AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034677


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034677.t1 MTR_1g055135 81.132 371 35 3 2 337 5 375 0.0 583
MS.gene034677.t1 MTR_1g055165 54.865 370 82 5 1 337 1 318 1.67e-125 362
MS.gene034677.t1 MTR_5g097210 54.144 362 123 10 7 333 6 359 5.68e-117 343
MS.gene034677.t1 MTR_4g117750 54.223 367 119 9 9 336 2 358 1.61e-105 317
MS.gene034677.t1 MTR_3g103020 51.226 367 134 9 9 337 19 378 7.53e-105 312
MS.gene034677.t1 MTR_5g070130 47.581 372 148 10 9 337 10 377 4.32e-97 293
MS.gene034677.t1 MTR_4g117850 50.413 363 132 13 7 330 20 373 2.23e-95 288
MS.gene034677.t1 MTR_3g034180 46.092 371 153 9 9 336 122 488 2.61e-95 291
MS.gene034677.t1 MTR_3g034160 45.699 372 153 9 9 336 8 374 2.06e-92 280
MS.gene034677.t1 MTR_5g070088 46.015 389 142 11 9 337 6 386 2.76e-92 280
MS.gene034677.t1 MTR_5g070080 45.312 384 149 8 9 337 9 386 7.43e-91 276
MS.gene034677.t1 MTR_3g034130 52.234 291 125 6 9 288 8 295 1.11e-87 268
MS.gene034677.t1 MTR_4g109280 48.087 366 140 13 9 337 7 359 4.51e-87 266
MS.gene034677.t1 MTR_4g023090 43.223 391 141 12 8 336 14 385 1.64e-86 266
MS.gene034677.t1 MTR_1g055195 53.821 301 89 9 74 337 191 478 2.80e-85 265
MS.gene034677.t1 MTR_4g122850 45.404 359 148 10 21 337 12 364 3.60e-84 259
MS.gene034677.t1 MTR_4g023070 44.444 378 148 11 10 336 3 369 4.61e-84 259
MS.gene034677.t1 MTR_4g109270 46.524 374 137 13 10 337 8 364 5.56e-83 256
MS.gene034677.t1 MTR_4g023080 46.070 369 135 11 9 336 8 353 3.51e-82 253
MS.gene034677.t1 MTR_4g023120 44.180 378 151 11 10 337 3 370 1.78e-81 252
MS.gene034677.t1 MTR_4g021785 44.809 366 147 11 9 337 8 355 4.40e-80 248
MS.gene034677.t1 MTR_4g117780 43.700 373 157 10 6 337 7 367 2.35e-79 246
MS.gene034677.t1 MTR_4g116330 43.617 376 162 14 2 337 15 380 8.98e-79 246
MS.gene034677.t1 MTR_4g117770 43.386 378 151 10 6 337 7 367 3.74e-76 238
MS.gene034677.t1 MTR_4g117810 43.386 378 151 10 6 337 7 367 3.74e-76 238
MS.gene034677.t1 MTR_6g060650 45.358 377 150 12 7 336 5 372 8.69e-76 238
MS.gene034677.t1 MTR_4g023380 40.602 399 135 12 8 337 14 379 1.09e-75 238
MS.gene034677.t1 MTR_4g094365 43.666 371 154 12 9 337 7 364 4.06e-75 236
MS.gene034677.t1 MTR_8g433040 42.063 378 156 11 1 337 9 364 3.08e-74 233
MS.gene034677.t1 MTR_8g032380 42.063 378 156 11 1 337 9 364 3.08e-74 233
MS.gene034677.t1 MTR_4g023190 42.932 382 146 13 1 335 1 357 9.75e-73 229
MS.gene034677.t1 MTR_4g023200 42.541 362 131 14 24 335 24 358 3.25e-72 228
MS.gene034677.t1 MTR_4g023150 42.448 384 146 14 1 335 1 358 6.20e-72 227
MS.gene034677.t1 MTR_1g055175 59.585 193 46 2 177 337 9 201 1.95e-71 221
MS.gene034677.t1 MTR_4g118370 51.626 246 66 6 121 334 33 257 2.20e-69 217
MS.gene034677.t1 MTR_8g013010 48.881 268 119 7 9 269 53 309 3.29e-69 219
MS.gene034677.t1 MTR_4g117720 40.909 374 131 13 9 337 50 378 3.33e-66 213
MS.gene034677.t1 MTR_4g023440 40.431 371 126 10 8 337 16 332 2.28e-65 209
MS.gene034677.t1 MTR_4g118380 43.646 362 134 14 7 308 5 356 3.91e-65 210
MS.gene034677.t1 MTR_8g032390 39.785 372 152 11 1 332 31 370 2.68e-62 203
MS.gene034677.t1 MTR_4g023130 39.402 368 120 10 9 336 8 312 1.76e-60 196
MS.gene034677.t1 MTR_1g055250 53.110 209 59 6 140 314 43 246 7.60e-59 192
MS.gene034677.t1 MTR_4g116330 41.399 343 176 15 3 337 16 341 8.15e-57 187
MS.gene034677.t1 MTR_4g121580 43.813 299 128 12 2 285 3 276 1.13e-54 184
MS.gene034677.t1 MTR_2g048580 35.376 359 179 15 9 337 7 342 8.54e-54 180
MS.gene034677.t1 MTR_4g117870 39.799 299 105 9 73 337 10 267 2.08e-52 174
MS.gene034677.t1 MTR_8g433030 37.330 367 135 11 1 332 31 337 1.77e-49 169
MS.gene034677.t1 MTR_4g116340 41.975 243 109 6 2 235 28 247 4.78e-47 159
MS.gene034677.t1 MTR_7g079370 35.882 340 168 10 39 332 16 351 2.90e-45 158
MS.gene034677.t1 MTR_7g079400 36.861 274 131 8 103 337 67 337 3.30e-42 149
MS.gene034677.t1 MTR_7g117720 33.531 337 138 15 9 332 9 272 6.79e-37 134
MS.gene034677.t1 MTR_8g102520 32.143 364 164 11 9 337 7 322 1.18e-36 134
MS.gene034677.t1 MTR_1g055145 70.652 92 27 0 13 104 36 127 1.13e-34 128
MS.gene034677.t1 MTR_1g055145 64.198 81 28 1 205 285 123 202 2.00e-23 98.2
MS.gene034677.t1 MTR_4g118400 37.037 297 114 15 74 331 32 294 4.40e-33 124
MS.gene034677.t1 MTR_4g116320 40.092 217 93 6 151 334 43 255 7.70e-31 117
MS.gene034677.t1 MTR_4g117430 42.262 168 72 4 109 269 3 152 2.18e-30 113
MS.gene034677.t1 MTR_7g079420 32.482 274 107 8 108 337 905 1144 3.90e-30 121
MS.gene034677.t1 MTR_2g021190 33.000 300 158 14 8 286 19 296 6.48e-30 117
MS.gene034677.t1 MTR_4g061340 30.721 319 172 16 6 298 22 317 3.47e-29 115
MS.gene034677.t1 MTR_2g021150 31.594 345 196 19 6 328 10 336 4.47e-29 115
MS.gene034677.t1 MTR_4g109290 45.679 162 54 5 3 160 2 133 1.62e-28 109
MS.gene034677.t1 MTR_5g069120 41.341 179 90 5 20 185 1 177 5.55e-28 107
MS.gene034677.t1 MTR_1g068875 31.186 295 171 10 10 289 4 281 6.26e-28 112
MS.gene034677.t1 MTR_4g055060 29.836 305 177 13 5 289 25 312 9.47e-28 112
MS.gene034677.t1 MTR_3g007430 30.717 293 162 11 13 286 46 316 2.45e-27 110
MS.gene034677.t1 MTR_5g057790 33.445 299 157 14 10 289 46 321 3.22e-27 110
MS.gene034677.t1 MTR_4g133170 30.034 293 170 10 10 286 4 277 3.24e-27 110
MS.gene034677.t1 MTR_1g055200 63.750 80 29 0 106 185 6 85 1.73e-26 101
MS.gene034677.t1 MTR_3g006670 31.373 306 169 14 4 289 43 327 1.75e-26 108
MS.gene034677.t1 MTR_5g057710 33.223 301 159 14 10 290 46 324 1.85e-26 108
MS.gene034677.t1 MTR_1g068835 32.432 296 167 13 10 289 4 282 2.02e-26 108
