AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87559


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87559.t1 MTR_4g023120 85.484 372 52 1 1 372 1 370 0.0 657
MS.gene87559.t1 MTR_4g023070 85.405 370 52 1 1 370 1 368 0.0 651
MS.gene87559.t1 MTR_4g023090 65.079 378 117 5 3 372 16 386 8.26e-170 479
MS.gene87559.t1 MTR_4g023080 66.667 369 97 4 3 370 9 352 2.54e-168 474
MS.gene87559.t1 MTR_4g021785 64.865 370 103 4 3 370 9 353 2.07e-166 469
MS.gene87559.t1 MTR_4g023380 60.804 398 94 6 3 372 16 379 1.19e-151 432
MS.gene87559.t1 MTR_4g023130 58.808 369 85 5 3 370 9 311 1.28e-138 397
MS.gene87559.t1 MTR_4g023200 59.104 357 121 5 17 370 24 358 3.95e-138 397
MS.gene87559.t1 MTR_4g023150 59.030 371 127 5 3 370 10 358 1.82e-137 396
MS.gene87559.t1 MTR_4g023190 58.760 371 127 6 3 370 10 357 1.31e-133 386
MS.gene87559.t1 MTR_4g023440 55.914 372 105 5 3 372 18 332 2.26e-126 367
MS.gene87559.t1 MTR_3g103020 55.172 377 140 10 3 370 20 376 5.63e-126 367
MS.gene87559.t1 MTR_4g109280 52.674 374 147 9 3 370 8 357 1.65e-115 340
MS.gene87559.t1 MTR_4g094365 51.451 379 153 8 3 372 8 364 2.09e-114 337
MS.gene87559.t1 MTR_3g034180 51.042 384 157 11 3 372 123 489 1.65e-112 337
MS.gene87559.t1 MTR_4g109270 52.480 383 143 10 1 370 6 362 2.17e-112 332
MS.gene87559.t1 MTR_4g116330 50.919 381 147 11 3 369 23 377 1.01e-111 331
MS.gene87559.t1 MTR_3g034130 52.473 364 141 10 3 352 9 354 1.72e-111 330
MS.gene87559.t1 MTR_3g034160 50.526 380 159 9 3 369 9 372 8.80e-109 323
MS.gene87559.t1 MTR_4g117850 51.058 378 150 12 3 369 23 376 3.90e-107 319
MS.gene87559.t1 MTR_4g122850 52.139 374 143 14 14 372 12 364 3.89e-106 317
MS.gene87559.t1 MTR_4g117780 48.953 382 160 10 2 372 10 367 6.47e-104 311
MS.gene87559.t1 MTR_8g433040 49.086 383 146 10 3 372 18 364 1.14e-103 310
MS.gene87559.t1 MTR_8g032380 49.086 383 146 10 3 372 18 364 1.14e-103 310
MS.gene87559.t1 MTR_4g117770 49.344 381 158 9 3 372 11 367 1.72e-103 310
MS.gene87559.t1 MTR_4g117810 49.344 381 158 9 3 372 11 367 1.72e-103 310
MS.gene87559.t1 MTR_6g060650 49.741 386 154 12 3 370 8 371 5.96e-102 306
MS.gene87559.t1 MTR_1g055135 48.168 382 163 11 3 370 13 373 2.39e-101 305
MS.gene87559.t1 MTR_8g032390 48.000 375 141 11 3 367 40 370 5.67e-96 291
MS.gene87559.t1 MTR_5g097210 47.733 375 165 11 3 369 9 360 2.37e-95 289
MS.gene87559.t1 MTR_4g118380 47.978 371 146 10 3 347 8 357 2.03e-92 281
MS.gene87559.t1 MTR_4g117720 46.214 383 136 12 1 369 49 375 3.34e-92 281
MS.gene87559.t1 MTR_5g070088 43.182 396 178 8 3 370 7 383 1.23e-91 280
MS.gene87559.t1 MTR_5g070130 45.812 382 174 9 3 369 11 374 9.78e-91 278
MS.gene87559.t1 MTR_5g070080 45.088 397 164 12 3 369 10 382 2.17e-89 274
MS.gene87559.t1 MTR_4g116330 45.669 381 128 11 3 369 23 338 2.17e-89 273
MS.gene87559.t1 MTR_8g433030 45.283 371 124 10 3 367 40 337 2.08e-86 265
MS.gene87559.t1 MTR_4g121580 45.989 374 141 13 3 361 11 338 6.51e-83 258
MS.gene87559.t1 MTR_4g117750 46.859 382 162 12 1 368 1 355 2.00e-81 257
MS.gene87559.t1 MTR_4g117750 52.066 121 44 2 252 370 373 481 5.72e-27 112
MS.gene87559.t1 MTR_8g013010 50.185 271 112 8 1 261 52 309 2.16e-78 244
MS.gene87559.t1 MTR_1g055165 42.246 374 143 10 3 370 10 316 4.21e-78 243
MS.gene87559.t1 MTR_4g117870 46.624 311 108 10 67 372 10 267 6.28e-75 233
MS.gene87559.t1 MTR_1g055195 43.390 295 124 8 87 369 212 475 1.24e-62 208
MS.gene87559.t1 MTR_4g116320 51.515 231 89 5 144 369 43 255 4.29e-62 200
MS.gene87559.t1 MTR_6g463430 51.869 214 82 4 163 372 6 202 5.73e-60 192
MS.gene87559.t1 MTR_4g118400 41.577 279 113 7 91 365 61 293 6.00e-58 190
MS.gene87559.t1 MTR_7g079370 38.701 354 177 12 32 365 16 349 1.01e-56 189
MS.gene87559.t1 MTR_2g048580 35.065 385 171 16 3 365 8 335 2.49e-55 185
MS.gene87559.t1 MTR_8g040935 49.763 211 85 5 168 370 9 206 8.56e-54 177
MS.gene87559.t1 MTR_4g116340 45.957 235 93 7 3 226 36 247 2.44e-52 174
MS.gene87559.t1 MTR_4g118370 41.667 264 108 10 113 369 33 257 1.09e-49 168
MS.gene87559.t1 MTR_7g079400 38.926 298 146 10 87 370 60 335 7.27e-49 168
MS.gene87559.t1 MTR_8g102520 34.127 378 174 15 3 370 8 320 1.32e-45 159
MS.gene87559.t1 MTR_1g055175 43.269 208 93 7 172 370 8 199 1.75e-40 142
MS.gene87559.t1 MTR_7g117720 47.030 202 73 6 3 195 10 186 3.40e-40 143
MS.gene87559.t1 MTR_7g117720 48.148 108 38 3 264 365 175 270 3.02e-20 89.7
MS.gene87559.t1 MTR_1g055250 38.934 244 115 9 134 366 44 264 4.08e-39 142
MS.gene87559.t1 MTR_4g114700 39.416 274 89 8 101 362 9 217 4.14e-39 139
MS.gene87559.t1 MTR_4g117530 39.914 233 84 6 139 370 74 251 9.40e-39 139
MS.gene87559.t1 MTR_4g117430 51.316 152 57 6 112 260 14 151 2.01e-36 130
MS.gene87559.t1 MTR_1g094210 30.214 374 217 15 3 364 57 398 9.73e-36 135
MS.gene87559.t1 MTR_1g094210 30.312 353 203 14 3 344 57 377 1.45e-35 134
MS.gene87559.t1 MTR_1g097490 31.099 373 215 14 3 364 49 390 7.52e-35 132
MS.gene87559.t1 MTR_2g046920 32.738 336 187 15 3 318 24 340 3.19e-34 130
MS.gene87559.t1 MTR_1g097330 30.721 319 194 10 3 310 16 318 2.17e-32 126
MS.gene87559.t1 MTR_5g022420 30.864 324 183 15 3 310 27 325 1.62e-31 123
MS.gene87559.t1 MTR_2g021150 30.383 339 196 16 3 325 14 328 1.69e-31 122
MS.gene87559.t1 MTR_4g107820 27.368 380 230 13 2 364 35 385 2.04e-31 122
MS.gene87559.t1 MTR_4g107780 27.368 380 230 13 2 364 35 385 2.04e-31 122
MS.gene87559.t1 MTR_1g097560 28.418 373 221 15 3 364 36 373 2.79e-31 122
MS.gene87559.t1 MTR_4g107780 27.368 380 230 13 2 364 35 385 4.22e-31 122
MS.gene87559.t1 MTR_4g107820 27.368 380 230 13 2 364 35 385 4.62e-31 122
MS.gene87559.t1 MTR_8g101580 28.421 380 226 14 2 364 44 394 9.05e-31 121
MS.gene87559.t1 MTR_2g055970 28.010 382 223 14 3 364 211 560 9.45e-31 123
