AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88416


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88416.t1 MTR_4g117850 55.875 383 127 7 1 351 1 373 1.46e-125 365
MS.gene88416.t1 MTR_3g103020 53.786 383 137 8 1 353 1 373 1.27e-123 361
MS.gene88416.t1 MTR_4g117770 54.424 373 125 6 14 353 2 362 8.01e-119 348
MS.gene88416.t1 MTR_4g117810 54.424 373 125 6 14 353 2 362 8.01e-119 348
MS.gene88416.t1 MTR_4g117780 52.279 373 133 7 14 353 2 362 9.75e-119 348
MS.gene88416.t1 MTR_4g109270 56.164 365 113 11 23 353 8 359 6.21e-114 335
MS.gene88416.t1 MTR_4g116330 49.610 385 156 8 5 358 3 380 7.11e-113 333
MS.gene88416.t1 MTR_3g034180 50.886 395 141 12 2 355 104 486 7.51e-112 335
MS.gene88416.t1 MTR_4g023090 49.354 387 135 11 14 353 7 379 2.56e-106 317
MS.gene88416.t1 MTR_4g021785 50.964 363 133 7 19 353 5 350 1.12e-105 314
MS.gene88416.t1 MTR_3g034160 51.187 379 138 8 16 355 2 372 5.78e-105 313
MS.gene88416.t1 MTR_3g034130 50.000 362 135 8 22 344 8 362 2.65e-103 309
MS.gene88416.t1 MTR_6g060650 52.973 370 126 9 22 352 7 367 7.51e-103 308
MS.gene88416.t1 MTR_4g116330 50.696 359 152 10 5 358 3 341 6.28e-102 304
MS.gene88416.t1 MTR_4g109280 50.689 363 139 8 17 351 2 352 1.55e-100 301
MS.gene88416.t1 MTR_4g094365 50.137 365 135 10 22 352 7 358 3.07e-100 301
MS.gene88416.t1 MTR_8g433040 49.728 368 143 10 12 353 8 359 6.71e-100 300
MS.gene88416.t1 MTR_8g032380 49.728 368 143 10 12 353 8 359 6.71e-100 300
MS.gene88416.t1 MTR_4g122850 50.696 359 129 13 34 354 12 360 2.95e-99 299
MS.gene88416.t1 MTR_4g023080 49.864 369 133 10 16 353 2 349 1.23e-98 296
MS.gene88416.t1 MTR_4g023070 46.381 373 148 10 23 353 3 365 7.27e-96 290
MS.gene88416.t1 MTR_4g023380 48.101 395 119 12 14 352 7 371 9.31e-93 282
MS.gene88416.t1 MTR_4g118380 49.722 360 122 10 21 329 6 357 3.86e-92 280
MS.gene88416.t1 MTR_4g023440 49.284 349 148 10 9 353 4 327 8.65e-92 278
MS.gene88416.t1 MTR_4g023120 44.744 371 157 8 23 353 3 365 1.84e-91 278
MS.gene88416.t1 MTR_5g070130 46.667 375 158 7 14 352 2 370 4.41e-91 278
MS.gene88416.t1 MTR_5g070080 45.526 380 153 7 22 354 9 381 1.35e-90 277
MS.gene88416.t1 MTR_1g055135 45.767 378 158 11 13 353 3 370 4.75e-90 275
MS.gene88416.t1 MTR_5g070088 43.947 380 162 7 22 354 6 381 6.03e-89 273
MS.gene88416.t1 MTR_5g097210 47.340 376 148 14 15 356 2 361 7.77e-89 272
MS.gene88416.t1 MTR_8g032390 45.889 377 135 11 12 354 30 371 4.55e-88 270
MS.gene88416.t1 MTR_4g117720 46.196 368 119 10 22 354 50 373 4.65e-85 262
MS.gene88416.t1 MTR_4g023130 46.341 369 105 9 16 353 2 308 5.69e-85 260
MS.gene88416.t1 MTR_8g040935 65.672 201 39 1 183 353 3 203 1.44e-84 255
MS.gene88416.t1 MTR_4g023190 47.170 371 146 10 15 353 2 354 2.88e-84 259
MS.gene88416.t1 MTR_4g117870 52.899 276 113 7 80 353 2 262 9.25e-83 253
MS.gene88416.t1 MTR_4g121580 46.893 354 153 12 14 348 2 339 5.46e-81 252
MS.gene88416.t1 MTR_4g023150 45.553 371 153 9 15 353 2 355 6.11e-80 248
MS.gene88416.t1 MTR_4g023200 46.361 371 150 9 15 353 2 355 1.90e-79 247
MS.gene88416.t1 MTR_1g055165 46.450 338 150 9 18 353 5 313 2.74e-78 243
MS.gene88416.t1 MTR_4g117750 44.865 370 147 10 22 352 2 353 2.39e-77 246
MS.gene88416.t1 MTR_4g117750 63.889 108 37 1 246 353 373 478 7.69e-36 136
MS.gene88416.t1 MTR_8g433030 42.133 375 119 11 12 354 30 338 7.06e-72 227
MS.gene88416.t1 MTR_8g013010 46.595 279 113 7 5 255 39 309 2.45e-65 209
MS.gene88416.t1 MTR_7g117720 40.230 348 122 11 15 353 2 272 1.56e-57 188
MS.gene88416.t1 MTR_4g118370 47.863 234 99 6 136 355 33 257 4.55e-57 186
MS.gene88416.t1 MTR_1g055195 42.173 313 116 12 85 355 186 475 7.26e-54 184
MS.gene88416.t1 MTR_4g116340 45.798 238 98 8 1 229 12 227 1.02e-51 172
MS.gene88416.t1 MTR_4g116320 49.302 215 74 5 168 352 43 252 6.28e-51 171
MS.gene88416.t1 MTR_4g118400 40.541 296 105 10 94 352 33 294 2.08e-50 170
MS.gene88416.t1 MTR_7g079370 38.286 350 152 14 52 352 16 350 1.16e-48 167
MS.gene88416.t1 MTR_4g114700 43.777 233 101 8 124 349 9 218 3.33e-45 155
MS.gene88416.t1 MTR_7g079400 37.061 313 145 11 82 354 33 333 6.59e-43 152
MS.gene88416.t1 MTR_2g048580 33.244 373 168 17 22 354 7 338 1.31e-40 146
MS.gene88416.t1 MTR_4g117530 42.727 220 105 5 141 355 47 250 3.12e-40 142
MS.gene88416.t1 MTR_4g118360 55.385 130 52 3 231 358 1 126 5.15e-38 132
MS.gene88416.t1 MTR_8g102520 34.337 332 150 12 57 355 23 319 2.18e-37 137
MS.gene88416.t1 MTR_4g109290 49.080 163 45 4 19 177 5 133 6.79e-37 132
MS.gene88416.t1 MTR_6g463430 41.872 203 80 5 182 353 2 197 1.87e-34 126