MS.gene034677.t1 MTR_8g040935 37.619 210 85 8 168 337 5 208 2.25e-26 104
MS.gene034677.t1 MTR_3g009310 31.773 299 160 14 8 286 40 314 5.80e-26 107
MS.gene034677.t1 MTR_6g463430 36.667 210 91 8 162 337 1 202 6.00e-26 103
MS.gene034677.t1 MTR_3g014570 32.492 317 176 16 1 298 20 317 6.07e-26 107
MS.gene034677.t1 MTR_2g028140 30.312 320 171 10 10 289 5 312 9.34e-26 107
MS.gene034677.t1 MTR_2g021210 33.910 289 159 14 8 286 82 348 1.59e-25 106
MS.gene034677.t1 MTR_5g057020 32.313 294 152 14 10 289 46 306 1.87e-25 105
MS.gene034677.t1 MTR_3g007330 29.739 306 182 11 6 298 44 329 1.01e-24 103
MS.gene034677.t1 MTR_2g021155 32.566 304 158 16 5 286 31 309 2.41e-24 104
MS.gene034677.t1 MTR_2g426060 28.981 314 177 11 10 290 6 306 3.48e-24 102
MS.gene034677.t1 MTR_1g097330 31.818 308 173 15 8 299 14 300 6.51e-24 101
MS.gene034677.t1 MTR_4g107820 29.114 316 167 14 10 299 36 320 1.03e-23 100
MS.gene034677.t1 MTR_4g107780 29.114 316 167 14 10 299 36 320 1.03e-23 100
MS.gene034677.t1 MTR_4g107780 29.114 316 167 14 10 299 36 320 1.14e-23 100
MS.gene034677.t1 MTR_2g028130 29.487 312 178 10 10 289 5 306 1.14e-23 100
MS.gene034677.t1 MTR_4g107820 29.114 316 167 14 10 299 36 320 1.15e-23 100
MS.gene034677.t1 MTR_5g022420 27.988 343 196 14 5 326 22 334 1.51e-23 100
MS.gene034677.t1 MTR_5g057690 31.164 292 157 14 10 286 46 308 1.58e-23 100
MS.gene034677.t1 MTR_3g011100 30.721 319 173 16 6 298 231 527 1.60e-23 101
MS.gene034677.t1 MTR_5g007610 32.573 307 158 16 8 286 39 324 1.71e-23 100
MS.gene034677.t1 MTR_1g050542 27.885 312 190 11 5 304 53 341 1.84e-23 100
MS.gene034677.t1 MTR_3g014540 30.492 305 178 13 1 289 20 306 2.07e-23 99.8
MS.gene034677.t1 MTR_4g108820 30.000 300 158 12 7 300 39 292 3.19e-23 98.2
MS.gene034677.t1 MTR_6g065980 28.814 295 174 12 4 289 10 277 4.33e-23 98.6
MS.gene034677.t1 MTR_2g021050 29.739 306 155 11 10 289 5 276 4.34e-23 99.0
MS.gene034677.t1 MTR_3g036290 27.114 343 195 14 6 323 18 330 4.53e-23 98.6
MS.gene034677.t1 MTR_3g007270 28.846 312 170 13 8 289 45 334 5.07e-23 99.4
MS.gene034677.t1 MTR_2g426090 29.642 307 166 13 13 286 9 298 1.06e-22 98.2
MS.gene034677.t1 MTR_3g007360 28.981 314 173 15 13 301 55 343 1.11e-22 98.2
MS.gene034677.t1 MTR_3g007410 29.022 317 169 16 13 301 55 343 1.56e-22 97.8
MS.gene034677.t1 MTR_3g010390 31.646 316 169 19 5 289 27 326 2.34e-22 97.1
MS.gene034677.t1 MTR_3g023930 29.195 298 155 14 8 289 32 289 2.68e-22 96.7
MS.gene034677.t1 MTR_3g009240 31.126 302 166 13 6 289 30 307 2.69e-22 96.7
MS.gene034677.t1 MTR_0115s0020 25.641 390 221 15 10 332 10 397 3.04e-22 96.7
MS.gene034677.t1 MTR_1g054725 28.797 316 183 14 6 298 16 312 3.49e-22 96.3
MS.gene034677.t1 MTR_8g073550 34.536 194 113 7 6 190 26 214 4.04e-22 93.6
MS.gene034677.t1 MTR_3g011060 32.288 319 156 19 5 289 23 315 4.60e-22 96.3
MS.gene034677.t1 MTR_1g094210 27.532 316 178 14 5 300 52 336 5.20e-22 96.3
MS.gene034677.t1 MTR_1g094210 27.532 316 178 14 5 300 52 336 5.77e-22 95.9
MS.gene034677.t1 MTR_5g011200 29.167 312 181 15 6 297 13 304 6.15e-22 95.5
MS.gene034677.t1 MTR_1g068860 28.716 296 180 8 10 289 4 284 7.94e-22 95.5
MS.gene034677.t1 MTR_2g078900 28.213 319 193 13 6 312 29 323 8.85e-22 95.1
MS.gene034677.t1 MTR_2g426070 30.503 318 172 13 1 286 1 301 9.74e-22 95.5
MS.gene034677.t1 MTR_2g028160 29.904 311 174 11 10 286 5 305 1.00e-21 95.5
MS.gene034677.t1 MTR_3g072470 33.579 271 115 11 1 227 1 250 1.03e-21 95.5
MS.gene034677.t1 MTR_2g025420 28.889 315 176 10 10 286 6 310 1.08e-21 95.5
MS.gene034677.t1 MTR_3g009260 32.095 296 161 15 7 286 35 306 1.38e-21 94.7
MS.gene034677.t1 MTR_8g467140 31.086 267 146 13 9 259 31 275 2.54e-21 93.2
MS.gene034677.t1 MTR_3g010920 30.208 288 161 15 8 286 42 298 2.99e-21 94.0
MS.gene034677.t1 MTR_2g029990 30.844 308 170 16 11 297 52 337 3.65e-21 94.0
MS.gene034677.t1 MTR_2g031680 26.557 305 172 9 10 289 6 283 3.94e-21 93.6
MS.gene034677.t1 MTR_7g056760 32.389 247 134 8 1 222 14 252 5.15e-21 93.2
MS.gene034677.t1 MTR_0667s0010 28.526 312 171 12 10 289 6 297 7.98e-21 92.8
MS.gene034677.t1 MTR_7g407070 31.420 331 185 20 5 304 26 345 8.75e-21 92.8
MS.gene034677.t1 MTR_2g426020 28.664 307 172 13 10 286 6 295 9.69e-21 92.4
MS.gene034677.t1 MTR_2g046900 29.293 297 181 10 8 288 26 309 1.07e-20 92.4
MS.gene034677.t1 MTR_7g057270 29.619 341 184 13 10 310 26 350 1.12e-20 92.4
MS.gene034677.t1 MTR_2g028110 29.499 339 179 18 10 315 4 315 1.27e-20 92.0
MS.gene034677.t1 MTR_2g024110 28.846 312 181 12 10 300 4 295 1.44e-20 91.7
MS.gene034677.t1 MTR_7g056003 34.008 247 115 10 12 230 17 243 1.63e-20 92.0
MS.gene034677.t1 MTR_0064s0160 27.010 311 189 12 9 286 41 346 1.69e-20 92.0
MS.gene034677.t1 MTR_4g070550 28.481 316 176 11 10 289 5 306 1.96e-20 91.7
MS.gene034677.t1 MTR_4g031770 29.114 316 189 14 10 309 4 300 2.05e-20 91.3
MS.gene034677.t1 MTR_1g097560 29.836 305 156 17 6 288 32 300 2.07e-20 91.3
MS.gene034677.t1 MTR_7g056290 28.249 354 185 14 1 300 1 339 2.37e-20 91.7
MS.gene034677.t1 MTR_3g010590 28.328 293 172 13 6 286 32 298 2.56e-20 91.3
MS.gene034677.t1 MTR_3g013740 30.650 323 174 17 10 301 44 347 2.97e-20 91.3
MS.gene034677.t1 MTR_8g101580 27.181 298 186 12 5 288 40 320 3.23e-20 90.9
MS.gene034677.t1 MTR_1g097490 30.539 334 197 16 10 330 49 360 3.27e-20 90.9
MS.gene034677.t1 MTR_4g023430 51.648 91 43 1 1 90 32 122 5.12e-20 87.4
MS.gene034677.t1 MTR_2g031720 27.575 301 181 10 10 289 6 290 8.07e-20 89.7
MS.gene034677.t1 MTR_3g010430 28.808 302 177 12 6 289 32 313 8.41e-20 90.1
