Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047279.t1 | XP_013441647.1 | 91.1 | 179 | 16 | 0 | 1 | 179 | 1 | 179 | 4.40E-88 | 334 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047279.t1 | Q9SU30 | 30.4 | 168 | 98 | 5 | 6 | 169 | 4 | 156 | 6.9e-13 | 75.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047279.t1 | A0A072TE54 | 91.1 | 179 | 16 | 0 | 1 | 179 | 1 | 179 | 3.2e-88 | 334.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047279.t1 | MTR_0667s0010 | 91.061 | 179 | 16 | 0 | 1 | 179 | 1 | 179 | 1.09e-115 | 334 |
MS.gene047279.t1 | MTR_2g426070 | 65.803 | 193 | 51 | 5 | 1 | 179 | 1 | 192 | 3.80e-79 | 241 |
MS.gene047279.t1 | MTR_3g083010 | 66.327 | 196 | 48 | 5 | 1 | 179 | 1 | 195 | 1.32e-78 | 240 |
MS.gene047279.t1 | MTR_2g028110 | 71.512 | 172 | 46 | 2 | 6 | 177 | 4 | 172 | 2.07e-78 | 238 |
MS.gene047279.t1 | MTR_2g426060 | 70.718 | 181 | 42 | 6 | 1 | 172 | 1 | 179 | 5.28e-77 | 236 |
MS.gene047279.t1 | MTR_2g425980 | 68.085 | 188 | 48 | 5 | 1 | 179 | 1 | 185 | 5.28e-77 | 236 |
MS.gene047279.t1 | MTR_2g024100 | 76.875 | 160 | 36 | 1 | 21 | 179 | 22 | 181 | 2.60e-74 | 229 |
MS.gene047279.t1 | MTR_2g426020 | 65.574 | 183 | 49 | 5 | 1 | 172 | 1 | 180 | 2.84e-73 | 226 |
MS.gene047279.t1 | MTR_8g099460 | 68.539 | 178 | 53 | 2 | 1 | 176 | 1 | 177 | 1.73e-72 | 224 |
MS.gene047279.t1 | MTR_2g028130 | 65.464 | 194 | 48 | 6 | 1 | 179 | 1 | 190 | 4.79e-72 | 223 |
MS.gene047279.t1 | MTR_2g426090 | 65.405 | 185 | 52 | 5 | 1 | 175 | 1 | 183 | 2.29e-71 | 221 |
MS.gene047279.t1 | MTR_2g025420 | 59.585 | 193 | 64 | 4 | 1 | 179 | 1 | 193 | 2.67e-71 | 221 |
MS.gene047279.t1 | MTR_2g028140 | 65.816 | 196 | 48 | 6 | 1 | 179 | 1 | 194 | 1.31e-70 | 219 |
MS.gene047279.t1 | MTR_4g070550 | 66.316 | 190 | 51 | 6 | 1 | 179 | 1 | 188 | 1.73e-70 | 219 |
MS.gene047279.t1 | MTR_2g028160 | 61.340 | 194 | 56 | 5 | 1 | 179 | 1 | 190 | 1.23e-68 | 214 |
MS.gene047279.t1 | MTR_2g021050 | 61.202 | 183 | 41 | 5 | 1 | 179 | 1 | 157 | 3.66e-63 | 199 |
MS.gene047279.t1 | MTR_2g031720 | 61.878 | 181 | 50 | 6 | 1 | 177 | 1 | 166 | 3.09e-62 | 197 |
MS.gene047279.t1 | MTR_2g031700 | 58.757 | 177 | 59 | 4 | 1 | 177 | 1 | 163 | 4.39e-60 | 189 |
MS.gene047279.t1 | MTR_2g031640 | 58.989 | 178 | 58 | 5 | 1 | 177 | 1 | 164 | 7.53e-59 | 188 |
MS.gene047279.t1 | MTR_1g068875 | 60.234 | 171 | 57 | 3 | 6 | 176 | 4 | 163 | 1.79e-57 | 184 |
MS.gene047279.t1 | MTR_1g068835 | 57.471 | 174 | 60 | 4 | 6 | 177 | 4 | 165 | 6.50e-56 | 181 |
MS.gene047279.t1 | MTR_2g031680 | 57.303 | 178 | 62 | 4 | 1 | 178 | 1 | 164 | 4.30e-55 | 179 |
MS.gene047279.t1 | MTR_1g068905 | 58.642 | 162 | 55 | 3 | 6 | 166 | 4 | 154 | 2.38e-53 | 172 |
MS.gene047279.t1 | MTR_1g068860 | 59.195 | 174 | 58 | 4 | 6 | 177 | 4 | 166 | 1.08e-52 | 172 |
MS.gene047279.t1 | MTR_2g026010 | 57.803 | 173 | 59 | 4 | 6 | 177 | 4 | 163 | 2.20e-52 | 172 |
MS.gene047279.t1 | MTR_4g006270 | 55.758 | 165 | 58 | 4 | 6 | 170 | 4 | 153 | 4.56e-49 | 164 |
MS.gene047279.t1 | MTR_2g024110 | 50.588 | 170 | 67 | 5 | 6 | 172 | 4 | 159 | 3.41e-46 | 155 |
MS.gene047279.t1 | MTR_2g022170 | 57.664 | 137 | 45 | 3 | 9 | 145 | 7 | 130 | 4.93e-44 | 142 |
MS.gene047279.t1 | MTR_2g025960 | 70.455 | 88 | 21 | 1 | 90 | 172 | 1 | 88 | 1.92e-35 | 126 |
