGTTGTCACC+AGG 0.578340 8.1:-9313695 None:intergenic
GAGAAAAGCCACAAGTGAGA+TGG 0.578737 8.1:-9313134 None:intergenic
TGGATGGATTCCATAGGTAG+AGG 0.580952 8.1:-9312977 None:intergenic
CATCATTGAAGAGAAACTCT+GGG 0.584497 8.1:-9313238 None:intergenic
GATCGAATTCCAAACTCAGA+TGG 0.589855 8.1:+9313107 MS.gene035263:CDS
CATCATATCTCAAAACCCAT+AGG 0.591480 8.1:-9313415 None:intergenic
TCTCATTGAGAGCTAATGCA+TGG 0.591835 8.1:+9313153 MS.gene035263:CDS
TACCTATGGAATCCATCCAC+CGG 0.594761 8.1:+9312981 MS.gene035263:CDS
TGAGTGCAATTCTACGAGTG+TGG 0.605167 8.1:-9312785 None:intergenic
TATAGGGAAAATGAAGTCGG+TGG 0.606620 8.1:-9313513 None:intergenic
AAAGGCAAATGGGTAGTACT+CGG 0.610760 8.1:-9313185 None:intergenic
GACTATGATACTACACATTG+TGG 0.613425 8.1:+9313365 MS.gene035263:CDS
ATTTGAACTATCAATTCATG+AGG 0.614523 8.1:-9312642 None:intergenic
TATTTGTTTGTGGACTCCGG+TGG 0.623523 8.1:-9312997 None:intergenic
GCTAGTTGTCACCAGGAACA+GGG 0.629378 8.1:-9313688 None:intergenic
ACATATAGGGAAAATGAAGT+CGG 0.629686 8.1:-9313516 None:intergenic
TTGGTGAAATATAACAACAA+AGG 0.638031 8.1:+9313584 MS.gene035263:CDS
ATGGTGTGCCATCTCACTTG+TGG 0.642050 8.1:+9313126 MS.gene035263:CDS
CTCCGGTGGATGGATTCCAT+AGG 0.643424 8.1:-9312983 None:intergenic
ATAGGGAAAATGAAGTCGGT+GGG 0.645319 8.1:-9313512 None:intergenic
CCAAGTAATCATCTGTTGAG+TGG 0.662857 8.1:-9313067 None:intergenic
GAGTGCAATTCTACGAGTGT+GGG 0.664592 8.1:-9312784 None:intergenic
TTATATGAATTGGAACACAA+AGG 0.673687 8.1:-9313020 None:intergenic
TATCATAGTCAACATCAACT+GGG 0.686130 8.1:-9313352 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCATATAAACATTTCTA+TGG + chr8.1:9313032-9313051 MS.gene035263:CDS 15.0%
!! ATAGAAATGTTTATATGAAT+TGG - chr8.1:9313033-9313052 None:intergenic 15.0%
!! TATTTAGATCTTAGAATTAA+AGG + chr8.1:9312915-9312934 MS.gene035263:CDS 15.0%
!! AAAATGTGAATTTGCAAATT+GGG - chr8.1:9312748-9312767 None:intergenic 20.0%
!! AATTCTATAAAAAGGCAAAT+GGG - chr8.1:9313198-9313217 None:intergenic 20.0%
!! ATATGATGCAATTGATATAT+GGG + chr8.1:9313430-9313449 MS.gene035263:CDS 20.0%
!!! ATAAACATTTCTATGGTTTT+GGG + chr8.1:9313039-9313058 MS.gene035263:CDS 20.0%
!!! TATAAACATTTCTATGGTTT+TGG + chr8.1:9313038-9313057 MS.gene035263:CDS 20.0%
!!! TCTAAGATCTAAATAAGATA+GGG - chr8.1:9312910-9312929 None:intergenic 20.0%
!!! TTCTAAGATCTAAATAAGAT+AGG - chr8.1:9312911-9312930 None:intergenic 20.0%
! AAATGTGAATTTGCAAATTG+GGG - chr8.1:9312747-9312766 None:intergenic 25.0%
! ATTTGAACTATCAATTCATG+AGG - chr8.1:9312645-9312664 None:intergenic 25.0%
! CAAAATGTGAATTTGCAAAT+TGG - chr8.1:9312749-9312768 None:intergenic 25.0%
