AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82082

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82082.t1 MTR_4g116330 54.237 236 82 2 28 263 171 380 8.61e-75 233
MS.gene82082.t1 MTR_4g116320 49.638 276 93 3 8 261 5 256 6.01e-73 224
MS.gene82082.t1 MTR_3g103020 51.667 240 87 4 27 263 165 378 1.02e-67 214
MS.gene82082.t1 MTR_6g060650 50.840 238 89 3 25 262 163 372 2.77e-64 205
MS.gene82082.t1 MTR_4g109270 50.622 241 85 5 25 263 156 364 2.88e-63 202
MS.gene82082.t1 MTR_4g117720 50.207 241 95 7 25 263 161 378 7.61e-62 199
MS.gene82082.t1 MTR_3g034180 49.798 247 88 6 26 263 270 489 3.77e-61 200
MS.gene82082.t1 MTR_4g117850 47.009 234 97 4 27 256 163 373 1.51e-60 196
MS.gene82082.t1 MTR_4g109280 49.772 219 80 5 48 263 168 359 1.77e-59 192
MS.gene82082.t1 MTR_3g034130 53.807 197 80 3 26 213 156 350 2.75e-58 190
MS.gene82082.t1 MTR_4g023130 47.881 236 86 6 26 260 111 310 1.48e-55 181
MS.gene82082.t1 MTR_4g023090 44.915 236 103 6 28 258 166 379 3.16e-55 182
MS.gene82082.t1 MTR_4g023080 46.610 236 89 6 26 260 152 351 1.72e-54 179
MS.gene82082.t1 MTR_4g122850 47.107 242 97 8 26 263 150 364 1.96e-54 180
MS.gene82082.t1 MTR_4g118380 50.500 200 76 4 25 210 165 355 2.58e-54 179
MS.gene82082.t1 MTR_3g034160 47.541 244 92 5 28 262 158 374 2.62e-53 177
MS.gene82082.t1 MTR_4g021785 46.186 236 91 5 26 260 152 352 3.35e-53 176
MS.gene82082.t1 MTR_4g094365 44.167 240 102 5 26 263 155 364 4.86e-53 176
MS.gene82082.t1 MTR_8g040935 44.889 225 99 4 42 263 6 208 1.19e-52 170
MS.gene82082.t1 MTR_8g433030 44.872 234 97 6 28 258 133 337 1.37e-51 171
MS.gene82082.t1 MTR_8g032390 44.872 234 97 6 28 258 166 370 5.57e-51 171
MS.gene82082.t1 MTR_4g116330 44.492 236 66 3 28 263 171 341 1.76e-50 169
MS.gene82082.t1 MTR_4g023070 41.365 249 105 5 26 260 146 367 4.97e-50 168
MS.gene82082.t1 MTR_4g023120 40.476 252 109 5 26 263 146 370 1.04e-47 162
MS.gene82082.t1 MTR_4g023380 43.697 238 83 5 50 263 169 379 2.78e-47 161
MS.gene82082.t1 MTR_4g117780 44.398 241 100 6 27 263 157 367 5.18e-47 160
MS.gene82082.t1 MTR_4g117770 43.568 241 102 6 27 263 157 367 1.09e-46 159
MS.gene82082.t1 MTR_4g117810 43.568 241 102 6 27 263 157 367 1.09e-46 159
MS.gene82082.t1 MTR_6g463430 42.544 228 100 6 38 263 4 202 1.74e-43 146
MS.gene82082.t1 MTR_5g070080 44.017 234 103 7 26 258 174 380 3.22e-43 151
MS.gene82082.t1 MTR_4g118400 42.723 213 76 4 48 256 123 293 5.29e-43 148
MS.gene82082.t1 MTR_5g097210 42.373 236 102 7 26 256 150 356 1.20e-42 149
MS.gene82082.t1 MTR_4g023200 42.500 240 97 8 26 260 154 357 1.73e-42 148
MS.gene82082.t1 MTR_4g023190 42.500 240 96 8 26 260 154 356 1.92e-42 148
MS.gene82082.t1 MTR_8g433040 43.983 241 93 7 26 263 163 364 3.52e-42 148