MS.gene88416.t1 MTR_5g069120 44.872 156 75 4 34 181 2 154 7.02e-33 121
MS.gene88416.t1 MTR_1g055250 39.056 233 97 9 147 345 32 253 1.62e-31 121
MS.gene88416.t1 MTR_5g023000 61.053 95 35 1 259 353 2 94 6.77e-31 113
MS.gene88416.t1 MTR_1g055175 55.118 127 50 5 228 352 74 195 7.66e-31 116
MS.gene88416.t1 MTR_4g122860 44.099 161 76 5 201 352 159 314 3.12e-29 115
MS.gene88416.t1 MTR_4g122860 60.317 63 23 1 14 76 61 121 1.87e-12 67.8
MS.gene88416.t1 MTR_1g094210 28.650 363 202 11 3 328 37 379 4.59e-29 116
MS.gene88416.t1 MTR_2g021150 28.184 369 216 14 20 350 11 368 1.16e-28 114
MS.gene88416.t1 MTR_1g094210 27.792 385 218 12 3 350 37 398 3.25e-28 114
MS.gene88416.t1 MTR_4g117430 44.375 160 51 4 124 255 3 152 6.24e-28 107
MS.gene88416.t1 MTR_1g097490 28.451 355 214 11 23 350 49 390 1.45e-27 112
MS.gene88416.t1 MTR_4g023430 63.043 92 32 2 14 105 33 122 1.10e-26 105
MS.gene88416.t1 MTR_4g023430 48.515 101 47 2 256 353 119 217 1.55e-19 86.7
MS.gene88416.t1 MTR_7g079420 36.000 250 130 11 123 355 905 1141 1.92e-26 111
MS.gene88416.t1 MTR_5g022420 28.280 343 207 11 20 338 24 351 1.92e-26 108
MS.gene88416.t1 MTR_8g101580 27.100 369 221 13 17 350 39 394 5.77e-25 104
MS.gene88416.t1 MTR_4g108820 29.126 309 151 11 8 290 27 293 6.70e-25 103
MS.gene88416.t1 MTR_4g107820 28.481 316 189 11 3 290 16 322 3.41e-24 102
MS.gene88416.t1 MTR_4g107780 28.481 316 189 11 3 290 16 322 3.41e-24 102
MS.gene88416.t1 MTR_4g107820 28.481 316 189 11 3 290 16 322 4.22e-24 102
MS.gene88416.t1 MTR_4g107780 28.481 316 189 11 3 290 16 322 4.34e-24 102
MS.gene88416.t1 MTR_1g097560 29.787 329 192 14 23 324 36 352 7.55e-24 101
MS.gene88416.t1 MTR_4g055060 31.270 307 154 14 18 281 25 317 8.41e-24 101
MS.gene88416.t1 MTR_1g097330 30.588 340 184 16 1 307 1 321 3.47e-23 100
MS.gene88416.t1 MTR_3g006670 29.642 307 167 10 20 290 46 339 1.39e-22 98.2
MS.gene88416.t1 MTR_5g057690 29.032 310 163 12 19 296 45 329 2.06e-22 97.4
MS.gene88416.t1 MTR_3g007360 29.641 334 169 14 26 312 55 369 2.80e-22 97.4
MS.gene88416.t1 MTR_3g007410 30.094 319 163 13 26 303 55 354 9.55e-22 95.9
MS.gene88416.t1 MTR_3g007330 29.032 310 171 10 20 296 45 338 1.25e-21 95.5
MS.gene88416.t1 MTR_3g014540 28.274 336 173 12 9 293 5 323 2.54e-21 94.4
MS.gene88416.t1 MTR_3g036430 27.027 370 189 16 19 350 16 342 3.20e-21 93.6
MS.gene88416.t1 MTR_2g021155 28.990 307 167 10 17 286 30 322 7.14e-21 94.7
MS.gene88416.t1 MTR_8g073550 36.471 170 90 5 20 179 27 188 9.47e-21 90.1
MS.gene88416.t1 MTR_2g055970 27.467 375 224 16 11 350 199 560 2.48e-20 92.8
MS.gene88416.t1 MTR_5g057790 28.349 321 161 14 19 296 45 339 1.58e-19 89.4
MS.gene88416.t1 MTR_7g079450 41.406 128 68 4 228 355 14 134 1.80e-19 84.0
MS.gene88416.t1 MTR_8g467140 28.707 317 182 11 2 286 14 318 2.25e-19 88.2
MS.gene88416.t1 MTR_1g054575 28.571 301 168 13 18 286 47 332 4.07e-19 89.0
MS.gene88416.t1 MTR_2g046920 28.525 305 169 13 21 290 22 312 1.13e-18 86.7
MS.gene88416.t1 MTR_3g010390 28.710 310 165 11 20 281 30 331 1.38e-18 86.7
MS.gene88416.t1 MTR_3g009310 27.365 296 175 9 17 281 36 322 1.99e-18 86.3
MS.gene88416.t1 MTR_2g029990 27.945 365 207 19 26 350 54 402 2.06e-18 86.3
MS.gene88416.t1 MTR_6g017270 26.648 364 205 14 20 350 6 340 2.27e-18 85.5
MS.gene88416.t1 MTR_2g426020 24.685 397 203 15 23 356 6 369 2.38e-18 85.9
MS.gene88416.t1 MTR_2g046830 27.667 300 178 11 21 290 23 313 2.52e-18 85.9
MS.gene88416.t1 MTR_3g013770 35.519 183 89 8 5 174 22 188 2.58e-18 85.9
MS.gene88416.t1 MTR_5g008530 70.690 58 15 1 23 80 18 73 2.97e-18 78.6
MS.gene88416.t1 MTR_4g061340 28.528 326 178 12 7 292 10 320 3.21e-18 85.5
MS.gene88416.t1 MTR_5g057020 27.869 305 168 13 19 296 45 324 3.27e-18 85.1
MS.gene88416.t1 MTR_8g013005 67.857 56 16 1 298 353 1 54 6.27e-18 77.4
MS.gene88416.t1 MTR_3g010430 26.198 313 178 11 15 291 28 323 7.35e-18 84.7
MS.gene88416.t1 MTR_3g014570 27.164 335 192 12 1 294 1 324 7.46e-18 84.3
MS.gene88416.t1 MTR_6g021880 25.497 302 187 8 33 298 30 329 1.42e-17 83.6
MS.gene88416.t1 MTR_3g030250 27.152 302 161 11 20 286 34 311 2.04e-17 83.2
MS.gene88416.t1 MTR_1g050542 26.460 291 173 10 18 280 53 330 2.66e-17 82.8
MS.gene88416.t1 MTR_3g083640 28.032 371 207 17 20 350 52 402 2.99e-17 82.8
MS.gene88416.t1 MTR_5g011200 26.722 363 204 15 9 335 6 342 3.07e-17 82.4
MS.gene88416.t1 MTR_7g067680 27.329 322 170 12 3 286 21 316 4.02e-17 82.4
MS.gene88416.t1 MTR_3g036290 29.932 294 169 15 21 292 20 298 5.12e-17 81.6