MS.gene87559.t1 MTR_4g023430 69.512 82 25 0 3 84 41 122 4.36e-30 115
MS.gene87559.t1 MTR_4g023430 47.727 132 37 4 249 372 115 222 1.39e-26 105
MS.gene87559.t1 MTR_2g047832 30.226 354 194 16 3 325 29 360 5.11e-30 119
MS.gene87559.t1 MTR_8g467140 31.148 305 181 12 3 294 32 320 7.98e-30 117
MS.gene87559.t1 MTR_2g046830 31.804 327 186 15 3 310 25 333 4.67e-29 116
MS.gene87559.t1 MTR_3g009310 29.255 376 225 13 3 364 42 390 1.02e-28 115
MS.gene87559.t1 MTR_4g108820 30.405 296 152 11 3 292 42 289 7.15e-28 111
MS.gene87559.t1 MTR_7g079420 32.639 288 128 13 100 370 905 1143 1.23e-27 115
MS.gene87559.t1 MTR_4g133170 27.829 327 201 12 2 311 3 311 4.79e-27 110
MS.gene87559.t1 MTR_5g057690 32.063 315 166 15 3 301 46 328 8.02e-27 110
MS.gene87559.t1 MTR_2g046900 29.032 341 203 15 3 325 28 347 9.07e-27 110
MS.gene87559.t1 MTR_5g057790 33.121 314 174 15 3 301 46 338 9.59e-27 110
MS.gene87559.t1 MTR_3g036290 32.441 299 157 14 3 287 22 289 9.70e-27 109
MS.gene87559.t1 MTR_5g023000 53.704 108 36 2 265 370 2 97 1.83e-26 102
MS.gene87559.t1 MTR_3g007360 30.909 385 205 20 6 365 55 403 6.06e-26 108
MS.gene87559.t1 MTR_4g122860 37.129 202 80 8 179 372 158 320 6.68e-26 107
MS.gene87559.t1 MTR_4g118360 50.400 125 42 4 249 369 15 123 1.38e-25 100
MS.gene87559.t1 MTR_3g007430 30.976 297 172 13 6 287 46 324 2.67e-25 105
MS.gene87559.t1 MTR_6g021880 27.688 372 227 12 14 364 31 381 3.17e-25 105
MS.gene87559.t1 MTR_4g013180 29.201 363 190 14 4 325 12 348 3.84e-25 106
MS.gene87559.t1 MTR_4g061340 29.967 307 172 14 3 287 26 311 3.97e-25 105
MS.gene87559.t1 MTR_3g014540 29.820 389 212 19 3 367 29 380 5.95e-25 105
MS.gene87559.t1 MTR_7g057270 27.596 366 201 15 3 325 26 370 8.28e-25 105
MS.gene87559.t1 MTR_4g055060 29.429 350 197 15 3 330 30 351 9.87e-25 104
MS.gene87559.t1 MTR_3g014570 27.865 384 227 13 3 367 29 381 1.03e-24 104
MS.gene87559.t1 MTR_1g050542 25.201 373 242 15 3 364 58 404 1.10e-24 104
MS.gene87559.t1 MTR_3g013770 28.646 384 229 14 3 367 33 390 1.20e-24 104
MS.gene87559.t1 MTR_2g028130 28.198 344 201 13 2 310 4 336 1.33e-24 104
MS.gene87559.t1 MTR_5g057710 31.962 316 173 17 3 300 46 337 1.39e-24 103
MS.gene87559.t1 MTR_3g007410 30.649 385 206 20 6 365 55 403 2.20e-24 103
MS.gene87559.t1 MTR_1g054575 28.267 329 206 16 3 318 52 363 2.45e-24 105
MS.gene87559.t1 MTR_0044s0300 26.772 381 231 13 3 364 38 389 4.06e-24 102
MS.gene87559.t1 MTR_3g013740 29.639 388 222 18 3 364 44 406 6.01e-24 102
MS.gene87559.t1 MTR_2g021155 29.619 341 209 16 6 337 39 357 6.34e-24 103
MS.gene87559.t1 MTR_2g021155 27.941 204 124 9 114 305 711 903 1.59e-11 66.2
MS.gene87559.t1 MTR_6g027910 27.273 385 232 14 6 364 12 374 9.56e-24 101
MS.gene87559.t1 MTR_2g021050 26.440 382 222 14 2 368 4 341 1.05e-23 101
MS.gene87559.t1 MTR_3g036430 26.933 375 209 13 3 364 20 342 1.25e-23 100
MS.gene87559.t1 MTR_5g057020 32.476 311 165 16 3 301 46 323 2.78e-23 99.8
MS.gene87559.t1 MTR_2g426090 28.228 333 193 11 6 306 9 327 3.61e-23 100
MS.gene87559.t1 MTR_7g062100 28.676 408 214 16 3 366 24 398 5.70e-23 99.4
MS.gene87559.t1 MTR_5g069120 40.127 157 83 3 13 159 1 156 6.71e-23 94.7
MS.gene87559.t1 MTR_4g109290 43.137 153 57 5 3 153 9 133 7.66e-23 94.7
MS.gene87559.t1 MTR_4g109290 66.667 51 15 1 322 370 136 186 3.06e-11 62.4
MS.gene87559.t1 MTR_4g030830 27.095 358 209 12 3 325 9 349 8.63e-23 99.0
MS.gene87559.t1 MTR_8g098830 37.079 178 87 8 173 343 35 194 8.72e-23 95.9
MS.gene87559.t1 MTR_7g070830 27.434 339 192 8 3 294 21 352 9.48e-23 99.4
MS.gene87559.t1 MTR_3g007330 28.969 359 197 18 3 339 48 370 1.09e-22 98.6
MS.gene87559.t1 MTR_3g023930 27.467 375 218 14 3 364 34 367 1.25e-22 98.2
MS.gene87559.t1 MTR_7g445890 26.368 402 225 14 3 366 16 384 1.71e-22 97.8
MS.gene87559.t1 MTR_6g065980 27.273 374 229 15 3 364 16 358 2.03e-22 97.4
MS.gene87559.t1 MTR_1g088120 26.923 364 207 11 6 327 13 359 2.53e-22 97.8
MS.gene87559.t1 MTR_2g461450 29.831 295 176 11 3 287 18 291 5.28e-22 96.3
MS.gene87559.t1 MTR_2g021190 28.877 374 232 16 3 364 21 372 7.84e-22 95.9
MS.gene87559.t1 MTR_5g008530 73.333 60 14 1 1 60 16 73 8.11e-22 88.6
MS.gene87559.t1 MTR_2g028160 27.536 345 204 14 2 310 4 338 8.30e-22 96.3
MS.gene87559.t1 MTR_3g010430 26.768 396 217 16 3 364 36 392 9.27e-22 96.3
MS.gene87559.t1 MTR_7g070440 28.481 316 178 12 5 291 9 305 9.88e-22 95.5
MS.gene87559.t1 MTR_2g028140 28.704 324 183 14 2 287 4 317 1.16e-21 95.9
MS.gene87559.t1 MTR_2g426070 28.319 339 200 12 4 310 7 334 1.33e-21 95.5
MS.gene87559.t1 MTR_2g426020 25.065 387 247 13 3 363 6 375 1.49e-21 95.5
MS.gene87559.t1 MTR_6g034720 49.505 101 47 2 138 237 72 169 1.65e-21 92.0
MS.gene87559.t1 MTR_0115s0020 25.313 399 255 16 2 367 9 397 1.77e-21 95.1
MS.gene87559.t1 MTR_7g070880 26.542 373 206 11 3 325 21 375 2.07e-21 95.1
MS.gene87559.t1 MTR_2g104340 25.182 413 233 14 3 369 14 396 2.12e-21 95.1
MS.gene87559.t1 MTR_3g072470 27.649 387 210 17 3 345 19 379 2.52e-21 95.1
MS.gene87559.t1 MTR_2g078900 28.479 309 175 16 3 292 33 314 2.71e-21 94.4
MS.gene87559.t1 MTR_3g083010 26.980 404 229 17 3 367 6 382 2.81e-21 94.7
MS.gene87559.t1 MTR_5g011200 27.036 307 190 12 3 292 17 306 3.41e-21 94.4
MS.gene87559.t1 MTR_1g068875 28.829 333 189 13 2 310 3 311 3.69e-21 94.0
MS.gene87559.t1 MTR_3g010520 24.934 381 221 12 3 364 25 359 5.25e-21 93.6
MS.gene87559.t1 MTR_4g129190 28.297 364 200 17 1 325 4 345 7.20e-21 93.6
MS.gene87559.t1 MTR_3g010920 26.494 385 213 15 3 364 44 381 7.81e-21 93.2
MS.gene87559.t1 MTR_3g010390 27.707 314 191 11 3 291 33 335 8.56e-21 93.2
MS.gene87559.t1 MTR_3g006500 27.249 389 220 16 3 364 17 369 8.66e-21 92.8