MS.gene047279.t1 | MTR_7g110360 | 44.571 | 175 | 76 | 5 | 6 | 170 | 39 | 202 | 5.74e-35 | 125 |
MS.gene047279.t1 | MTR_4g133170 | 40.000 | 175 | 91 | 3 | 6 | 177 | 4 | 167 | 5.54e-34 | 124 |
MS.gene047279.t1 | MTR_5g083940 | 42.424 | 165 | 48 | 5 | 6 | 170 | 4 | 121 | 1.76e-27 | 105 |
MS.gene047279.t1 | MTR_2g437190 | 53.097 | 113 | 36 | 4 | 48 | 155 | 56 | 156 | 2.76e-23 | 90.9 |
MS.gene047279.t1 | MTR_2g025995 | 85.714 | 49 | 7 | 0 | 1 | 49 | 1 | 49 | 3.31e-20 | 84.7 |
MS.gene047279.t1 | MTR_2g040050 | 43.137 | 102 | 47 | 3 | 69 | 169 | 16 | 107 | 1.08e-19 | 83.6 |
MS.gene047279.t1 | MTR_3g034180 | 31.429 | 175 | 95 | 4 | 6 | 171 | 123 | 281 | 1.26e-18 | 82.8 |
MS.gene047279.t1 | MTR_3g034160 | 31.429 | 175 | 95 | 4 | 6 | 171 | 9 | 167 | 2.55e-18 | 81.3 |
MS.gene047279.t1 | MTR_7g070440 | 33.333 | 174 | 102 | 7 | 9 | 178 | 10 | 173 | 1.23e-17 | 79.3 |
MS.gene047279.t1 | MTR_3g014540 | 30.286 | 175 | 92 | 4 | 6 | 169 | 29 | 184 | 1.28e-17 | 79.3 |
MS.gene047279.t1 | MTR_3g086970 | 40.288 | 139 | 54 | 6 | 32 | 170 | 14 | 123 | 2.45e-17 | 75.5 |
MS.gene047279.t1 | MTR_4g102410 | 27.273 | 187 | 108 | 5 | 2 | 169 | 57 | 234 | 2.50e-17 | 79.0 |
MS.gene047279.t1 | MTR_4g061340 | 32.749 | 171 | 96 | 6 | 6 | 169 | 26 | 184 | 3.76e-17 | 78.2 |
MS.gene047279.t1 | MTR_2g021155 | 33.136 | 169 | 91 | 6 | 9 | 171 | 39 | 191 | 1.62e-16 | 77.0 |
MS.gene047279.t1 | MTR_1g056710 | 32.955 | 176 | 86 | 7 | 5 | 169 | 33 | 187 | 1.96e-16 | 76.3 |
MS.gene047279.t1 | MTR_3g058470 | 29.670 | 182 | 97 | 6 | 6 | 169 | 37 | 205 | 4.46e-16 | 75.1 |
MS.gene047279.t1 | MTR_7g017040 | 29.775 | 178 | 100 | 6 | 6 | 168 | 16 | 183 | 5.14e-16 | 75.1 |
MS.gene047279.t1 | MTR_3g014570 | 29.825 | 171 | 90 | 4 | 6 | 165 | 29 | 180 | 5.89e-16 | 74.7 |
MS.gene047279.t1 | MTR_3g007330 | 30.303 | 165 | 99 | 4 | 6 | 167 | 48 | 199 | 9.66e-16 | 74.3 |
MS.gene047279.t1 | MTR_6g053260 | 31.892 | 185 | 102 | 7 | 6 | 179 | 337 | 508 | 1.43e-15 | 73.9 |
MS.gene047279.t1 | MTR_5g046300 | 31.977 | 172 | 94 | 7 | 6 | 169 | 4 | 160 | 1.46e-15 | 73.6 |
MS.gene047279.t1 | MTR_5g046290 | 31.977 | 172 | 94 | 7 | 6 | 169 | 4 | 160 | 1.46e-15 | 73.6 |
MS.gene047279.t1 | MTR_3g006670 | 31.214 | 173 | 96 | 4 | 6 | 169 | 49 | 207 | 2.06e-15 | 73.2 |
MS.gene047279.t1 | MTR_3g058440 | 28.889 | 180 | 100 | 6 | 5 | 169 | 34 | 200 | 4.10e-15 | 72.0 |
MS.gene047279.t1 | MTR_2g022000 | 28.866 | 194 | 99 | 7 | 2 | 168 | 12 | 193 | 4.13e-15 | 72.4 |
MS.gene047279.t1 | MTR_4g080200 | 30.120 | 166 | 98 | 4 | 5 | 169 | 2 | 150 | 5.18e-15 | 72.0 |
MS.gene047279.t1 | MTR_5g069760 | 32.143 | 140 | 74 | 2 | 1 | 126 | 1 | 133 | 5.57e-15 | 72.0 |
MS.gene047279.t1 | MTR_3g058480 | 27.222 | 180 | 104 | 5 | 6 | 169 | 39 | 207 | 7.33e-15 | 71.2 |
MS.gene047279.t1 | MTR_8g073550 | 28.571 | 175 | 98 | 5 | 6 | 169 | 30 | 188 | 8.17e-15 | 70.1 |
MS.gene047279.t1 | MTR_1g055070 | 31.148 | 183 | 96 | 7 | 5 | 169 | 48 | 218 | 1.41e-14 | 70.9 |
MS.gene047279.t1 | MTR_8g039500 | 27.684 | 177 | 106 | 4 | 2 | 168 | 8 | 172 | 2.55e-14 | 70.1 |
MS.gene047279.t1 | MTR_7g078900 | 31.937 | 191 | 94 | 9 | 9 | 172 | 15 | 196 | 2.56e-14 | 70.1 |
MS.gene047279.t1 | MTR_7g077070 | 31.217 | 189 | 93 | 7 | 6 | 167 | 16 | 194 | 2.82e-14 | 70.1 |