MS.gene88416.t1 MTR_1g055145 53.488 86 36 2 35 120 45 126 5.85e-17 80.5
MS.gene88416.t1 MTR_7g035295 26.772 381 215 14 20 350 13 379 5.98e-17 81.6
MS.gene88416.t1 MTR_3g010520 27.707 314 174 13 1 286 3 291 6.35e-17 81.3
MS.gene88416.t1 MTR_3g010590 29.066 289 170 11 20 286 36 311 6.39e-17 81.6
MS.gene88416.t1 MTR_2g046900 28.065 310 172 12 21 290 26 324 6.86e-17 81.6
MS.gene88416.t1 MTR_5g069760 24.479 384 218 12 22 351 5 370 9.68e-17 80.9
MS.gene88416.t1 MTR_5g057710 28.125 320 159 15 19 294 45 337 1.01e-16 81.3
MS.gene88416.t1 MTR_1g055200 51.899 79 34 2 120 197 5 80 1.11e-16 75.5
MS.gene88416.t1 MTR_5g057643 31.683 202 110 8 19 208 45 230 1.21e-16 79.3
MS.gene88416.t1 MTR_7g407070 27.597 308 174 9 20 281 29 333 1.52e-16 80.5
MS.gene88416.t1 MTR_6g053240 24.458 323 182 11 20 297 25 330 1.53e-16 80.5
MS.gene88416.t1 MTR_4g129190 33.503 197 104 6 23 207 6 187 2.16e-16 80.1
MS.gene88416.t1 MTR_3g011100 35.465 172 92 7 20 179 232 396 2.50e-16 80.5
MS.gene88416.t1 MTR_3g009250 34.872 195 106 7 20 207 38 218 4.31e-16 77.4
MS.gene88416.t1 MTR_3g006500 26.720 378 222 13 13 350 7 369 4.53e-16 79.0
MS.gene88416.t1 MTR_3g096250 30.961 281 148 14 20 286 44 292 6.53e-16 78.2
MS.gene88416.t1 MTR_0464s0020 34.685 222 94 8 19 207 19 222 7.35e-16 78.6
MS.gene88416.t1 MTR_3g013740 27.010 311 181 11 23 292 44 349 8.25e-16 78.6
MS.gene88416.t1 MTR_4g037465 26.810 373 197 14 4 316 2 358 9.29e-16 78.2
MS.gene88416.t1 MTR_5g023570 39.474 114 62 3 18 131 32 138 9.46e-16 73.9
MS.gene88416.t1 MTR_3g023930 27.425 299 191 10 2 286 13 299 1.24e-15 77.8
MS.gene88416.t1 MTR_8g062660 26.688 311 175 11 18 286 17 316 1.28e-15 78.6
MS.gene88416.t1 MTR_6g053260 29.282 181 121 3 7 181 321 500 1.28e-15 78.6
MS.gene88416.t1 MTR_0044s0300 27.687 307 161 13 20 286 35 320 1.47e-15 77.8
MS.gene88416.t1 MTR_2g078900 27.451 306 162 14 20 286 30 314 2.07e-15 77.0
MS.gene88416.t1 MTR_7g056170 24.880 418 229 19 4 350 56 459 2.16e-15 77.4
MS.gene88416.t1 MTR_0097s0030 27.697 343 169 15 23 307 14 335 2.17e-15 77.0
MS.gene88416.t1 MTR_2g047240 27.697 343 169 15 23 307 14 335 2.17e-15 77.0
MS.gene88416.t1 MTR_6g086825 23.457 405 226 13 22 355 69 460 2.24e-15 77.4
MS.gene88416.t1 MTR_3g010870 25.163 306 173 11 20 289 34 319 2.25e-15 77.0
MS.gene88416.t1 MTR_5g007610 26.183 317 179 10 18 289 36 342 2.33e-15 77.0
MS.gene88416.t1 MTR_2g021190 26.316 304 179 11 18 286 16 309 2.40e-15 77.0
MS.gene88416.t1 MTR_2g047892 24.757 412 218 20 10 350 6 396 2.74e-15 77.0
MS.gene88416.t1 MTR_1g114700 28.000 300 176 11 20 286 26 318 2.75e-15 76.6
MS.gene88416.t1 MTR_6g079810 23.317 416 238 13 11 355 58 463 3.22e-15 77.0
MS.gene88416.t1 MTR_7g070440 28.025 314 158 15 22 283 6 303 3.53e-15 76.3
MS.gene88416.t1 MTR_3g009240 35.976 164 94 5 20 178 33 190 4.19e-15 76.3
MS.gene88416.t1 MTR_3g030350 25.199 377 218 14 20 350 32 390 5.29e-15 75.9
MS.gene88416.t1 MTR_4g024890 28.218 202 131 5 19 213 6 200 5.36e-15 75.9
MS.gene88416.t1 MTR_3g011060 30.622 209 116 6 20 207 25 225 5.91e-15 75.9
MS.gene88416.t1 MTR_3g006570 25.705 319 170 11 15 291 13 306 7.08e-15 75.5
MS.gene88416.t1 MTR_2g047832 27.019 322 172 15 21 290 27 337 8.56e-15 75.5
MS.gene88416.t1 MTR_3g058470 27.532 316 179 13 20 307 34 327 9.61e-15 75.1
MS.gene88416.t1 MTR_3g072470 33.971 209 99 7 23 207 19 212 1.00e-14 75.1
MS.gene88416.t1 MTR_5g057040 28.750 240 121 11 19 248 45 244 1.03e-14 75.9
MS.gene88416.t1 MTR_7g055987 27.356 329 174 12 26 305 23 335 1.09e-14 74.7
MS.gene88416.t1 MTR_6g065980 27.703 296 174 10 21 293 14 292 1.18e-14 74.7
MS.gene88416.t1 MTR_3g009260 36.145 166 90 5 20 178 38 194 1.28e-14 74.7
MS.gene88416.t1 MTR_1g055070 34.426 183 93 8 15 177 41 216 1.29e-14 74.7
MS.gene88416.t1 MTR_7g445890 33.333 198 93 7 23 209 16 185 1.29e-14 74.7
MS.gene88416.t1 MTR_3g007430 28.939 311 154 14 26 292 46 333 1.36e-14 74.7
MS.gene88416.t1 MTR_0115s0020 27.751 209 136 7 19 213 6 213 1.48e-14 74.7
MS.gene88416.t1 MTR_5g069930 30.151 199 114 5 22 207 5 191 1.60e-14 74.3
MS.gene88416.t1 MTR_2g437110 26.031 388 230 16 13 350 12 392 1.72e-14 74.7
MS.gene88416.t1 MTR_3g007270 27.095 358 186 13 19 329 43 372 1.74e-14 74.7
MS.gene88416.t1 MTR_3g030240 24.116 311 186 10 4 286 21 309 1.76e-14 74.3
MS.gene88416.t1 MTR_8g098830 41.129 124 55 6 214 325 77 194 1.95e-14 72.4
MS.gene88416.t1 MTR_1g056710 34.659 176 89 8 11 176 25 184 1.98e-14 74.3
MS.gene88416.t1 MTR_3g011650 34.184 196 107 8 20 207 76 257 2.09e-14 73.2