MS.gene87559.t1 MTR_3g010870 26.190 378 233 15 3 364 37 384 8.84e-21 93.2
MS.gene87559.t1 MTR_1g068835 27.324 355 218 15 2 341 3 332 9.20e-21 92.8
MS.gene87559.t1 MTR_3g006570 27.062 388 225 18 3 364 21 376 9.28e-21 92.8
MS.gene87559.t1 MTR_3g030240 25.926 378 224 13 3 364 40 377 1.14e-20 92.8
MS.gene87559.t1 MTR_2g025420 26.989 352 199 15 3 310 6 343 1.27e-20 93.2
MS.gene87559.t1 MTR_3g083640 26.579 380 229 15 3 364 55 402 1.29e-20 92.8
MS.gene87559.t1 MTR_4g031770 26.821 302 194 13 3 292 4 290 1.31e-20 92.4
MS.gene87559.t1 MTR_4g070550 28.571 329 171 14 2 287 4 311 1.66e-20 92.4
MS.gene87559.t1 MTR_0128s0020 27.273 407 218 16 3 363 18 392 1.73e-20 92.4
MS.gene87559.t1 MTR_2g046800 28.571 336 175 15 3 293 14 329 2.56e-20 92.0
MS.gene87559.t1 MTR_3g030250 23.885 381 233 11 3 364 37 379 2.64e-20 91.7
MS.gene87559.t1 MTR_7g078860 27.273 363 206 13 3 325 9 353 3.23e-20 91.7
MS.gene87559.t1 MTR_7g062060 26.585 410 233 17 3 365 12 400 3.47e-20 91.7
MS.gene87559.t1 MTR_3g464470 27.168 346 197 13 3 311 7 334 4.60e-20 90.9
MS.gene87559.t1 MTR_2g021252 27.986 293 184 10 6 292 50 321 4.89e-20 90.9
MS.gene87559.t1 MTR_2g426060 26.448 397 220 17 3 365 6 364 4.96e-20 91.3
MS.gene87559.t1 MTR_6g007135 27.922 308 192 11 3 292 26 321 6.02e-20 90.9
MS.gene87559.t1 MTR_2g031720 25.538 325 215 9 3 310 6 320 7.71e-20 90.5
MS.gene87559.t1 MTR_3g464500 28.161 348 194 15 3 311 27 357 8.05e-20 90.5
MS.gene87559.t1 MTR_3g436150 28.682 387 225 19 3 364 32 392 8.83e-20 90.1
MS.gene87559.t1 MTR_6g053240 26.935 323 200 13 2 305 27 332 9.64e-20 90.1
MS.gene87559.t1 MTR_7g079450 37.662 154 74 6 220 370 1 135 1.33e-19 84.3
MS.gene87559.t1 MTR_2g425980 26.131 398 232 17 2 363 4 375 1.36e-19 89.7
MS.gene87559.t1 MTR_6g004660 29.042 334 199 12 3 311 16 336 1.46e-19 89.4
MS.gene87559.t1 MTR_5g096710 28.218 404 224 19 3 366 23 400 1.58e-19 89.7
MS.gene87559.t1 MTR_4g023100 76.364 55 13 0 318 372 65 119 1.62e-19 83.6
MS.gene87559.t1 MTR_0064s0160 24.806 387 222 15 3 336 42 412 1.67e-19 89.7
MS.gene87559.t1 MTR_1g442850 27.735 393 214 16 5 349 7 377 1.71e-19 89.4
MS.gene87559.t1 MTR_1g056710 26.154 390 229 18 2 365 33 389 1.94e-19 89.4
MS.gene87559.t1 MTR_1g068860 26.349 315 189 12 1 293 2 295 1.95e-19 89.0
MS.gene87559.t1 MTR_7g055930 27.714 433 225 19 3 366 13 426 2.06e-19 89.4
MS.gene87559.t1 MTR_3g006670 30.645 310 164 17 3 287 49 332 2.17e-19 89.4
MS.gene87559.t1 MTR_4g129160 27.174 368 202 14 3 322 7 356 2.20e-19 89.0
MS.gene87559.t1 MTR_6g053260 27.726 321 195 14 2 305 336 636 2.24e-19 90.1
MS.gene87559.t1 MTR_3g011100 27.621 391 230 16 3 364 235 601 2.30e-19 90.1
MS.gene87559.t1 MTR_7g028660 26.374 364 208 13 3 324 11 356 2.59e-19 89.0
MS.gene87559.t1 MTR_7g066000 28.526 312 188 13 3 287 25 328 3.21e-19 88.6
MS.gene87559.t1 MTR_7g060960 30.931 333 163 18 3 311 32 321 3.54e-19 88.2
MS.gene87559.t1 MTR_3g024040 29.667 300 178 14 10 300 38 313 4.31e-19 88.2
MS.gene87559.t1 MTR_8g066440 26.055 403 235 15 4 366 24 403 4.39e-19 88.2
MS.gene87559.t1 MTR_8g099460 27.157 313 192 10 1 291 3 301 4.64e-19 88.2
MS.gene87559.t1 MTR_3g023940 25.065 387 228 12 3 364 34 383 5.35e-19 87.8
MS.gene87559.t1 MTR_3g036335 25.888 394 220 18 3 364 41 394 5.61e-19 87.8
MS.gene87559.t1 MTR_7g007300 28.289 304 177 11 3 292 103 379 7.07e-19 88.2
MS.gene87559.t1 MTR_7g066840 26.420 352 193 13 3 311 23 351 7.92e-19 87.4
MS.gene87559.t1 MTR_7g055870 27.064 436 224 18 3 366 13 426 8.12e-19 87.8
MS.gene87559.t1 MTR_7g407070 28.481 316 181 17 3 287 32 333 8.30e-19 87.4
MS.gene87559.t1 MTR_7g061060 26.562 320 178 12 3 287 13 310 8.56e-19 87.4
MS.gene87559.t1 MTR_2g024100 27.358 318 172 13 7 287 11 306 8.94e-19 87.4
MS.gene87559.t1 MTR_4g024890 26.243 362 226 15 4 339 11 357 1.03e-18 87.0
MS.gene87559.t1 MTR_1g054725 26.667 390 224 19 3 364 20 375 1.04e-18 87.0
MS.gene87559.t1 MTR_2g024110 27.019 322 206 12 2 307 3 311 1.10e-18 87.0
MS.gene87559.t1 MTR_0760s0010 29.195 298 174 12 8 293 52 324 1.72e-18 86.7
MS.gene87559.t1 MTR_7g056290 28.108 370 198 18 3 325 22 370 1.73e-18 86.7
MS.gene87559.t1 MTR_3g024110 27.986 293 183 10 3 287 101 373 1.85e-18 86.7
MS.gene87559.t1 MTR_7g061050 24.924 329 195 9 3 300 13 320 1.92e-18 86.3
MS.gene87559.t1 MTR_3g030330 25.902 305 184 8 3 292 20 297 1.99e-18 86.3
MS.gene87559.t1 MTR_4g019990 27.451 357 207 14 3 325 6 344 2.23e-18 86.3
MS.gene87559.t1 MTR_0707s0020 25.346 434 238 16 1 363 24 442 2.26e-18 86.7
MS.gene87559.t1 MTR_2g029990 27.105 380 229 17 4 364 52 402 2.59e-18 86.3
MS.gene87559.t1 MTR_7g066850 24.939 413 234 17 3 367 23 407 2.66e-18 86.3
MS.gene87559.t1 MTR_7g060940 28.977 352 181 13 3 311 22 347 3.12e-18 85.9
MS.gene87559.t1 MTR_3g011060 26.854 391 223 15 3 363 28 385 3.20e-18 85.5
MS.gene87559.t1 MTR_6g016285 25.728 412 252 16 3 368 21 424 3.64e-18 85.9
MS.gene87559.t1 MTR_3g010620 24.762 315 175 13 1 292 31 306 3.93e-18 85.5
MS.gene87559.t1 MTR_7g056760 26.537 309 201 9 3 287 23 329 4.05e-18 85.5
MS.gene87559.t1 MTR_7g050520 27.246 345 192 13 3 311 22 343 4.64e-18 85.1
MS.gene87559.t1 MTR_7g017130 30.284 317 185 16 2 287 17 328 6.38e-18 84.7
MS.gene87559.t1 MTR_3g009240 29.693 293 182 10 3 287 36 312 6.54e-18 84.7
MS.gene87559.t1 MTR_7g017170 30.284 317 185 16 2 287 17 328 7.27e-18 84.7
MS.gene87559.t1 MTR_0128s0070 27.228 404 225 18 1 363 20 395 7.70e-18 84.7
MS.gene87559.t1 MTR_5g056020 26.316 418 238 18 3 364 17 420 7.86e-18 85.1
MS.gene87559.t1 MTR_2g028110 25.148 338 198 12 2 310 3 314 8.25e-18 84.3
MS.gene87559.t1 MTR_1g055070 27.863 262 161 11 2 240 48 304 9.69e-18 84.3
MS.gene87559.t1 MTR_7g050480 27.246 345 192 14 3 311 22 343 1.01e-17 84.3
