AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59639


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59639.t1 MTR_4g116330 54.948 384 153 8 4 379 9 380 4.22e-130 378
MS.gene59639.t1 MTR_4g114700 71.600 250 31 1 121 370 9 218 2.32e-122 353
MS.gene59639.t1 MTR_3g034180 51.938 387 163 8 6 378 111 488 1.83e-119 355
MS.gene59639.t1 MTR_3g103020 52.850 386 157 11 5 379 7 378 4.16e-118 348
MS.gene59639.t1 MTR_4g109280 54.011 374 150 8 12 379 2 359 7.39e-115 338
MS.gene59639.t1 MTR_3g034160 51.436 383 163 7 10 378 1 374 1.35e-113 336
MS.gene59639.t1 MTR_3g034130 51.482 371 156 8 10 365 1 362 1.52e-111 330
MS.gene59639.t1 MTR_4g117850 51.743 373 149 13 17 376 22 376 3.02e-109 325
MS.gene59639.t1 MTR_4g116330 50.529 378 140 8 4 379 9 341 4.01e-108 321
MS.gene59639.t1 MTR_4g109270 50.919 381 156 11 12 379 2 364 4.73e-108 322
MS.gene59639.t1 MTR_4g117720 48.571 385 143 9 5 379 39 378 5.25e-105 314
MS.gene59639.t1 MTR_4g023090 47.194 392 168 10 11 378 9 385 1.03e-103 311
MS.gene59639.t1 MTR_6g060650 52.618 382 155 9 12 378 2 372 1.23e-103 310
MS.gene59639.t1 MTR_4g023080 49.202 376 157 10 10 376 1 351 3.01e-102 306
MS.gene59639.t1 MTR_4g021785 48.677 378 163 9 10 379 1 355 5.48e-102 306
MS.gene59639.t1 MTR_4g094365 49.211 380 164 11 12 379 2 364 3.29e-99 299
MS.gene59639.t1 MTR_4g117770 48.312 385 163 12 12 379 2 367 1.01e-98 298
MS.gene59639.t1 MTR_4g117810 48.312 385 163 12 12 379 2 367 1.01e-98 298
MS.gene59639.t1 MTR_8g433040 46.419 377 175 11 8 379 10 364 5.91e-96 291
MS.gene59639.t1 MTR_8g032380 46.419 377 175 11 8 379 10 364 5.91e-96 291
MS.gene59639.t1 MTR_4g023070 48.042 383 157 13 18 376 3 367 1.67e-95 290
MS.gene59639.t1 MTR_4g118380 50.000 364 148 9 12 349 2 357 9.04e-95 287
MS.gene59639.t1 MTR_4g117780 47.453 373 169 10 18 379 11 367 1.26e-94 287
MS.gene59639.t1 MTR_1g055135 46.891 386 176 14 9 379 4 375 8.98e-94 285
MS.gene59639.t1 MTR_4g023120 47.382 382 161 12 18 376 3 367 4.16e-93 283
MS.gene59639.t1 MTR_4g023440 46.361 371 152 8 9 379 9 332 5.63e-93 282
MS.gene59639.t1 MTR_4g023130 45.745 376 129 9 10 376 1 310 1.75e-92 280
MS.gene59639.t1 MTR_4g023380 46.135 401 154 9 11 379 9 379 2.37e-92 282
MS.gene59639.t1 MTR_4g122850 48.619 362 164 13 30 379 13 364 3.38e-92 281
MS.gene59639.t1 MTR_4g023150 46.982 381 161 13 11 376 3 357 4.74e-92 280
MS.gene59639.t1 MTR_5g070130 48.964 386 166 17 12 379 5 377 6.52e-92 281
MS.gene59639.t1 MTR_5g097210 46.702 379 173 12 10 377 1 361 2.42e-91 279
MS.gene59639.t1 MTR_4g023190 47.090 378 164 11 11 376 3 356 5.92e-91 278
MS.gene59639.t1 MTR_5g070080 47.355 397 166 13 11 379 5 386 9.99e-90 275
MS.gene59639.t1 MTR_4g023200 47.895 380 159 12 11 376 3 357 2.56e-88 271
MS.gene59639.t1 MTR_5g070088 45.802 393 172 11 13 376 2 382 5.22e-88 271
MS.gene59639.t1 MTR_8g032390 44.271 384 162 12 2 374 28 370 7.35e-85 262
MS.gene59639.t1 MTR_1g055165 43.081 383 137 9 11 379 3 318 7.88e-85 260
MS.gene59639.t1 MTR_4g117750 46.419 377 163 11 16 375 1 355 9.44e-82 258
MS.gene59639.t1 MTR_4g117750 49.630 135 55 4 252 376 349 480 1.50e-31 125
MS.gene59639.t1 MTR_4g121580 43.548 372 165 13 10 369 1 339 2.22e-76 241
MS.gene59639.t1 MTR_8g013010 50.181 277 122 6 12 282 48 314 6.63e-73 230
MS.gene59639.t1 MTR_4g117870 45.277 307 127 8 74 379 1 267 1.04e-71 225
MS.gene59639.t1 MTR_8g433030 41.146 384 141 14 2 374 28 337 1.40e-70 224
MS.gene59639.t1 MTR_1g055195 46.048 291 123 10 103 379 208 478 6.10e-66 217
MS.gene59639.t1 MTR_4g116320 55.251 219 84 7 168 377 43 256 1.64e-65 209
MS.gene59639.t1 MTR_7g079370 41.860 344 174 12 47 373 16 350 4.70e-65 211
MS.gene59639.t1 MTR_4g118370 46.559 247 107 8 133 376 33 257 1.16e-60 196
MS.gene59639.t1 MTR_8g040935 50.739 203 84 5 189 379 10 208 1.22e-58 189
MS.gene59639.t1 MTR_4g116340 46.642 268 95 8 5 252 7 246 3.28e-58 190
MS.gene59639.t1 MTR_4g118400 43.071 267 111 7 113 373 63 294 8.66e-58 190
MS.gene59639.t1 MTR_8g102520 39.181 342 152 11 52 379 23 322 1.89e-55 185
MS.gene59639.t1 MTR_7g079400 40.000 320 165 11 74 379 31 337 3.63e-53 179
MS.gene59639.t1 MTR_1g055175 48.020 202 91 7 188 379 4 201 3.53e-50 167
MS.gene59639.t1 MTR_2g048580 33.333 390 189 16 12 379 2 342 8.01e-47 163
MS.gene59639.t1 MTR_1g055250 41.743 218 113 7 139 347 27 239 1.11e-42 152
MS.gene59639.t1 MTR_6g463430 44.500 200 93 6 186 376 9 199 2.06e-40 142
MS.gene59639.t1 MTR_4g117530 41.096 219 90 5 162 379 73 253 2.83e-40 143
MS.gene59639.t1 MTR_7g079420 37.906 277 118 10 120 379 905 1144 4.02e-35 137
MS.gene59639.t1 MTR_4g118360 52.713 129 56 3 253 379 1 126 4.39e-35 125
MS.gene59639.t1 MTR_1g097490 29.155 367 222 14 18 371 49 390 6.36e-30 119
MS.gene59639.t1 MTR_4g055060 30.422 332 183 14 11 316 23 332 1.38e-29 118
MS.gene59639.t1 MTR_1g094210 28.056 360 213 14 10 350 49 381 1.70e-29 118
MS.gene59639.t1 MTR_1g094210 27.559 381 226 15 10 371 49 398 2.51e-29 117
MS.gene59639.t1 MTR_5g023000 59.794 97 34 2 284 379 7 99 2.96e-29 109
MS.gene59639.t1 MTR_4g122860 41.270 189 79 8 198 379 157 320 8.29e-29 115