MS.gene034677.t1 MTR_1g114700 32.673 303 160 18 6 286 25 305 1.05e-19 89.4
MS.gene034677.t1 MTR_3g436150 33.550 307 163 18 6 286 28 319 1.08e-19 89.4
MS.gene034677.t1 MTR_3g011650 33.478 230 123 9 7 224 73 284 1.18e-19 87.8
MS.gene034677.t1 MTR_4g024890 27.206 272 172 8 1 254 1 264 1.32e-19 89.0
MS.gene034677.t1 MTR_5g048160 26.603 312 190 13 10 286 4 311 1.86e-19 88.6
MS.gene034677.t1 MTR_6g021880 27.607 326 189 14 21 311 31 344 2.14e-19 88.6
MS.gene034677.t1 MTR_5g057040 35.938 192 104 8 10 190 46 229 2.25e-19 89.7
MS.gene034677.t1 MTR_5g057643 35.417 192 105 7 10 190 46 229 2.50e-19 86.7
MS.gene034677.t1 MTR_2g021252 30.035 283 165 11 13 286 50 308 2.55e-19 88.2
MS.gene034677.t1 MTR_7g066000 29.193 322 195 16 6 300 21 336 2.85e-19 88.2
MS.gene034677.t1 MTR_0760s0010 29.537 281 167 12 15 286 52 310 3.24e-19 88.2
MS.gene034677.t1 MTR_8g062660 25.594 379 205 16 1 330 13 363 3.47e-19 89.0
MS.gene034677.t1 MTR_3g010520 28.231 294 164 12 8 289 23 281 3.64e-19 87.4
MS.gene034677.t1 MTR_5g069930 31.489 235 126 9 9 223 5 224 3.76e-19 87.8
MS.gene034677.t1 MTR_1g088120 28.395 243 147 8 1 224 1 235 3.81e-19 88.2
MS.gene034677.t1 MTR_7g056390 27.933 358 177 14 1 300 1 335 4.23e-19 87.8
MS.gene034677.t1 MTR_2g046830 28.990 307 185 14 8 299 23 311 4.27e-19 87.8
MS.gene034677.t1 MTR_1g055070 28.374 289 168 11 5 264 44 322 5.90e-19 87.4
MS.gene034677.t1 MTR_0044s0300 27.937 315 183 16 8 302 36 326 8.10e-19 87.0
MS.gene034677.t1 MTR_7g028660 28.319 339 170 12 7 300 8 318 1.01e-18 86.7
MS.gene034677.t1 MTR_5g046260 28.947 342 177 17 8 329 2 297 1.17e-18 85.1
MS.gene034677.t1 MTR_2g024100 29.967 307 161 11 17 289 15 301 1.36e-18 86.3
MS.gene034677.t1 MTR_3g083010 28.485 330 183 12 10 299 6 322 1.57e-18 86.3
MS.gene034677.t1 MTR_7g060940 31.579 228 124 6 7 223 19 225 1.61e-18 85.9
MS.gene034677.t1 MTR_4g030980 30.075 266 132 9 10 229 15 272 1.75e-18 86.3
MS.gene034677.t1 MTR_4g129190 31.950 241 116 11 10 226 6 222 1.78e-18 85.9
MS.gene034677.t1 MTR_7g055977 33.613 238 124 11 9 230 6 225 2.30e-18 85.5
MS.gene034677.t1 MTR_3g013770 29.836 305 170 14 8 289 31 314 2.36e-18 85.5
MS.gene034677.t1 MTR_1g056710 28.319 339 189 13 6 317 30 341 2.47e-18 85.5
MS.gene034677.t1 MTR_3g009250 33.478 230 122 10 7 224 35 245 2.55e-18 83.2
MS.gene034677.t1 MTR_0242s0060 29.060 351 191 15 7 315 6 340 2.57e-18 85.5
MS.gene034677.t1 MTR_0242s0040 29.060 351 191 15 7 315 6 340 2.57e-18 85.5
MS.gene034677.t1 MTR_3g036430 28.421 285 155 14 8 285 18 260 2.77e-18 84.7
MS.gene034677.t1 MTR_3g024110 26.144 306 190 12 3 291 94 380 3.11e-18 85.5
MS.gene034677.t1 MTR_6g027910 30.921 304 163 15 13 286 12 298 3.97e-18 84.7
MS.gene034677.t1 MTR_3g030250 27.129 317 175 17 8 302 35 317 4.02e-18 84.7
MS.gene034677.t1 MTR_7g070880 28.060 335 177 10 7 289 18 340 4.60e-18 85.1
MS.gene034677.t1 MTR_7g070830 27.859 341 170 11 7 289 18 340 5.25e-18 84.7
MS.gene034677.t1 MTR_2g046920 26.689 296 182 9 8 288 22 297 5.31e-18 84.3
MS.gene034677.t1 MTR_0128s0020 29.538 325 184 15 6 300 14 323 5.39e-18 84.3
MS.gene034677.t1 MTR_4g013180 28.049 328 184 15 9 300 10 321 6.61e-18 84.7
MS.gene034677.t1 MTR_7g066850 27.143 350 190 19 6 314 19 344 8.50e-18 84.3
MS.gene034677.t1 MTR_8g099460 29.221 308 170 13 10 289 5 292 1.23e-17 83.6
MS.gene034677.t1 MTR_7g070440 28.840 319 171 16 4 289 1 296 1.27e-17 83.2
MS.gene034677.t1 MTR_2g078850 28.990 307 182 13 13 302 33 320 1.38e-17 83.2
MS.gene034677.t1 MTR_7g060960 35.268 224 99 12 7 224 29 212 1.43e-17 83.2
MS.gene034677.t1 MTR_5g008530 70.690 58 15 1 10 67 18 73 1.58e-17 76.3
MS.gene034677.t1 MTR_4g080200 28.996 269 141 10 10 251 3 248 1.62e-17 82.8
MS.gene034677.t1 MTR_7g013590 29.841 315 173 14 13 302 39 330 1.84e-17 83.2
MS.gene034677.t1 MTR_7g078040 30.133 375 199 16 7 330 6 368 1.85e-17 83.2
MS.gene034677.t1 MTR_2g026010 28.188 298 183 10 10 289 4 288 2.08e-17 82.8
MS.gene034677.t1 MTR_6g053260 28.213 319 186 17 8 304 335 632 2.37e-17 83.6
MS.gene034677.t1 MTR_6g053240 26.875 320 198 11 6 304 24 328 2.51e-17 82.8
MS.gene034677.t1 MTR_1g054575 27.097 310 181 15 5 296 47 329 2.66e-17 83.2
MS.gene034677.t1 MTR_2g425980 30.159 315 163 13 10 286 5 300 2.94e-17 82.4
MS.gene034677.t1 MTR_2g055970 28.283 297 184 13 9 298 210 484 3.04e-17 82.8
MS.gene034677.t1 MTR_6g004660 29.773 309 166 15 10 282 16 309 4.03e-17 82.0
MS.gene034677.t1 MTR_4g114700 46.281 121 55 6 109 223 9 125 4.42e-17 79.7
MS.gene034677.t1 MTR_5g023570 40.678 118 60 6 5 121 32 140 4.63e-17 77.4
MS.gene034677.t1 MTR_5g046300 29.739 306 158 16 8 289 2 274 4.64e-17 81.3
MS.gene034677.t1 MTR_5g046290 29.739 306 158 16 8 289 2 274 4.64e-17 81.3
MS.gene034677.t1 MTR_5g069760 28.821 229 135 6 9 223 5 219 5.83e-17 81.3
MS.gene034677.t1 MTR_3g011020 29.412 323 167 19 5 301 23 310 9.31e-17 80.9
MS.gene034677.t1 MTR_7g078860 30.672 238 129 8 9 223 8 232 9.32e-17 80.9
MS.gene034677.t1 MTR_7g007300 30.341 323 166 16 6 304 97 384 9.81e-17 81.3
MS.gene034677.t1 MTR_5g097680 26.554 354 190 13 9 296 16 365 1.24e-16 80.9
MS.gene034677.t1 MTR_3g030330 29.110 292 169 14 8 286 18 284 1.30e-16 80.1
MS.gene034677.t1 MTR_1g061330 23.986 296 190 12 10 286 4 283 1.58e-16 80.1
MS.gene034677.t1 MTR_1g115160 26.821 302 198 12 7 302 19 303 1.62e-16 80.1
MS.gene034677.t1 MTR_3g010870 29.097 299 166 14 6 286 33 303 1.72e-16 80.1
MS.gene034677.t1 MTR_4g030830 31.169 231 131 8 10 224 9 227 1.80e-16 80.1
MS.gene034677.t1 MTR_7g077970 30.218 321 177 12 8 289 5 317 1.81e-16 80.1