MS.gene047279.t1 | MTR_4g013180 | 32.308 | 130 | 73 | 5 | 6 | 126 | 11 | 134 | 3.39e-14 | 70.1 |
MS.gene047279.t1 | MTR_5g097220 | 29.474 | 190 | 99 | 9 | 2 | 168 | 9 | 186 | 3.88e-14 | 69.7 |
MS.gene047279.t1 | MTR_3g009310 | 31.073 | 177 | 94 | 5 | 6 | 169 | 42 | 203 | 4.46e-14 | 69.3 |
MS.gene047279.t1 | MTR_8g013010 | 28.161 | 174 | 102 | 5 | 6 | 170 | 54 | 213 | 4.73e-14 | 68.9 |
MS.gene047279.t1 | MTR_3g007410 | 33.929 | 168 | 92 | 9 | 9 | 169 | 55 | 210 | 4.90e-14 | 69.3 |
MS.gene047279.t1 | MTR_1g029650 | 32.867 | 143 | 70 | 5 | 6 | 125 | 8 | 147 | 6.42e-14 | 68.9 |
MS.gene047279.t1 | MTR_2g021190 | 32.955 | 176 | 87 | 8 | 6 | 169 | 21 | 177 | 7.04e-14 | 68.9 |
MS.gene047279.t1 | MTR_2g029990 | 30.857 | 175 | 92 | 7 | 7 | 169 | 52 | 209 | 7.56e-14 | 68.9 |
MS.gene047279.t1 | MTR_3g024040 | 33.537 | 164 | 84 | 8 | 12 | 169 | 37 | 181 | 8.72e-14 | 68.6 |
MS.gene047279.t1 | MTR_5g097330 | 25.806 | 186 | 116 | 5 | 2 | 168 | 12 | 194 | 8.81e-14 | 68.6 |
MS.gene047279.t1 | MTR_3g036290 | 30.337 | 178 | 88 | 7 | 6 | 169 | 22 | 177 | 9.12e-14 | 68.6 |
MS.gene047279.t1 | MTR_6g053240 | 29.688 | 192 | 102 | 8 | 6 | 179 | 28 | 204 | 1.21e-13 | 68.2 |
MS.gene047279.t1 | MTR_8g062660 | 30.159 | 189 | 104 | 7 | 6 | 175 | 22 | 201 | 1.41e-13 | 68.2 |
MS.gene047279.t1 | MTR_6g065980 | 30.636 | 173 | 93 | 5 | 6 | 170 | 16 | 169 | 1.68e-13 | 67.8 |
MS.gene047279.t1 | MTR_5g057643 | 34.857 | 175 | 89 | 7 | 6 | 169 | 46 | 206 | 1.75e-13 | 67.0 |
MS.gene047279.t1 | MTR_4g024890 | 28.090 | 178 | 101 | 6 | 1 | 167 | 5 | 166 | 1.78e-13 | 67.8 |
MS.gene047279.t1 | MTR_5g007610 | 29.714 | 175 | 101 | 6 | 6 | 169 | 41 | 204 | 1.89e-13 | 67.8 |
MS.gene047279.t1 | MTR_2g065860 | 29.348 | 184 | 101 | 8 | 6 | 168 | 12 | 187 | 2.33e-13 | 67.4 |
MS.gene047279.t1 | MTR_5g057790 | 34.857 | 175 | 89 | 7 | 6 | 169 | 46 | 206 | 2.37e-13 | 67.4 |
MS.gene047279.t1 | MTR_3g011100 | 30.682 | 176 | 96 | 8 | 6 | 169 | 235 | 396 | 2.46e-13 | 67.4 |
MS.gene047279.t1 | MTR_4g030830 | 28.652 | 178 | 94 | 7 | 6 | 167 | 9 | 169 | 2.65e-13 | 67.4 |
MS.gene047279.t1 | MTR_5g096630 | 30.055 | 183 | 100 | 9 | 6 | 169 | 18 | 191 | 2.77e-13 | 67.4 |
MS.gene047279.t1 | MTR_3g007360 | 30.723 | 166 | 100 | 6 | 9 | 169 | 55 | 210 | 2.89e-13 | 67.0 |
MS.gene047279.t1 | MTR_7g078840 | 35.172 | 145 | 68 | 5 | 6 | 126 | 10 | 152 | 3.54e-13 | 67.0 |
MS.gene047279.t1 | MTR_4g129190 | 29.050 | 179 | 103 | 5 | 1 | 167 | 1 | 167 | 3.58e-13 | 67.0 |
MS.gene047279.t1 | MTR_5g057710 | 31.111 | 180 | 89 | 6 | 6 | 169 | 46 | 206 | 3.66e-13 | 67.0 |
MS.gene047279.t1 | MTR_6g086825 | 27.778 | 198 | 112 | 6 | 1 | 177 | 65 | 252 | 3.85e-13 | 67.0 |
MS.gene047279.t1 | MTR_4g019990 | 28.804 | 184 | 99 | 7 | 1 | 167 | 1 | 169 | 4.42e-13 | 66.6 |
MS.gene047279.t1 | MTR_6g465360 | 30.851 | 188 | 96 | 8 | 6 | 168 | 62 | 240 | 4.82e-13 | 65.9 |
MS.gene047279.t1 | MTR_3g083640 | 30.939 | 181 | 97 | 6 | 6 | 173 | 55 | 220 | 4.90e-13 | 66.6 |
MS.gene047279.t1 | MTR_2g021800 | 26.943 | 193 | 105 | 5 | 2 | 168 | 12 | 194 | 5.24e-13 | 66.6 |
MS.gene047279.t1 | MTR_5g011200 | 32.796 | 186 | 85 | 10 | 3 | 169 | 14 | 178 | 5.54e-13 | 66.2 |
MS.gene047279.t1 | MTR_2g021252 | 28.736 | 174 | 91 | 6 | 9 | 169 | 50 | 203 | 5.98e-13 | 66.2 |