MS.gene59639.t1 MTR_7g117720 40.566 212 88 10 10 212 1 183 1.29e-28 113
MS.gene59639.t1 MTR_7g117720 56.322 87 37 1 289 374 186 272 3.40e-19 87.0
MS.gene59639.t1 MTR_4g109290 41.520 171 59 3 10 177 1 133 6.26e-28 108
MS.gene59639.t1 MTR_4g109290 60.714 56 19 1 324 379 136 188 1.00e-11 63.9
MS.gene59639.t1 MTR_5g069120 40.556 180 94 6 30 201 3 177 9.04e-28 108
MS.gene59639.t1 MTR_4g107820 28.226 372 237 12 13 371 31 385 9.35e-28 113
MS.gene59639.t1 MTR_4g107780 28.226 372 237 12 13 371 31 385 9.35e-28 113
MS.gene59639.t1 MTR_8g098830 43.030 165 77 6 193 345 35 194 1.22e-27 109
MS.gene59639.t1 MTR_4g107780 28.495 372 236 12 13 371 31 385 1.24e-27 113
MS.gene59639.t1 MTR_4g107820 28.495 372 236 12 13 371 31 385 1.42e-27 112
MS.gene59639.t1 MTR_3g014540 30.548 347 203 13 18 348 29 353 3.35e-26 108
MS.gene59639.t1 MTR_3g010870 29.492 295 179 9 18 302 37 312 7.67e-26 107
MS.gene59639.t1 MTR_3g023930 30.508 295 162 11 18 302 34 295 8.16e-26 107
MS.gene59639.t1 MTR_4g117430 43.506 154 68 6 133 280 15 155 1.51e-25 101
MS.gene59639.t1 MTR_3g010970 30.272 294 166 11 21 302 51 317 1.57e-25 106
MS.gene59639.t1 MTR_4g037465 27.226 393 218 17 1 346 1 372 2.45e-25 106
MS.gene59639.t1 MTR_1g097560 28.947 342 179 19 18 334 36 338 2.56e-25 105
MS.gene59639.t1 MTR_5g011200 26.936 297 196 9 18 303 17 303 2.73e-25 105
MS.gene59639.t1 MTR_3g014570 31.546 317 174 12 18 313 29 323 3.46e-25 105
MS.gene59639.t1 MTR_7g079450 45.000 140 71 3 240 379 4 137 5.59e-25 99.4
MS.gene59639.t1 MTR_2g021150 27.273 352 198 17 10 327 1 328 7.55e-25 104
MS.gene59639.t1 MTR_8g467140 29.642 307 180 11 16 305 30 317 1.40e-24 103
MS.gene59639.t1 MTR_6g021880 29.201 363 223 14 30 371 32 381 1.93e-24 103
MS.gene59639.t1 MTR_3g036290 30.592 304 165 15 18 306 22 294 2.34e-24 103
MS.gene59639.t1 MTR_4g108820 28.371 356 175 14 1 325 7 313 3.15e-24 102
MS.gene59639.t1 MTR_2g046920 29.299 314 178 13 17 310 23 312 3.22e-24 102
MS.gene59639.t1 MTR_3g030250 29.934 304 167 12 18 305 37 310 1.23e-23 101
MS.gene59639.t1 MTR_2g426020 27.195 353 213 11 18 341 6 343 1.49e-23 101
MS.gene59639.t1 MTR_8g101580 26.753 385 228 16 12 371 39 394 2.87e-23 100
MS.gene59639.t1 MTR_6g053260 26.230 305 185 7 18 302 337 621 4.13e-23 101
MS.gene59639.t1 MTR_3g010520 29.010 293 170 12 18 302 25 287 5.91e-23 99.0
MS.gene59639.t1 MTR_4g030830 25.126 398 229 12 10 356 1 380 6.04e-23 99.8
MS.gene59639.t1 MTR_2g055970 27.052 329 197 11 7 317 200 503 8.43e-23 100
MS.gene59639.t1 MTR_7g070880 26.913 379 184 13 18 327 21 375 1.09e-22 99.0
MS.gene59639.t1 MTR_6g065980 30.033 303 159 13 18 302 16 283 1.18e-22 98.2
MS.gene59639.t1 MTR_3g007410 29.721 323 184 12 21 323 55 354 1.47e-22 98.6
MS.gene59639.t1 MTR_2g021155 30.725 345 197 15 18 341 36 359 1.65e-22 100
MS.gene59639.t1 MTR_1g097330 28.228 333 193 13 18 329 16 323 2.08e-22 98.2
MS.gene59639.t1 MTR_7g070440 29.970 337 173 19 10 310 1 310 2.58e-22 97.4
MS.gene59639.t1 MTR_3g083640 29.316 307 165 13 18 302 55 331 2.62e-22 97.8
MS.gene59639.t1 MTR_5g022420 29.195 298 175 13 17 303 26 298 3.22e-22 97.4
MS.gene59639.t1 MTR_3g010620 30.375 293 164 13 21 302 39 302 3.31e-22 97.4
MS.gene59639.t1 MTR_3g007360 29.846 325 181 14 21 323 55 354 3.46e-22 97.4
MS.gene59639.t1 MTR_2g021800 26.034 411 236 14 17 372 15 412 4.11e-22 97.4
MS.gene59639.t1 MTR_4g061340 28.344 314 177 10 18 306 26 316 4.30e-22 97.1
MS.gene59639.t1 MTR_3g010920 29.452 292 171 11 18 302 44 307 6.41e-22 96.3
MS.gene59639.t1 MTR_6g053240 26.045 311 183 8 18 302 28 317 6.46e-22 96.7
MS.gene59639.t1 MTR_3g007330 27.687 307 178 10 18 306 48 328 6.55e-22 96.7
MS.gene59639.t1 MTR_3g006670 28.662 314 192 11 18 315 49 346 8.97e-22 96.3
MS.gene59639.t1 MTR_3g011100 30.159 315 171 15 18 306 235 526 9.81e-22 97.4
MS.gene59639.t1 MTR_2g021190 28.075 374 227 15 18 371 21 372 1.04e-21 95.9
MS.gene59639.t1 MTR_3g030330 28.094 299 178 11 18 303 20 294 1.29e-21 95.5
MS.gene59639.t1 MTR_5g057710 29.373 303 181 11 18 305 46 330 1.48e-21 95.5
MS.gene59639.t1 MTR_3g010590 28.620 297 172 12 18 302 39 307 1.70e-21 95.1
MS.gene59639.t1 MTR_1g050542 26.649 379 231 18 13 371 53 404 2.10e-21 95.1
MS.gene59639.t1 MTR_1g054725 26.718 393 230 15 9 371 11 375 2.44e-21 94.7
MS.gene59639.t1 MTR_1g068835 29.316 307 181 12 18 306 4 292 3.23e-21 94.4
MS.gene59639.t1 MTR_6g007135 28.383 303 194 9 18 305 26 320 3.36e-21 94.4
MS.gene59639.t1 MTR_3g009310 28.852 305 182 14 18 306 42 327 4.60e-21 94.0
MS.gene59639.t1 MTR_2g046830 28.571 308 188 12 17 310 24 313 5.68e-21 94.0
MS.gene59639.t1 MTR_5g057790 29.430 316 182 12 18 315 46 338 6.35e-21 93.6
MS.gene59639.t1 MTR_7g070830 26.718 393 192 15 8 327 6 375 6.40e-21 94.0
MS.gene59639.t1 MTR_2g022000 27.568 370 194 14 17 326 15 370 9.08e-21 93.6
MS.gene59639.t1 MTR_3g007430 27.907 301 183 8 21 305 46 328 9.18e-21 93.2
MS.gene59639.t1 MTR_0464s0020 31.672 341 170 19 16 308 21 346 1.30e-20 93.2
MS.gene59639.t1 MTR_4g023430 58.025 81 33 1 11 91 34 113 1.31e-20 89.7
MS.gene59639.t1 MTR_4g023430 47.561 82 43 0 298 379 141 222 8.15e-18 82.0