! CAATTCTATAAAAAGGCAAA+TGG - chr8.1:9313199-9313218 None:intergenic 25.0%
! CTAAGATCTAAATAAGATAG+GGG - chr8.1:9312909-9312928 None:intergenic 25.0%
! GAAGATGCAATTCTATAAAA+AGG - chr8.1:9313206-9313225 None:intergenic 25.0%
! GATATGATGCAATTGATATA+TGG + chr8.1:9313429-9313448 MS.gene035263:CDS 25.0%
! TGATAGTTCAAATTCTTCAA+AGG + chr8.1:9312652-9312671 MS.gene035263:CDS 25.0%
! TTATATGAATTGGAACACAA+AGG - chr8.1:9313023-9313042 None:intergenic 25.0%
! TTGGTGAAATATAACAACAA+AGG + chr8.1:9313584-9313603 MS.gene035263:CDS 25.0%
! TTTCCTTTCTGTTAAATGAA+AGG - chr8.1:9313315-9313334 None:intergenic 25.0%
ACATATAGGGAAAATGAAGT+CGG - chr8.1:9313519-9313538 None:intergenic 30.0%
AGAATTAAAGGTTCATGTAG+AGG + chr8.1:9312927-9312946 MS.gene035263:CDS 30.0%
ATACTACACATTGTGGTTTA+TGG + chr8.1:9313372-9313391 MS.gene035263:CDS 30.0%
CACTCTTTGTACAACATATA+GGG - chr8.1:9313532-9313551 None:intergenic 30.0%
CTCATATCAAATTCACATCT+TGG + chr8.1:9312804-9312823 MS.gene035263:CDS 30.0%
GAATTAAAGGTTCATGTAGA+GGG + chr8.1:9312928-9312947 MS.gene035263:CDS 30.0%
TACAAGTGCATCTTTACAAA+AGG - chr8.1:9313630-9313649 None:intergenic 30.0%
TACTACACATTGTGGTTTAT+GGG + chr8.1:9313373-9313392 MS.gene035263:CDS 30.0%
TATCATAGTCAACATCAACT+GGG - chr8.1:9313355-9313374 None:intergenic 30.0%
TTAAATGTGTTTGCAAGTCT+TGG + chr8.1:9312700-9312719 MS.gene035263:CDS 30.0%
TTGCCTTTCATTTAACAGAA+AGG + chr8.1:9313309-9313328 MS.gene035263:CDS 30.0%
TTGTAACAGATGCTTCTTAT+GGG + chr8.1:9313561-9313580 MS.gene035263:CDS 30.0%
! AGATGCACTTGTATTTCTAT+TGG + chr8.1:9313637-9313656 MS.gene035263:CDS 30.0%
!! AAAATGAAGGTTTGGTGAAA+CGG - chr8.1:9312880-9312899 None:intergenic 30.0%
!! AACACAAAGGTATTTGTTTG+TGG - chr8.1:9313010-9313029 None:intergenic 30.0%
AAACGTATTAGACACTTCAC+TGG - chr8.1:9312681-9312700 None:intergenic 35.0%
AAACTCTGGGTTTGGATTAA+AGG - chr8.1:9313228-9313247 None:intergenic 35.0%
AGTACAAAGTGCATTCATCT+TGG + chr8.1:9313462-9313481 MS.gene035263:CDS 35.0%
ATAGGGGACTCAAAAAATGA+AGG - chr8.1:9312893-9312912 None:intergenic 35.0%
CATCATATCTCAAAACCCAT+AGG - chr8.1:9313418-9313437 None:intergenic 35.0%
CATCATTGAAGAGAAACTCT+GGG - chr8.1:9313241-9313260 None:intergenic 35.0%
CCACTCTTTGTACAACATAT+AGG - chr8.1:9313533-9313552 None:intergenic 35.0%
CCTATATGTTGTACAAAGAG+TGG + chr8.1:9313530-9313549 MS.gene035263:CDS 35.0%
GACTATGATACTACACATTG+TGG + chr8.1:9313365-9313384 MS.gene035263:CDS 35.0%
GGACTCAAAAAATGAAGGTT+TGG - chr8.1:9312888-9312907 None:intergenic 35.0%