MS.gene034677.t1 MTR_6g017280 27.666 347 177 22 10 310 9 327 2.31e-16 79.7
MS.gene034677.t1 MTR_3g096250 34.884 172 89 7 8 164 45 208 2.51e-16 79.3
MS.gene034677.t1 MTR_2g461450 29.167 288 177 8 10 289 18 286 2.80e-16 79.3
MS.gene034677.t1 MTR_3g058480 27.083 288 159 11 8 265 37 303 3.15e-16 79.0
MS.gene034677.t1 MTR_3g007300 28.383 303 164 15 6 298 45 304 3.30e-16 79.0
MS.gene034677.t1 MTR_3g083640 26.299 308 170 15 6 289 51 325 3.76e-16 79.3
MS.gene034677.t1 MTR_0464s0020 28.994 338 180 16 10 300 23 347 4.42e-16 79.0
MS.gene034677.t1 MTR_1g071010 28.571 238 136 10 8 226 13 235 5.77e-16 78.6
MS.gene034677.t1 MTR_7g056797 31.197 234 141 6 6 222 19 249 6.74e-16 78.6
MS.gene034677.t1 MTR_4g033495 31.897 232 116 12 7 210 24 241 6.93e-16 78.6
MS.gene034677.t1 MTR_0128s0070 29.221 308 176 12 6 286 18 310 7.54e-16 78.2
MS.gene034677.t1 MTR_3g010620 27.000 300 171 15 6 289 29 296 7.85e-16 78.2
MS.gene034677.t1 MTR_3g006570 27.303 304 171 10 6 286 17 293 9.04e-16 77.8
MS.gene034677.t1 MTR_3g024040 27.083 288 187 10 16 298 37 306 9.24e-16 77.8
MS.gene034677.t1 MTR_2g043400 34.016 244 124 8 10 230 23 252 9.25e-16 78.2
MS.gene034677.t1 MTR_2g046800 27.035 344 180 15 6 300 10 331 1.15e-15 77.8
MS.gene034677.t1 MTR_3g437520 33.068 251 118 12 10 224 23 259 1.19e-15 77.8
MS.gene034677.t1 MTR_6g048120 27.597 308 177 12 5 286 31 318 1.19e-15 77.8
MS.gene034677.t1 MTR_5g009060 29.394 330 160 18 8 286 23 330 1.21e-15 77.8
MS.gene034677.t1 MTR_6g013270 26.667 300 187 12 4 286 23 306 1.29e-15 77.4
MS.gene034677.t1 MTR_4g013185 27.479 353 191 14 1 300 1 341 1.29e-15 77.8
MS.gene034677.t1 MTR_6g017270 29.952 207 118 8 4 190 3 202 1.35e-15 77.0
MS.gene034677.t1 MTR_7g067680 36.111 144 76 6 5 135 43 183 1.37e-15 77.4
MS.gene034677.t1 MTR_3g036335 28.053 303 179 16 5 289 36 317 1.41e-15 77.4
MS.gene034677.t1 MTR_3g006500 27.451 306 176 11 1 286 9 288 1.68e-15 77.0
MS.gene034677.t1 MTR_6g080680 27.740 292 153 11 9 262 18 289 2.28e-15 76.6
MS.gene034677.t1 MTR_7g022670 27.389 314 136 12 1 286 14 263 2.39e-15 76.3
MS.gene034677.t1 MTR_6g048140 29.254 335 173 16 5 305 32 336 2.66e-15 76.6
MS.gene034677.t1 MTR_7g056820 27.554 323 184 16 8 298 5 309 3.12e-15 76.3
MS.gene034677.t1 MTR_3g006530 27.090 299 178 11 8 286 38 316 3.12e-15 76.3
MS.gene034677.t1 MTR_2g047832 26.748 329 198 14 8 306 27 342 3.52e-15 76.3
MS.gene034677.t1 MTR_1g442850 29.052 327 172 17 9 298 4 307 3.64e-15 76.3
MS.gene034677.t1 MTR_7g062060 26.627 338 190 15 9 300 11 336 3.90e-15 76.3
MS.gene034677.t1 MTR_4g031020 27.405 343 172 13 10 283 15 349 4.00e-15 76.3
MS.gene034677.t1 MTR_3g030310 26.159 302 178 14 8 286 19 298 5.26e-15 75.9
MS.gene034677.t1 MTR_1g055375 27.160 324 181 16 13 305 7 306 5.53e-15 75.5
MS.gene034677.t1 MTR_7g055870 30.116 259 124 12 10 224 13 258 6.77e-15 75.5
MS.gene034677.t1 MTR_7g062100 27.744 328 180 14 10 302 24 329 6.92e-15 75.5
MS.gene034677.t1 MTR_7g061060 25.513 341 193 13 9 311 12 329 7.59e-15 75.1
MS.gene034677.t1 MTR_6g034720 42.718 103 55 1 146 248 73 171 7.89e-15 72.8
MS.gene034677.t1 MTR_7g056200 27.019 322 169 11 9 298 22 309 9.02e-15 75.1
MS.gene034677.t1 MTR_5g094350 25.784 287 143 12 9 250 12 273 9.08e-15 73.9
MS.gene034677.t1 MTR_7g078840 27.273 363 185 16 1 300 1 347 1.10e-14 75.1
MS.gene034677.t1 MTR_7g055930 30.116 259 124 12 10 224 13 258 1.18e-14 74.7
MS.gene034677.t1 MTR_2g047892 26.471 340 199 14 7 312 19 341 1.20e-14 74.7
MS.gene034677.t1 MTR_4g013175 28.611 360 178 14 1 300 1 341 1.26e-14 74.7
MS.gene034677.t1 MTR_3g010970 28.028 289 162 12 13 286 51 308 1.35e-14 74.3
MS.gene034677.t1 MTR_7g061050 24.706 340 196 13 9 312 12 327 1.40e-14 74.3
MS.gene034677.t1 MTR_0128s0010 28.939 311 177 16 5 286 16 311 1.45e-14 74.3
MS.gene034677.t1 MTR_7g066100 28.446 341 188 15 4 300 1 329 1.49e-14 74.3
MS.gene034677.t1 MTR_1g115185 26.403 303 174 12 8 286 37 314 1.52e-14 74.3
MS.gene034677.t1 MTR_6g090180 25.538 325 192 11 9 289 46 364 1.66e-14 74.3
MS.gene034677.t1 MTR_4g011660 27.844 334 170 15 6 286 15 330 1.68e-14 74.3
MS.gene034677.t1 MTR_7g077070 25.352 355 203 14 10 312 16 360 1.81e-14 74.3
MS.gene034677.t1 MTR_5g096710 30.116 259 141 11 6 237 19 264 1.85e-14 73.9
MS.gene034677.t1 MTR_4g122860 29.319 191 73 6 181 336 156 319 2.31e-14 73.6
MS.gene034677.t1 MTR_4g122860 50.633 79 36 2 8 85 68 144 9.66e-11 62.4
MS.gene034677.t1 MTR_3g058470 29.614 233 131 8 8 216 35 258 2.38e-14 73.6
MS.gene034677.t1 MTR_7g052150 33.333 210 95 8 7 192 19 207 2.43e-14 73.9
MS.gene034677.t1 MTR_6g007135 26.364 330 194 16 10 312 26 333 2.54e-14 73.6
MS.gene034677.t1 MTR_5g096900 28.197 305 152 16 9 275 11 286 2.66e-14 73.2
MS.gene034677.t1 MTR_3g011120 27.241 290 165 13 9 269 13 285 3.11e-14 73.2
MS.gene034677.t1 MTR_3g024150 26.897 290 173 14 13 286 38 304 3.12e-14 73.2
MS.gene034677.t1 MTR_1g055055 24.916 297 180 10 10 294 26 291 3.45e-14 72.8
MS.gene034677.t1 MTR_1g112930 25.552 317 189 13 7 304 22 310 3.52e-14 73.2
MS.gene034677.t1 MTR_7g055987 33.054 239 112 13 6 224 16 226 3.86e-14 72.8
MS.gene034677.t1 MTR_4g030090 28.767 292 160 14 1 266 1 270 4.00e-14 73.2
MS.gene034677.t1 MTR_2g021950 25.418 299 169 14 9 269 15 297 4.32e-14 72.8
MS.gene034677.t1 MTR_5g043605 26.692 266 145 9 9 269 24 244 5.27e-14 72.4
MS.gene034677.t1 MTR_3g058440 29.412 255 141 12 5 237 28 265 5.46e-14 72.0
MS.gene034677.t1 MTR_7g078900 28.090 267 141 10 1 232 3 253 5.76e-14 72.8
MS.gene034677.t1 MTR_6g461660 26.207 290 164 12 9 261 18 294 5.89e-14 72.8