MS.gene59639.t1 MTR_7g050520 29.052 327 177 10 15 310 19 321 1.88e-20 92.4
MS.gene59639.t1 MTR_7g060940 26.488 336 187 11 12 310 16 328 3.50e-20 91.7
MS.gene59639.t1 MTR_3g464500 27.374 358 191 16 14 325 23 357 3.73e-20 91.7
MS.gene59639.t1 MTR_6g017280 26.316 361 206 14 10 327 1 344 3.88e-20 91.3
MS.gene59639.t1 MTR_7g056503 27.215 316 196 12 17 306 20 327 4.59e-20 91.3
MS.gene59639.t1 MTR_7g056820 25.132 378 212 16 18 350 7 358 5.61e-20 90.9
MS.gene59639.t1 MTR_6g034830 40.458 131 61 2 3 133 5 118 9.36e-20 84.3
MS.gene59639.t1 MTR_3g036335 25.600 375 237 11 18 371 41 394 1.09e-19 90.1
MS.gene59639.t1 MTR_3g013770 28.931 318 185 13 18 313 33 331 1.20e-19 90.1
MS.gene59639.t1 MTR_3g006500 28.213 319 181 15 9 305 8 300 1.22e-19 89.7
MS.gene59639.t1 MTR_6g027910 28.173 394 215 18 18 371 9 374 2.07e-19 89.0
MS.gene59639.t1 MTR_2g078900 27.389 314 183 12 10 302 21 310 2.14e-19 89.0
MS.gene59639.t1 MTR_3g464470 26.197 355 196 16 14 325 3 334 2.19e-19 89.0
MS.gene59639.t1 MTR_3g009240 31.000 300 170 14 18 302 36 313 2.56e-19 89.0
MS.gene59639.t1 MTR_7g066000 26.133 375 217 18 15 346 22 379 2.62e-19 89.0
MS.gene59639.t1 MTR_7g050480 29.063 320 186 10 15 310 19 321 2.93e-19 89.0
MS.gene59639.t1 MTR_0760s0010 30.034 293 159 13 26 301 55 318 2.98e-19 89.0
MS.gene59639.t1 MTR_7g056290 30.678 339 167 16 15 306 19 336 4.14e-19 88.6
MS.gene59639.t1 MTR_4g129190 33.193 238 127 11 18 242 6 224 4.19e-19 88.6
MS.gene59639.t1 MTR_7g056760 26.902 368 224 15 16 345 21 381 4.90e-19 88.2
MS.gene59639.t1 MTR_7g055870 25.622 402 216 17 12 341 7 397 5.21e-19 88.6
MS.gene59639.t1 MTR_7g056390 30.409 342 166 16 15 307 15 333 5.61e-19 88.2
MS.gene59639.t1 MTR_7g407070 29.063 320 183 14 18 306 32 338 6.65e-19 87.8
MS.gene59639.t1 MTR_7g055930 26.601 406 207 19 12 341 7 397 7.23e-19 87.8
MS.gene59639.t1 MTR_2g046900 27.445 317 188 13 17 310 27 324 7.44e-19 87.8
MS.gene59639.t1 MTR_7g028660 26.479 355 201 11 16 332 9 341 7.45e-19 87.4
MS.gene59639.t1 MTR_4g013180 25.510 392 224 18 14 353 7 382 8.10e-19 88.2
MS.gene59639.t1 MTR_3g030240 28.859 298 167 14 18 302 40 305 8.69e-19 87.4
MS.gene59639.t1 MTR_3g036430 27.241 290 167 11 18 302 20 270 1.22e-18 86.7
MS.gene59639.t1 MTR_7g055987 27.405 343 181 16 21 325 23 335 1.29e-18 86.7
MS.gene59639.t1 MTR_2g029990 28.859 298 184 11 19 302 52 335 1.29e-18 87.0
MS.gene59639.t1 MTR_7g066030 25.765 392 215 16 7 343 8 378 1.47e-18 87.0
MS.gene59639.t1 MTR_7g060960 29.245 318 158 14 16 310 30 303 1.65e-18 86.3
MS.gene59639.t1 MTR_3g436150 29.393 313 185 13 18 306 32 332 1.71e-18 86.7
MS.gene59639.t1 MTR_4g133170 25.816 337 196 13 18 327 4 313 1.89e-18 86.7
MS.gene59639.t1 MTR_1g056710 28.037 321 182 15 8 305 24 318 3.14e-18 85.9
MS.gene59639.t1 MTR_7g056003 27.047 403 199 17 15 349 12 387 3.15e-18 85.9
MS.gene59639.t1 MTR_3g072470 30.145 345 160 16 15 306 16 332 3.22e-18 85.9
MS.gene59639.t1 MTR_8g062660 24.872 390 240 15 11 371 15 380 3.93e-18 86.7
MS.gene59639.t1 MTR_2g047832 27.469 324 191 13 17 310 28 337 4.59e-18 85.5
MS.gene59639.t1 MTR_0649s0020 26.209 393 196 16 18 350 11 369 4.83e-18 85.1
MS.gene59639.t1 MTR_0044s0300 28.105 306 172 11 18 302 38 316 4.85e-18 85.1
MS.gene59639.t1 MTR_5g057690 29.085 306 186 11 18 315 46 328 5.15e-18 85.1
MS.gene59639.t1 MTR_1g054575 28.135 327 182 16 13 319 47 340 5.71e-18 85.9
MS.gene59639.t1 MTR_7g013590 31.023 303 174 14 21 305 39 324 5.76e-18 85.1
MS.gene59639.t1 MTR_3g024110 29.333 300 171 16 18 302 101 374 5.81e-18 85.5
MS.gene59639.t1 MTR_3g058470 26.400 375 215 14 18 371 37 371 6.47e-18 84.7
MS.gene59639.t1 MTR_2g006360 29.703 303 161 11 16 314 44 298 6.74e-18 84.7
MS.gene59639.t1 MTR_2g031640 25.266 376 223 14 18 360 6 356 7.51e-18 84.7
MS.gene59639.t1 MTR_7g057270 26.970 330 202 11 18 315 26 348 8.74e-18 84.7
MS.gene59639.t1 MTR_6g034720 44.167 120 57 5 144 255 53 170 1.02e-17 81.6
MS.gene59639.t1 MTR_0097s0030 27.654 405 219 19 14 371 10 387 1.19e-17 84.0
MS.gene59639.t1 MTR_2g047240 27.654 405 219 19 14 371 10 387 1.19e-17 84.0
MS.gene59639.t1 MTR_4g033495 25.686 401 234 18 18 374 27 407 1.25e-17 84.3
MS.gene59639.t1 MTR_2g031680 23.989 371 231 11 18 360 6 353 1.61e-17 83.6
MS.gene59639.t1 MTR_5g057020 29.126 309 177 14 18 315 46 323 1.66e-17 83.2
MS.gene59639.t1 MTR_5g069760 26.531 343 198 12 16 325 4 325 1.83e-17 83.2
MS.gene59639.t1 MTR_5g069930 24.642 349 212 11 14 327 2 334 2.22e-17 83.2
MS.gene59639.t1 MTR_7g066100 26.225 408 232 17 15 373 8 395 3.70e-17 82.8
MS.gene59639.t1 MTR_7g052150 28.614 339 172 15 12 310 16 324 3.87e-17 82.8
MS.gene59639.t1 MTR_1g088120 25.152 330 197 11 16 306 8 326 4.82e-17 82.4
MS.gene59639.t1 MTR_5g009060 28.916 332 172 15 18 302 25 339 4.93e-17 82.4
MS.gene59639.t1 MTR_7g066850 24.060 399 225 17 3 347 8 382 5.11e-17 82.8
MS.gene59639.t1 MTR_3g013740 27.389 314 187 13 18 305 44 342 5.94e-17 82.0
MS.gene59639.t1 MTR_7g066010 25.521 384 200 14 7 346 8 349 8.30e-17 81.3
MS.gene59639.t1 MTR_0115s0020 25.157 318 197 12 18 301 10 320 9.17e-17 81.6