MS.gene88416.t1 MTR_7g028660 26.606 327 181 11 22 298 10 327 2.10e-14 73.9
MS.gene88416.t1 MTR_1g115185 26.452 310 189 12 9 286 25 327 2.16e-14 74.3
MS.gene88416.t1 MTR_0064s0160 26.316 342 190 16 6 290 28 364 2.18e-14 74.3
MS.gene88416.t1 MTR_3g030330 27.184 309 190 10 1 286 1 297 2.23e-14 73.9
MS.gene88416.t1 MTR_1g015740 25.938 320 161 11 23 314 8 279 2.26e-14 73.6
MS.gene88416.t1 MTR_7g060940 30.000 210 124 6 8 208 7 202 2.81e-14 73.9
MS.gene88416.t1 MTR_5g068040 29.004 231 127 9 10 228 2 207 4.09e-14 73.2
MS.gene88416.t1 MTR_6g007135 25.081 307 176 12 23 286 26 321 4.20e-14 73.2
MS.gene88416.t1 MTR_2g078850 28.859 298 159 10 26 286 33 314 5.41e-14 72.8
MS.gene88416.t1 MTR_7g061060 30.435 207 120 5 22 214 12 208 5.63e-14 72.8
MS.gene88416.t1 MTR_3g010440 33.571 140 76 4 20 150 23 154 6.37e-14 72.4
MS.gene88416.t1 MTR_4g030830 27.451 204 118 5 23 209 9 199 6.38e-14 72.8
MS.gene88416.t1 MTR_4g080200 32.544 169 83 5 23 180 3 151 7.23e-14 72.4
MS.gene88416.t1 MTR_7g055870 27.154 383 167 17 23 307 13 381 8.43e-14 72.4
MS.gene88416.t1 MTR_3g011020 27.576 330 146 14 20 295 25 315 8.80e-14 72.0
MS.gene88416.t1 MTR_6g034830 33.824 136 72 3 1 136 1 118 9.88e-14 67.4
MS.gene88416.t1 MTR_3g058480 32.432 185 92 6 20 181 36 210 1.00e-13 71.6
MS.gene88416.t1 MTR_2g021210 26.190 294 187 8 15 286 76 361 1.31e-13 72.0
MS.gene88416.t1 MTR_2g426070 25.970 335 183 9 26 304 9 334 1.43e-13 71.6
MS.gene88416.t1 MTR_5g046260 26.715 277 160 11 20 281 1 249 1.67e-13 70.5
MS.gene88416.t1 MTR_7g061050 25.545 321 179 8 22 294 12 320 1.69e-13 71.2
MS.gene88416.t1 MTR_3g007300 27.213 305 153 13 20 295 46 310 2.08e-13 70.9
MS.gene88416.t1 MTR_4g030760 24.425 348 178 12 17 307 67 386 2.86e-13 70.9
MS.gene88416.t1 MTR_7g061090 27.803 223 127 7 11 210 10 221 3.06e-13 70.9
MS.gene88416.t1 MTR_7g056290 30.093 216 99 6 23 207 22 216 3.18e-13 70.9
MS.gene88416.t1 MTR_3g437520 33.632 223 95 9 19 207 19 222 3.26e-13 70.9
MS.gene88416.t1 MTR_3g006530 30.732 205 121 7 19 208 36 234 3.31e-13 70.5
MS.gene88416.t1 MTR_3g024110 28.502 207 125 10 20 218 98 289 3.73e-13 70.5
MS.gene88416.t1 MTR_3g010620 25.676 296 169 10 20 286 33 306 4.00e-13 70.5
MS.gene88416.t1 MTR_6g013270 26.490 302 177 11 21 286 27 319 4.17e-13 70.1
MS.gene88416.t1 MTR_3g436150 27.961 304 172 9 20 281 29 327 4.37e-13 70.1
MS.gene88416.t1 MTR_7g052150 28.182 220 121 6 7 208 6 206 4.64e-13 70.1
MS.gene88416.t1 MTR_6g004660 29.310 174 104 5 23 181 16 185 6.53e-13 69.7
MS.gene88416.t1 MTR_1g115160 25.000 292 178 11 22 286 21 298 6.78e-13 69.3
MS.gene88416.t1 MTR_6g048140 28.571 308 166 13 19 286 35 328 7.56e-13 69.7
MS.gene88416.t1 MTR_7g056503 24.402 418 219 17 6 350 4 397 9.13e-13 69.3
MS.gene88416.t1 MTR_5g048160 28.293 205 132 7 23 213 4 207 9.40e-13 69.3
MS.gene88416.t1 MTR_5g043160 23.757 362 189 12 24 304 51 406 9.96e-13 69.3
MS.gene88416.t1 MTR_1g088120 26.769 325 165 13 22 283 9 323 1.03e-12 69.3
MS.gene88416.t1 MTR_4g028660 23.659 410 228 15 10 351 3 395 1.05e-12 68.9
MS.gene88416.t1 MTR_4g027450 23.659 410 228 15 10 351 3 395 1.05e-12 68.9
MS.gene88416.t1 MTR_3g464470 24.510 408 195 15 22 350 6 379 1.05e-12 68.9
MS.gene88416.t1 MTR_6g016285 24.841 314 179 8 26 285 24 334 1.26e-12 68.9
MS.gene88416.t1 MTR_7g077970 25.294 340 185 11 20 296 4 337 1.31e-12 68.9
MS.gene88416.t1 MTR_1g054725 30.890 191 122 6 9 193 6 192 1.32e-12 68.6
MS.gene88416.t1 MTR_3g024150 28.179 291 168 12 26 286 38 317 1.65e-12 68.6
MS.gene88416.t1 MTR_7g056760 25.123 406 234 15 8 350 6 404 1.66e-12 68.6
MS.gene88416.t1 MTR_7g056200 23.848 369 180 14 4 307 3 335 1.69e-12 68.6
MS.gene88416.t1 MTR_6g017280 30.049 203 124 6 20 209 6 203 1.88e-12 68.2
MS.gene88416.t1 MTR_2g021252 25.632 277 185 9 26 286 50 321 1.95e-12 68.2
MS.gene88416.t1 MTR_3g036335 25.161 310 189 11 20 296 38 337 2.06e-12 68.2
MS.gene88416.t1 MTR_2g461450 29.665 209 112 7 19 216 14 198 2.29e-12 67.8
MS.gene88416.t1 MTR_0054s0090 22.963 405 227 17 22 355 16 406 2.42e-12 68.2
MS.gene88416.t1 MTR_6g042600 35.795 176 73 8 13 177 24 170 2.71e-12 67.8
MS.gene88416.t1 MTR_3g024040 29.110 292 164 15 30 294 38 313 2.85e-12 67.8
MS.gene88416.t1 MTR_3g010870 29.310 174 101 5 20 180 34 198 3.09e-12 67.0
MS.gene88416.t1 MTR_7g056003 32.673 202 103 8 23 207 15 200 4.35e-12 67.4
MS.gene88416.t1 MTR_4g024870 28.571 196 127 5 26 213 47 237 5.34e-12 67.0
MS.gene88416.t1 MTR_4g030110 26.596 188 122 5 1 177 8 190 7.32e-12 66.6