MS.gene034677.t1 MTR_7g022600 27.928 333 181 15 1 286 14 334 6.12e-14 72.8
MS.gene034677.t1 MTR_7g056170 29.213 267 126 10 9 226 74 326 6.52e-14 72.8
MS.gene034677.t1 MTR_2g038680 26.061 330 185 11 10 289 16 336 7.38e-14 72.4
MS.gene034677.t1 MTR_7g050520 30.672 238 120 11 6 224 18 229 7.47e-14 72.4
MS.gene034677.t1 MTR_7g050480 31.092 238 119 11 6 224 18 229 7.54e-14 72.4
MS.gene034677.t1 MTR_4g117550 25.566 309 183 12 9 279 16 315 8.03e-14 72.0
MS.gene034677.t1 MTR_3g030240 25.490 357 185 18 6 323 33 347 9.40e-14 72.0
MS.gene034677.t1 MTR_5g068040 30.224 268 136 13 7 249 13 254 1.10e-13 71.6
MS.gene034677.t1 MTR_8g046200 25.364 343 184 11 9 289 15 347 1.11e-13 72.0
MS.gene034677.t1 MTR_2g021770 29.085 306 160 16 13 269 15 312 1.26e-13 71.6
MS.gene034677.t1 MTR_2g104340 23.571 280 176 7 1 251 5 275 1.27e-13 71.6
MS.gene034677.t1 MTR_2g034700 26.471 272 145 9 9 247 13 262 1.32e-13 71.2
MS.gene034677.t1 MTR_1g068905 33.544 158 86 5 10 157 4 152 1.67e-13 70.5
MS.gene034677.t1 MTR_3g030350 27.759 299 183 13 1 286 26 304 1.70e-13 71.2
MS.gene034677.t1 MTR_6g055210 28.968 252 140 10 8 236 20 255 2.11e-13 71.2
MS.gene034677.t1 MTR_2g043410 30.328 244 122 6 10 224 22 246 2.14e-13 70.9
MS.gene034677.t1 MTR_5g022750 27.362 307 178 12 10 296 39 320 2.49e-13 70.9
MS.gene034677.t1 MTR_4g037465 29.573 328 173 16 7 298 18 323 2.65e-13 70.5
MS.gene034677.t1 MTR_2g025960 27.907 215 113 8 102 286 1 203 3.17e-13 69.7
MS.gene034677.t1 MTR_7g056260 26.875 320 164 13 10 282 14 310 3.30e-13 69.7
MS.gene034677.t1 MTR_3g010440 34.091 132 68 5 6 126 22 145 3.32e-13 70.1
MS.gene034677.t1 MTR_7g061010 30.638 235 121 9 7 224 19 228 5.33e-13 69.7
MS.gene034677.t1 MTR_7g078050 31.795 195 104 7 7 190 3 179 5.73e-13 68.2
MS.gene034677.t1 MTR_3g007380 36.029 136 74 4 13 142 33 161 6.09e-13 67.8
MS.gene034677.t1 MTR_7g061090 29.218 243 129 11 9 223 21 248 6.51e-13 69.3
MS.gene034677.t1 MTR_7g056737 26.667 345 191 15 4 315 16 331 6.57e-13 69.3
MS.gene034677.t1 MTR_2g031700 25.105 239 149 8 10 237 6 225 6.98e-13 68.6
MS.gene034677.t1 MTR_2g033410 28.378 296 168 13 11 286 10 281 8.29e-13 68.9
MS.gene034677.t1 MTR_6g086825 26.389 288 156 12 9 252 69 344 8.96e-13 69.3
MS.gene034677.t1 MTR_7g091630 29.832 238 136 12 5 222 27 253 9.05e-13 69.3
MS.gene034677.t1 MTR_5g043160 25.745 369 207 19 12 322 52 411 1.36e-12 68.6
MS.gene034677.t1 MTR_4g030110 28.114 281 156 12 1 248 21 288 1.40e-12 68.6
MS.gene034677.t1 MTR_4g129160 26.254 339 194 15 10 302 7 335 1.46e-12 68.2
MS.gene034677.t1 MTR_7g035295 33.714 175 88 7 10 160 16 186 1.48e-12 68.2
MS.gene034677.t1 MTR_5g069390 28.315 279 153 12 9 248 25 295 1.62e-12 68.6
MS.gene034677.t1 MTR_2g021800 25.828 302 152 12 9 252 15 302 1.80e-12 68.2
MS.gene034677.t1 MTR_4g014370 23.248 314 179 13 9 269 10 314 2.08e-12 67.8
MS.gene034677.t1 MTR_4g055820 26.619 278 161 12 9 251 13 282 2.22e-12 67.8
MS.gene034677.t1 MTR_3g464470 28.807 243 133 9 7 230 4 225 2.29e-12 67.8
MS.gene034677.t1 MTR_2g022170 37.984 129 63 5 13 137 7 122 2.30e-12 63.9
MS.gene034677.t1 MTR_3g013950 28.049 328 176 14 13 298 9 318 2.51e-12 67.8
MS.gene034677.t1 MTR_4g028680 27.545 334 183 20 9 296 15 335 2.52e-12 67.8
MS.gene034677.t1 MTR_8g066440 28.870 239 136 9 8 223 21 248 2.66e-12 67.8
MS.gene034677.t1 MTR_0267s0050 26.471 340 180 14 13 305 9 325 3.08e-12 67.4
MS.gene034677.t1 MTR_7g055850 31.696 224 103 10 10 192 13 227 3.63e-12 66.2
MS.gene034677.t1 MTR_3g010870 28.634 227 129 9 6 220 33 238 4.02e-12 66.6
MS.gene034677.t1 MTR_7g037670 27.823 248 129 9 10 237 23 240 4.05e-12 66.6
MS.gene034677.t1 MTR_7g050490 31.841 201 105 9 6 190 4 188 4.10e-12 64.7
MS.gene034677.t1 MTR_0134s0060 23.649 296 164 12 9 252 11 296 4.44e-12 67.0
MS.gene034677.t1 MTR_7g056710 27.711 332 177 17 4 300 12 315 4.49e-12 67.0
MS.gene034677.t1 MTR_5g096910 26.441 295 169 13 9 269 16 296 4.76e-12 66.6
MS.gene034677.t1 MTR_2g006360 27.679 336 173 19 13 336 49 326 5.21e-12 66.6
MS.gene034677.t1 MTR_6g478230 25.271 277 154 11 9 252 26 282 7.44e-12 66.2
MS.gene034677.t1 MTR_2g066200 23.891 293 182 10 9 271 11 292 8.49e-12 65.9
MS.gene034677.t1 MTR_8g012090 23.077 286 163 9 2 264 8 259 1.26e-11 65.1
MS.gene034677.t1 MTR_7g061100 30.631 222 102 10 9 223 12 188 1.42e-11 65.1
MS.gene034677.t1 MTR_6g016285 25.826 333 192 13 7 299 18 335 1.72e-11 65.5
MS.gene034677.t1 MTR_4g024870 28.017 232 147 7 11 230 45 268 1.77e-11 65.1
MS.gene034677.t1 MTR_6g079810 25.850 294 161 14 9 258 69 349 1.94e-11 65.1
MS.gene034677.t1 MTR_4g030760 28.000 200 128 5 10 200 73 265 1.96e-11 65.1
MS.gene034677.t1 MTR_5g056020 26.549 339 194 15 8 299 15 345 2.55e-11 64.7
MS.gene034677.t1 MTR_3g464500 26.220 328 185 12 9 300 26 332 2.58e-11 64.7
MS.gene034677.t1 MTR_7g017130 24.916 297 174 12 10 269 18 302 2.94e-11 64.3
MS.gene034677.t1 MTR_7g017170 24.916 297 174 12 10 269 18 302 3.06e-11 64.3
MS.gene034677.t1 MTR_8g046310 26.821 302 187 13 9 289 15 303 3.83e-11 63.9
MS.gene034677.t1 MTR_2g022000 24.830 294 166 12 9 253 15 302 4.27e-11 63.9
MS.gene034677.t1 MTR_7g056717 28.070 342 190 17 4 315 16 331 4.40e-11 63.9
MS.gene034677.t1 MTR_6g004210 26.537 309 169 13 21 282 36 333 4.47e-11 63.9
MS.gene034677.t1 MTR_3g023940 31.447 159 99 5 8 157 32 189 4.86e-11 63.5
MS.gene034677.t1 MTR_1g037540 27.059 255 140 9 10 222 5 255 4.97e-11 63.9
MS.gene034677.t1 MTR_3g006300 62.791 43 16 0 8 50 28 70 5.54e-11 58.9
MS.gene034677.t1 MTR_7g069550 26.667 285 159 12 1 248 5 276 6.74e-11 63.2