MS.gene047279.t1 | MTR_4g031770 | 29.379 | 177 | 89 | 7 | 5 | 170 | 3 | 154 | 6.37e-13 | 66.2 |
MS.gene047279.t1 | MTR_3g013770 | 29.609 | 179 | 85 | 6 | 6 | 165 | 33 | 189 | 9.05e-13 | 65.9 |
MS.gene047279.t1 | MTR_7g016930 | 26.316 | 171 | 107 | 5 | 2 | 168 | 12 | 167 | 9.40e-13 | 65.5 |
MS.gene047279.t1 | MTR_7g079160 | 31.188 | 202 | 92 | 8 | 6 | 167 | 8 | 202 | 9.99e-13 | 65.9 |
MS.gene047279.t1 | MTR_4g023090 | 31.638 | 177 | 99 | 6 | 6 | 174 | 16 | 178 | 1.07e-12 | 65.5 |
MS.gene047279.t1 | MTR_5g069930 | 31.690 | 142 | 76 | 3 | 1 | 126 | 1 | 137 | 1.10e-12 | 65.5 |
MS.gene047279.t1 | MTR_6g007135 | 28.409 | 176 | 103 | 5 | 6 | 169 | 26 | 190 | 1.31e-12 | 65.1 |
MS.gene047279.t1 | MTR_8g064890 | 30.108 | 186 | 102 | 8 | 1 | 168 | 11 | 186 | 1.35e-12 | 65.1 |
MS.gene047279.t1 | MTR_6g027910 | 27.222 | 180 | 106 | 7 | 9 | 171 | 12 | 183 | 1.51e-12 | 65.1 |
MS.gene047279.t1 | MTR_5g046260 | 30.460 | 174 | 79 | 7 | 6 | 169 | 4 | 145 | 1.54e-12 | 64.7 |
MS.gene047279.t1 | MTR_0267s0050 | 29.348 | 184 | 110 | 6 | 1 | 171 | 1 | 177 | 1.77e-12 | 64.7 |
MS.gene047279.t1 | MTR_5g057040 | 30.556 | 180 | 90 | 5 | 6 | 169 | 46 | 206 | 1.84e-12 | 65.1 |
MS.gene047279.t1 | MTR_1g015740 | 32.353 | 136 | 76 | 2 | 6 | 127 | 8 | 141 | 2.34e-12 | 64.3 |
MS.gene047279.t1 | MTR_3g006570 | 29.545 | 176 | 101 | 7 | 6 | 172 | 21 | 182 | 3.04e-12 | 64.3 |
MS.gene047279.t1 | MTR_4g116330 | 29.121 | 182 | 95 | 6 | 2 | 170 | 19 | 179 | 3.19e-12 | 63.9 |
MS.gene047279.t1 | MTR_4g116330 | 29.121 | 182 | 95 | 6 | 2 | 170 | 19 | 179 | 3.40e-12 | 63.9 |
MS.gene047279.t1 | MTR_6g070880 | 25.789 | 190 | 116 | 6 | 6 | 175 | 32 | 216 | 3.61e-12 | 63.2 |
MS.gene047279.t1 | MTR_6g071420 | 25.789 | 190 | 116 | 6 | 6 | 175 | 32 | 216 | 3.61e-12 | 63.2 |
MS.gene047279.t1 | MTR_8g033110 | 27.895 | 190 | 103 | 8 | 1 | 170 | 9 | 184 | 3.78e-12 | 63.9 |
MS.gene047279.t1 | MTR_3g464470 | 31.214 | 173 | 96 | 7 | 2 | 167 | 3 | 159 | 4.02e-12 | 63.9 |
MS.gene047279.t1 | MTR_8g467670 | 27.072 | 181 | 103 | 5 | 6 | 168 | 14 | 183 | 4.04e-12 | 63.9 |
MS.gene047279.t1 | MTR_5g096710 | 28.729 | 181 | 101 | 8 | 6 | 171 | 23 | 190 | 4.31e-12 | 63.9 |
MS.gene047279.t1 | MTR_3g103020 | 30.460 | 174 | 93 | 5 | 6 | 170 | 20 | 174 | 4.57e-12 | 63.5 |
MS.gene047279.t1 | MTR_3g010430 | 31.522 | 184 | 101 | 9 | 6 | 180 | 36 | 203 | 5.39e-12 | 63.5 |
MS.gene047279.t1 | MTR_4g014370 | 25.980 | 204 | 110 | 8 | 2 | 168 | 7 | 206 | 5.55e-12 | 63.5 |
MS.gene047279.t1 | MTR_3g007430 | 27.976 | 168 | 102 | 6 | 9 | 169 | 46 | 201 | 5.99e-12 | 63.2 |
MS.gene047279.t1 | MTR_7g077970 | 29.947 | 187 | 97 | 7 | 6 | 167 | 7 | 184 | 6.76e-12 | 63.2 |
MS.gene047279.t1 | MTR_3g034130 | 27.684 | 177 | 99 | 5 | 6 | 171 | 9 | 167 | 7.71e-12 | 63.2 |
MS.gene047279.t1 | MTR_3g011120 | 29.189 | 185 | 102 | 8 | 1 | 168 | 9 | 181 | 9.08e-12 | 62.8 |
MS.gene047279.t1 | MTR_2g066200 | 27.027 | 185 | 106 | 5 | 2 | 168 | 8 | 181 | 9.22e-12 | 62.8 |
MS.gene047279.t1 | MTR_7g070830 | 29.032 | 186 | 101 | 7 | 6 | 167 | 21 | 199 | 1.05e-11 | 62.8 |
MS.gene047279.t1 | MTR_4g116340 | 31.138 | 167 | 92 | 8 | 6 | 170 | 36 | 181 | 1.13e-11 | 61.6 |
MS.gene047279.t1 | MTR_7g066030 | 29.508 | 183 | 98 | 8 | 6 | 167 | 21 | 193 | 1.16e-11 | 62.4 |