MS.gene87559.t1 MTR_3g030350 25.587 383 237 16 3 364 35 390 1.06e-17 84.3
MS.gene87559.t1 MTR_4g030980 25.823 395 214 13 3 329 15 398 1.41e-17 84.0
MS.gene87559.t1 MTR_6g017280 24.348 345 214 11 3 311 9 342 1.41e-17 84.0
MS.gene87559.t1 MTR_3g024150 27.604 384 217 15 6 364 38 385 1.61e-17 83.6
MS.gene87559.t1 MTR_5g069760 26.005 373 205 17 3 339 6 343 1.64e-17 83.6
MS.gene87559.t1 MTR_1g055375 27.303 304 191 14 6 292 7 297 1.85e-17 83.2
MS.gene87559.t1 MTR_7g056390 27.419 372 198 17 3 325 18 366 1.93e-17 83.6
MS.gene87559.t1 MTR_3g011020 26.178 382 221 14 3 363 28 369 2.57e-17 82.8
MS.gene87559.t1 MTR_2g437110 25.377 398 234 16 3 364 22 392 2.81e-17 83.6
MS.gene87559.t1 MTR_2g031680 24.316 329 207 11 3 310 6 313 3.16e-17 82.8
MS.gene87559.t1 MTR_8g012090 24.926 337 188 12 11 324 24 318 3.18e-17 82.0
MS.gene87559.t1 MTR_8g046200 29.107 347 176 15 6 291 19 356 3.26e-17 82.8
MS.gene87559.t1 MTR_6g086920 26.018 442 241 18 1 364 36 469 3.99e-17 83.2
MS.gene87559.t1 MTR_7g055987 28.758 306 170 14 6 286 23 305 4.31e-17 82.0
MS.gene87559.t1 MTR_5g046300 26.246 301 181 11 3 287 4 279 4.63e-17 82.0
MS.gene87559.t1 MTR_5g046290 26.246 301 181 11 3 287 4 279 4.63e-17 82.0
MS.gene87559.t1 MTR_7g022600 26.613 372 212 14 1 325 21 378 5.11e-17 82.4
MS.gene87559.t1 MTR_7g013590 29.180 305 180 16 6 292 39 325 5.95e-17 82.0
MS.gene87559.t1 MTR_2g021770 25.666 413 238 17 6 369 15 407 6.74e-17 82.0
MS.gene87559.t1 MTR_5g043160 28.657 335 180 13 5 289 52 377 6.86e-17 82.0
MS.gene87559.t1 MTR_1g061330 23.737 396 236 15 3 370 4 361 8.08e-17 81.6
MS.gene87559.t1 MTR_5g007610 28.617 311 177 12 3 287 41 332 1.08e-16 81.3
MS.gene87559.t1 MTR_3g010970 24.227 388 218 14 6 364 51 391 1.10e-16 81.3
MS.gene87559.t1 MTR_0128s0010 26.933 401 234 16 3 366 21 399 1.54e-16 80.9
MS.gene87559.t1 MTR_8g062660 24.495 396 228 15 3 364 22 380 1.72e-16 81.3
MS.gene87559.t1 MTR_7g052670 26.133 375 211 12 3 325 21 381 1.83e-16 80.9
MS.gene87559.t1 MTR_0649s0020 25.867 375 196 15 3 325 11 355 1.93e-16 80.5
MS.gene87559.t1 MTR_7g077970 26.100 341 197 10 3 300 7 335 1.99e-16 80.5
MS.gene87559.t1 MTR_4g030760 24.118 340 215 12 3 325 73 386 2.58e-16 80.5
MS.gene87559.t1 MTR_1g055145 48.315 89 43 2 13 99 43 130 2.83e-16 78.6
MS.gene87559.t1 MTR_5g027330 25.079 315 194 14 2 287 39 340 3.38e-16 80.1
MS.gene87559.t1 MTR_7g091640 28.221 326 171 13 3 287 35 338 3.45e-16 79.7
MS.gene87559.t1 MTR_3g437520 25.822 426 224 17 3 356 23 428 3.50e-16 80.1
MS.gene87559.t1 MTR_7g077070 26.044 407 229 17 3 351 16 408 3.52e-16 79.7
MS.gene87559.t1 MTR_2g031640 25.846 325 210 10 3 310 6 316 3.69e-16 79.7
MS.gene87559.t1 MTR_8g013005 65.455 55 17 1 318 370 3 57 3.88e-16 72.4
MS.gene87559.t1 MTR_5g069930 27.374 358 196 18 3 325 6 334 3.91e-16 79.3
MS.gene87559.t1 MTR_7g056003 31.024 332 152 16 6 289 18 320 4.45e-16 79.3
MS.gene87559.t1 MTR_8g073550 32.338 201 105 8 3 187 30 215 4.52e-16 77.0
MS.gene87559.t1 MTR_7g078840 25.576 434 241 14 3 365 10 432 4.59e-16 79.7
MS.gene87559.t1 MTR_4g028660 25.155 322 197 13 3 287 16 330 5.42e-16 79.0
MS.gene87559.t1 MTR_4g027450 25.155 322 197 13 3 287 16 330 5.42e-16 79.0
MS.gene87559.t1 MTR_5g027370 25.079 315 194 14 2 287 28 329 5.74e-16 79.3
MS.gene87559.t1 MTR_7g052150 27.429 350 194 14 3 311 22 352 6.30e-16 79.0
MS.gene87559.t1 MTR_5g046260 24.658 292 167 9 3 287 4 249 6.85e-16 77.8
MS.gene87559.t1 MTR_7g061090 25.915 328 182 12 3 287 22 331 7.46e-16 79.0
MS.gene87559.t1 MTR_4g028680 25.062 403 244 16 3 367 16 398 7.87e-16 78.6
MS.gene87559.t1 MTR_7g066030 24.939 413 230 15 3 365 21 403 8.45e-16 78.6
MS.gene87559.t1 MTR_1g015730 26.211 351 207 15 3 323 9 337 9.14e-16 78.6
MS.gene87559.t1 MTR_2g047892 24.935 385 211 15 3 343 22 372 9.24e-16 78.6
MS.gene87559.t1 MTR_3g009260 27.425 299 178 12 3 287 41 314 1.53e-15 77.8
MS.gene87559.t1 MTR_7g067680 27.143 350 201 15 3 332 49 364 1.59e-15 77.8
MS.gene87559.t1 MTR_7g066100 26.332 319 193 12 3 287 11 321 1.89e-15 77.4
MS.gene87559.t1 MTR_5g048160 25.182 413 235 20 2 366 3 389 2.28e-15 77.4
MS.gene87559.t1 MTR_4g130330 23.833 407 244 16 3 367 7 389 2.28e-15 77.4
MS.gene87559.t1 MTR_6g065510 26.087 345 155 14 3 325 23 289 2.45e-15 76.6
MS.gene87559.t1 MTR_7g056170 24.438 356 177 12 3 300 75 396 2.72e-15 77.4
MS.gene87559.t1 MTR_3g080370 26.238 404 237 15 17 372 35 425 2.78e-15 77.4
MS.gene87559.t1 MTR_7g035295 25.843 356 180 12 3 311 16 334 3.09e-15 77.0
MS.gene87559.t1 MTR_0242s0060 28.313 332 175 15 3 289 9 322 3.31e-15 77.0
MS.gene87559.t1 MTR_0242s0040 28.313 332 175 15 3 289 9 322 3.31e-15 77.0
MS.gene87559.t1 MTR_2g047200 26.110 383 218 16 3 347 20 375 3.32e-15 76.6
MS.gene87559.t1 MTR_3g058470 24.716 352 191 13 2 332 36 334 3.39e-15 76.6
MS.gene87559.t1 MTR_4g033495 26.140 329 186 13 3 294 27 335 3.84e-15 76.6
MS.gene87559.t1 MTR_7g091630 25.234 321 191 11 3 287 32 339 3.90e-15 76.6
MS.gene87559.t1 MTR_3g058480 27.273 264 149 11 2 240 38 283 4.78e-15 75.9
MS.gene87559.t1 MTR_7g066080 25.485 412 248 19 3 366 16 416 4.89e-15 76.6
MS.gene87559.t1 MTR_5g097330 25.304 411 236 16 5 369 18 403 5.05e-15 76.3
MS.gene87559.t1 MTR_3g011120 25.902 305 199 12 3 287 14 311 5.31e-15 75.9
MS.gene87559.t1 MTR_2g010900 26.752 314 181 12 23 300 3 303 6.23e-15 75.9
MS.gene87559.t1 MTR_7g078900 24.433 397 240 15 6 359 15 394 6.42e-15 76.3
MS.gene87559.t1 MTR_7g055977 26.593 361 198 15 3 325 7 338 6.73e-15 75.9
MS.gene87559.t1 MTR_6g017270 24.207 347 181 13 3 325 9 297 6.79e-15 75.5
MS.gene87559.t1 MTR_2g006360 30.345 290 145 14 6 289 49 287 8.06e-15 75.5
MS.gene87559.t1 MTR_6g086825 25.610 328 193 12 3 286 70 390 8.51e-15 75.9