MS.gene59639.t1 MTR_3g006570 27.687 307 175 16 18 302 21 302 1.31e-16 80.9
MS.gene59639.t1 MTR_4g122840 39.568 139 43 5 244 379 164 264 1.33e-16 79.3
MS.gene59639.t1 MTR_3g024150 29.139 302 168 15 21 302 38 313 1.35e-16 80.9
MS.gene59639.t1 MTR_2g043410 26.344 372 197 14 21 336 25 375 1.47e-16 80.9
MS.gene59639.t1 MTR_7g050490 31.863 204 107 8 15 206 5 188 1.56e-16 77.4
MS.gene59639.t1 MTR_2g426070 26.196 397 239 13 19 378 7 386 1.95e-16 80.5
MS.gene59639.t1 MTR_3g437520 28.530 347 176 16 16 308 21 349 2.17e-16 80.9
MS.gene59639.t1 MTR_8g467670 25.067 371 214 15 17 345 13 361 2.49e-16 80.1
MS.gene59639.t1 MTR_8g073550 31.944 216 113 8 17 217 29 225 3.00e-16 77.8
MS.gene59639.t1 MTR_3g009260 29.195 298 169 15 21 302 44 315 3.16e-16 79.7
MS.gene59639.t1 MTR_2g043400 26.923 416 215 19 21 371 26 417 3.61e-16 79.7
MS.gene59639.t1 MTR_2g024110 23.969 388 245 16 18 376 4 370 3.86e-16 79.3
MS.gene59639.t1 MTR_5g046260 24.913 289 179 9 18 306 4 254 5.26e-16 78.2
MS.gene59639.t1 MTR_7g062060 25.749 334 193 13 17 306 11 333 5.97e-16 79.0
MS.gene59639.t1 MTR_2g437110 26.786 392 232 17 16 371 20 392 6.58e-16 79.3
MS.gene59639.t1 MTR_2g034700 26.012 346 201 15 11 326 7 327 6.66e-16 79.0
MS.gene59639.t1 MTR_7g069550 26.494 385 216 18 11 346 7 373 7.81e-16 78.6
MS.gene59639.t1 MTR_7g061060 27.019 359 198 17 16 331 11 348 8.83e-16 78.6
MS.gene59639.t1 MTR_3g024040 27.551 294 183 11 26 311 39 310 9.20e-16 78.2
MS.gene59639.t1 MTR_3g010430 26.490 302 187 12 18 302 36 319 9.50e-16 78.6
MS.gene59639.t1 MTR_5g008530 58.462 65 27 0 1 65 1 65 9.71e-16 72.0
MS.gene59639.t1 MTR_5g007610 27.389 314 186 11 18 306 41 337 1.06e-15 78.6
MS.gene59639.t1 MTR_1g055070 29.482 251 147 11 18 245 49 292 1.22e-15 78.2
MS.gene59639.t1 MTR_7g077070 23.514 370 219 16 14 327 12 373 1.22e-15 78.2
MS.gene59639.t1 MTR_1g068860 26.282 312 190 12 16 306 2 294 1.34e-15 77.8
MS.gene59639.t1 MTR_1g055375 25.163 306 192 13 21 305 7 296 1.43e-15 77.8
MS.gene59639.t1 MTR_6g048140 26.250 320 167 10 18 302 39 324 1.48e-15 77.8
MS.gene59639.t1 MTR_4g013185 23.750 400 221 15 16 346 8 392 1.54e-15 78.2
MS.gene59639.t1 MTR_7g078860 25.826 333 198 13 10 306 1 320 1.62e-15 77.8
MS.gene59639.t1 MTR_6g004660 27.778 378 236 13 18 371 16 380 1.71e-15 77.8
MS.gene59639.t1 MTR_4g024890 25.600 375 218 16 10 341 1 357 2.26e-15 77.4
MS.gene59639.t1 MTR_5g023570 39.831 118 62 4 17 134 36 144 2.46e-15 73.2
MS.gene59639.t1 MTR_1g068875 26.016 369 226 16 18 360 4 351 2.78e-15 77.0
MS.gene59639.t1 MTR_7g091630 25.360 347 199 16 10 314 24 352 2.94e-15 77.4
MS.gene59639.t1 MTR_3g030350 26.861 309 180 14 18 306 35 317 3.09e-15 77.0
MS.gene59639.t1 MTR_5g096710 27.219 338 184 11 15 314 20 333 3.69e-15 76.6
MS.gene59639.t1 MTR_1g115160 25.418 299 189 12 16 303 20 295 3.74e-15 76.6
MS.gene59639.t1 MTR_3g030310 25.407 307 187 11 18 302 21 307 4.01e-15 76.6
MS.gene59639.t1 MTR_6g013270 26.000 300 196 9 18 303 29 316 4.87e-15 76.3
MS.gene59639.t1 MTR_2g104340 24.221 417 238 15 11 376 7 396 4.92e-15 76.3
MS.gene59639.t1 MTR_3g006530 24.837 306 189 11 18 302 40 325 5.50e-15 76.3
MS.gene59639.t1 MTR_2g078850 26.174 298 184 12 21 302 33 310 5.59e-15 75.9
MS.gene59639.t1 MTR_6g017270 24.834 302 169 9 16 306 7 261 6.79e-15 75.5
MS.gene59639.t1 MTR_7g061050 28.049 328 185 13 16 312 11 318 6.87e-15 75.9
MS.gene59639.t1 MTR_2g031720 24.747 396 230 15 18 376 6 370 7.27e-15 75.9
MS.gene59639.t1 MTR_7g007300 26.282 312 174 16 16 305 101 378 8.69e-15 75.9
MS.gene59639.t1 MTR_7g077970 26.254 339 198 14 18 314 7 335 8.71e-15 75.9
MS.gene59639.t1 MTR_5g037680 28.291 357 204 15 17 336 7 348 9.69e-15 75.9
MS.gene59639.t1 MTR_3g007270 25.159 314 194 9 18 306 47 344 1.09e-14 75.5
MS.gene59639.t1 MTR_3g010870 28.829 222 135 8 18 235 37 239 1.14e-14 74.7
MS.gene59639.t1 MTR_0128s0020 25.664 339 200 13 1 306 1 320 1.48e-14 74.7
MS.gene59639.t1 MTR_0128s0010 25.758 330 196 12 3 301 8 319 1.49e-14 74.7
MS.gene59639.t1 MTR_8g063440 22.739 387 262 14 11 372 5 379 1.52e-14 74.7
MS.gene59639.t1 MTR_1g037540 26.203 374 211 20 26 346 13 374 1.59e-14 74.7
MS.gene59639.t1 MTR_0064s0160 24.848 330 213 11 4 301 28 354 1.72e-14 75.1
MS.gene59639.t1 MTR_1g114700 28.289 304 183 10 18 303 29 315 1.77e-14 74.7
MS.gene59639.t1 MTR_5g057040 32.804 189 107 8 18 195 46 225 2.09e-14 75.5
MS.gene59639.t1 MTR_8g063370 25.568 352 214 15 26 347 32 365 2.19e-14 74.3
MS.gene59639.t1 MTR_3g023940 25.490 306 185 8 18 302 34 317 2.32e-14 74.3
MS.gene59639.t1 MTR_4g030760 24.064 374 232 14 12 356 67 417 2.34e-14 74.3
MS.gene59639.t1 MTR_7g017170 27.515 338 172 16 18 305 18 332 2.35e-14 74.3
MS.gene59639.t1 MTR_7g017130 27.515 338 172 16 18 305 18 332 2.35e-14 74.3
MS.gene59639.t1 MTR_8g013005 54.839 62 25 1 318 379 1 59 2.53e-14 67.4
MS.gene59639.t1 MTR_2g047200 24.868 378 214 16 16 346 18 372 2.74e-14 73.9
MS.gene59639.t1 MTR_7g055977 26.053 380 215 13 16 350 5 363 2.84e-14 73.9
MS.gene59639.t1 MTR_5g057643 32.544 169 101 4 18 180 46 207 2.93e-14 72.8