MS.gene047279.t1 | MTR_7g013590 | 31.325 | 166 | 97 | 7 | 9 | 170 | 39 | 191 | 1.22e-11 | 62.4 |
MS.gene047279.t1 | MTR_3g010450 | 30.723 | 166 | 91 | 7 | 10 | 169 | 1 | 148 | 1.24e-11 | 61.6 |
MS.gene047279.t1 | MTR_2g066150 | 27.429 | 175 | 101 | 7 | 6 | 168 | 12 | 172 | 1.25e-11 | 62.4 |
MS.gene047279.t1 | MTR_6g017270 | 28.492 | 179 | 97 | 6 | 6 | 167 | 9 | 173 | 1.36e-11 | 62.0 |
MS.gene047279.t1 | MTR_4g037465 | 31.319 | 182 | 92 | 8 | 6 | 171 | 21 | 185 | 1.40e-11 | 62.4 |
MS.gene047279.t1 | MTR_7g061060 | 28.261 | 184 | 99 | 6 | 6 | 170 | 13 | 182 | 1.92e-11 | 62.0 |
MS.gene047279.t1 | MTR_2g021150 | 29.947 | 187 | 100 | 10 | 6 | 179 | 14 | 182 | 2.27e-11 | 61.6 |
MS.gene047279.t1 | MTR_7g066060 | 30.857 | 175 | 107 | 4 | 6 | 169 | 23 | 194 | 2.32e-11 | 61.6 |
MS.gene047279.t1 | MTR_3g013950 | 29.189 | 185 | 111 | 6 | 1 | 171 | 1 | 179 | 3.01e-11 | 61.2 |
MS.gene047279.t1 | MTR_7g077990 | 31.429 | 140 | 72 | 4 | 6 | 126 | 17 | 151 | 3.04e-11 | 61.2 |
MS.gene047279.t1 | MTR_1g055135 | 28.889 | 180 | 101 | 5 | 6 | 177 | 13 | 173 | 3.05e-11 | 61.2 |
MS.gene047279.t1 | MTR_3g036430 | 30.909 | 165 | 86 | 6 | 6 | 170 | 20 | 156 | 3.08e-11 | 61.2 |
MS.gene047279.t1 | MTR_3g010390 | 28.571 | 182 | 95 | 7 | 6 | 169 | 33 | 197 | 3.41e-11 | 61.2 |
MS.gene047279.t1 | MTR_1g007410 | 27.222 | 180 | 104 | 6 | 6 | 168 | 22 | 191 | 4.07e-11 | 60.8 |
MS.gene047279.t1 | MTR_8g464770 | 25.137 | 183 | 111 | 4 | 2 | 168 | 8 | 180 | 4.36e-11 | 60.8 |
MS.gene047279.t1 | MTR_4g117780 | 27.273 | 165 | 99 | 4 | 6 | 164 | 11 | 160 | 4.37e-11 | 60.8 |
MS.gene047279.t1 | MTR_4g011660 | 27.222 | 180 | 107 | 4 | 6 | 169 | 19 | 190 | 4.51e-11 | 60.8 |
MS.gene047279.t1 | MTR_7g066010 | 30.556 | 180 | 100 | 7 | 6 | 167 | 21 | 193 | 4.70e-11 | 60.8 |
MS.gene047279.t1 | MTR_4g109270 | 31.034 | 174 | 97 | 7 | 6 | 170 | 8 | 167 | 5.01e-11 | 60.5 |
MS.gene047279.t1 | MTR_1g088120 | 34.815 | 135 | 70 | 4 | 9 | 127 | 13 | 145 | 5.03e-11 | 60.8 |
MS.gene047279.t1 | MTR_0649s0020 | 29.714 | 175 | 102 | 5 | 6 | 170 | 11 | 174 | 5.08e-11 | 60.8 |
MS.gene047279.t1 | MTR_1g071010 | 29.457 | 129 | 82 | 4 | 6 | 126 | 15 | 142 | 5.17e-11 | 60.5 |
MS.gene047279.t1 | MTR_1g097490 | 30.636 | 173 | 92 | 8 | 3 | 165 | 46 | 200 | 5.44e-11 | 60.5 |
MS.gene047279.t1 | MTR_2g021950 | 27.624 | 181 | 97 | 7 | 9 | 168 | 19 | 186 | 5.56e-11 | 60.5 |
MS.gene047279.t1 | MTR_7g407070 | 27.568 | 185 | 96 | 6 | 6 | 169 | 32 | 199 | 6.74e-11 | 60.5 |
MS.gene047279.t1 | MTR_0129s0050 | 28.161 | 174 | 101 | 7 | 9 | 168 | 17 | 180 | 7.00e-11 | 60.5 |
MS.gene047279.t1 | MTR_7g066850 | 27.624 | 181 | 90 | 4 | 6 | 168 | 23 | 180 | 7.13e-11 | 60.5 |
MS.gene047279.t1 | MTR_0054s0090 | 28.877 | 187 | 97 | 7 | 6 | 167 | 17 | 192 | 7.91e-11 | 60.1 |
MS.gene047279.t1 | MTR_8g033140 | 23.438 | 192 | 109 | 6 | 2 | 170 | 15 | 191 | 8.72e-11 | 60.1 |
MS.gene047279.t1 | MTR_8g012090 | 26.882 | 186 | 115 | 7 | 2 | 171 | 12 | 192 | 8.98e-11 | 59.7 |
MS.gene047279.t1 | MTR_2g078900 | 28.492 | 179 | 95 | 6 | 6 | 170 | 33 | 192 | 9.51e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047279.t1 | AT4G12560 | 30.357 | 168 | 98 | 5 | 6 | 169 | 4 | 156 | 1.30e-16 | 76.6 |