MS.gene82082.t1 MTR_8g032380 43.983 241 93 7 26 263 163 364 3.52e-42 148
MS.gene82082.t1 MTR_4g118370 38.136 236 97 5 25 256 63 253 2.09e-40 140
MS.gene82082.t1 MTR_1g055195 42.798 243 87 10 26 256 269 471 9.40e-40 144
MS.gene82082.t1 MTR_5g070088 38.723 235 118 3 26 258 170 380 1.01e-39 142
MS.gene82082.t1 MTR_6g034720 71.579 95 27 0 26 120 80 174 4.57e-39 135
MS.gene82082.t1 MTR_4g023150 41.250 240 100 9 26 260 154 357 5.28e-39 139
MS.gene82082.t1 MTR_4g117750 39.754 244 106 7 25 256 138 352 1.30e-36 135
MS.gene82082.t1 MTR_4g117750 51.852 135 41 3 124 258 368 478 2.60e-29 115
MS.gene82082.t1 MTR_5g070130 36.667 240 117 6 26 256 156 369 3.21e-36 132
MS.gene82082.t1 MTR_1g055250 39.167 240 112 7 12 224 21 253 4.03e-36 131
MS.gene82082.t1 MTR_4g117530 35.021 237 89 4 27 263 82 253 1.38e-35 127
MS.gene82082.t1 MTR_4g117870 39.076 238 83 6 26 263 92 267 4.15e-35 127
MS.gene82082.t1 MTR_4g023440 36.502 263 93 7 6 263 139 332 5.27e-35 128
MS.gene82082.t1 MTR_1g055175 37.719 228 103 8 45 263 4 201 2.12e-33 120
MS.gene82082.t1 MTR_1g055135 36.992 246 107 8 26 256 156 368 2.32e-32 122
MS.gene82082.t1 MTR_4g121580 41.148 209 75 8 26 223 164 335 1.94e-31 120
MS.gene82082.t1 MTR_7g079400 37.273 220 109 7 50 263 141 337 2.33e-31 119
MS.gene82082.t1 MTR_7g079370 38.017 242 110 11 25 256 138 349 4.11e-31 118
MS.gene82082.t1 MTR_1g055165 41.530 183 78 5 83 263 163 318 1.36e-29 114
MS.gene82082.t1 MTR_4g118360 48.344 151 50 6 114 262 1 125 2.85e-29 107
MS.gene82082.t1 MTR_5g023000 52.459 122 34 2 142 263 2 99 6.48e-28 103
MS.gene82082.t1 MTR_8g102520 33.182 220 114 5 50 263 130 322 3.79e-27 107
MS.gene82082.t1 MTR_4g114700 35.043 234 70 7 28 254 60 218 1.25e-24 99.0
MS.gene82082.t1 MTR_8g098830 35.266 207 112 7 12 212 8 198 1.74e-24 98.2
MS.gene82082.t1 MTR_4g122860 34.322 236 96 8 33 263 139 320 4.41e-24 99.4
MS.gene82082.t1 MTR_7g079420 34.599 237 93 9 25 256 958 1137 4.44e-24 101
MS.gene82082.t1 MTR_4g117430 49.565 115 49 2 26 140 49 154 2.01e-23 93.2
MS.gene82082.t1 MTR_8g013010 46.610 118 57 2 26 143 203 314 3.00e-23 96.7
MS.gene82082.t1 MTR_7g079450 37.423 163 65 6 98 256 1 130 2.73e-19 82.0
MS.gene82082.t1 MTR_2g048580 30.769 221 105 10 50 260 158 340 4.00e-19 85.9
MS.gene82082.t1 MTR_4g116340 53.247 77 34 1 28 104 173 247 1.66e-16 77.0
MS.gene82082.t1 MTR_7g117720 47.170 106 34 3 152 256 186 270 5.55e-15 73.2
MS.gene82082.t1 MTR_4g023430 37.255 102 43 1 162 263 142 222 1.67e-12 65.5
MS.gene82082.t1 MTR_1g055145 33.553 152 89 6 83 228 132 277 1.06e-11 63.9
MS.gene82082.t1 MTR_8g013005 46.341 82 20 2 181 262 1 58 1.79e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 51 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTATTGCATTTGATTTAA+TGG 0.159177 7.3:-58453465 MS.gene82082:CDS