MS.gene88416.t1 MTR_1g442850 29.469 207 114 9 20 208 2 194 8.83e-12 66.2
MS.gene88416.t1 MTR_7g062060 30.000 220 112 8 22 207 11 222 9.19e-12 66.2
MS.gene88416.t1 MTR_0128s0070 25.916 382 188 13 12 320 9 368 9.52e-12 66.2
MS.gene88416.t1 MTR_2g047200 28.177 181 112 5 12 177 9 186 1.20e-11 65.9
MS.gene88416.t1 MTR_7g050520 27.308 260 147 9 5 244 2 239 1.37e-11 65.5
MS.gene88416.t1 MTR_3g023940 28.750 160 108 3 20 174 31 189 1.38e-11 65.5
MS.gene88416.t1 MTR_8g066440 27.488 211 140 3 10 208 10 219 1.52e-11 65.5
MS.gene88416.t1 MTR_7g013590 24.845 322 199 8 2 286 10 325 1.73e-11 65.5
MS.gene88416.t1 MTR_7g070880 23.097 381 204 13 7 307 4 375 2.01e-11 65.1
MS.gene88416.t1 MTR_3g010970 23.944 284 180 10 26 286 51 321 2.13e-11 65.1
MS.gene88416.t1 MTR_7g057270 29.500 200 120 7 23 208 26 218 2.18e-11 65.1
MS.gene88416.t1 MTR_7g070830 29.384 211 116 7 26 208 24 229 2.57e-11 65.1
MS.gene88416.t1 MTR_7g022670 35.000 140 72 6 7 135 10 141 2.87e-11 64.3
MS.gene88416.t1 MTR_2g426060 23.684 342 187 12 23 304 6 333 2.95e-11 64.7
MS.gene88416.t1 MTR_7g022600 28.879 232 127 9 5 208 2 223 3.06e-11 64.7
MS.gene88416.t1 MTR_7g066850 23.645 406 220 16 23 356 23 410 3.19e-11 64.7
MS.gene88416.t1 MTR_7g055850 31.081 222 107 10 23 207 13 225 3.20e-11 63.9
MS.gene88416.t1 MTR_8g012090 24.841 314 179 14 31 306 24 318 3.88e-11 63.9
MS.gene88416.t1 MTR_0128s0010 28.440 218 126 7 9 207 7 213 4.15e-11 64.3
MS.gene88416.t1 MTR_0242s0060 29.508 183 107 5 22 182 8 190 5.02e-11 63.9
MS.gene88416.t1 MTR_0242s0040 29.508 183 107 5 22 182 8 190 5.02e-11 63.9
MS.gene88416.t1 MTR_3g058440 30.814 172 94 6 23 177 35 198 5.44e-11 63.2
MS.gene88416.t1 MTR_7g055977 24.926 337 198 10 22 307 6 338 6.29e-11 63.5
MS.gene88416.t1 MTR_2g043410 30.493 223 93 10 19 207 18 212 6.33e-11 63.5
MS.gene88416.t1 MTR_5g046300 24.573 293 176 10 20 281 1 279 6.37e-11 63.5
MS.gene88416.t1 MTR_5g046290 24.573 293 176 10 20 281 1 279 6.37e-11 63.5
MS.gene88416.t1 MTR_6g027910 24.437 311 188 10 19 286 5 311 6.41e-11 63.5
MS.gene88416.t1 MTR_7g007300 25.806 279 184 8 26 286 106 379 7.93e-11 63.5
MS.gene88416.t1 MTR_1g061330 23.306 369 227 15 23 351 4 356 8.19e-11 63.2
MS.gene88416.t1 MTR_7g050490 29.268 205 103 7 22 207 7 188 9.05e-11 60.8
MS.gene88416.t1 MTR_7g056797 27.632 228 139 7 2 212 4 222 9.07e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88416.t1 AT3G06240 26.179 424 217 18 3 350 16 419 5.70e-19 88.2
MS.gene88416.t1 AT3G23880 28.205 312 153 13 23 286 14 302 4.83e-18 84.7
MS.gene88416.t1 AT1G33530 28.426 197 101 7 3 184 76 247 3.24e-13 70.9
MS.gene88416.t1 AT3G10240 29.208 202 123 9 26 220 30 218 1.49e-12 68.6
MS.gene88416.t1 AT5G49610 31.068 206 101 10 26 210 12 197 1.87e-12 68.2
MS.gene88416.t1 AT4G19940 24.670 227 154 6 15 227 27 250 2.10e-11 65.1
MS.gene88416.t1 AT2G02030 28.030 132 93 2 22 151 38 169 2.98e-11 64.3
MS.gene88416.t1 AT4G21240 27.014 211 137 6 3 210 19 215 6.44e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCCATTGGAAGAGTTTA+TGG 0.136678 8.3:-57195448 MS.gene88416:CDS
TTAATAAAAGATTTGAAATA+TGG 0.168954 8.3:-57195649 MS.gene88416:CDS
AATACAAAGTGAACTCTTCT+TGG 0.277384 8.3:-57195616 MS.gene88416:CDS
GATTGTGGTTTGTGGGTCTT+TGG 0.287635 8.3:-57195704 MS.gene88416:CDS
CGTCTAATTTCGAACCATTA+GGG 0.290016 8.3:+57196079 None:intergenic
ACAAAGAGTGGTGATATTAT+TGG 0.305047 8.3:-57195530 MS.gene88416:CDS
TTAGACGCTGAATATTTCTA+TGG 0.312051 8.3:-57196063 MS.gene88416:CDS
AAAGTACCTTTGTCCCCTAA+TGG 0.347878 8.3:-57196093 MS.gene88416:CDS
GCGTCTAATTTCGAACCATT+AGG 0.357055 8.3:+57196078 None:intergenic
TAAGCGCACAGAGAAGAAAA+AGG 0.357486 8.3:-57196502 MS.gene88416:CDS
AGATGATAATTATTCGTGTT+TGG 0.359782 8.3:-57195971 MS.gene88416:CDS
ACACGAATAATTATCATCTA+AGG 0.365836 8.3:+57195975 None:intergenic
CTCCCATTGGAAGAGTTTAT+GGG 0.379547 8.3:-57195447 MS.gene88416:CDS
CGAGTTGGAATATGATCAAT+AGG 0.384670 8.3:+57195575 None:intergenic
CTCCCTGGTGCAAGCTTAAG+AGG 0.385370 8.3:-57195380 MS.gene88416:CDS
TATTAATTCATGAGACAGAT+AGG 0.394740 8.3:+57196470 None:intergenic
TAATAAAAGATTTGAAATAT+GGG 0.407398 8.3:-57195648 MS.gene88416:CDS
AAATGTGAGTTTGCGAAGTA+AGG 0.411816 8.3:+57196363 None:intergenic
CCAAGTAATCATCTGTTAAC+TGG 0.412624 8.3:+57196028 None:intergenic
TCAAATGCGTTTGTAAGTCT+TGG 0.413204 8.3:-57196404 MS.gene88416:CDS
ATTATTCAAACCTCTACCTA+TGG 0.422618 8.3:-57196140 MS.gene88416:CDS
ATAGGTAGAGGTTTGAATAA+TGG 0.431040 8.3:+57196142 None:intergenic