MS.gene047279.t1 | AT4G12560 | 30.357 | 168 | 98 | 5 | 6 | 169 | 4 | 156 | 1.30e-16 | 76.6 |
MS.gene047279.t1 | AT4G12560 | 30.357 | 168 | 98 | 5 | 6 | 169 | 4 | 156 | 1.30e-16 | 76.6 |
MS.gene047279.t1 | AT4G22390 | 29.940 | 167 | 98 | 5 | 7 | 169 | 5 | 156 | 2.78e-15 | 73.2 |
MS.gene047279.t1 | AT4G22390 | 29.940 | 167 | 98 | 5 | 7 | 169 | 5 | 156 | 3.10e-15 | 72.8 |
Find 51 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTCGATTTGGTAGATAT+TGG | 0.244692 | 2.1:-64079897 | None:intergenic |
GGATTTGTGTCGAAGGATTA+AGG | 0.273818 | 2.1:-64079876 | None:intergenic |
ATGTGATGTTTACGGGTGTT+AGG | 0.295789 | 2.1:-64080082 | None:intergenic |
GATGGAGAACGAGGAGTAAT+AGG | 0.320641 | 2.1:-64080124 | None:intergenic |
AGGATGCCTGAGAGCAATTT+CGG | 0.345910 | 2.1:-64080029 | None:intergenic |
AGCACCAACATTGCTCTTAT+CGG | 0.348918 | 2.1:+64079974 | MS.gene047279:CDS |
AAGGGATAATGTGATGTTTA+CGG | 0.350529 | 2.1:-64080090 | None:intergenic |
TTGAGAAATCATCTTCGATT+TGG | 0.351223 | 2.1:-64079907 | None:intergenic |
GTAATAGGAAGAGGGAGAAA+AGG | 0.363689 | 2.1:-64080109 | None:intergenic |
AACTGCTCCTTATGCGTTCA+CGG | 0.364330 | 2.1:+64080154 | MS.gene047279:CDS |
TCCTTATGCGTTCACGGCTT+CGG | 0.368899 | 2.1:+64080160 | MS.gene047279:CDS |
AGGGATAATGTGATGTTTAC+GGG | 0.384452 | 2.1:-64080089 | None:intergenic |
AGTTTATAATCGCCGGATAA+AGG | 0.385894 | 2.1:-64080190 | None:intergenic |
GAAGTTGTGAGAATCGATTA+TGG | 0.404310 | 2.1:-64079819 | None:intergenic |
TAATAGGAAGAGGGAGAAAA+GGG | 0.406280 | 2.1:-64080108 | None:intergenic |
ACCGAAGCCGTGAACGCATA+AGG | 0.407096 | 2.1:-64080161 | None:intergenic |
CCAGATTGCGATTTCGTTGG+CGG | 0.427544 | 2.1:-64080056 | None:intergenic |
AGCAATTTCGGCGTTGGAAA+CGG | 0.434717 | 2.1:-64080017 | None:intergenic |
TGTGATGTTTACGGGTGTTA+GGG | 0.440912 | 2.1:-64080081 | None:intergenic |
CCGCCAACGAAATCGCAATC+TGG | 0.442067 | 2.1:+64080056 | MS.gene047279:CDS |
GCGATTTCGTTGGCGGCGTT+AGG | 0.448985 | 2.1:-64080049 | None:intergenic |
GAACGAGGAGTAATAGGAAG+AGG | 0.470462 | 2.1:-64080118 | None:intergenic |
AAGATCTCAGCGAGTATGTC+CGG | 0.471257 | 2.1:-64079737 | None:intergenic |
CCTGAGAGCAATTTCGGCGT+TGG | 0.474684 | 2.1:-64080023 | None:intergenic |
ATAAACTCCTCCGAATCTCT+TGG | 0.483957 | 2.1:+64080206 | MS.gene047279:CDS |
GGCAGCCGACCGCCTTCCGC+CGG | 0.491056 | 2.1:+64079718 | MS.gene047279:CDS |
GCTCTTATCGGTTCATGTAA+CGG | 0.491720 | 2.1:+64079986 | MS.gene047279:CDS |
GGAAGGCGGTCGGCTGCCAT+TGG | 0.496546 | 2.1:-64079713 | None:intergenic |
AACGAGGAGTAATAGGAAGA+GGG | 0.510510 | 2.1:-64080117 | None:intergenic |
GAGAGACTAACCAAGAGATT+CGG | 0.512216 | 2.1:-64080216 | None:intergenic |
CCAACGCCGAAATTGCTCTC+AGG | 0.515843 | 2.1:+64080023 | MS.gene047279:CDS |
AAGGATTAAGGATCGATTGA+GGG | 0.525994 | 2.1:-64079864 | None:intergenic |
GAAGGATTAAGGATCGATTG+AGG | 0.535662 | 2.1:-64079865 | None:intergenic |
TCGGAGGAGTTTATAATCGC+CGG | 0.546909 | 2.1:-64080197 | None:intergenic |
CGCGTGAAAGGGTGGTTGAG+TGG | 0.547753 | 2.1:-64079947 | None:intergenic |
GTTCCAGATTGCGATTTCGT+TGG | 0.549130 | 2.1:-64080059 | None:intergenic |
AAGGAGCAGTTCATGTCAGA+TGG | 0.552669 | 2.1:-64080142 | None:intergenic |
TATGTCCGGCGGAAGGCGGT+CGG | 0.553897 | 2.1:-64079723 | None:intergenic |