GTATCATAGTCAACATCAAC+TGG - chr8.1:9313356-9313375 None:intergenic 35.0%
GTTGTAACAGATGCTTCTTA+TGG + chr8.1:9313560-9313579 MS.gene035263:CDS 35.0%
TCTTCAATGATGCTATTCAC+TGG + chr8.1:9313249-9313268 MS.gene035263:CDS 35.0%
TGCAATTGATATATGGGTGA+TGG + chr8.1:9313436-9313455 MS.gene035263:CDS 35.0%
TGTGGTTTATGGGTATTTAG+AGG + chr8.1:9313383-9313402 MS.gene035263:CDS 35.0%
AAAGGCAAATGGGTAGTACT+CGG - chr8.1:9313188-9313207 None:intergenic 40.0%
AACAGATGCTTCTTATGGGT+TGG + chr8.1:9313565-9313584 MS.gene035263:CDS 40.0%
AACAGGAAGAACAAGAGTCT+TGG - chr8.1:9313489-9313508 None:intergenic 40.0%
AAGACTCTTGTTCTTCCTGT+TGG + chr8.1:9313488-9313507 MS.gene035263:CDS 40.0%
AAGCAGAGACTCTGTATACA+TGG - chr8.1:9313663-9313682 None:intergenic 40.0%
AGGTATTTGTTTGTGGACTC+CGG - chr8.1:9313003-9313022 None:intergenic 40.0%
ATAGGGAAAATGAAGTCGGT+GGG - chr8.1:9313515-9313534 None:intergenic 40.0%
ATTGAGAGCTAATGCATGGA+AGG + chr8.1:9313157-9313176 MS.gene035263:CDS 40.0%
CAATGATGCTATTCACTGGT+TGG + chr8.1:9313253-9313272 MS.gene035263:CDS 40.0%
CCAAGTAATCATCTGTTGAG+TGG - chr8.1:9313070-9313089 None:intergenic 40.0%
CCACTCAACAGATGATTACT+TGG + chr8.1:9313067-9313086 MS.gene035263:CDS 40.0%
CTCAACAGATGATTACTTGG+TGG + chr8.1:9313070-9313089 MS.gene035263:CDS 40.0%
GATCGAATTCCAAACTCAGA+TGG + chr8.1:9313107-9313126 MS.gene035263:CDS 40.0%
GCATCATTGAAGAGAAACTC+TGG - chr8.1:9313242-9313261 None:intergenic 40.0%
TAGAGGATTTCTCAGCCTAT+GGG + chr8.1:9313400-9313419 MS.gene035263:CDS 40.0%
TATAGGGAAAATGAAGTCGG+TGG - chr8.1:9313516-9313535 None:intergenic 40.0%
TCTCATTGAGAGCTAATGCA+TGG + chr8.1:9313153-9313172 MS.gene035263:CDS 40.0%
TTAGAGGATTTCTCAGCCTA+TGG + chr8.1:9313399-9313418 MS.gene035263:CDS 40.0%
TTGAAGAGAAACTCTGGGTT+TGG - chr8.1:9313236-9313255 None:intergenic 40.0%
GAGAAAAGCCACAAGTGAGA+TGG - chr8.1:9313137-9313156 None:intergenic 45.0%
GAGTGCAATTCTACGAGTGT+GGG - chr8.1:9312787-9312806 None:intergenic 45.0%
TACCTATGGAATCCATCCAC+CGG + chr8.1:9312981-9313000 MS.gene035263:CDS 45.0%
TAGTCAACATCAACTGGGAG+AGG - chr8.1:9313350-9313369 None:intergenic 45.0%
TATTTGTTTGTGGACTCCGG+TGG - chr8.1:9313000-9313019 None:intergenic 45.0%
TGAGTGCAATTCTACGAGTG+TGG - chr8.1:9312788-9312807 None:intergenic 45.0%
! AATTCTACGAGTGTGGGTTG+CGG - chr8.1:9312781-9312800 None:intergenic 45.0%
! TGGATGGATTCCATAGGTAG+AGG - chr8.1:9312980-9312999 None:intergenic 45.0%
ATGGTGTGCCATCTCACTTG+TGG + chr8.1:9313126-9313145 MS.gene035263:CDS 50.0%
GATGGCACACCATCTGAGTT+TGG - chr8.1:9313119-9313138 None:intergenic 50.0%
GTGCTTCAAGCCTCTACCTA+TGG + chr8.1:9312967-9312986 MS.gene035263:CDS 50.0%