AACAAATGGTGGTATTGAAT+TGG 0.431919 8.3:-57195507 MS.gene88416:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.434682 8.3:-57195395 MS.gene88416:CDS
TTATCATGTTCAAAATCATC+TGG 0.436301 8.3:+57195731 None:intergenic
ATTATAGAGACACCCTGCTT+TGG 0.436325 8.3:+57195867 None:intergenic
CCAGTTAACAGATGATTACT+TGG 0.444298 8.3:-57196028 MS.gene88416:CDS
CACTCTTTGTACAACACAAT+GGG 0.454210 8.3:+57195543 None:intergenic
TTCGATGATAAGACCAAAGC+AGG 0.464416 8.3:-57195880 MS.gene88416:CDS
TCATCGAAGGTACTCGTATG+AGG 0.466559 8.3:+57195895 None:intergenic
TAATGGTGATTGTGGTTTGT+GGG 0.469273 8.3:-57195711 MS.gene88416:CDS
TTTAAACGAAAGGAAACTGT+TGG 0.481616 8.3:-57195768 MS.gene88416:intron
GGTGATATTATTGGAACAAA+TGG 0.482891 8.3:-57195521 MS.gene88416:CDS
ATAATGGTGATTGTGGTTTG+TGG 0.501634 8.3:-57195712 MS.gene88416:CDS
TCAAATCCTAGAGAGGTTAC+CGG 0.506318 8.3:-57196445 MS.gene88416:CDS
TGTTAGAGCATTCCTCCCAT+TGG 0.510718 8.3:-57195460 MS.gene88416:CDS
ACCCCATAAACTCTTCCAAT+GGG 0.514974 8.3:+57195445 None:intergenic
TTAGCAGCATCGCTTGATGA+TGG 0.520232 8.3:-57196261 MS.gene88416:CDS
TGGTGAAGTATGATGAGAAT+GGG 0.523627 8.3:-57195487 MS.gene88416:CDS
CATCCTCTTAAGCTTGCACC+AGG 0.525543 8.3:+57195377 None:intergenic
GAACATGATAATGGTGATTG+TGG 0.526785 8.3:-57195719 MS.gene88416:CDS
CGAATAATTATCATCTAAGG+TGG 0.530129 8.3:+57195978 None:intergenic
GAAGTTAAAGGTTCATGTAG+AGG 0.536609 8.3:-57196180 MS.gene88416:CDS
ACTTCACCGGTAACCTCTCT+AGG 0.537758 8.3:+57196439 None:intergenic
TACCTATGGGATCCTTCCAC+CGG 0.540635 8.3:-57196126 MS.gene88416:CDS
CTCTGTATACATAGCCACTT+GGG 0.546267 8.3:+57195415 None:intergenic
TGCTTTGGTCTTATCATCGA+AGG 0.551022 8.3:+57195882 None:intergenic
TGCGCTTACTTCCTCTACGA+TGG 0.554150 8.3:+57196517 None:intergenic
GTTAACAGATGATTACTTGG+TGG 0.554811 8.3:-57196025 MS.gene88416:CDS
TGTTCAAAATCATCTGGAAG+AGG 0.556562 8.3:+57195737 None:intergenic
ATCGATAGATAATGTGTGGA+AGG 0.566780 8.3:-57195938 MS.gene88416:CDS
AACCCCATAAACTCTTCCAA+TGG 0.567001 8.3:+57195444 None:intergenic
AAACGAAAGGAAACTGTTGG+AGG 0.567243 8.3:-57195765 MS.gene88416:intron
AATGGGTAAAAGTAACGAGT+TGG 0.569566 8.3:+57195560 None:intergenic
TGGAAGGATCCCATAGGTAG+AGG 0.576435 8.3:+57196130 None:intergenic
ACATTGAGTGAAGCAGAAGT+AGG 0.583867 8.3:+57196237 None:intergenic
TTATTCAAACCTCTACCTAT+GGG 0.586668 8.3:-57196139 MS.gene88416:CDS
TCCCATTGGAAGAGTTTATG+GGG 0.592813 8.3:-57195446 MS.gene88416:CDS
CCACTCTTTGTACAACACAA+TGG 0.595690 8.3:+57195542 None:intergenic
ATTAATTCATGAGACAGATA+GGG 0.597161 8.3:+57196471 None:intergenic
TTGGTGAAGTATGATGAGAA+TGG 0.601197 8.3:-57195488 MS.gene88416:CDS
GATATTATTGGAACAAATGG+TGG 0.604010 8.3:-57195518 MS.gene88416:CDS
CATCGAAGGTACTCGTATGA+GGG 0.606126 8.3:+57195896 None:intergenic
TTCGAACCATTAGGGGACAA+AGG 0.606571 8.3:+57196087 None:intergenic
ACTCTGTATACATAGCCACT+TGG 0.613352 8.3:+57195414 None:intergenic
GTCTAATTTCGAACCATTAG+GGG 0.616798 8.3:+57196080 None:intergenic
TAATAGTTCAAATCCTAGAG+AGG 0.618805 8.3:-57196452 MS.gene88416:CDS
TCTCATCGATAGATAATGTG+TGG 0.622988 8.3:-57195942 MS.gene88416:CDS
TAAGGTGGGATCATAGCCAT+AGG 0.623231 8.3:+57195993 None:intergenic
AAACGTATAAGAGACTTCAC+CGG 0.625176 8.3:+57196426 None:intergenic
GAATAATTATCATCTAAGGT+GGG 0.646495 8.3:+57195979 None:intergenic
CCATAAACTCTTCCAATGGG+AGG 0.649113 8.3:+57195448 None:intergenic
CCATTGTGTTGTACAAAGAG+TGG 0.651795 8.3:-57195542 MS.gene88416:CDS
AAGAGAAGCAACCATCGTAG+AGG 0.659616 8.3:-57196528 MS.gene88416:CDS
TCTACGAGTGTGTGTTGCGG+TGG 0.659999 8.3:+57196332 None:intergenic
ATGGGGTTATAGATCCCAAG+TGG 0.695201 8.3:-57195429 MS.gene88416:CDS
ATCCGGTGGAAGGATCCCAT+AGG 0.706031 8.3:+57196124 None:intergenic
TCGATGATAAGACCAAAGCA+GGG 0.728159 8.3:-57195879 MS.gene88416:intron
AATTCTACGAGTGTGTGTTG+CGG 0.731538 8.3:+57196329 None:intergenic
ATCCTCTTAAGCTTGCACCA+GGG 0.736483 8.3:+57195378 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAAAAGATTTGAAATAT+GGG - chr8.3:57196259-57196278 MS.gene88416:CDS 10.0%
!!! TTAATAAAAGATTTGAAATA+TGG - chr8.3:57196258-57196277 MS.gene88416:CDS 10.0%
! ACACGAATAATTATCATCTA+AGG + chr8.3:57195935-57195954 None:intergenic 25.0%
! AGATGATAATTATTCGTGTT+TGG - chr8.3:57195936-57195955 MS.gene88416:CDS 25.0%
! ATTAATTCATGAGACAGATA+GGG + chr8.3:57195439-57195458 None:intergenic 25.0%
! TATTAATTCATGAGACAGAT+AGG + chr8.3:57195440-57195459 None:intergenic 25.0%
! TTATCATGTTCAAAATCATC+TGG + chr8.3:57196179-57196198 None:intergenic 25.0%
!! GAATAATTATCATCTAAGGT+GGG + chr8.3:57195931-57195950 None:intergenic 25.0%