TGAACCGATAAGAGCAATGT+TGG | 0.565475 | 2.1:-64079978 | None:intergenic |
TTGGTGCTGTTACGCGTGAA+AGG | 0.566043 | 2.1:-64079959 | None:intergenic |
CGAGTATGTCCGGCGGAAGG+CGG | 0.575156 | 2.1:-64079727 | None:intergenic |
AGATATTGGATTTGTGTCGA+AGG | 0.576356 | 2.1:-64079883 | None:intergenic |
GTGGTTGAGTGGAACGGCAG+TGG | 0.580674 | 2.1:-64079936 | None:intergenic |
AGACTAACCAAGAGATTCGG+AGG | 0.591475 | 2.1:-64080213 | None:intergenic |
TGGTGCTGTTACGCGTGAAA+GGG | 0.604289 | 2.1:-64079958 | None:intergenic |
CAGCGAGTATGTCCGGCGGA+AGG | 0.611523 | 2.1:-64079730 | None:intergenic |
TGCTGTTACGCGTGAAAGGG+TGG | 0.622819 | 2.1:-64079955 | None:intergenic |
GAAAGGGTGGTTGAGTGGAA+CGG | 0.623756 | 2.1:-64079942 | None:intergenic |
CGGCGTTGGAAACGGCGATG+AGG | 0.663369 | 2.1:-64080009 | None:intergenic |
TTCATGTCAGATGGAGAACG+AGG | 0.664298 | 2.1:-64080133 | None:intergenic |
ATCTCAGCGAGTATGTCCGG+CGG | 0.712333 | 2.1:-64079734 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAGTGATTTTGAAGTTGAT+CGG | - | chr2.1:64079796-64079815 | None:intergenic | 25.0% |
AAGGGATAATGTGATGTTTA+CGG | - | chr2.1:64080093-64080112 | None:intergenic | 30.0% | |
TTGAGAAATCATCTTCGATT+TGG | - | chr2.1:64079910-64079929 | None:intergenic | 30.0% | |
!! | ATCTTCGATTTGGTAGATAT+TGG | - | chr2.1:64079900-64079919 | None:intergenic | 30.0% |
!!! | ATTTTGAAGTTGATCGGAAT+CGG | - | chr2.1:64079790-64079809 | None:intergenic | 30.0% |
AAGGATTAAGGATCGATTGA+GGG | - | chr2.1:64079867-64079886 | None:intergenic | 35.0% | |
AGATATTGGATTTGTGTCGA+AGG | - | chr2.1:64079886-64079905 | None:intergenic | 35.0% | |
AGGGATAATGTGATGTTTAC+GGG | - | chr2.1:64080092-64080111 | None:intergenic | 35.0% | |
AGTTTATAATCGCCGGATAA+AGG | - | chr2.1:64080193-64080212 | None:intergenic | 35.0% | |
GAAGTTGTGAGAATCGATTA+TGG | - | chr2.1:64079822-64079841 | None:intergenic | 35.0% | |
TAATAGGAAGAGGGAGAAAA+GGG | - | chr2.1:64080111-64080130 | None:intergenic | 35.0% | |
! | AAGTGATTTTACTGGTAAGC+GGG | - | chr2.1:64079765-64079784 | None:intergenic | 35.0% |
! | AATCGGAGAAGTGATTTTAC+TGG | - | chr2.1:64079773-64079792 | None:intergenic | 35.0% |
! | ATCGATTGAGGGAATTTTTG+AGG | - | chr2.1:64079856-64079875 | None:intergenic | 35.0% |
! | GAAGTGATTTTACTGGTAAG+CGG | - | chr2.1:64079766-64079785 | None:intergenic | 35.0% |
!! | TTCGGTTTTGATCCTTTATC+CGG | + | chr2.1:64080178-64080197 | MS.gene047279:CDS | 35.0% |
AACGAGGAGTAATAGGAAGA+GGG | - | chr2.1:64080120-64080139 | None:intergenic | 40.0% | |
AGCACCAACATTGCTCTTAT+CGG | + | chr2.1:64079974-64079993 | MS.gene047279:CDS | 40.0% | |
ATAAACTCCTCCGAATCTCT+TGG | + | chr2.1:64080206-64080225 | MS.gene047279:CDS | 40.0% | |
ATGTGATGTTTACGGGTGTT+AGG | - | chr2.1:64080085-64080104 | None:intergenic | 40.0% | |
GAAGGATTAAGGATCGATTG+AGG | - | chr2.1:64079868-64079887 | None:intergenic | 40.0% | |
GAGAGACTAACCAAGAGATT+CGG | - | chr2.1:64080219-64080238 | None:intergenic | 40.0% | |
GGATTTGTGTCGAAGGATTA+AGG | - | chr2.1:64079879-64079898 | None:intergenic | 40.0% | |
GTAATAGGAAGAGGGAGAAA+AGG | - | chr2.1:64080112-64080131 | None:intergenic | 40.0% | |
TGAACCGATAAGAGCAATGT+TGG | - | chr2.1:64079981-64080000 | None:intergenic | 40.0% | |
TGTGATGTTTACGGGTGTTA+GGG | - | chr2.1:64080084-64080103 | None:intergenic | 40.0% | |