GATTGGGGCTTGTGGGTATT+TGG 0.174170 7.3:-58453389 MS.gene82082:CDS
CATCTTGTTCTTCCTATTGA+TGG 0.208153 7.3:-58453272 MS.gene82082:CDS
AAAGTAGGTCTGTTCTTTAA+TGG 0.237963 7.3:-58453533 MS.gene82082:CDS
TGACCATGAGCCTAGGGATT+GGG 0.296728 7.3:-58453405 MS.gene82082:CDS
TCGTCGTCCTGATCTATTTA+TGG 0.296986 7.3:-58453492 MS.gene82082:CDS
ACGGTCACTTTGGATCTAAT+TGG 0.299760 7.3:+58453044 None:intergenic
TCTTTAATGGGTCTATTCAT+TGG 0.323982 7.3:-58453520 MS.gene82082:CDS
CTGCCTGATGATTTGTCAAT+TGG 0.325785 7.3:-58454147 MS.gene82082:CDS
TTCGTTGTAGAGTTGAAATA+TGG 0.329891 7.3:-58453334 MS.gene82082:CDS
GCCTAGGGATTGGGGCTTGT+GGG 0.346569 7.3:-58453396 MS.gene82082:CDS
AAGTAGGTCTGTTCTTTAAT+GGG 0.347992 7.3:-58453532 MS.gene82082:CDS
AATACAAAGTGCATTCATAT+TGG 0.369394 7.3:-58453301 MS.gene82082:CDS
TGATGATTACTTGGTGGTTT+CGG 0.378979 7.3:-58453684 MS.gene82082:CDS
TGGAATCTTGCAGAGGTTGC+CGG 0.403436 7.3:-58454127 MS.gene82082:intron
TAATGGGTCTATTCATTGGT+TGG 0.409383 7.3:-58453516 MS.gene82082:CDS
AGCCTAGGGATTGGGGCTTG+TGG 0.414020 7.3:-58453397 MS.gene82082:CDS
ATTAGTACGGATGGCCGAAC+TGG 0.419772 7.3:-58453197 MS.gene82082:CDS
GGCTCATGGTCAAAACAATC+TGG 0.423919 7.3:+58453416 None:intergenic
TTGACCATGAGCCTAGGGAT+TGG 0.440517 7.3:-58453406 MS.gene82082:CDS
ATTCCAATTGACAAATCATC+AGG 0.448746 7.3:+58454144 None:intergenic
TCACGTTGAGAAGTAATACT+TGG 0.449741 7.3:-58453607 MS.gene82082:CDS
CTCTGTATACACGGTCACTT+TGG 0.455301 7.3:+58453034 None:intergenic
ATAGTGGAAATGCCATCAAT+AGG 0.462081 7.3:+58453260 None:intergenic
GACCATGAGCCTAGGGATTG+GGG 0.464031 7.3:-58453404 MS.gene82082:CDS
TTGCATTTGATTTAATGGAA+TGG 0.469528 7.3:-58453460 MS.gene82082:CDS
GAGTCCCTGCTTTCACTCTC+CGG 0.477310 7.3:-58453014 MS.gene82082:CDS
AGTGATACATCCTTAGCCTT+AGG 0.480409 7.3:-58453656 MS.gene82082:CDS
TGGTCAAAACAATCTGGAAA+AGG 0.492421 7.3:+58453422 None:intergenic
ATCTCTCAGTCTATTTGCTA+AGG 0.492623 7.3:-58453363 MS.gene82082:CDS
CCAGTCAACTGATGATTACT+TGG 0.502794 7.3:-58453693 MS.gene82082:intron
TATTGGGGAAAAGAATATAG+TGG 0.504429 7.3:+58453244 None:intergenic
TATACTTCAACAATCCAGTT+CGG 0.512765 7.3:+58453183 None:intergenic
ACAACATCCATAAATAGATC+AGG 0.513968 7.3:+58453485 None:intergenic
TTGAAGTCGACCATCACAAA+AGG 0.531983 7.3:+58453130 None:intergenic
GTCAACTGATGATTACTTGG+TGG 0.533323 7.3:-58453690 MS.gene82082:CDS
AAACATTACTACTATTGTGA+TGG 0.536641 7.3:-58453074 MS.gene82082:CDS
AAACATAATACCTAAGGCTA+AGG 0.546030 7.3:+58453646 None:intergenic
ACGTGAAAACATAATACCTA+AGG 0.560811 7.3:+58453640 None:intergenic
AAGTGGTGACATCATTAGTA+CGG 0.564793 7.3:-58453210 MS.gene82082:CDS
TCGTTGTAGAGTTGAAATAT+GGG 0.573217 7.3:-58453333 MS.gene82082:CDS