!! GATGATTTTGAACATGATAA+TGG - chr8.3:57196179-57196198 MS.gene88416:CDS 25.0%
!! TTGCATTTGATTTAAACGAA+AGG - chr8.3:57196129-57196148 MS.gene88416:CDS 25.0%
!!! CGTTCTTATTTTGAAGTTAA+AGG - chr8.3:57195715-57195734 MS.gene88416:CDS 25.0%
AATACAAAGTGAACTCTTCT+TGG - chr8.3:57196291-57196310 MS.gene88416:CDS 30.0%
ACAAAGAGTGGTGATATTAT+TGG - chr8.3:57196377-57196396 MS.gene88416:CDS 30.0%
ATAGGTAGAGGTTTGAATAA+TGG + chr8.3:57195768-57195787 None:intergenic 30.0%
ATTATTCAAACCTCTACCTA+TGG - chr8.3:57195767-57195786 MS.gene88416:intron 30.0%
CGAATAATTATCATCTAAGG+TGG + chr8.3:57195932-57195951 None:intergenic 30.0%
GATATTATTGGAACAAATGG+TGG - chr8.3:57196389-57196408 MS.gene88416:CDS 30.0%
GGTGATATTATTGGAACAAA+TGG - chr8.3:57196386-57196405 MS.gene88416:CDS 30.0%
TAATAGTTCAAATCCTAGAG+AGG - chr8.3:57195455-57195474 MS.gene88416:CDS 30.0%
TTATTCAAACCTCTACCTAT+GGG - chr8.3:57195768-57195787 MS.gene88416:intron 30.0%
TTTAAACGAAAGGAAACTGT+TGG - chr8.3:57196139-57196158 MS.gene88416:CDS 30.0%
! AACAAATGGTGGTATTGAAT+TGG - chr8.3:57196400-57196419 MS.gene88416:CDS 30.0%
! TTAGACGCTGAATATTTCTA+TGG - chr8.3:57195844-57195863 MS.gene88416:intron 30.0%
!! ATTTTTCAGTCTATGGTCTA+CGG - chr8.3:57196229-57196248 MS.gene88416:CDS 30.0%
!! TTGGTGAATTTTTCAGTCTA+TGG - chr8.3:57196222-57196241 MS.gene88416:CDS 30.0%
!!! AGGTACTTTTTTGTGAAATC+CGG + chr8.3:57195803-57195822 None:intergenic 30.0%
AAACGTATAAGAGACTTCAC+CGG + chr8.3:57195484-57195503 None:intergenic 35.0%
AAATGTGAGTTTGCGAAGTA+AGG + chr8.3:57195547-57195566 None:intergenic 35.0%
AATGGGGCTATTCATTTCAT+TGG - chr8.3:57196060-57196079 MS.gene88416:CDS 35.0%
AATGGGTAAAAGTAACGAGT+TGG + chr8.3:57196350-57196369 None:intergenic 35.0%
ACAATAACATTATCACGCCA+TGG + chr8.3:57196110-57196129 None:intergenic 35.0%
ATAATGGTGATTGTGGTTTG+TGG - chr8.3:57196195-57196214 MS.gene88416:CDS 35.0%
ATCGATAGATAATGTGTGGA+AGG - chr8.3:57195969-57195988 MS.gene88416:CDS 35.0%
CACTCTTTGTACAACACAAT+GGG + chr8.3:57196367-57196386 None:intergenic 35.0%
CCAAGTAATCATCTGTTAAC+TGG + chr8.3:57195882-57195901 None:intergenic 35.0%
CCAGTTAACAGATGATTACT+TGG - chr8.3:57195879-57195898 MS.gene88416:intron 35.0%
CGTCTAATTTCGAACCATTA+GGG + chr8.3:57195831-57195850 None:intergenic 35.0%
GAAGTTAAAGGTTCATGTAG+AGG - chr8.3:57195727-57195746 MS.gene88416:CDS 35.0%
GTCTAATTTCGAACCATTAG+GGG + chr8.3:57195830-57195849 None:intergenic 35.0%
GTTAACAGATGATTACTTGG+TGG - chr8.3:57195882-57195901 MS.gene88416:CDS 35.0%
TCAAATGCGTTTGTAAGTCT+TGG - chr8.3:57195503-57195522 MS.gene88416:CDS 35.0%
TCTCATCGATAGATAATGTG+TGG - chr8.3:57195965-57195984 MS.gene88416:CDS 35.0%
TGGTGAAGTATGATGAGAAT+GGG - chr8.3:57196420-57196439 MS.gene88416:CDS 35.0%
TGTTCAAAATCATCTGGAAG+AGG + chr8.3:57196173-57196192 None:intergenic 35.0%
TTCATCGTGATATTGTTCCA+TGG - chr8.3:57196090-57196109 MS.gene88416:CDS 35.0%
TTGGTGAAGTATGATGAGAA+TGG - chr8.3:57196419-57196438 MS.gene88416:CDS 35.0%
! CGAGTTGGAATATGATCAAT+AGG + chr8.3:57196335-57196354 None:intergenic 35.0%
! TAATGGTGATTGTGGTTTGT+GGG - chr8.3:57196196-57196215 MS.gene88416:CDS 35.0%
!! GAACATGATAATGGTGATTG+TGG - chr8.3:57196188-57196207 MS.gene88416:CDS 35.0%
!!! TACTTTTTTGTGAAATCCGG+TGG + chr8.3:57195800-57195819 None:intergenic 35.0%
!!! TTGGTGGTTTTAATGTCCTA+TGG - chr8.3:57195898-57195917 MS.gene88416:CDS 35.0%
AAACGAAAGGAAACTGTTGG+AGG - chr8.3:57196142-57196161 MS.gene88416:CDS 40.0%
AACCCCATAAACTCTTCCAA+TGG + chr8.3:57196466-57196485 None:intergenic 40.0%
AATTCTACGAGTGTGTGTTG+CGG + chr8.3:57195581-57195600 None:intergenic 40.0%
ACATTGAGTGAAGCAGAAGT+AGG + chr8.3:57195673-57195692 None:intergenic 40.0%
ACCCCATAAACTCTTCCAAT+GGG + chr8.3:57196465-57196484 None:intergenic 40.0%
ACTCTGTATACATAGCCACT+TGG + chr8.3:57196496-57196515 None:intergenic 40.0%
ATTATAGAGACACCCTGCTT+TGG + chr8.3:57196043-57196062 None:intergenic 40.0%
CCACTCTTTGTACAACACAA+TGG + chr8.3:57196368-57196387 None:intergenic 40.0%
CCATTGTGTTGTACAAAGAG+TGG - chr8.3:57196365-57196384 MS.gene88416:CDS 40.0%
CTCCCATTGGAAGAGTTTAT+GGG - chr8.3:57196460-57196479 MS.gene88416:CDS 40.0%
CTCTGTATACATAGCCACTT+GGG + chr8.3:57196495-57196514 None:intergenic 40.0%
GCGTCTAATTTCGAACCATT+AGG + chr8.3:57195832-57195851 None:intergenic 40.0%
GGGCTATTCATTTCATTGGT+TGG - chr8.3:57196064-57196083 MS.gene88416:CDS 40.0%
TAAGCGCACAGAGAAGAAAA+AGG - chr8.3:57195405-57195424 MS.gene88416:CDS 40.0%
TCAAATCCTAGAGAGGTTAC+CGG - chr8.3:57195462-57195481 MS.gene88416:CDS 40.0%