MS.gene034677.t1 MTR_2g437110 26.269 335 192 17 1 298 10 326 8.66e-11 63.2
MS.gene034677.t1 MTR_4g019990 29.004 231 141 7 9 224 5 227 8.78e-11 62.8
MS.gene034677.t1 MTR_7g079160 26.257 358 186 15 9 300 7 352 8.78e-11 63.2
MS.gene034677.t1 MTR_1g015740 28.571 231 113 9 7 228 5 192 9.19e-11 62.4
MS.gene034677.t1 MTR_2g078870 26.378 254 156 12 55 297 2 235 9.34e-11 62.4
MS.gene034677.t1 MTR_5g027370 21.452 303 198 10 14 288 33 323 9.57e-11 63.2
MS.gene034677.t1 MTR_2g047200 24.633 341 202 14 7 310 17 339 9.84e-11 62.8
MS.gene034677.t1 MTR_5g027330 21.452 303 198 10 14 288 44 334 9.86e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034677.t1 AT3G23880 29.766 299 179 9 3 286 7 289 7.43e-25 103
MS.gene034677.t1 AT4G12560 30.492 305 173 13 10 289 4 294 1.82e-24 103
MS.gene034677.t1 AT4G12560 30.492 305 173 13 10 289 4 294 1.82e-24 103
MS.gene034677.t1 AT4G12560 30.492 305 173 13 10 289 4 294 1.82e-24 103
MS.gene034677.t1 AT3G06240 28.659 328 166 15 10 286 36 346 2.23e-21 94.7
MS.gene034677.t1 AT5G49610 29.293 297 168 13 11 289 10 282 3.37e-17 82.0
MS.gene034677.t1 AT1G33530 29.242 277 148 13 10 274 97 337 2.16e-16 80.1
MS.gene034677.t1 AT1G30790 23.734 316 200 10 9 293 8 313 4.32e-16 79.0
MS.gene034677.t1 AT4G22390 25.926 297 187 12 11 287 5 288 1.33e-15 77.4
MS.gene034677.t1 AT4G22390 25.926 297 187 12 11 287 5 288 1.53e-15 77.4
MS.gene034677.t1 AT3G16590 26.351 296 180 12 7 284 2 277 1.74e-15 77.0
MS.gene034677.t1 AT3G07870 26.159 302 191 9 10 289 28 319 4.20e-15 76.3
MS.gene034677.t1 AT1G12870 23.052 308 191 12 10 290 33 321 1.71e-14 74.3
MS.gene034677.t1 AT1G47790 23.948 309 197 11 3 292 18 307 5.56e-14 72.8
MS.gene034677.t1 AT2G40925 26.266 316 182 14 10 296 27 320 6.39e-14 72.4
MS.gene034677.t1 AT4G21240 27.458 295 182 12 10 286 36 316 8.84e-14 72.0
MS.gene034677.t1 AT3G21120 23.077 299 192 11 9 285 2 284 2.47e-13 70.5
MS.gene034677.t1 AT3G08750 29.534 193 111 6 8 192 10 185 2.74e-13 70.5
MS.gene034677.t1 AT3G17710 26.132 287 182 11 10 284 6 274 7.06e-13 69.3
MS.gene034677.t1 AT2G43445 24.686 239 151 6 9 245 12 223 7.36e-13 69.3
MS.gene034677.t1 AT3G16210 28.163 245 145 11 9 248 4 222 7.87e-13 68.9
MS.gene034677.t1 AT3G10430 28.444 225 132 11 10 224 5 210 2.07e-12 67.8
MS.gene034677.t1 AT2G43440 27.984 243 140 9 9 245 12 225 6.59e-12 66.6
MS.gene034677.t1 AT3G17490 26.667 300 171 13 8 285 4 276 1.20e-11 65.5
MS.gene034677.t1 AT3G10240 23.669 338 211 14 10 328 27 336 1.26e-11 65.5
MS.gene034677.t1 AT3G17480 27.152 151 103 3 6 151 8 156 1.39e-11 65.5
MS.gene034677.t1 AT1G51290 24.749 299 159 13 10 284 6 262 2.62e-11 64.7
MS.gene034677.t1 AT4G04690 25.847 236 139 10 10 235 11 220 3.56e-11 64.3
MS.gene034677.t1 AT3G52320 26.804 291 177 12 8 277 25 300 4.24e-11 63.9

Find 71 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGCCTTTCATTTAA+TGG 0.113478 1.4:+46413611 MS.gene034677:CDS
GTTCGACAGATTGTAATTTA+TGG 0.146258 1.4:+46413679 MS.gene034677:CDS
CATTTCGATCTTAAAGTTAT+AGG 0.185952 1.4:+46413213 MS.gene034677:CDS
TATTGTAAAGATTCAGAAAA+TGG 0.209052 1.4:+46413941 MS.gene034677:CDS
TGGTAACCTTAATAAGATTT+TGG 0.210360 1.4:-46412965 None:intergenic
ATTTCTCAGTCTATGGGTTT+TGG 0.213090 1.4:+46413713 MS.gene034677:CDS
ACTTGGATAAAGTTGATATA+TGG 0.215529 1.4:+46413739 MS.gene034677:CDS
CGTTTAAATTTCTATAGTTT+TGG 0.238492 1.4:+46413342 MS.gene034677:CDS
TGATCACCAAAATCTTATTA+AGG 0.243263 1.4:+46412959 MS.gene034677:CDS
GATTTAGGAAGATCAAAATT+AGG 0.243291 1.4:-46413189 None:intergenic
TTAAGATCGAAATGAGATTT+AGG 0.251030 1.4:-46413204 None:intergenic
AAATTTAAACGTGAATAATT+AGG 0.271228 1.4:-46413330 None:intergenic
TTAGAGGATTTCTCAGTCTA+TGG 0.277856 1.4:+46413706 MS.gene034677:CDS
TTAATGGAAAGGATACTTCT+AGG 0.298109 1.4:+46413627 MS.gene034677:CDS
TTCGACAGATTGTAATTTAT+GGG 0.302194 1.4:+46413680 MS.gene034677:CDS
CTCCCGGATGATATTGAATA+TGG 0.311329 1.4:+46413657 MS.gene034677:CDS
AAAGCTATAGATCGAAATTC+AGG 0.341944 1.4:-46413123 None:intergenic
GGATAAAGCTCACTGTAAAA+AGG 0.349147 1.4:-46413507 None:intergenic
ATTTAGGAAGATCAAAATTA+GGG 0.357603 1.4:-46413188 None:intergenic
TTAAGCTTGCTCAGTGTCAC+TGG 0.358415 1.4:-46414005 None:intergenic
CGTAGAATTCTCTTCATAAC+AGG 0.358753 1.4:+46413096 MS.gene034677:CDS
TGTAATTTATGGGTATTTAG+AGG 0.380678 1.4:+46413690 MS.gene034677:CDS
GTGGTAGAGTCCGTCTTCAA+TGG 0.384732 1.4:+46413543 MS.gene034677:CDS
TGGTAGAGTCCGTCTTCAAT+GGG 0.385463 1.4:+46413544 MS.gene034677:CDS
AAACGAATAAGAGACTTAAC+TGG 0.393097 1.4:-46412985 None:intergenic
CGGAAGATGCATGGCGGAGG+TGG 0.409563 1.4:+46412909 None:intergenic
GATAGCACATCATCTGAGTT+TGG 0.409606 1.4:-46413420 None:intergenic
CAGATGGATGTACTGGATAT+TGG 0.417300 1.4:+46413877 MS.gene034677:intron
AAAGATTCAGAAAATGGATT+CGG 0.424007 1.4:+46413947 MS.gene034677:CDS
TCTTCAATGGGGCTATTCAC+TGG 0.429378 1.4:+46413556 MS.gene034677:CDS
TACAATAATCGTTATGCTCT+AGG 0.448234 1.4:-46413925 None:intergenic
CTTGGATAAAGTTGATATAT+GGG 0.451265 1.4:+46413740 MS.gene034677:CDS
CTGAGTTTGGAATACAATCA+TGG 0.451583 1.4:-46413407 None:intergenic
TCAAATCAGTTTGTAAGTCA+TGG 0.474541 1.4:+46413007 MS.gene034677:CDS
GAACCATATTCAATATCATC+CGG 0.477125 1.4:-46413660 None:intergenic
ATCAATTCATCGGGCAGATA+CGG 0.477260 1.4:-46412940 None:intergenic
CGAGTCAAGAGATGATTACT+TGG 0.482225 1.4:+46413371 MS.gene034677:CDS
CAATGGGGCTATTCACTGGT+TGG 0.483990 1.4:+46413560 MS.gene034677:CDS
TTCAGAAAATGGATTCGGAT+TGG 0.484102 1.4:+46413952 MS.gene034677:CDS
TTGCCTTTCATTTAATGGAA+AGG 0.488920 1.4:+46413616 MS.gene034677:CDS