! ATTCTACGAGTGTGGGTTGC+GGG - chr8.1:9312780-9312799 None:intergenic 50.0%
!! CTGCTTTTACTCCCTGTTCC+TGG + chr8.1:9313677-9313696 MS.gene035263:CDS 50.0%
!!! CACTGGTTGGCTTTTCGTCA+CGG + chr8.1:9313266-9313285 MS.gene035263:CDS 50.0%
!!! GTTGGCTTTTCGTCACGGTA+TGG + chr8.1:9313271-9313290 MS.gene035263:CDS 50.0%
ATGAAGTCGGTGGGACCAAC+AGG - chr8.1:9313506-9313525 None:intergenic 55.0%
TGTTTGTGGACTCCGGTGGA+TGG - chr8.1:9312996-9313015 None:intergenic 55.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr8.1:9312986-9313005 None:intergenic 55.0%
! TTCTACGAGTGTGGGTTGCG+GGG - chr8.1:9312779-9312798 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 9312618 9313709 9312618 ID=MS.gene035263
chr8.1 mRNA 9312618 9313709 9312618 ID=MS.gene035263.t1;Parent=MS.gene035263
chr8.1 exon 9312618 9313709 9312618 ID=MS.gene035263.t1.exon1;Parent=MS.gene035263.t1
chr8.1 CDS 9312618 9313709 9312618 ID=cds.MS.gene035263.t1;Parent=MS.gene035263.t1
Gene Sequence

>MS.gene035263

ATGGAGACGAATTCAATGTTTCTTCCTCATGAATTGATAGTTCAAATTCTTCAAAGGTTACCAGTGAAGTGTCTAATACGTTTTAAATGTGTTTGCAAGTCTTGGTTTTCTCTTATTTCTCATGATCCCCAATTTGCAAATTCACATTTTGAAATTAACCCCGCAACCCACACTCGTAGAATTGCACTCATATCAAATTCACATCTTGGAACTCGATCTTTCAACATAGAAGCATCACTTAACGATGATTCTGCTGTTTCCGTTTCACCAAACCTTCATTTTTTGAGTCCCCTATCTTATTTAGATCTTAGAATTAAAGGTTCATGTAGAGGGTTTATATTGTTGCATTGTGCTTCAAGCCTCTACCTATGGAATCCATCCACCGGAGTCCACAAACAAATACCTTTGTGTTCCAATTCATATAAACATTTCTATGGTTTTGGGTATGACCACTCAACAGATGATTACTTGGTGGTTTCATTGTGCAATGATCGAATTCCAAACTCAGATGGTGTGCCATCTCACTTGTGGCTTTTCTCATTGAGAGCTAATGCATGGAAGGAATTTCCGAGTACTACCCATTTGCCTTTTTATAGAATTGCATCTTCCTTTAATCCAAACCCAGAGTTTCTCTTCAATGATGCTATTCACTGGTTGGCTTTTCGTCACGGTATGGATGTCTATGTTATTGTTGCCTTTCATTTAACAGAAAGGAAACTTATAGAGATTCCTCTCCCAGTTGATGTTGACTATGATACTACACATTGTGGTTTATGGGTATTTAGAGGATTTCTCAGCCTATGGGTTTTGAGATATGATGCAATTGATATATGGGTGATGGAAGAGTACAAAGTGCATTCATCTTGGACCAAGACTCTTGTTCTTCCTGTTGGTCCCACCGACTTCATTTTCCCTATATGTTGTACAAAGAGTGGTGATATTGTTGTAACAGATGCTTCTTATGGGTTGGTGAAATATAACAACAAAGGAGAGCTTCTAGAGCGTAACTCCTTTTGTAAAGATGCACTTGTATTTCTATTGGCCATGTATACAGAGTCTCTGCTTTTACTCCCTGTTCCTGGTGACAACTAG

Protein sequence

>MS.gene035263.t1

METNSMFLPHELIVQILQRLPVKCLIRFKCVCKSWFSLISHDPQFANSHFEINPATHTRRIALISNSHLGTRSFNIEASLNDDSAVSVSPNLHFLSPLSYLDLRIKGSCRGFILLHCASSLYLWNPSTGVHKQIPLCSNSYKHFYGFGYDHSTDDYLVVSLCNDRIPNSDGVPSHLWLFSLRANAWKEFPSTTHLPFYRIASSFNPNPEFLFNDAIHWLAFRHGMDVYVIVAFHLTERKLIEIPLPVDVDYDTTHCGLWVFRGFLSLWVLRYDAIDIWVMEEYKVHSSWTKTLVLPVGPTDFIFPICCTKSGDIVVTDASYGLVKYNNKGELLERNSFCKDALVFLLAMYTESLLLLPVPGDN