TCCCATTGGAAGAGTTTATG+GGG - chr8.3:57196461-57196480 MS.gene88416:CDS 40.0%
TCGATGATAAGACCAAAGCA+GGG - chr8.3:57196028-57196047 MS.gene88416:CDS 40.0%
TTCGATGATAAGACCAAAGC+AGG - chr8.3:57196027-57196046 MS.gene88416:CDS 40.0%
! AAAGCAGGGTGTCTCTATAA+TGG - chr8.3:57196042-57196061 MS.gene88416:CDS 40.0%
! AAAGTACCTTTGTCCCCTAA+TGG - chr8.3:57195814-57195833 MS.gene88416:intron 40.0%
! AAGCAGGGTGTCTCTATAAT+GGG - chr8.3:57196043-57196062 MS.gene88416:CDS 40.0%
! TTTTTGTGAAATCCGGTGGA+AGG + chr8.3:57195796-57195815 None:intergenic 40.0%
!! TGCTTTGGTCTTATCATCGA+AGG + chr8.3:57196028-57196047 None:intergenic 40.0%
AAGAGAAGCAACCATCGTAG+AGG - chr8.3:57195379-57195398 MS.gene88416:CDS 45.0%
ATCCTCTTAAGCTTGCACCA+GGG + chr8.3:57196532-57196551 None:intergenic 45.0%
ATGGGGTTATAGATCCCAAG+TGG - chr8.3:57196478-57196497 MS.gene88416:CDS 45.0%
CCATAAACTCTTCCAATGGG+AGG + chr8.3:57196462-57196481 None:intergenic 45.0%
CCTCCCATTGGAAGAGTTTA+TGG - chr8.3:57196459-57196478 MS.gene88416:CDS 45.0%
TAAGGTGGGATCATAGCCAT+AGG + chr8.3:57195917-57195936 None:intergenic 45.0%
TTAGCAGCATCGCTTGATGA+TGG - chr8.3:57195646-57195665 MS.gene88416:CDS 45.0%
TTCGAACCATTAGGGGACAA+AGG + chr8.3:57195823-57195842 None:intergenic 45.0%
! AGCAGGGTGTCTCTATAATG+GGG - chr8.3:57196044-57196063 MS.gene88416:CDS 45.0%
! GATTGTGGTTTGTGGGTCTT+TGG - chr8.3:57196203-57196222 MS.gene88416:CDS 45.0%
! TGTTAGAGCATTCCTCCCAT+TGG - chr8.3:57196447-57196466 MS.gene88416:CDS 45.0%
!! CATCGAAGGTACTCGTATGA+GGG + chr8.3:57196014-57196033 None:intergenic 45.0%
!! TCATCGAAGGTACTCGTATG+AGG + chr8.3:57196015-57196034 None:intergenic 45.0%
ACTTCACCGGTAACCTCTCT+AGG + chr8.3:57195471-57195490 None:intergenic 50.0%
CATCCTCTTAAGCTTGCACC+AGG + chr8.3:57196533-57196552 None:intergenic 50.0%
TACCTATGGGATCCTTCCAC+CGG - chr8.3:57195781-57195800 MS.gene88416:intron 50.0%
TGCGCTTACTTCCTCTACGA+TGG + chr8.3:57195393-57195412 None:intergenic 50.0%
TGGAAGGATCCCATAGGTAG+AGG + chr8.3:57195780-57195799 None:intergenic 50.0%
ATCCGGTGGAAGGATCCCAT+AGG + chr8.3:57195786-57195805 None:intergenic 55.0%
CTCCCTGGTGCAAGCTTAAG+AGG - chr8.3:57196527-57196546 MS.gene88416:CDS 55.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr8.3:57196512-57196531 MS.gene88416:CDS 55.0%
TCTACGAGTGTGTGTTGCGG+TGG + chr8.3:57195578-57195597 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 57195376 57196553 57195376 ID=MS.gene88416
chr8.3 mRNA 57195376 57196553 57195376 ID=MS.gene88416.t1;Parent=MS.gene88416
chr8.3 exon 57195880 57196553 57195880 ID=MS.gene88416.t1.exon1;Parent=MS.gene88416.t1
chr8.3 CDS 57195880 57196553 57195880 ID=cds.MS.gene88416.t1;Parent=MS.gene88416.t1
chr8.3 exon 57195376 57195778 57195376 ID=MS.gene88416.t1.exon2;Parent=MS.gene88416.t1
chr8.3 CDS 57195376 57195778 57195376 ID=cds.MS.gene88416.t1;Parent=MS.gene88416.t1
Gene Sequence

>MS.gene88416

ATGAAGAGAAGCAACCATCGTAGAGGAAGTAAGCGCACAGAGAAGAAAAAGGACACGCTACCCTATCTGTCTCATGAATTAATAGTTCAAATCCTAGAGAGGTTACCGGTGAAGTCTCTTATACGTTTCAAATGCGTTTGTAAGTCTTGGTTTTCTCTTATCTCTGATCCTTACTTCGCAAACTCACATTTTCAAATTACCACCGCAACACACACTCGTAGAATTTTGTGCATAAGATCATTTTCAGATCGTCGAACTCGATCTATAGATTTAGCAGCATCGCTTGATGATGGTCCTACTTCTGCTTCACTCAATGTTGATTTTTTACGTACAGAATATCGTTCTTATTTTGAAGTTAAAGGTTCATGTAGAGGCTTTGTACTTTTGCACCATTATTCAAACCTCTACCTATGGGATCCTTCCACCGGATTTCACAAAAAAGTACCTTTGTCCCCTAATGGTTCGAAATTAGACGCTGAATATTTCTATGGTTTCGAGTATGACCAGTTAACAGATGATTACTTGGTGGTTTTAATGTCCTATGGCTATGATCCCACCTTAGATGATAATTATTCGTGTTTGGCGTTTTTCTCATCGATAGATAATGTGTGGAAGGAAATTGAGTGCTCTCATAACCCTCATACGAGTACCTTCGATGATAAGACCAAAGCAGGGTGTCTCTATAATGGGGCTATTCATTTCATTGGTTGGCTTTTCATCGTGATATTGTTCCATGGCGTGATAATGTTATTGTTGCATTTGATTTAAACGAAAGGAAACTGTTGGAGGAGATGCCTCTTCCAGATGATTTTGAACATGATAATGGTGATTGTGGTTTGTGGGTCTTTGGTGAATTTTTCAGTCTATGGTCTACGGATTACGTTAATAAAAGATTTGAAATATGGGTGATGAAAGAATACAAAGTGAACTCTTCTTGGACAAAGACTCTTGTTTTTCCTATTGATCATATTCCAACTCGTTACTTTTACCCATTGTGTTGTACAAAGAGTGGTGATATTATTGGAACAAATGGTGGTATTGAATTGGTGAAGTATGATGAGAATGGGCAGTTGTTAGAGCATTCCTCCCATTGGAAGAGTTTATGGGGTTATAGATCCCAAGTGGCTATGTATACAGAGTCTCTGCTTTCACTCCCTGGTGCAAGCTTAAGAGGATGA

Protein sequence

>MS.gene88416.t1

MKRSNHRRGSKRTEKKKDTLPYLSHELIVQILERLPVKSLIRFKCVCKSWFSLISDPYFANSHFQITTATHTRRILCIRSFSDRRTRSIDLAASLDDGPTSASLNVDFLRTEYRSYFEVKGSCRGFVLLHHYSNLYLWDPSTGFHKKVPLSPNGSKLDAEYFYGFEYDQLTDDYLVVLMSYGYDPTLDDNYSCLAFFSSIDNVWKEIECSHNPHTSTFDDKTKAGKLLEEMPLPDDFEHDNGDCGLWVFGEFFSLWSTDYVNKRFEIWVMKEYKVNSSWTKTLVFPIDHIPTRYFYPLCCTKSGDIIGTNGGIELVKYDENGQLLEHSSHWKSLWGYRSQVAMYTESLLSLPGASLRG