TAGAGGATTTCTCAGTCTAT+GGG 0.489737 1.4:+46413707 MS.gene034677:CDS
AAATTAGGGTTCAATAGAAA+AGG 0.497361 1.4:-46413174 None:intergenic
TGGTGAGATATGATGACGAA+GGG 0.498936 1.4:+46413897 MS.gene034677:CDS
ATGATGTGCTATCTCGCATT+GGG 0.506359 1.4:+46413430 MS.gene034677:CDS
TATCCTTTCCATTAAATGAA+AGG 0.507802 1.4:-46413619 None:intergenic
GTTGGAACAGATGGATGTAC+TGG 0.538786 1.4:+46413870 MS.gene034677:intron
TCTACGAGTGTGTGTTGAAG+AGG 0.539919 1.4:-46413079 None:intergenic
TCTACCACAGAATAAGCAAA+AGG 0.540037 1.4:-46413528 None:intergenic
GATGATGTGCTATCTCGCAT+TGG 0.540292 1.4:+46413429 MS.gene034677:CDS
CAGCGGAAGATGCATGGCGG+AGG 0.544549 1.4:+46412906 None:intergenic
TAAGCTTGCTCAGTGTCACT+GGG 0.546819 1.4:-46414004 None:intergenic
TTTAAACGTGAATAATTAGG+AGG 0.552430 1.4:-46413327 None:intergenic
TGAGTTTGGAATACAATCAT+GGG 0.556899 1.4:-46413406 None:intergenic
AAACGTGAATAATTAGGAGG+AGG 0.557127 1.4:-46413324 None:intergenic
AAAGTTATAGGTTCATGTAG+AGG 0.565302 1.4:+46413225 MS.gene034677:CDS
TTGGTGAGATATGATGACGA+AGG 0.570729 1.4:+46413896 MS.gene034677:CDS
ACTTCTAGGAATTCCTCTCC+CGG 0.575482 1.4:+46413641 MS.gene034677:CDS
AGTCTATGAACTCCGGTGGA+TGG 0.579322 1.4:-46413291 None:intergenic
TTTCAATGAGAGCTAATGTG+TGG 0.592234 1.4:+46413457 MS.gene034677:CDS
AACCATATTCAATATCATCC+GGG 0.594830 1.4:-46413659 None:intergenic
TATTCAATATCATCCGGGAG+AGG 0.596373 1.4:-46413654 None:intergenic
TACCTATGGAATCCATCCAC+CGG 0.599416 1.4:+46413279 MS.gene034677:CDS
GAATAATTAGGAGGAGGCGA+AGG 0.607195 1.4:-46413318 None:intergenic
TCATCGGGCAGATACGGTGG+TGG 0.618606 1.4:-46412934 None:intergenic
GTGAATAGCCCCATTGAAGA+CGG 0.620896 1.4:-46413553 None:intergenic
TATTAGTCTATGAACTCCGG+TGG 0.622217 1.4:-46413295 None:intergenic
AGGTATTAGTCTATGAACTC+CGG 0.626341 1.4:-46413298 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.641792 1.4:-46413281 None:intergenic
AATTCATCGGGCAGATACGG+TGG 0.663893 1.4:-46412937 None:intergenic
GGTGAGATATGATGACGAAG+GGG 0.666620 1.4:+46413898 MS.gene034677:CDS
GGTAGAGTCCGTCTTCAATG+GGG 0.708990 1.4:+46413545 MS.gene034677:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAAACGTGAATAATT+AGG - chr1.4:46413333-46413352 None:intergenic 15.0%
!! ATTTAGGAAGATCAAAATTA+GGG - chr1.4:46413191-46413210 None:intergenic 20.0%
!! TATTGTAAAGATTCAGAAAA+TGG + chr1.4:46413941-46413960 MS.gene034677:CDS 20.0%
!!! CGTTTAAATTTCTATAGTTT+TGG + chr1.4:46413342-46413361 MS.gene034677:CDS 20.0%
! AAATTAGGGTTCAATAGAAA+AGG - chr1.4:46413177-46413196 None:intergenic 25.0%
! CATTTCGATCTTAAAGTTAT+AGG + chr1.4:46413213-46413232 MS.gene034677:CDS 25.0%
! GATTTAGGAAGATCAAAATT+AGG - chr1.4:46413192-46413211 None:intergenic 25.0%
! TATCCTTTCCATTAAATGAA+AGG - chr1.4:46413622-46413641 None:intergenic 25.0%
! TATTGTTGCCTTTCATTTAA+TGG + chr1.4:46413611-46413630 MS.gene034677:CDS 25.0%
! TGATCACCAAAATCTTATTA+AGG + chr1.4:46412959-46412978 MS.gene034677:CDS 25.0%
! TGTAATTTATGGGTATTTAG+AGG + chr1.4:46413690-46413709 MS.gene034677:CDS 25.0%
! TTAAGATCGAAATGAGATTT+AGG - chr1.4:46413207-46413226 None:intergenic 25.0%
! TTCGACAGATTGTAATTTAT+GGG + chr1.4:46413680-46413699 MS.gene034677:CDS 25.0%
! TTTAAACGTGAATAATTAGG+AGG - chr1.4:46413330-46413349 None:intergenic 25.0%
!! AAAGATTCAGAAAATGGATT+CGG + chr1.4:46413947-46413966 MS.gene034677:CDS 25.0%
!! ACTTTTTGTACAACATACAA+GGG - chr1.4:46413841-46413860 None:intergenic 25.0%
!! TGGTAACCTTAATAAGATTT+TGG - chr1.4:46412968-46412987 None:intergenic 25.0%
!!! ACTTGGATAAAGTTGATATA+TGG + chr1.4:46413739-46413758 MS.gene034677:CDS 25.0%
!!! ATGTAGAGGTTTTATATTGT+TGG + chr1.4:46413239-46413258 MS.gene034677:CDS 25.0%
!!! CTTGGATAAAGTTGATATAT+GGG + chr1.4:46413740-46413759 MS.gene034677:CDS 25.0%
!!! GTTTTTCAAACATTTACCTA+TGG + chr1.4:46413265-46413284 MS.gene034677:CDS 25.0%
AAACGAATAAGAGACTTAAC+TGG - chr1.4:46412988-46413007 None:intergenic 30.0%
AAAGCTATAGATCGAAATTC+AGG - chr1.4:46413126-46413145 None:intergenic 30.0%
AAAGTTATAGGTTCATGTAG+AGG + chr1.4:46413225-46413244 MS.gene034677:CDS 30.0%
AACCATATTCAATATCATCC+GGG - chr1.4:46413662-46413681 None:intergenic 30.0%
AATACAAAGTGAAGTCATCT+TGG + chr1.4:46413772-46413791 MS.gene034677:intron 30.0%
ACAAAAAGTCGTGATATTGT+TGG + chr1.4:46413852-46413871 MS.gene034677:intron 30.0%
CTCACTGTAAAAAGGTAAAT+GGG - chr1.4:46413502-46413521 None:intergenic 30.0%
GAACCATATTCAATATCATC+CGG - chr1.4:46413663-46413682 None:intergenic 30.0%
GTTCGACAGATTGTAATTTA+TGG + chr1.4:46413679-46413698 MS.gene034677:CDS 30.0%
TACAAGGGAAATGTAAGAAA+TGG - chr1.4:46413826-46413845 None:intergenic 30.0%
TACAATAATCGTTATGCTCT+AGG - chr1.4:46413928-46413947 None:intergenic 30.0%
TCAAATCAGTTTGTAAGTCA+TGG + chr1.4:46413007-46413026 MS.gene034677:CDS 30.0%
TTAATGGAAAGGATACTTCT+AGG + chr1.4:46413627-46413646 MS.gene034677:CDS 30.0%
TTGCCTTTCATTTAATGGAA+AGG + chr1.4:46413616-46413635 MS.gene034677:CDS 30.0%
! GACTTTTTGTACAACATACA+AGG - chr1.4:46413842-46413861 None:intergenic 30.0%
! TGAGTTTGGAATACAATCAT+GGG - chr1.4:46413409-46413428 None:intergenic 30.0%
! TTATCCTTTTGCTTATTCTG+TGG + chr1.4:46413524-46413543 MS.gene034677:CDS 30.0%
!! ATTTTGGTGATCAATTCATC+GGG - chr1.4:46412952-46412971 None:intergenic 30.0%
!! GATTTTGGTGATCAATTCAT+CGG - chr1.4:46412953-46412972 None:intergenic 30.0%
AAACGTGAATAATTAGGAGG+AGG - chr1.4:46413327-46413346 None:intergenic 35.0%
CGTAGAATTCTCTTCATAAC+AGG + chr1.4:46413096-46413115 MS.gene034677:CDS 35.0%
CTGTAAAAAGGTAAATGGGT+AGG - chr1.4:46413498-46413517 None:intergenic 35.0%
GCTCACTGTAAAAAGGTAAA+TGG - chr1.4:46413503-46413522 None:intergenic 35.0%