MS.gene59639.t1 MTR_8g012090 26.316 342 200 14 21 339 19 331 3.05e-14 73.6
MS.gene59639.t1 MTR_7g091640 26.479 355 189 20 4 312 21 349 3.13e-14 73.9
MS.gene59639.t1 MTR_6g055210 26.549 339 190 13 4 300 8 329 3.17e-14 74.3
MS.gene59639.t1 MTR_7g061090 24.096 332 196 11 16 306 20 336 3.31e-14 73.9
MS.gene59639.t1 MTR_4g117550 24.755 408 219 17 12 376 11 373 3.89e-14 73.6
MS.gene59639.t1 MTR_3g083010 25.123 406 238 17 18 373 6 395 4.36e-14 73.6
MS.gene59639.t1 MTR_7g066840 26.184 359 188 20 16 325 21 351 5.38e-14 73.2
MS.gene59639.t1 MTR_2g426060 26.101 318 194 12 18 305 6 312 6.49e-14 73.2
MS.gene59639.t1 MTR_7g062100 24.096 332 206 8 4 306 10 324 6.99e-14 72.8
MS.gene59639.t1 MTR_3g096250 32.828 198 103 7 18 198 47 231 7.02e-14 72.4
MS.gene59639.t1 MTR_4g013175 23.929 397 226 13 16 347 8 393 7.19e-14 72.8
MS.gene59639.t1 MTR_7g035295 26.629 353 188 12 16 327 14 336 7.52e-14 72.8
MS.gene59639.t1 MTR_8g066440 23.925 372 231 14 19 349 24 384 7.68e-14 72.8
MS.gene59639.t1 MTR_5g056020 25.352 355 198 15 1 302 1 341 7.76e-14 73.2
MS.gene59639.t1 MTR_7g056797 24.752 404 258 15 4 371 9 402 8.52e-14 72.8
MS.gene59639.t1 MTR_7g022600 25.275 364 188 15 3 306 8 347 1.19e-13 72.4
MS.gene59639.t1 MTR_2g047892 24.458 323 192 11 14 302 18 322 1.39e-13 72.0
MS.gene59639.t1 MTR_0128s0070 23.360 381 230 13 16 353 20 381 1.48e-13 72.0
MS.gene59639.t1 MTR_8g464770 25.765 392 231 16 17 373 11 377 1.58e-13 71.6
MS.gene59639.t1 MTR_3g011060 27.103 321 177 14 18 305 28 324 2.41e-13 71.2
MS.gene59639.t1 MTR_2g021252 24.315 292 189 8 21 303 50 318 2.62e-13 71.2
MS.gene59639.t1 MTR_2g065860 25.298 336 191 16 10 303 4 321 3.00e-13 70.9
MS.gene59639.t1 MTR_2g010920 23.464 358 212 13 9 314 11 358 3.12e-13 70.9
MS.gene59639.t1 MTR_3g058440 27.755 245 146 9 18 245 35 265 3.46e-13 70.1
MS.gene59639.t1 MTR_5g068040 24.776 335 187 12 3 306 4 304 3.49e-13 70.5
MS.gene59639.t1 MTR_2g066200 24.176 364 211 16 11 331 5 346 4.52e-13 70.5
MS.gene59639.t1 MTR_6g086825 22.222 423 241 13 14 376 66 460 4.54e-13 70.5
MS.gene59639.t1 MTR_6g016285 24.121 398 218 16 14 346 17 395 4.89e-13 70.5
MS.gene59639.t1 MTR_8g046310 24.462 372 237 15 26 373 24 375 5.26e-13 70.1
MS.gene59639.t1 MTR_3g058480 26.766 269 144 8 18 257 39 283 6.45e-13 69.3
MS.gene59639.t1 MTR_6g461660 24.932 369 228 17 2 332 3 360 7.62e-13 69.7
MS.gene59639.t1 MTR_1g009110 26.748 329 190 14 4 302 3 310 8.49e-13 69.3
MS.gene59639.t1 MTR_2g028160 25.193 389 237 16 18 360 5 385 8.99e-13 69.7
MS.gene59639.t1 MTR_6g079810 23.677 359 209 11 1 306 53 399 8.99e-13 69.7
MS.gene59639.t1 MTR_8g039500 25.414 362 215 15 11 344 5 339 9.31e-13 68.9
MS.gene59639.t1 MTR_8g099460 25.938 320 188 13 15 305 2 301 9.46e-13 69.3
MS.gene59639.t1 MTR_5g024260 25.269 372 214 19 7 331 11 365 9.79e-13 69.3
MS.gene59639.t1 MTR_1g442850 26.050 357 193 16 17 327 4 335 1.00e-12 69.3
MS.gene59639.t1 MTR_5g048160 23.988 321 202 13 18 301 4 319 1.11e-12 69.3
MS.gene59639.t1 MTR_2g021950 25.852 352 197 14 21 326 19 352 1.54e-12 68.9
MS.gene59639.t1 MTR_7g078840 24.571 350 192 13 16 306 8 344 1.61e-12 68.9
MS.gene59639.t1 MTR_7g079160 26.354 277 144 9 16 243 6 271 1.96e-12 68.9
MS.gene59639.t1 MTR_2g021210 25.949 316 189 11 5 303 71 358 2.02e-12 68.6
MS.gene59639.t1 MTR_3g009250 30.909 220 124 10 21 234 44 241 2.10e-12 67.0
MS.gene59639.t1 MTR_2g461450 24.869 382 220 15 1 346 1 351 2.12e-12 68.2
MS.gene59639.t1 MTR_6g092560 24.112 394 190 16 12 333 6 362 2.27e-12 68.6
MS.gene59639.t1 MTR_4g030110 25.915 328 174 14 14 306 26 319 2.27e-12 68.2
MS.gene59639.t1 MTR_4g019990 25.000 340 184 13 14 306 2 317 2.40e-12 68.2
MS.gene59639.t1 MTR_8g063310 25.000 380 229 15 11 360 15 368 2.49e-12 68.2
MS.gene59639.t1 MTR_1g055145 47.872 94 37 4 30 119 45 130 2.55e-12 67.0
MS.gene59639.t1 MTR_7g052670 23.923 418 248 13 14 371 17 424 3.55e-12 67.8
MS.gene59639.t1 MTR_4g031770 24.038 312 187 11 18 305 4 289 4.42e-12 67.4
MS.gene59639.t1 MTR_7g055830 24.543 383 176 14 12 341 7 329 5.82e-12 66.6
MS.gene59639.t1 MTR_4g055820 23.599 339 212 12 10 306 6 339 6.06e-12 66.6
MS.gene59639.t1 MTR_2g024100 28.481 316 163 14 26 302 16 307 6.85e-12 67.0
MS.gene59639.t1 MTR_6g080680 24.773 331 201 11 12 306 13 331 7.10e-12 66.6
MS.gene59639.t1 MTR_6g004450 28.814 236 125 9 164 374 50 267 8.59e-12 65.5
MS.gene59639.t1 MTR_3g007300 27.852 298 163 14 18 306 49 303 1.06e-11 66.2
MS.gene59639.t1 MTR_0242s0060 24.405 336 198 13 10 303 1 322 1.37e-11 65.9
MS.gene59639.t1 MTR_0242s0040 24.405 336 198 13 10 303 1 322 1.37e-11 65.9
MS.gene59639.t1 MTR_7g016930 25.705 319 192 11 8 301 6 304 1.54e-11 65.5
MS.gene59639.t1 MTR_3g011650 30.769 221 124 11 21 234 82 280 1.67e-11 64.7
MS.gene59639.t1 MTR_7g067680 28.758 306 155 14 18 302 49 312 1.78e-11 65.5
MS.gene59639.t1 MTR_6g004210 25.063 395 225 17 31 371 38 415 1.80e-11 65.5
MS.gene59639.t1 MTR_1g029650 25.077 323 191 11 18 306 8 313 1.82e-11 65.5
MS.gene59639.t1 MTR_2g028110 25.064 391 235 14 18 378 4 366 2.24e-11 65.1