MS.gene87559.t1 MTR_7g022670 27.536 345 168 14 3 325 23 307 8.56e-15 75.1
MS.gene87559.t1 MTR_0097s0030 27.005 374 203 16 1 339 12 350 1.07e-14 75.1
MS.gene87559.t1 MTR_2g047240 27.005 374 203 16 1 339 12 350 1.07e-14 75.1
MS.gene87559.t1 MTR_8g101940 25.148 338 207 10 3 311 2 322 1.13e-14 75.1
MS.gene87559.t1 MTR_6g055210 25.654 382 224 14 3 337 22 390 1.23e-14 75.5
MS.gene87559.t1 MTR_4g080200 28.740 254 147 11 1 239 1 235 1.25e-14 74.7
MS.gene87559.t1 MTR_2g026010 27.492 331 203 13 2 310 3 318 1.30e-14 75.1
MS.gene87559.t1 MTR_7g078040 26.457 446 224 20 3 365 9 433 1.34e-14 75.1
MS.gene87559.t1 MTR_7g016930 24.183 306 196 11 3 288 16 305 1.40e-14 74.3
MS.gene87559.t1 MTR_3g058440 28.163 245 145 11 2 228 34 265 1.47e-14 73.9
MS.gene87559.t1 MTR_5g057643 30.472 233 138 9 3 223 46 266 1.52e-14 73.6
MS.gene87559.t1 MTR_8g464770 24.694 409 218 16 3 365 12 376 1.66e-14 74.7
MS.gene87559.t1 MTR_4g037465 27.195 353 203 15 3 325 21 349 1.68e-14 74.7
MS.gene87559.t1 MTR_4g030090 25.203 369 203 16 4 325 15 357 1.94e-14 74.3
MS.gene87559.t1 MTR_5g068040 27.742 310 173 12 3 287 16 299 2.38e-14 73.9
MS.gene87559.t1 MTR_5g097350 23.136 389 234 14 12 365 25 383 2.43e-14 73.9
MS.gene87559.t1 MTR_4g031020 24.810 395 218 14 3 329 15 398 2.67e-14 74.3
MS.gene87559.t1 MTR_7g061010 26.801 347 189 12 3 311 22 341 5.04e-14 73.2
MS.gene87559.t1 MTR_4g013185 26.835 395 210 16 6 335 13 393 5.20e-14 73.2
MS.gene87559.t1 MTR_3g010870 26.923 234 140 9 3 224 37 251 5.26e-14 72.4
MS.gene87559.t1 MTR_0831s0010 26.115 314 200 9 3 291 50 356 5.81e-14 73.2
MS.gene87559.t1 MTR_7g056710 26.757 370 214 16 3 337 18 365 6.66e-14 72.8
MS.gene87559.t1 MTR_1g055200 44.444 99 45 3 97 189 5 99 6.67e-14 67.8
MS.gene87559.t1 MTR_2g078850 25.714 350 218 16 6 339 33 356 7.12e-14 72.4
MS.gene87559.t1 MTR_7g056797 24.873 394 250 13 3 364 23 402 7.21e-14 72.8
MS.gene87559.t1 MTR_7g050490 32.161 199 102 7 3 186 8 188 8.86e-14 69.7
MS.gene87559.t1 MTR_1g097370 23.423 333 156 13 3 325 68 311 9.31e-14 72.8
MS.gene87559.t1 MTR_3g007300 27.177 379 198 18 3 364 49 366 1.04e-13 72.0
MS.gene87559.t1 MTR_0464s0020 26.923 338 177 14 3 289 23 341 1.25e-13 72.0
MS.gene87559.t1 MTR_7g055830 25.301 415 192 16 3 367 13 359 1.28e-13 71.6
MS.gene87559.t1 MTR_5g069390 24.265 408 252 19 3 369 26 417 1.34e-13 72.4
MS.gene87559.t1 MTR_8g046310 25.484 310 191 12 6 291 19 312 1.49e-13 71.6
MS.gene87559.t1 MTR_7g056200 26.154 325 160 12 3 289 23 305 1.75e-13 71.6
MS.gene87559.t1 MTR_1g115160 25.817 306 188 12 1 293 20 299 1.81e-13 71.2
MS.gene87559.t1 MTR_5g037680 24.234 359 206 15 3 325 8 336 1.87e-13 71.6
MS.gene87559.t1 MTR_5g086590 31.088 193 118 9 107 291 9 194 2.39e-13 69.3
MS.gene87559.t1 MTR_5g057040 30.303 198 104 8 3 190 46 219 2.80e-13 72.0
MS.gene87559.t1 MTR_7g069550 26.234 385 197 17 3 334 14 364 3.12e-13 70.9
MS.gene87559.t1 MTR_6g048140 27.523 327 163 16 3 292 39 328 3.44e-13 70.9
MS.gene87559.t1 MTR_8g064890 25.478 314 189 12 6 287 19 319 3.48e-13 70.5
MS.gene87559.t1 MTR_8g039500 23.411 299 213 7 3 287 12 308 3.91e-13 70.1
MS.gene87559.t1 MTR_6g080680 24.688 320 202 10 3 291 19 330 4.85e-13 70.1
MS.gene87559.t1 MTR_7g056260 25.610 328 175 13 3 289 14 313 4.92e-13 69.7
MS.gene87559.t1 MTR_4g030110 24.513 359 200 13 3 325 30 353 5.11e-13 70.1
MS.gene87559.t1 MTR_8g063440 24.845 322 194 12 3 291 12 318 5.23e-13 70.1
MS.gene87559.t1 MTR_2g046860 26.407 231 146 10 95 311 6 226 5.27e-13 69.7
MS.gene87559.t1 MTR_4g055820 23.867 331 204 11 3 291 14 338 6.49e-13 69.7
MS.gene87559.t1 MTR_1g114700 29.524 315 174 17 3 293 29 319 6.61e-13 69.7
MS.gene87559.t1 MTR_6g034830 35.652 115 58 2 1 113 18 118 1.12e-12 64.7
MS.gene87559.t1 MTR_8g063370 25.333 300 200 10 5 286 26 319 1.28e-12 68.9
MS.gene87559.t1 MTR_4g013175 25.474 369 216 10 6 325 13 371 1.38e-12 68.9
MS.gene87559.t1 MTR_8g063330 26.611 357 198 19 3 315 14 350 1.42e-12 68.9
MS.gene87559.t1 MTR_5g023570 36.111 108 59 3 3 107 37 137 1.56e-12 65.1
MS.gene87559.t1 MTR_0054s0090 25.000 332 191 13 3 287 17 337 1.64e-12 68.6
MS.gene87559.t1 MTR_2g043400 27.660 329 174 11 3 289 23 329 2.22e-12 68.2
MS.gene87559.t1 MTR_3g007390 32.026 153 89 6 138 287 1 141 2.40e-12 65.9
MS.gene87559.t1 MTR_2g031700 26.848 257 154 10 3 248 6 239 2.73e-12 67.0
MS.gene87559.t1 MTR_6g013270 24.510 306 202 13 3 293 29 320 4.00e-12 67.4
MS.gene87559.t1 MTR_7g009265 26.923 260 152 9 95 325 30 280 4.14e-12 67.0
MS.gene87559.t1 MTR_2g021210 26.351 296 194 11 3 292 84 361 5.13e-12 67.4
MS.gene87559.t1 MTR_6g017305 25.871 201 126 7 102 287 5 197 9.36e-12 65.5
MS.gene87559.t1 MTR_5g059430 23.529 340 204 14 3 291 26 360 1.06e-11 66.2
MS.gene87559.t1 MTR_3g010440 24.262 305 158 8 3 301 26 263 1.16e-11 65.5
MS.gene87559.t1 MTR_8g041270 22.302 417 249 13 3 369 15 406 1.22e-11 65.9
MS.gene87559.t1 MTR_2g010950 24.318 403 250 17 1 364 18 404 1.36e-11 65.9
MS.gene87559.t1 MTR_3g030310 25.429 350 201 15 3 325 21 337 1.52e-11 65.5
MS.gene87559.t1 MTR_7g056717 27.273 308 174 14 8 287 27 312 1.53e-11 65.5
MS.gene87559.t1 MTR_3g011650 28.125 224 128 9 6 216 82 285 1.55e-11 64.7
MS.gene87559.t1 MTR_5g022090 23.779 307 176 11 2 287 33 302 1.95e-11 65.5
MS.gene87559.t1 MTR_4g024870 24.675 231 144 7 4 216 45 263 2.35e-11 65.1
MS.gene87559.t1 MTR_2g021950 23.101 316 205 11 6 287 19 330 3.22e-11 64.7
MS.gene87559.t1 MTR_0054s0100 23.653 334 195 12 3 287 17 339 3.48e-11 64.7
MS.gene87559.t1 MTR_6g092560 25.140 358 200 16 3 311 12 350 3.83e-11 64.7
MS.gene87559.t1 MTR_6g461660 24.079 353 216 16 3 316 19 358 3.92e-11 64.3
MS.gene87559.t1 MTR_3g009250 28.000 225 130 9 3 215 41 245 5.02e-11 62.8