!! | GCTCTTATCGGTTCATGTAA+CGG | + | chr2.1:64079986-64080005 | MS.gene047279:CDS | 40.0% |
!!! | TGAGGGAATTTTTGAGGTGA+AGG | - | chr2.1:64079850-64079869 | None:intergenic | 40.0% |
AACTGCTCCTTATGCGTTCA+CGG | + | chr2.1:64080154-64080173 | MS.gene047279:CDS | 45.0% | |
AAGATCTCAGCGAGTATGTC+CGG | - | chr2.1:64079740-64079759 | None:intergenic | 45.0% | |
AAGGAGCAGTTCATGTCAGA+TGG | - | chr2.1:64080145-64080164 | None:intergenic | 45.0% | |
AGACTAACCAAGAGATTCGG+AGG | - | chr2.1:64080216-64080235 | None:intergenic | 45.0% | |
AGGATGCCTGAGAGCAATTT+CGG | - | chr2.1:64080032-64080051 | None:intergenic | 45.0% | |
GAACGAGGAGTAATAGGAAG+AGG | - | chr2.1:64080121-64080140 | None:intergenic | 45.0% | |
GATGGAGAACGAGGAGTAAT+AGG | - | chr2.1:64080127-64080146 | None:intergenic | 45.0% | |
GTTCCAGATTGCGATTTCGT+TGG | - | chr2.1:64080062-64080081 | None:intergenic | 45.0% | |
TCGGAGGAGTTTATAATCGC+CGG | - | chr2.1:64080200-64080219 | None:intergenic | 45.0% | |
TTCATGTCAGATGGAGAACG+AGG | - | chr2.1:64080136-64080155 | None:intergenic | 45.0% | |
! | AGCAATTTCGGCGTTGGAAA+CGG | - | chr2.1:64080020-64080039 | None:intergenic | 45.0% |
CCAGATTGCGATTTCGTTGG+CGG | - | chr2.1:64080059-64080078 | None:intergenic | 50.0% | |
GAAAGGGTGGTTGAGTGGAA+CGG | - | chr2.1:64079945-64079964 | None:intergenic | 50.0% | |
TCCTTATGCGTTCACGGCTT+CGG | + | chr2.1:64080160-64080179 | MS.gene047279:CDS | 50.0% | |
!! | TGGTGCTGTTACGCGTGAAA+GGG | - | chr2.1:64079961-64079980 | None:intergenic | 50.0% |
!! | TTGGTGCTGTTACGCGTGAA+AGG | - | chr2.1:64079962-64079981 | None:intergenic | 50.0% |
ACCGAAGCCGTGAACGCATA+AGG | - | chr2.1:64080164-64080183 | None:intergenic | 55.0% | |
ATCTCAGCGAGTATGTCCGG+CGG | - | chr2.1:64079737-64079756 | None:intergenic | 55.0% | |
CCAACGCCGAAATTGCTCTC+AGG | + | chr2.1:64080023-64080042 | MS.gene047279:CDS | 55.0% | |
CCGCCAACGAAATCGCAATC+TGG | + | chr2.1:64080056-64080075 | MS.gene047279:CDS | 55.0% | |
CCTGAGAGCAATTTCGGCGT+TGG | - | chr2.1:64080026-64080045 | None:intergenic | 55.0% | |
TGCTGTTACGCGTGAAAGGG+TGG | - | chr2.1:64079958-64079977 | None:intergenic | 55.0% | |
CGCGTGAAAGGGTGGTTGAG+TGG | - | chr2.1:64079950-64079969 | None:intergenic | 60.0% | |
GCGATTTCGTTGGCGGCGTT+AGG | - | chr2.1:64080052-64080071 | None:intergenic | 60.0% | |
GTGGTTGAGTGGAACGGCAG+TGG | - | chr2.1:64079939-64079958 | None:intergenic | 60.0% | |
CAGCGAGTATGTCCGGCGGA+AGG | - | chr2.1:64079733-64079752 | None:intergenic | 65.0% | |
CGAGTATGTCCGGCGGAAGG+CGG | - | chr2.1:64079730-64079749 | None:intergenic | 65.0% | |
TATGTCCGGCGGAAGGCGGT+CGG | - | chr2.1:64079726-64079745 | None:intergenic | 65.0% | |
! | CGGCGTTGGAAACGGCGATG+AGG | - | chr2.1:64080012-64080031 | None:intergenic | 65.0% |
! | GGCAGCCGACCGCCTTCCGC+CGG | + | chr2.1:64079718-64079737 | MS.gene047279:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 64079716 | 64080258 | 64079716 | ID=MS.gene047279 |
chr2.1 | mRNA | 64079716 | 64080258 | 64079716 | ID=MS.gene047279.t1;Parent=MS.gene047279 |
chr2.1 | exon | 64079716 | 64080258 | 64079716 | ID=MS.gene047279.t1.exon1;Parent=MS.gene047279.t1 |
chr2.1 | CDS | 64079716 | 64080258 | 64079716 | ID=cds.MS.gene047279.t1;Parent=MS.gene047279.t1 |
Gene Sequence |
Protein sequence |