GGATAAAGCTCACTGTAAAA+AGG - chr1.4:46413510-46413529 None:intergenic 35.0%
TAGAGGATTTCTCAGTCTAT+GGG + chr1.4:46413707-46413726 MS.gene034677:CDS 35.0%
TCTACCACAGAATAAGCAAA+AGG - chr1.4:46413531-46413550 None:intergenic 35.0%
TTAGAGGATTTCTCAGTCTA+TGG + chr1.4:46413706-46413725 MS.gene034677:CDS 35.0%
TTTCAATGAGAGCTAATGTG+TGG + chr1.4:46413457-46413476 MS.gene034677:CDS 35.0%
! AGGTATTAGTCTATGAACTC+CGG - chr1.4:46413301-46413320 None:intergenic 35.0%
! ATTTCTCAGTCTATGGGTTT+TGG + chr1.4:46413713-46413732 MS.gene034677:CDS 35.0%
! CTGAGTTTGGAATACAATCA+TGG - chr1.4:46413410-46413429 None:intergenic 35.0%
! TTCAGAAAATGGATTCGGAT+TGG + chr1.4:46413952-46413971 MS.gene034677:CDS 35.0%
! TTTCTCAGTCTATGGGTTTT+GGG + chr1.4:46413714-46413733 MS.gene034677:CDS 35.0%
ATCAATTCATCGGGCAGATA+CGG - chr1.4:46412943-46412962 None:intergenic 40.0%
ATGATGTGCTATCTCGCATT+GGG + chr1.4:46413430-46413449 MS.gene034677:CDS 40.0%
CAGATGGATGTACTGGATAT+TGG + chr1.4:46413877-46413896 MS.gene034677:intron 40.0%
CGAGTCAAGAGATGATTACT+TGG + chr1.4:46413371-46413390 MS.gene034677:CDS 40.0%
CGTGATATTGTTGGAACAGA+TGG + chr1.4:46413861-46413880 MS.gene034677:intron 40.0%
CTCCCGGATGATATTGAATA+TGG + chr1.4:46413657-46413676 MS.gene034677:CDS 40.0%
GATAGCACATCATCTGAGTT+TGG - chr1.4:46413423-46413442 None:intergenic 40.0%
TATTCAATATCATCCGGGAG+AGG - chr1.4:46413657-46413676 None:intergenic 40.0%
! TATTAGTCTATGAACTCCGG+TGG - chr1.4:46413298-46413317 None:intergenic 40.0%
! TGGTGAGATATGATGACGAA+GGG + chr1.4:46413897-46413916 MS.gene034677:CDS 40.0%
! TTCTCAGTCTATGGGTTTTG+GGG + chr1.4:46413715-46413734 MS.gene034677:CDS 40.0%
! TTGGTGAGATATGATGACGA+AGG + chr1.4:46413896-46413915 MS.gene034677:CDS 40.0%
GAATAATTAGGAGGAGGCGA+AGG - chr1.4:46413321-46413340 None:intergenic 45.0%
GATGATGTGCTATCTCGCAT+TGG + chr1.4:46413429-46413448 MS.gene034677:CDS 45.0%
GTGAATAGCCCCATTGAAGA+CGG - chr1.4:46413556-46413575 None:intergenic 45.0%
GTTGGAACAGATGGATGTAC+TGG + chr1.4:46413870-46413889 MS.gene034677:intron 45.0%
TACCTATGGAATCCATCCAC+CGG + chr1.4:46413279-46413298 MS.gene034677:CDS 45.0%
TCTACGAGTGTGTGTTGAAG+AGG - chr1.4:46413082-46413101 None:intergenic 45.0%
TCTTCAATGGGGCTATTCAC+TGG + chr1.4:46413556-46413575 MS.gene034677:CDS 45.0%
TGGTAGAGTCCGTCTTCAAT+GGG + chr1.4:46413544-46413563 MS.gene034677:CDS 45.0%
! ACTTCTAGGAATTCCTCTCC+CGG + chr1.4:46413641-46413660 MS.gene034677:CDS 45.0%
! GGTGAGATATGATGACGAAG+GGG + chr1.4:46413898-46413917 MS.gene034677:CDS 45.0%
! TAAGCTTGCTCAGTGTCACT+GGG - chr1.4:46414007-46414026 None:intergenic 45.0%
! TTAAGCTTGCTCAGTGTCAC+TGG - chr1.4:46414008-46414027 None:intergenic 45.0%
!! TCTCAGTCTATGGGTTTTGG+GGG + chr1.4:46413716-46413735 MS.gene034677:CDS 45.0%
AATTCATCGGGCAGATACGG+TGG - chr1.4:46412940-46412959 None:intergenic 50.0%
AGTCTATGAACTCCGGTGGA+TGG - chr1.4:46413294-46413313 None:intergenic 50.0%
CAATGGGGCTATTCACTGGT+TGG + chr1.4:46413560-46413579 MS.gene034677:CDS 50.0%
GGTAGAGTCCGTCTTCAATG+GGG + chr1.4:46413545-46413564 MS.gene034677:CDS 50.0%
GTGGTAGAGTCCGTCTTCAA+TGG + chr1.4:46413543-46413562 MS.gene034677:CDS 50.0%
!!! TCTATGGGTTTTGGGGGACT+TGG + chr1.4:46413722-46413741 MS.gene034677:CDS 50.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr1.4:46413284-46413303 None:intergenic 55.0%
TCATCGGGCAGATACGGTGG+TGG - chr1.4:46412937-46412956 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 46412919 46414027 46412919 ID=MS.gene034677
chr1.4 mRNA 46412919 46414027 46412919 ID=MS.gene034677.t1;Parent=MS.gene034677
chr1.4 exon 46412919 46413784 46412919 ID=MS.gene034677.t1.exon1;Parent=MS.gene034677.t1
chr1.4 CDS 46412919 46413784 46412919 ID=cds.MS.gene034677.t1;Parent=MS.gene034677.t1
chr1.4 exon 46413880 46414027 46413880 ID=MS.gene034677.t1.exon2;Parent=MS.gene034677.t1
chr1.4 CDS 46413880 46414027 46413880 ID=cds.MS.gene034677.t1;Parent=MS.gene034677.t1
Gene Sequence

>MS.gene034677

ATGGCGGAGGTGGATCCACCACCGTATCTGCCCGATGAATTGATCACCAAAATCTTATTAAGGTTACCAGTTAAGTCTCTTATTCGTTTCAAATCAGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATTCTCACTTTGCAAATTCACATTTTCAACTTACCTCTTCAACACACACTCGTAGAATTCTCTTCATAACAGGAATTCCTGAATTTCGATCTATAGCTTTAGATTCATTGTTTACTTCTGATTCTGCTCCTTTTCTATTGAACCCTAATTTTGATCTTCCTAAATCTCATTTCGATCTTAAAGTTATAGGTTCATGTAGAGGTTTTATATTGTTGGAGTGTTTTTCAAACATTTACCTATGGAATCCATCCACCGGAGTTCATAGACTAATACCTTCGCCTCCTCCTAATTATTCACGTTTAAATTTCTATAGTTTTGGCTATGACGAGTCAAGAGATGATTACTTGGTAGTTTTATTATCCCATGATTGTATTCCAAACTCAGATGATGTGCTATCTCGCATTGGGATTTTTTCAATGAGAGCTAATGTGTGGAACGAAATTATGAGTCCTACCCATTTACCTTTTTACAGTGAGCTTTATCCTTTTGCTTATTCTGTGGTAGAGTCCGTCTTCAATGGGGCTATTCACTGGTTGGCTATTCGTTATGATACATATGAGTATGTTATTGTTGCCTTTCATTTAATGGAAAGGATACTTCTAGGAATTCCTCTCCCGGATGATATTGAATATGGTTCGACAGATTGTAATTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTTGGGGGACTTGGATAAAGTTGATATATGGGTGATGAAAGAATACAAAGTGAAGTCATCTTGGACTAAAACTCTTGTTCTTGATTTGCATACCATTTCTTACATTTCCCTTGTATGTTGTACAAAAAGTCGTGATATTGTTGGAACAGATGGATGTACTGGATATTGGTGAGATATGATGACGAAGGGGAGTTCCTAGAGCATAACGATTATTGTAAAGATTCAGAAAATGGATTCGGATTGGTTGTGTATACAGAGTCTCTGCTTTCGTTGCCCAGTGACACTGAGCAAGCTTAA

Protein sequence

>MS.gene034677.t1

MAEVDPPPYLPDELITKILLRLPVKSLIRFKSVCKSWFSLISDSHFANSHFQLTSSTHTRRILFITGIPEFRSIALDSLFTSDSAPFLLNPNFDLPKSHFDLKVIGSCRGFILLECFSNIYLWNPSTGVHRLIPSPPPNYSRLNFYSFGYDESRDDYLVVLLSHDCIPNSDDVLSRIGIFSMRANVWNEIMSPTHLPFYSELYPFAYSVVESVFNGAIHWLAIRYDTYEYVIVAFHLMERILLGIPLPDDIEYGSTDCNLWVFRGFLSLWVLGDLDKVDIWVMKEYKVKWMYWILVRYDDEGEFLEHNDYCKDSENGFGLVVYTESLLSLPSDTEQA