GTCACTAATCAGCTCAAAGT+AGG 0.581545 7.3:-58453548 MS.gene82082:CDS
AGCCCCAATCCCTAGGCTCA+TGG 0.595486 7.3:+58453402 None:intergenic
GGTGACATCATTAGTACGGA+TGG 0.598138 7.3:-58453206 MS.gene82082:CDS
TTATACTTGCACATTAACAC+CGG 0.600834 7.3:+58452995 None:intergenic
ACCCACAAGCCCCAATCCCT+AGG 0.605519 7.3:+58453395 None:intergenic
TAACACCGGAGAGTGAAAGC+AGG 0.606570 7.3:+58453009 None:intergenic
TAATACTTGGAAAGAACTTG+AGG 0.609650 7.3:-58453594 MS.gene82082:CDS
TGTCAATTGGAATCTTGCAG+AGG 0.613128 7.3:-58454134 MS.gene82082:CDS
AACACCGGAGAGTGAAAGCA+GGG 0.645235 7.3:+58453010 None:intergenic
AAGCAGGGACTCTGTATACA+CGG 0.671507 7.3:+58453025 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGATTGAAATAATCAGATT+GGG + chr7.3:58453304-58453323 None:intergenic 20.0%
!! TTTGATTGAAATAATCAGAT+TGG + chr7.3:58453305-58453324 None:intergenic 20.0%
!!! TGTTATTGCATTTGATTTAA+TGG - chr7.3:58453710-58453729 MS.gene82082:intron 20.0%
! AAACATTACTACTATTGTGA+TGG - chr7.3:58454101-58454120 MS.gene82082:intron 25.0%
! AAACGTATAAGATACTTTAC+CGG + chr7.3:58453070-58453089 None:intergenic 25.0%
! AATACAAAGTGCATTCATAT+TGG - chr7.3:58453874-58453893 MS.gene82082:intron 25.0%
! ATATGGAAAACAGGAATATT+TGG + chr7.3:58453448-58453467 None:intergenic 25.0%
! TGATTGAAATAATCAGATTG+GGG + chr7.3:58453303-58453322 None:intergenic 25.0%
!! AAATATTCCTGTTTTCCATA+TGG - chr7.3:58453447-58453466 MS.gene82082:CDS 25.0%
!! TTGCATTTGATTTAATGGAA+TGG - chr7.3:58453715-58453734 MS.gene82082:intron 25.0%
!!! GATTTTGAAACATCATCATT+TGG - chr7.3:58453235-58453254 MS.gene82082:CDS 25.0%
AAACATAATACCTAAGGCTA+AGG + chr7.3:58453532-58453551 None:intergenic 30.0%
AAAGTAGGTCTGTTCTTTAA+TGG - chr7.3:58453642-58453661 MS.gene82082:CDS 30.0%
AAATCTAACGATAGTGTTTC+TGG + chr7.3:58453214-58453233 None:intergenic 30.0%
AAGTAGGTCTGTTCTTTAAT+GGG - chr7.3:58453643-58453662 MS.gene82082:CDS 30.0%
ACAACATCCATAAATAGATC+AGG + chr7.3:58453693-58453712 None:intergenic 30.0%
ACGTGAAAACATAATACCTA+AGG + chr7.3:58453538-58453557 None:intergenic 30.0%
ATTCCAATTGACAAATCATC+AGG + chr7.3:58453034-58453053 None:intergenic 30.0%
GGAATATTTGGCATCTAAAT+TGG + chr7.3:58453436-58453455 None:intergenic 30.0%
TAATACTTGGAAAGAACTTG+AGG - chr7.3:58453581-58453600 MS.gene82082:CDS 30.0%
TATACTTCAACAATCCAGTT+CGG + chr7.3:58453995-58454014 None:intergenic 30.0%
TATTGGGGAAAAGAATATAG+TGG + chr7.3:58453934-58453953 None:intergenic 30.0%
TCGTTGTAGAGTTGAAATAT+GGG - chr7.3:58453842-58453861 MS.gene82082:intron 30.0%
TTATACTTGCACATTAACAC+CGG + chr7.3:58454183-58454202 None:intergenic 30.0%
TTCGTTGTAGAGTTGAAATA+TGG - chr7.3:58453841-58453860 MS.gene82082:intron 30.0%
! ACTTTTTGTAGAGCATATTG+GGG + chr7.3:58453949-58453968 None:intergenic 30.0%