MS.gene59639.t1 MTR_7g017040 23.698 384 236 14 3 347 7 372 2.65e-11 65.1
MS.gene59639.t1 MTR_6g007150 26.389 288 178 13 108 371 60 337 5.26e-11 63.9
MS.gene59639.t1 MTR_7g055850 29.897 194 101 9 18 180 13 202 5.81e-11 63.2
MS.gene59639.t1 MTR_2g026010 24.051 395 238 16 18 378 4 370 7.25e-11 63.5
MS.gene59639.t1 MTR_1g071010 24.545 330 201 13 9 306 6 319 7.68e-11 63.5
MS.gene59639.t1 MTR_0128s0130 59.259 54 20 1 18 69 25 78 7.95e-11 58.2
MS.gene59639.t1 MTR_7g066080 25.588 340 174 16 14 302 12 323 7.98e-11 63.5
MS.gene59639.t1 MTR_2g078870 24.803 254 153 10 65 302 2 233 9.31e-11 62.8
MS.gene59639.t1 MTR_3g080370 22.469 405 227 17 32 371 35 417 9.40e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59639.t1 AT3G06240 25.891 421 244 16 3 371 15 419 4.07e-25 106
MS.gene59639.t1 AT3G23880 28.105 306 180 11 18 303 14 299 2.18e-19 89.0
MS.gene59639.t1 AT4G12560 27.215 316 188 13 18 306 4 304 4.06e-19 88.6
MS.gene59639.t1 AT4G12560 27.215 316 188 13 18 306 4 304 4.06e-19 88.6
MS.gene59639.t1 AT4G12560 27.215 316 188 13 18 306 4 304 4.06e-19 88.6
MS.gene59639.t1 AT1G33530 28.527 319 174 14 4 301 81 366 5.63e-17 82.4
MS.gene59639.t1 AT4G22390 25.000 332 214 11 19 327 5 324 1.03e-14 75.5
MS.gene59639.t1 AT4G22390 25.000 332 214 11 19 327 5 324 1.17e-14 75.5
MS.gene59639.t1 AT3G16210 25.418 299 184 12 17 307 4 271 2.62e-13 70.9
MS.gene59639.t1 AT4G19940 25.714 350 208 15 18 333 35 366 4.22e-12 67.4
MS.gene59639.t1 AT3G17480 22.397 317 196 12 18 307 12 305 5.93e-11 63.9

Find 71 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATATAACAACCAGATTT+TGG 0.126101 8.1:+11708890 None:intergenic
AATACGTATTTATATGGATT+TGG 0.210065 8.1:-11708737 MS.gene59639:CDS
AATCGTAATACGTATTTATA+TGG 0.218320 8.1:-11708743 MS.gene59639:CDS
TGATCATCTTAATCCTATTA+TGG 0.224131 8.1:-11709147 MS.gene59639:CDS
AGAGTAGGGTTGGTCTTTAA+TGG 0.230123 8.1:-11708545 MS.gene59639:CDS
GGTACTTGATATCAGGAAAA+TGG 0.231212 8.1:+11708585 None:intergenic
TTCTAGAGCATGACTCATTA+TGG 0.262944 8.1:-11708181 MS.gene59639:CDS
TTAGATGAAGTAATGTATTC+AGG 0.273296 8.1:-11708659 MS.gene59639:CDS
ACTTCACCGGCAACCATAAT+AGG 0.287783 8.1:+11709134 None:intergenic
TTAGAGAATACTTTAGTCTA+TGG 0.289287 8.1:-11708400 MS.gene59639:CDS
ATTCTGTATACACCGCAAAT+TGG 0.290281 8.1:+11708132 None:intergenic
CGAGTATGGTCAAAATCATT+TGG 0.326790 8.1:+11708446 None:intergenic
ATACGTATTTATATGGATTT+GGG 0.347093 8.1:-11708736 MS.gene59639:CDS
CTTAATCCTATTATGGTTGC+CGG 0.358044 8.1:-11709140 MS.gene59639:CDS
TCTTTAATGGGTCTATTCAT+TGG 0.374417 8.1:-11708532 MS.gene59639:CDS
GAGTAGGGTTGGTCTTTAAT+GGG 0.380532 8.1:-11708544 MS.gene59639:CDS
GATGATCCATTACTTTCAAC+TGG 0.401175 8.1:-11708158 MS.gene59639:CDS
TACTTTAGTCTATGGGCTAT+GGG 0.407162 8.1:-11708392 MS.gene59639:CDS
TTCTGTATACACCGCAAATT+GGG 0.414284 8.1:+11708133 None:intergenic
GTCTTTCAAGCTACTACATA+TGG 0.414794 8.1:-11708829 MS.gene59639:CDS
TTGGGACGGTACTTGATATC+AGG 0.417403 8.1:+11708578 None:intergenic
TCAAGAGTGTTTGTAAGTCT+TGG 0.426438 8.1:-11709099 MS.gene59639:CDS
TTAGGCTTGCATGTTGTCAC+CGG 0.436965 8.1:+11708094 None:intergenic
CTCTTGATGTCATCCCCTCT+CGG 0.442138 8.1:-11708295 MS.gene59639:CDS
GGTATCATACACTTGAGATA+TGG 0.444256 8.1:-11708370 MS.gene59639:CDS
GTTGGAAGAGATGACAAAAC+TGG 0.445047 8.1:-11708233 MS.gene59639:CDS
TCTAGAGCATGACTCATTAT+GGG 0.456461 8.1:-11708180 MS.gene59639:CDS
TAGAGAATACTTTAGTCTAT+GGG 0.461181 8.1:-11708399 MS.gene59639:CDS
AATACAAAGTACAATCATCT+TGG 0.466827 8.1:-11708337 MS.gene59639:CDS
GTACTTGATATCAGGAAAAT+GGG 0.474629 8.1:+11708586 None:intergenic
TCGTCTGTGAGTGTGTGTTT+TGG 0.478892 8.1:+11709024 None:intergenic
CTTAATGAATCACATGGCTA+TGG 0.485728 8.1:-11708767 MS.gene59639:CDS
ATACTTTAGTCTATGGGCTA+TGG 0.486084 8.1:-11708393 MS.gene59639:CDS
GAATCTTTGCTTTCACTCCC+CGG 0.486445 8.1:-11708113 MS.gene59639:CDS
TTCAACTGGATCCCAATTTG+CGG 0.489142 8.1:-11708144 MS.gene59639:CDS
TGAAGTAATGTATTCAGGAT+TGG 0.492895 8.1:-11708654 MS.gene59639:CDS
TCTCATTGAGAGATAATATG+TGG 0.495202 8.1:-11708625 MS.gene59639:CDS
TGGTCAAAATCATTTGGAAA+AGG 0.506509 8.1:+11708452 None:intergenic
TGAATTAAAAGATGATTACT+TGG 0.507461 8.1:-11708708 MS.gene59639:CDS
TGTCTCTCAACTCCGGTGGA+TGG 0.512165 8.1:+11708803 None:intergenic
CCCTACTCTAGGCTCAGGAT+TGG 0.512525 8.1:+11708559 None:intergenic
ATTAAAAGATGATTACTTGG+TGG 0.520605 8.1:-11708705 MS.gene59639:CDS
ACCAACCCTACTCTAGGCTC+AGG 0.522644 8.1:+11708554 None:intergenic
CCTACTCTAGGCTCAGGATT+GGG 0.526604 8.1:+11708560 None:intergenic
TAGGCTTGCATGTTGTCACC+GGG 0.528934 8.1:+11708095 None:intergenic
TGGGATCCAGTTGAAAGTAA+TGG 0.537735 8.1:+11708152 None:intergenic
TCCTGAGCCTAGAGTAGGGT+TGG 0.540414 8.1:-11708555 MS.gene59639:CDS
AAAATTATAAGTTCATGTAG+AGG 0.556372 8.1:-11708869 MS.gene59639:CDS
TTAAAGACCAACCCTACTCT+AGG 0.572534 8.1:+11708548 None:intergenic
CCAATCCTGAGCCTAGAGTA+GGG 0.576939 8.1:-11708559 MS.gene59639:CDS
ATTGGGATAAAGTGCCGAGA+GGG 0.579058 8.1:+11708281 None:intergenic
CCCAATCCTGAGCCTAGAGT+AGG 0.582388 8.1:-11708560 MS.gene59639:CDS
GGTCGGTATATATGTTGCAT+AGG 0.596918 8.1:+11708928 None:intergenic