MS.gene87559.t1 MTR_7g066010 26.374 273 155 10 3 239 21 283 5.07e-11 63.9
MS.gene87559.t1 MTR_5g075370 25.000 340 179 15 5 287 10 330 6.27e-11 64.3
MS.gene87559.t1 MTR_1g112930 25.796 314 178 13 3 293 25 306 7.34e-11 63.5
MS.gene87559.t1 MTR_5g074870 56.818 44 19 0 2 45 81 124 8.04e-11 60.5
MS.gene87559.t1 MTR_1g007410 24.316 329 191 14 3 287 22 336 8.80e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87559.t1 AT4G12560 28.049 328 207 12 3 309 4 323 7.75e-27 110
MS.gene87559.t1 AT4G12560 28.049 328 207 12 3 309 4 323 7.75e-27 110
MS.gene87559.t1 AT4G12560 28.049 328 207 12 3 309 4 323 7.75e-27 110
MS.gene87559.t1 AT3G06240 26.585 410 227 12 3 364 36 419 1.90e-23 101
MS.gene87559.t1 AT3G23880 27.586 319 201 12 2 307 13 314 1.94e-21 94.7
MS.gene87559.t1 AT4G22390 26.284 331 207 12 2 309 3 319 4.48e-19 88.2
MS.gene87559.t1 AT4G22390 26.284 331 207 12 2 309 3 319 4.89e-19 88.2
MS.gene87559.t1 AT1G11620 25.373 335 198 14 1 310 4 311 3.13e-16 79.7
MS.gene87559.t1 AT3G17500 26.710 307 191 17 2 294 4 290 8.83e-15 75.5
MS.gene87559.t1 AT3G16210 26.936 297 177 11 3 291 5 269 1.19e-14 74.7
MS.gene87559.t1 AT3G17500 26.710 307 191 17 2 294 3 289 1.41e-14 75.1
MS.gene87559.t1 AT4G19940 25.161 310 200 10 2 291 34 331 2.76e-14 74.3
MS.gene87559.t1 AT1G47790 24.342 304 193 11 4 294 26 305 3.07e-14 73.9
MS.gene87559.t1 AT2G40925 24.451 319 192 12 2 293 26 322 4.31e-14 73.6
MS.gene87559.t1 AT3G21120 23.438 256 171 9 1 242 1 245 4.98e-14 73.2
MS.gene87559.t1 AT3G16590 24.742 291 185 11 3 277 5 277 3.16e-13 70.9
MS.gene87559.t1 AT3G21410 23.708 329 195 14 3 299 38 342 3.99e-13 70.5
MS.gene87559.t1 AT3G08750 23.843 281 179 9 3 275 12 265 6.34e-12 66.6
MS.gene87559.t1 AT3G10430 27.888 251 145 15 3 238 5 234 7.17e-12 66.6
MS.gene87559.t1 AT1G33530 25.392 319 204 13 1 309 95 389 7.35e-12 67.0
MS.gene87559.t1 AT3G52320 24.390 246 171 7 2 240 26 263 1.11e-11 66.2
MS.gene87559.t1 AT1G19160 26.837 313 188 15 3 303 2 285 1.25e-11 65.9
MS.gene87559.t1 AT3G17540 23.103 290 177 10 2 263 9 280 2.64e-11 65.1
MS.gene87559.t1 AT1G12870 22.312 372 241 16 3 350 33 380 2.86e-11 65.1
MS.gene87559.t1 AT5G49610 25.817 306 174 14 4 286 10 285 3.23e-11 64.7
MS.gene87559.t1 AT2G40910 22.840 324 193 13 2 293 61 359 5.58e-11 64.3
MS.gene87559.t1 AT3G49980 22.697 304 203 8 1 287 4 292 6.30e-11 63.9
MS.gene87559.t1 AT3G49980 22.697 304 203 8 1 287 3 291 6.69e-11 63.5
MS.gene87559.t1 AT1G47390 25.517 290 174 10 3 277 7 269 7.95e-11 63.5
MS.gene87559.t1 AT3G10240 25.000 312 179 19 3 292 27 305 8.28e-11 63.5
MS.gene87559.t1 AT2G40910 23.292 322 191 12 2 291 68 365 9.27e-11 63.5

Find 79 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAATGGATTACATTTAT+TGG 0.150019 4.1:+75254379 None:intergenic
ACAGAAAATGGTGATATTAT+TGG 0.164193 4.1:-75253891 MS.gene87559:CDS
CATTCTGGTTTGTGGGTATT+TGG 0.166612 4.1:-75254101 MS.gene87559:CDS
GCTCTGTGGTCAACATTATT+TGG 0.173886 4.1:+75254131 None:intergenic
CATTGTTGGCTTTGATTTAA+TGG 0.174382 4.1:-75254180 MS.gene87559:CDS
TTCCCTTATGTCGTTGATTA+TGG 0.178480 4.1:-75254275 MS.gene87559:CDS
GTGAAAGTAGTCCGCATTTC+TGG 0.200250 4.1:+75253926 None:intergenic
AAATCAATTGATCGAATTTC+AGG 0.224377 4.1:+75254659 None:intergenic
GGTGACAATGAGCCTGTTTA+AGG 0.228839 4.1:-75253747 None:intergenic
AAAACATATATTACTCTATA+TGG 0.230356 4.1:-75254449 MS.gene87559:CDS
TTGGAGAATTTCTCAGTATA+TGG 0.239627 4.1:-75254082 MS.gene87559:CDS
CCTATATATTCTACAGAAAA+TGG 0.261164 4.1:-75253903 MS.gene87559:CDS
TATATTACTCTATATGGTTT+TGG 0.286814 4.1:-75254443 MS.gene87559:CDS
ATAATGATACAATTGAAATA+TGG 0.287461 4.1:-75254046 MS.gene87559:CDS
ATATAGAGTAATATATGTTT+TGG 0.322465 4.1:+75254451 None:intergenic
TCAAATGCGTTTGTAAGTTA+TGG 0.325488 4.1:-75254778 MS.gene87559:CDS
GGTGATATTATTGGAAAATA+TGG 0.325508 4.1:-75253882 MS.gene87559:CDS
CACAGAGCATTAGTACATTC+TGG 0.337046 4.1:-75254116 MS.gene87559:CDS
TCAAATTCTGTTGAGGTTAC+CGG 0.341661 4.1:-75254819 MS.gene87559:CDS
TTTGTGCCATCTCCTTAAAC+AGG 0.377917 4.1:+75253735 None:intergenic
TCTCCATAATCAACGACATA+AGG 0.405779 4.1:+75254272 None:intergenic
TGGAGAATTTCTCAGTATAT+GGG 0.411388 4.1:-75254081 MS.gene87559:CDS
ATTTCTCAGTATATGGGTTA+AGG 0.418550 4.1:-75254075 MS.gene87559:CDS
TAATGGGGCTATTCATTGGT+TGG 0.421138 4.1:-75254231 MS.gene87559:CDS
GGATTCCATATGTAGATGTT+TGG 0.424103 4.1:+75254518 None:intergenic
ATTAGTACATTCTGGTTTGT+GGG 0.428082 4.1:-75254108 MS.gene87559:CDS
CATTAGTACATTCTGGTTTG+TGG 0.428815 4.1:-75254109 MS.gene87559:CDS
CATGACCCTTTAATTTCAAC+GGG 0.433411 4.1:+75254569 None:intergenic
AATACAAAGTGCATTTGTCT+TGG 0.438020 4.1:-75254013 MS.gene87559:CDS
CAGTTATAGTTCGGTGAAGC+AGG 0.441260 4.1:+75254614 None:intergenic
AAATGTAATCCATTCTTAGT+TGG 0.444016 4.1:-75254374 MS.gene87559:CDS
CTCCATAATCAACGACATAA+GGG 0.469919 4.1:+75254273 None:intergenic
TAATGATACAATTGAAATAT+GGG 0.471725 4.1:-75254045 MS.gene87559:CDS
TCTCGTTTAGAGACAATACT+TGG 0.472530 4.1:-75254319 MS.gene87559:CDS
ATAGCTTTGGATGCCATTGT+TGG 0.473343 4.1:-75254194 MS.gene87559:CDS
TTCGCGTCGTGATATAGCTT+TGG 0.477282 4.1:-75254207 MS.gene87559:CDS
GTCATCCAAACATCTACATA+TGG 0.477819 4.1:-75254523 MS.gene87559:CDS
TCAACGGGAAAATAAGAGTC+TGG 0.484289 4.1:+75254584 None:intergenic
GTAAAACCACCAACTAAGAA+TGG 0.485862 4.1:+75254365 None:intergenic
GCATTTCTGGAATAATATAG+AGG 0.489061 4.1:+75253939 None:intergenic
ACATGACCCTTTAATTTCAA+CGG 0.494954 4.1:+75254568 None:intergenic
TGTAATCCATTCTTAGTTGG+TGG 0.495212 4.1:-75254371 MS.gene87559:CDS
AGAGGGTTAAAGTAGTTACT+AGG 0.496818 4.1:+75253957 None:intergenic
TTGATTATGGAGAAGGAGAA+GGG 0.504656 4.1:-75254262 MS.gene87559:CDS
TCAAAGCATGGATCTTCCTC+AGG 0.510641 4.1:-75254852 None:intergenic