! TCTTTAATGGGTCTATTCAT+TGG - chr7.3:58453655-58453674 MS.gene82082:CDS 30.0%
!! CACTTTTTGTAGAGCATATT+GGG + chr7.3:58453950-58453969 None:intergenic 30.0%
AAGTGGTGACATCATTAGTA+CGG - chr7.3:58453965-58453984 MS.gene82082:intron 35.0%
AGGTATTTGTTTGTGAACTC+CGG + chr7.3:58453397-58453416 None:intergenic 35.0%
CAAATTGTTAGTTCGTGTAG+AGG - chr7.3:58453321-58453340 MS.gene82082:CDS 35.0%
CATCTTGTTCTTCCTATTGA+TGG - chr7.3:58453903-58453922 MS.gene82082:intron 35.0%
CCAAAAACCATATGGAAAAC+AGG + chr7.3:58453457-58453476 None:intergenic 35.0%
CCAATATGCTCTACAAAAAG+TGG - chr7.3:58453948-58453967 MS.gene82082:intron 35.0%
GCATCTAAATTGGAATCAAG+AGG + chr7.3:58453426-58453445 None:intergenic 35.0%
GGGTTTCATAAAACTAGACT+AGG + chr7.3:58453283-58453302 None:intergenic 35.0%
TCAAATGCATTCGTAAGTCT+TGG - chr7.3:58453089-58453108 MS.gene82082:CDS 35.0%
TCACGTTGAGAAGTAATACT+TGG - chr7.3:58453568-58453587 MS.gene82082:CDS 35.0%
TGGTCAAAACAATCTGGAAA+AGG + chr7.3:58453756-58453775 None:intergenic 35.0%
TGGTCATACCAAAAACCATA+TGG + chr7.3:58453465-58453484 None:intergenic 35.0%
! ATAGTGGAAATGCCATCAAT+AGG + chr7.3:58453918-58453937 None:intergenic 35.0%
! ATCTCTCAGTCTATTTGCTA+AGG - chr7.3:58453812-58453831 MS.gene82082:intron 35.0%
! CCTGTTTTCCATATGGTTTT+TGG - chr7.3:58453454-58453473 MS.gene82082:CDS 35.0%
! GAACATTACACCTTTTGTGA+TGG - chr7.3:58454035-58454054 MS.gene82082:intron 35.0%
! TAATGGGTCTATTCATTGGT+TGG - chr7.3:58453659-58453678 MS.gene82082:CDS 35.0%
! TGATGATTACTTGGTGGTTT+CGG - chr7.3:58453491-58453510 MS.gene82082:CDS 35.0%
!!! CCACTTTTTGTAGAGCATAT+TGG + chr7.3:58453951-58453970 None:intergenic 35.0%
CCAAGTAATCATCAGTTGAC+TGG + chr7.3:58453485-58453504 None:intergenic 40.0%
CCAGTCAACTGATGATTACT+TGG - chr7.3:58453482-58453501 MS.gene82082:CDS 40.0%
GTCAACTGATGATTACTTGG+TGG - chr7.3:58453485-58453504 MS.gene82082:CDS 40.0%
GTCACTAATCAGCTCAAAGT+AGG - chr7.3:58453627-58453646 MS.gene82082:CDS 40.0%
TATTTGTTTGTGAACTCCGG+TGG + chr7.3:58453394-58453413 None:intergenic 40.0%
TCGTCGTCCTGATCTATTTA+TGG - chr7.3:58453683-58453702 MS.gene82082:CDS 40.0%
TGTCAATTGGAATCTTGCAG+AGG - chr7.3:58453041-58453060 MS.gene82082:CDS 40.0%
TTGAAGTCGACCATCACAAA+AGG + chr7.3:58454048-58454067 None:intergenic 40.0%
TTGGAATCAAGAGGAGACAA+AGG + chr7.3:58453417-58453436 None:intergenic 40.0%
! AACTCTACGTGTGTGTTTTG+CGG + chr7.3:58453170-58453189 None:intergenic 40.0%
! ACGGTCACTTTGGATCTAAT+TGG + chr7.3:58454134-58454153 None:intergenic 40.0%
! AGTGATACATCCTTAGCCTT+AGG - chr7.3:58453519-58453538 MS.gene82082:CDS 40.0%
! CTGCCTGATGATTTGTCAAT+TGG - chr7.3:58453028-58453047 MS.gene82082:CDS 40.0%
!!! ATTGTTTTGACCATGAGCCT+AGG - chr7.3:58453763-58453782 MS.gene82082:intron 40.0%