CTCTCTCTTAATGAATCACA+TGG 0.600310 8.1:-11708773 MS.gene59639:CDS
TAATATGTGGCATGTAATCG+AGG 0.602408 8.1:-11708612 MS.gene59639:CDS
ATGCTGAAGTATAATTACAA+AGG 0.616769 8.1:-11708209 MS.gene59639:CDS
AGGTATTTGTCTCTCAACTC+CGG 0.624445 8.1:+11708796 None:intergenic
AAATGTGAATTAGCGAAACA+AGG 0.625802 8.1:+11709058 None:intergenic
TGTGATTCATTAAGAGAGAG+AGG 0.625850 8.1:+11708776 None:intergenic
TATTTGTCTCTCAACTCCGG+TGG 0.628228 8.1:+11708799 None:intergenic
TACATATGGAATCCATCCAC+CGG 0.631502 8.1:-11708815 MS.gene59639:CDS
AAACGTATAAGAGACTTCAC+CGG 0.638094 8.1:+11709121 None:intergenic
AATATGTGGCATGTAATCGA+GGG 0.644013 8.1:-11708611 MS.gene59639:CDS
CTCTAGGCTCAGGATTGGGA+CGG 0.645228 8.1:+11708564 None:intergenic
ACAGTGATGTACAGTCGTAG+AGG 0.649222 8.1:-11709217 None:intergenic
ACTTTAGTCTATGGGCTATG+GGG 0.654644 8.1:-11708391 MS.gene59639:CDS
TTGGGATAAAGTGCCGAGAG+GGG 0.664166 8.1:+11708282 None:intergenic
ATTAAGATGATCAATTCATG+AGG 0.664573 8.1:+11709157 None:intergenic
TAGGCAGCATCATAGTCTAG+AGG 0.679982 8.1:+11708947 None:intergenic
AGGCTTGCATGTTGTCACCG+GGG 0.724966 8.1:+11708096 None:intergenic
TATTGGGATAAAGTGCCGAG+AGG 0.743389 8.1:+11708280 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATAAGTTCATGTAG+AGG - chr8.1:11708436-11708455 MS.gene59639:CDS 20.0%
!! AATACGTATTTATATGGATT+TGG - chr8.1:11708568-11708587 MS.gene59639:CDS 20.0%
!! AATCGTAATACGTATTTATA+TGG - chr8.1:11708562-11708581 MS.gene59639:CDS 20.0%
!! ATACGTATTTATATGGATTT+GGG - chr8.1:11708569-11708588 MS.gene59639:CDS 20.0%
!! TGAATTAAAAGATGATTACT+TGG - chr8.1:11708597-11708616 MS.gene59639:CDS 20.0%
!!! ACTTATTTTCATGTCAAATA+TGG - chr8.1:11708303-11708322 MS.gene59639:CDS 20.0%
!!! TAATATAACAACCAGATTTT+GGG + chr8.1:11708417-11708436 None:intergenic 20.0%
!!! TTAATATAACAACCAGATTT+TGG + chr8.1:11708418-11708437 None:intergenic 20.0%
! AATACAAAGTACAATCATCT+TGG - chr8.1:11708968-11708987 MS.gene59639:CDS 25.0%
! ATGCTGAAGTATAATTACAA+AGG - chr8.1:11709096-11709115 MS.gene59639:CDS 25.0%
! ATTAAAAGATGATTACTTGG+TGG - chr8.1:11708600-11708619 MS.gene59639:CDS 25.0%
! ATTAAGATGATCAATTCATG+AGG + chr8.1:11708151-11708170 None:intergenic 25.0%
! TAGAGAATACTTTAGTCTAT+GGG - chr8.1:11708906-11708925 MS.gene59639:CDS 25.0%
! TGATCATCTTAATCCTATTA+TGG - chr8.1:11708158-11708177 MS.gene59639:CDS 25.0%
! TTAGAGAATACTTTAGTCTA+TGG - chr8.1:11708905-11708924 MS.gene59639:CDS 25.0%
! TTAGATGAAGTAATGTATTC+AGG - chr8.1:11708646-11708665 MS.gene59639:CDS 25.0%
!! AATATAACAACCAGATTTTG+GGG + chr8.1:11708416-11708435 None:intergenic 25.0%
!!! CACTTTTTGTAGAACATATT+GGG + chr8.1:11709044-11709063 None:intergenic 25.0%
AAATGTGAATTAGCGAAACA+AGG + chr8.1:11708250-11708269 None:intergenic 30.0%
CCAATATGTTCTACAAAAAG+TGG - chr8.1:11709042-11709061 MS.gene59639:CDS 30.0%
GTACTTGATATCAGGAAAAT+GGG + chr8.1:11708722-11708741 None:intergenic 30.0%
TCTCATTGAGAGATAATATG+TGG - chr8.1:11708680-11708699 MS.gene59639:CDS 30.0%
TGAAGTAATGTATTCAGGAT+TGG - chr8.1:11708651-11708670 MS.gene59639:CDS 30.0%
TGGTCAAAATCATTTGGAAA+AGG + chr8.1:11708856-11708875 None:intergenic 30.0%
! AATCACATTTTTCACGAGTA+TGG + chr8.1:11708876-11708895 None:intergenic 30.0%
! TCGTGAAAAATGTGATTTGT+GGG - chr8.1:11708879-11708898 MS.gene59639:CDS 30.0%
! TCTTTAATGGGTCTATTCAT+TGG - chr8.1:11708773-11708792 MS.gene59639:CDS 30.0%
!!! CCACTTTTTGTAGAACATAT+TGG + chr8.1:11709045-11709064 None:intergenic 30.0%
AAACGTATAAGAGACTTCAC+CGG + chr8.1:11708187-11708206 None:intergenic 35.0%
AATATGTGGCATGTAATCGA+GGG - chr8.1:11708694-11708713 MS.gene59639:CDS 35.0%
ACAAAAAGTGGTGACATTGT+TGG - chr8.1:11709054-11709073 MS.gene59639:CDS 35.0%
ATTCTGTATACACCGCAAAT+TGG + chr8.1:11709176-11709195 None:intergenic 35.0%
CGAGTATGGTCAAAATCATT+TGG + chr8.1:11708862-11708881 None:intergenic 35.0%
CTCGTGAAAAATGTGATTTG+TGG - chr8.1:11708878-11708897 MS.gene59639:CDS 35.0%
CTCTCTCTTAATGAATCACA+TGG - chr8.1:11708532-11708551 MS.gene59639:CDS 35.0%
CTTAATCCTATTATGGTTGC+CGG - chr8.1:11708165-11708184 MS.gene59639:CDS 35.0%
CTTAATGAATCACATGGCTA+TGG - chr8.1:11708538-11708557 MS.gene59639:CDS 35.0%
GATGATCCATTACTTTCAAC+TGG - chr8.1:11709147-11709166 MS.gene59639:CDS 35.0%
GGTACTTGATATCAGGAAAA+TGG + chr8.1:11708723-11708742 None:intergenic 35.0%
GGTATCATACACTTGAGATA+TGG - chr8.1:11708935-11708954 MS.gene59639:CDS 35.0%
GTCTTTCAAGCTACTACATA+TGG - chr8.1:11708476-11708495 MS.gene59639:CDS 35.0%
TAATATGTGGCATGTAATCG+AGG - chr8.1:11708693-11708712 MS.gene59639:CDS 35.0%
TGTGATTCATTAAGAGAGAG+AGG + chr8.1:11708532-11708551 None:intergenic 35.0%
TTCTGTATACACCGCAAATT+GGG + chr8.1:11709175-11709194 None:intergenic 35.0%
! ATACTTTAGTCTATGGGCTA+TGG - chr8.1:11708912-11708931 MS.gene59639:CDS 35.0%
! TACTTTAGTCTATGGGCTAT+GGG - chr8.1:11708913-11708932 MS.gene59639:CDS 35.0%
! TCTAGAGCATGACTCATTAT+GGG - chr8.1:11709125-11709144 MS.gene59639:CDS 35.0%
!! AGTTTTATGACCCCAAAATC+TGG - chr8.1:11708403-11708422 MS.gene59639:CDS 35.0%
!! TCAAGAGTGTTTGTAAGTCT+TGG - chr8.1:11708206-11708225 MS.gene59639:CDS 35.0%