TGGTCAACATTATTTGGAAG+AGG 0.517796 4.1:+75254137 None:intergenic
GGAAGGGAACAGTTATAGTT+CGG 0.528741 4.1:+75254605 None:intergenic
TGTGTGTTGCAAGGTTAAGT+TGG 0.532063 4.1:+75254714 None:intergenic
CGGGAAAATAAGAGTCTGGA+AGG 0.536048 4.1:+75254588 None:intergenic
TATGTCGTTGATTATGGAGA+AGG 0.538860 4.1:-75254269 MS.gene87559:CDS
TTGGCTTTGATTTAATGGAA+AGG 0.539588 4.1:-75254175 MS.gene87559:CDS
AAAATATGGTGGTACTAGAT+TGG 0.540379 4.1:-75253868 MS.gene87559:CDS
GAGTCGCTACTTTCACTCTC+TGG 0.542238 4.1:-75253768 MS.gene87559:CDS
TGATGATTCAAATTCTGTTG+AGG 0.546882 4.1:-75254826 MS.gene87559:CDS
GAAATTAAAGGGTCATGTAG+AGG 0.547428 4.1:-75254563 MS.gene87559:CDS
TACATATGGAATCCATCTAC+CGG 0.554145 4.1:-75254509 MS.gene87559:CDS
CCACATAATCATCTCTAGAC+TGG 0.557773 4.1:+75254414 None:intergenic
CATTAAATCAAAGCCAACAA+TGG 0.566131 4.1:+75254181 None:intergenic
CTCGGTATACACGACAACTT+CGG 0.566711 4.1:+75253788 None:intergenic
GTTGATTATGGAGAAGGAGA+AGG 0.582233 4.1:-75254263 MS.gene87559:CDS
TTATGGAGAAGGAGAAGGGG+TGG 0.588306 4.1:-75254258 MS.gene87559:CDS
TTCGGATGGACTGTTGCAGA+AGG 0.589220 4.1:+75253806 None:intergenic
CATTTCTGGAATAATATAGA+GGG 0.592434 4.1:+75253940 None:intergenic
ATCTACGAGTGTGTGTTGCA+AGG 0.599931 4.1:+75254705 None:intergenic
GTCTAGAGATGATTATGTGG+TGG 0.603968 4.1:-75254411 MS.gene87559:CDS
ATATGTAGATGTTTGGATGA+CGG 0.606207 4.1:+75254525 None:intergenic
GTATACACGACAACTTCGGA+TGG 0.615119 4.1:+75253792 None:intergenic
CAATACTTGGAAAGAAATCG+AGG 0.619297 4.1:-75254306 MS.gene87559:CDS
ATTTGAATCATCAGTTCCTG+AGG 0.625709 4.1:+75254836 None:intergenic
TTGGTGAAGTATAATGACAA+AGG 0.639076 4.1:-75253849 MS.gene87559:CDS
GATATTATTGGAAAATATGG+TGG 0.639099 4.1:-75253879 MS.gene87559:CDS
TTACTAGGAATGAAATGCTG+AGG 0.640870 4.1:+75253972 None:intergenic
CCAGTCTAGAGATGATTATG+TGG 0.642654 4.1:-75254414 MS.gene87559:CDS
TGATTATGGAGAAGGAGAAG+GGG 0.649695 4.1:-75254261 MS.gene87559:CDS
TCTATATTATTCCAGAAATG+CGG 0.659736 4.1:-75253937 MS.gene87559:CDS
AGAGAGTGAAAGTAGCGACT+CGG 0.677615 4.1:+75253770 None:intergenic
AATACTTGGAAAGAAATCGA+GGG 0.689376 4.1:-75254305 MS.gene87559:CDS
GGGAAAATAAGAGTCTGGAA+GGG 0.700725 4.1:+75254589 None:intergenic
CAGAATGTACTAATGCTCTG+TGG 0.704221 4.1:+75254117 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATATATTACTCTATA+TGG - chr4.1:75254145-75254164 MS.gene87559:CDS 15.0%
!! ATAATGATACAATTGAAATA+TGG - chr4.1:75254548-75254567 MS.gene87559:CDS 15.0%
!! TAATGATACAATTGAAATAT+GGG - chr4.1:75254549-75254568 MS.gene87559:CDS 15.0%
!!! ATATAGAGTAATATATGTTT+TGG + chr4.1:75254146-75254165 None:intergenic 15.0%
!!! CATTTTCTGTAGAATATATA+GGG + chr4.1:75254693-75254712 None:intergenic 20.0%
!!! TAAGAATGGATTACATTTAT+TGG + chr4.1:75254218-75254237 None:intergenic 20.0%
!!! TATATTACTCTATATGGTTT+TGG - chr4.1:75254151-75254170 MS.gene87559:CDS 20.0%
! AAAAATATAAGAGACTTCAC+CGG + chr4.1:75253797-75253816 None:intergenic 25.0%
! AAATCAATTGATCGAATTTC+AGG + chr4.1:75253938-75253957 None:intergenic 25.0%
! AAATGTAATCCATTCTTAGT+TGG - chr4.1:75254220-75254239 MS.gene87559:CDS 25.0%
! ACAGAAAATGGTGATATTAT+TGG - chr4.1:75254703-75254722 MS.gene87559:CDS 25.0%
! CCTATATATTCTACAGAAAA+TGG - chr4.1:75254691-75254710 MS.gene87559:CDS 25.0%
! GATATTATTGGAAAATATGG+TGG - chr4.1:75254715-75254734 MS.gene87559:CDS 25.0%
! GGTGATATTATTGGAAAATA+TGG - chr4.1:75254712-75254731 MS.gene87559:CDS 25.0%
! TCTATATTATTCCAGAAATG+CGG - chr4.1:75254657-75254676 MS.gene87559:CDS 25.0%
!! AAATGTGAATTTTCAAAGTG+AGG + chr4.1:75253860-75253879 None:intergenic 25.0%
!! ATTTTCCCGTTGAAATTAAA+GGG - chr4.1:75254020-75254039 MS.gene87559:CDS 25.0%
!! CCATTTTCTGTAGAATATAT+AGG + chr4.1:75254694-75254713 None:intergenic 25.0%
!! TATTTTCCCGTTGAAATTAA+AGG - chr4.1:75254019-75254038 MS.gene87559:CDS 25.0%
!!! CATTTCTGGAATAATATAGA+GGG + chr4.1:75254657-75254676 None:intergenic 25.0%
AAAATATGGTGGTACTAGAT+TGG - chr4.1:75254726-75254745 MS.gene87559:CDS 30.0%
AATACAAAGTGCATTTGTCT+TGG - chr4.1:75254581-75254600 MS.gene87559:CDS 30.0%
AATACTTGGAAAGAAATCGA+GGG - chr4.1:75254289-75254308 MS.gene87559:CDS 30.0%
AGAAAAACTCCAAATGTGAT+TGG + chr4.1:75254258-75254277 None:intergenic 30.0%
ATATGTAGATGTTTGGATGA+CGG + chr4.1:75254072-75254091 None:intergenic 30.0%
CATTAAATCAAAGCCAACAA+TGG + chr4.1:75254416-75254435 None:intergenic 30.0%
TCAAATGCGTTTGTAAGTTA+TGG - chr4.1:75253816-75253835 MS.gene87559:CDS 30.0%
TGATGATTCAAATTCTGTTG+AGG - chr4.1:75253768-75253787 MS.gene87559:CDS 30.0%
TGGAGAATTTCTCAGTATAT+GGG - chr4.1:75254513-75254532 MS.gene87559:CDS 30.0%
TTGGAGAATTTCTCAGTATA+TGG - chr4.1:75254512-75254531 MS.gene87559:CDS 30.0%
TTGGTGAAGTATAATGACAA+AGG - chr4.1:75254745-75254764 MS.gene87559:CDS 30.0%
! AATGACAAAGGACAGTTTTT+AGG - chr4.1:75254757-75254776 MS.gene87559:CDS 30.0%
! ACATGACCCTTTAATTTCAA+CGG + chr4.1:75254029-75254048 None:intergenic 30.0%
! ATGACAAAGGACAGTTTTTA+GGG - chr4.1:75254758-75254777 MS.gene87559:CDS 30.0%
! ATTTCTCAGTATATGGGTTA+AGG - chr4.1:75254519-75254538 MS.gene87559:CDS 30.0%
! TTTTACTGTCCAATCACATT+TGG - chr4.1:75254246-75254265 MS.gene87559:CDS 30.0%
! TTTTTAATGGGGCTATTCAT+TGG - chr4.1:75254359-75254378 MS.gene87559:CDS 30.0%
!! ATTAGTACATTCTGGTTTGT+GGG - chr4.1:75254486-75254505 MS.gene87559:CDS 30.0%
!! CATTGTTGGCTTTGATTTAA+TGG - chr4.1:75254414-75254433 MS.gene87559:CDS 30.0%
!! GCATTTCTGGAATAATATAG+AGG + chr4.1:75254658-75254677 None:intergenic 30.0%
!! TTGGCTTTGATTTAATGGAA+AGG - chr4.1:75254419-75254438 MS.gene87559:CDS 30.0%
AGAGGGTTAAAGTAGTTACT+AGG + chr4.1:75254640-75254659 None:intergenic 35.0%
ATTTGAATCATCAGTTCCTG+AGG + chr4.1:75253761-75253780 None:intergenic 35.0%