!! TTCTAGAGCATGACTCATTA+TGG - chr8.1:11709124-11709143 MS.gene59639:CDS 35.0%
!!! AGATTTTGGGGTCATAAAAC+TGG + chr8.1:11708404-11708423 None:intergenic 35.0%
!!! ATTTTGGGGTCATAAAACTG+GGG + chr8.1:11708402-11708421 None:intergenic 35.0%
!!! GATTTTGGGGTCATAAAACT+GGG + chr8.1:11708403-11708422 None:intergenic 35.0%
AGGTATTTGTCTCTCAACTC+CGG + chr8.1:11708512-11708531 None:intergenic 40.0%
GGTCGGTATATATGTTGCAT+AGG + chr8.1:11708380-11708399 None:intergenic 40.0%
GTTGGAAGAGATGACAAAAC+TGG - chr8.1:11709072-11709091 MS.gene59639:CDS 40.0%
TACATATGGAATCCATCCAC+CGG - chr8.1:11708490-11708509 MS.gene59639:CDS 40.0%
TAGAGGAAAAATACGCATGG+AGG - chr8.1:11708105-11708124 MS.gene59639:CDS 40.0%
TCGTAGAGGAAAAATACGCA+TGG - chr8.1:11708102-11708121 MS.gene59639:CDS 40.0%
TGGGATCCAGTTGAAAGTAA+TGG + chr8.1:11709156-11709175 None:intergenic 40.0%
TTAAAGACCAACCCTACTCT+AGG + chr8.1:11708760-11708779 None:intergenic 40.0%
TTCAACTGGATCCCAATTTG+CGG - chr8.1:11709161-11709180 MS.gene59639:CDS 40.0%
! ACTTTAGTCTATGGGCTATG+GGG - chr8.1:11708914-11708933 MS.gene59639:CDS 40.0%
!! AGAGTAGGGTTGGTCTTTAA+TGG - chr8.1:11708760-11708779 MS.gene59639:CDS 40.0%
!! GAGTAGGGTTGGTCTTTAAT+GGG - chr8.1:11708761-11708780 MS.gene59639:CDS 40.0%
!!! TTTTGGGGTCATAAAACTGG+GGG + chr8.1:11708401-11708420 None:intergenic 40.0%
ACTTCACCGGCAACCATAAT+AGG + chr8.1:11708174-11708193 None:intergenic 45.0%
AGGAAAAATACGCATGGAGG+AGG - chr8.1:11708108-11708127 MS.gene59639:CDS 45.0%
GAATCTTTGCTTTCACTCCC+CGG - chr8.1:11709192-11709211 MS.gene59639:CDS 45.0%
TAGGCAGCATCATAGTCTAG+AGG + chr8.1:11708361-11708380 None:intergenic 45.0%
TATTTGTCTCTCAACTCCGG+TGG + chr8.1:11708509-11708528 None:intergenic 45.0%
TTAGGCTTGCATGTTGTCAC+CGG + chr8.1:11709214-11709233 None:intergenic 45.0%
TTGGGACGGTACTTGATATC+AGG + chr8.1:11708730-11708749 None:intergenic 45.0%
! TCGTCTGTGAGTGTGTGTTT+TGG + chr8.1:11708284-11708303 None:intergenic 45.0%
!! ATTGGGATAAAGTGCCGAGA+GGG + chr8.1:11709027-11709046 None:intergenic 45.0%
!! TATTGGGATAAAGTGCCGAG+AGG + chr8.1:11709028-11709047 None:intergenic 45.0%
CCAATCCTGAGCCTAGAGTA+GGG - chr8.1:11708746-11708765 MS.gene59639:CDS 50.0%
CCTACTCTAGGCTCAGGATT+GGG + chr8.1:11708748-11708767 None:intergenic 50.0%
CTCTTGATGTCATCCCCTCT+CGG - chr8.1:11709010-11709029 MS.gene59639:CDS 50.0%
TAGGCTTGCATGTTGTCACC+GGG + chr8.1:11709213-11709232 None:intergenic 50.0%
!! TTGGGATAAAGTGCCGAGAG+GGG + chr8.1:11709026-11709045 None:intergenic 50.0%
ACCAACCCTACTCTAGGCTC+AGG + chr8.1:11708754-11708773 None:intergenic 55.0%
AGGCTTGCATGTTGTCACCG+GGG + chr8.1:11709212-11709231 None:intergenic 55.0%
CCCAATCCTGAGCCTAGAGT+AGG - chr8.1:11708745-11708764 MS.gene59639:CDS 55.0%
CCCTACTCTAGGCTCAGGAT+TGG + chr8.1:11708749-11708768 None:intergenic 55.0%
CTCTAGGCTCAGGATTGGGA+CGG + chr8.1:11708744-11708763 None:intergenic 55.0%
GGGGTCATAAAACTGGGGGT+CGG + chr8.1:11708397-11708416 None:intergenic 55.0%
TCCTGAGCCTAGAGTAGGGT+TGG - chr8.1:11708750-11708769 MS.gene59639:CDS 55.0%
TGTCTCTCAACTCCGGTGGA+TGG + chr8.1:11708505-11708524 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 11708094 11709233 11708094 ID=MS.gene59639
chr8.1 mRNA 11708094 11709233 11708094 ID=MS.gene59639.t1;Parent=MS.gene59639
chr8.1 exon 11708094 11709233 11708094 ID=MS.gene59639.t1.exon1;Parent=MS.gene59639.t1
chr8.1 CDS 11708094 11709233 11708094 ID=cds.MS.gene59639.t1;Parent=MS.gene59639.t1
Gene Sequence

>MS.gene59639

ATGTACAGTCGTAGAGGAAAAATACGCATGGAGGAGGACACGACAGTGTATCTTCCTCATGAATTGATCATCTTAATCCTATTATGGTTGCCGGTGAAGTCTCTTATACGTTTCAAGAGTGTTTGTAAGTCTTGGTTTTCTCTCATCTCTGATCCTTGTTTCGCTAATTCACATTTTGAACTTACTACCAAAACACACACTCACAGACGACTTATTTTCATGTCAAATATGGTTAGATCTACACTATCAATAGATTTTGAAGAACCTCTAGACTATGATGCTGCCTATGCAACATATATACCGACCCCCAGTTTTATGACCCCAAAATCTGGTTGTTATATTAAAATTATAAGTTCATGTAGAGGCTTTATATTTTTGCATCGTCTTTCAAGCTACTACATATGGAATCCATCCACCGGAGTTGAGAGACAAATACCTCTCTCTCTTAATGAATCACATGGCTATGGAAATCGTAATACGTATTTATATGGATTTGGGTACGATGAATTAAAAGATGATTACTTGGTGGTTATGTTCTATTTTAATAAATTCTTAGATGAAGTAATGTATTCAGGATTGGAGTTTTTCTCATTGAGAGATAATATGTGGCATGTAATCGAGGGTACCCATTTTCCTGATATCAAGTACCGTCCCAATCCTGAGCCTAGAGTAGGGTTGGTCTTTAATGGGTCTATTCATTGGTCATCGATGTATGATATTCTTGCATTTGATTTAATTGAAAGAAAACTTTTAGTGATGCCTTTTCCAAATGATTTTGACCATACTCGTGAAAAATGTGATTTGTGGGTATTTAGAGAATACTTTAGTCTATGGGCTATGGGGTATCATACACTTGAGATATGGATGATGAAAGAATACAAAGTACAATCATCTTGGACTAAGATTCTTATTCTTTCTCTTGATGTCATCCCCTCTCGGCACTTTATCCCAATATGTTCTACAAAAAGTGGTGACATTGTTGGAAGAGATGACAAAACTGGAATGCTGAAGTATAATTACAAAGGAGAGCTTCTAGAGCATGACTCATTATGGGATGATCCATTACTTTCAACTGGATCCCAATTTGCGGTGTATACAGAATCTTTGCTTTCACTCCCCGGTGACAACATGCAAGCCTAA

Protein sequence

>MS.gene59639.t1

MYSRRGKIRMEEDTTVYLPHELIILILLWLPVKSLIRFKSVCKSWFSLISDPCFANSHFELTTKTHTHRRLIFMSNMVRSTLSIDFEEPLDYDAAYATYIPTPSFMTPKSGCYIKIISSCRGFIFLHRLSSYYIWNPSTGVERQIPLSLNESHGYGNRNTYLYGFGYDELKDDYLVVMFYFNKFLDEVMYSGLEFFSLRDNMWHVIEGTHFPDIKYRPNPEPRVGLVFNGSIHWSSMYDILAFDLIERKLLVMPFPNDFDHTREKCDLWVFREYFSLWAMGYHTLEIWMMKEYKVQSSWTKILILSLDVIPSRHFIPICSTKSGDIVGRDDKTGMLKYNYKGELLEHDSLWDDPLLSTGSQFAVYTESLLSLPGDNMQA