CAATACTTGGAAAGAAATCG+AGG - chr4.1:75254288-75254307 MS.gene87559:CDS 35.0%
CTCCATAATCAACGACATAA+GGG + chr4.1:75254324-75254343 None:intergenic 35.0%
GAAATTAAAGGGTCATGTAG+AGG - chr4.1:75254031-75254050 MS.gene87559:CDS 35.0%
GGATTCCATATGTAGATGTT+TGG + chr4.1:75254079-75254098 None:intergenic 35.0%
GTAAAACCACCAACTAAGAA+TGG + chr4.1:75254232-75254251 None:intergenic 35.0%
GTCATCCAAACATCTACATA+TGG - chr4.1:75254071-75254090 MS.gene87559:CDS 35.0%
TACATATGGAATCCATCTAC+CGG - chr4.1:75254085-75254104 MS.gene87559:CDS 35.0%
TCAAATTCTGTTGAGGTTAC+CGG - chr4.1:75253775-75253794 MS.gene87559:CDS 35.0%
TCTCCATAATCAACGACATA+AGG + chr4.1:75254325-75254344 None:intergenic 35.0%
TCTCGTTTAGAGACAATACT+TGG - chr4.1:75254275-75254294 MS.gene87559:CDS 35.0%
TGGTCAACATTATTTGGAAG+AGG + chr4.1:75254460-75254479 None:intergenic 35.0%
TGTAATCCATTCTTAGTTGG+TGG - chr4.1:75254223-75254242 MS.gene87559:CDS 35.0%
TTACTAGGAATGAAATGCTG+AGG + chr4.1:75254625-75254644 None:intergenic 35.0%
TTGATTATGGAGAAGGAGAA+GGG - chr4.1:75254332-75254351 MS.gene87559:CDS 35.0%
! AAGCATTTGTCTTTTCGATC+CGG + chr4.1:75254107-75254126 None:intergenic 35.0%
! CATGACCCTTTAATTTCAAC+GGG + chr4.1:75254028-75254047 None:intergenic 35.0%
! TATGTCGTTGATTATGGAGA+AGG - chr4.1:75254325-75254344 MS.gene87559:CDS 35.0%
! TTCCCTTATGTCGTTGATTA+TGG - chr4.1:75254319-75254338 MS.gene87559:CDS 35.0%
!! CATTAGTACATTCTGGTTTG+TGG - chr4.1:75254485-75254504 MS.gene87559:CDS 35.0%
CAGAATGTACTAATGCTCTG+TGG + chr4.1:75254480-75254499 None:intergenic 40.0%
CCACATAATCATCTCTAGAC+TGG + chr4.1:75254183-75254202 None:intergenic 40.0%
CCAGTCTAGAGATGATTATG+TGG - chr4.1:75254180-75254199 MS.gene87559:CDS 40.0%
GCTCTGTGGTCAACATTATT+TGG + chr4.1:75254466-75254485 None:intergenic 40.0%
GGAAGGGAACAGTTATAGTT+CGG + chr4.1:75253992-75254011 None:intergenic 40.0%
GGGAAAATAAGAGTCTGGAA+GGG + chr4.1:75254008-75254027 None:intergenic 40.0%
GTCTAGAGATGATTATGTGG+TGG - chr4.1:75254183-75254202 MS.gene87559:CDS 40.0%
GTTGATTATGGAGAAGGAGA+AGG - chr4.1:75254331-75254350 MS.gene87559:CDS 40.0%
TAATGGGGCTATTCATTGGT+TGG - chr4.1:75254363-75254382 MS.gene87559:CDS 40.0%
TCAACGGGAAAATAAGAGTC+TGG + chr4.1:75254013-75254032 None:intergenic 40.0%
TGATTATGGAGAAGGAGAAG+GGG - chr4.1:75254333-75254352 MS.gene87559:CDS 40.0%
TGTGTGTTGCAAGGTTAAGT+TGG + chr4.1:75253883-75253902 None:intergenic 40.0%
! AGAAGGGGTGGTTTTTAATG+GGG - chr4.1:75254348-75254367 MS.gene87559:CDS 40.0%
! CACAGAGCATTAGTACATTC+TGG - chr4.1:75254478-75254497 MS.gene87559:CDS 40.0%
! GAGAAGGGGTGGTTTTTAAT+GGG - chr4.1:75254347-75254366 MS.gene87559:CDS 40.0%
!! ATAGCTTTGGATGCCATTGT+TGG - chr4.1:75254400-75254419 MS.gene87559:CDS 40.0%
!! CATTCTGGTTTGTGGGTATT+TGG - chr4.1:75254493-75254512 MS.gene87559:CDS 40.0%
AGAGAGTGAAAGTAGCGACT+CGG + chr4.1:75254827-75254846 None:intergenic 45.0%
ATCTACGAGTGTGTGTTGCA+AGG + chr4.1:75253892-75253911 None:intergenic 45.0%
CGGGAAAATAAGAGTCTGGA+AGG + chr4.1:75254009-75254028 None:intergenic 45.0%
CTCGGTATACACGACAACTT+CGG + chr4.1:75254809-75254828 None:intergenic 45.0%
GTATACACGACAACTTCGGA+TGG + chr4.1:75254805-75254824 None:intergenic 45.0%
GTGAAAGTAGTCCGCATTTC+TGG + chr4.1:75254671-75254690 None:intergenic 45.0%
TTCGCGTCGTGATATAGCTT+TGG - chr4.1:75254387-75254406 MS.gene87559:CDS 45.0%
! CAGTTATAGTTCGGTGAAGC+AGG + chr4.1:75253983-75254002 None:intergenic 45.0%
! GGAGAAGGGGTGGTTTTTAA+TGG - chr4.1:75254346-75254365 MS.gene87559:CDS 45.0%
! TGTCTTTTCGATCCGGTAGA+TGG + chr4.1:75254100-75254119 None:intergenic 45.0%
TTATGGAGAAGGAGAAGGGG+TGG - chr4.1:75254336-75254355 MS.gene87559:CDS 50.0%
! GAGTCGCTACTTTCACTCTC+TGG - chr4.1:75254826-75254845 MS.gene87559:CDS 50.0%
!! TTCGGATGGACTGTTGCAGA+AGG + chr4.1:75254791-75254810 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 75253749 75254867 75253749 ID=MS.gene87559
chr4.1 mRNA 75253749 75254867 75253749 ID=MS.gene87559.t1;Parent=MS.gene87559
chr4.1 exon 75253749 75254867 75253749 ID=MS.gene87559.t1.exon1;Parent=MS.gene87559.t1
chr4.1 CDS 75253749 75254867 75253749 ID=cds.MS.gene87559.t1;Parent=MS.gene87559.t1
Gene Sequence

>MS.gene87559

ATGGATCTTCCTCAGGAACTGATGATTCAAATTCTGTTGAGGTTACCGGTGAAGTCTCTTATATTTTTCAAATGCGTTTGTAAGTTATGGTTTTCTATTATCTCTGATCCTCACTTTGAAAATTCACATTTCCAACTTAACCTTGCAACACACACTCGTAGATTTTTATGCATTTCAGCTCTATCTCCTGAAATTCGATCAATTGATTTTGATGCATTTCTTAACGATGCTCCTGCTTCACCGAACTATAACTGTTCCCTTCCAGACTCTTATTTTCCCGTTGAAATTAAAGGGTCATGTAGAGGTTTTATATTCTTGTACCGTCATCCAAACATCTACATATGGAATCCATCTACCGGATCGAAAAGACAAATGCTTATATCTCATTTTAATTCCAAAACATATATTACTCTATATGGTTTTGGTTATGACCAGTCTAGAGATGATTATGTGGTGGTTTTACTGTCCAATAAATGTAATCCATTCTTAGTTGGTGGTTTTACTGTCCAATCACATTTGGAGTTTTTCTCGTTTAGAGACAATACTTGGAAAGAAATCGAGGGTGCTCACTTCCCTTATGTCGTTGATTATGGAGAAGGAGAAGGGGTGGTTTTTAATGGGGCTATTCATTGGTTGGCTTCGCGTCGTGATATAGCTTTGGATGCCATTGTTGGCTTTGATTTAATGGAAAGGAAATTGTTTGATATGCCTCTTCCAAATAATGTTGACCACAGAGCATTAGTACATTCTGGTTTGTGGGTATTTGGAGAATTTCTCAGTATATGGGTTAAGGATACTGATAATGATACAATTGAAATATGGGTGATGAAAGAATACAAAGTGCATTTGTCTTGGACTAAGAATCTTGTTCTTCCTCAGCATTTCATTCCTAGTAACTACTTTAACCCTCTATATTATTCCAGAAATGCGGACTACTTTCACCCTATATATTCTACAGAAAATGGTGATATTATTGGAAAATATGGTGGTACTAGATTGGTGAAGTATAATGACAAAGGACAGTTTTTAGGGCATCGCTCCTTCTGCAACAGTCCATCCGAAGTTGTCGTGTATACCGAGTCGCTACTTTCACTCTCTGGTGACAATGAGCCTGTTTAA

Protein sequence

>MS.gene87559.t1

MDLPQELMIQILLRLPVKSLIFFKCVCKLWFSIISDPHFENSHFQLNLATHTRRFLCISALSPEIRSIDFDAFLNDAPASPNYNCSLPDSYFPVEIKGSCRGFIFLYRHPNIYIWNPSTGSKRQMLISHFNSKTYITLYGFGYDQSRDDYVVVLLSNKCNPFLVGGFTVQSHLEFFSFRDNTWKEIEGAHFPYVVDYGEGEGVVFNGAIHWLASRRDIALDAIVGFDLMERKLFDMPLPNNVDHRALVHSGLWVFGEFLSIWVKDTDNDTIEIWVMKEYKVHLSWTKNLVLPQHFIPSNYFNPLYYSRNADYFHPIYSTENGDIIGKYGGTRLVKYNDKGQFLGHRSFCNSPSEVVVYTESLLSLSGDNEPV