!!! TTGTTTTGACCATGAGCCTA+GGG - chr7.3:58453764-58453783 MS.gene82082:intron 40.0%
AAGCAGGGACTCTGTATACA+CGG + chr7.3:58454153-58454172 None:intergenic 45.0%
CTCTGTATACACGGTCACTT+TGG + chr7.3:58454144-58454163 None:intergenic 45.0%
GGCTCATGGTCAAAACAATC+TGG + chr7.3:58453762-58453781 None:intergenic 45.0%
GGTGACATCATTAGTACGGA+TGG - chr7.3:58453969-58453988 MS.gene82082:intron 45.0%
GTCGTTCAAGCTACTACCTT+TGG - chr7.3:58453361-58453380 MS.gene82082:CDS 45.0%
!! TACCTTTGGAATCCATCCAC+CGG - chr7.3:58453375-58453394 MS.gene82082:CDS 45.0%
AACACCGGAGAGTGAAAGCA+GGG + chr7.3:58454168-58454187 None:intergenic 50.0%
ATTAGTACGGATGGCCGAAC+TGG - chr7.3:58453978-58453997 MS.gene82082:intron 50.0%
GATTGGGGCTTGTGGGTATT+TGG - chr7.3:58453786-58453805 MS.gene82082:intron 50.0%
TAACACCGGAGAGTGAAAGC+AGG + chr7.3:58454169-58454188 None:intergenic 50.0%
TGACCATGAGCCTAGGGATT+GGG - chr7.3:58453770-58453789 MS.gene82082:intron 50.0%
TGGAATCTTGCAGAGGTTGC+CGG - chr7.3:58453048-58453067 MS.gene82082:CDS 50.0%
TGTTTGTGAACTCCGGTGGA+TGG + chr7.3:58453390-58453409 None:intergenic 50.0%
TTGACCATGAGCCTAGGGAT+TGG - chr7.3:58453769-58453788 MS.gene82082:intron 50.0%
! TCTACGTGTGTGTTTTGCGG+CGG + chr7.3:58453167-58453186 None:intergenic 50.0%
GACCATGAGCCTAGGGATTG+GGG - chr7.3:58453771-58453790 MS.gene82082:intron 55.0%
GAGTCCCTGCTTTCACTCTC+CGG - chr7.3:58454161-58454180 MS.gene82082:CDS 55.0%
! CTCCGGTGGATGGATTCCAA+AGG + chr7.3:58453380-58453399 None:intergenic 55.0%
ACCCACAAGCCCCAATCCCT+AGG + chr7.3:58453783-58453802 None:intergenic 60.0%
AGCCCCAATCCCTAGGCTCA+TGG + chr7.3:58453776-58453795 None:intergenic 60.0%
AGCCTAGGGATTGGGGCTTG+TGG - chr7.3:58453778-58453797 MS.gene82082:intron 60.0%
GCCTAGGGATTGGGGCTTGT+GGG - chr7.3:58453779-58453798 MS.gene82082:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 58452995 58454202 58452995 ID=MS.gene82082
chr7.3 mRNA 58452995 58454202 58452995 ID=MS.gene82082.t1;Parent=MS.gene82082
chr7.3 exon 58454128 58454202 58454128 ID=MS.gene82082.t1.exon1;Parent=MS.gene82082.t1
chr7.3 CDS 58454128 58454202 58454128 ID=cds.MS.gene82082.t1;Parent=MS.gene82082.t1
chr7.3 exon 58452995 58453711 58452995 ID=MS.gene82082.t1.exon2;Parent=MS.gene82082.t1
chr7.3 CDS 58452995 58453711 58452995 ID=cds.MS.gene82082.t1;Parent=MS.gene82082.t1
Gene Sequence

>MS.gene82082

ATGGAGAAGAAGAAGAAGAAGACATTGTATCTGCTGCCTGATGATTTGTCAATTGGAATCTTGCAGAGGTTGCCGGTAAAGTATCTTATACGTTTCAAATGCATTCGTAAGTCTTGGTTTTCTCTGATCTCTCATGATATTAATTTTGCAAATTCACATTTTCAACATACCGCCGCAAAACACACACGTAGAGTTATGTTCTTGTCAGATTCTAATCCAGAAACACTATCGTTAGATTTTGATTTTGAAACATCATCATTTGGCTATGAAACTGTTACTGAAATACCTAGTCTAGTTTTATGAAACCCCAATCTGATTATTTCAATCAAATTGTTAGTTCGTGTAGAGGCTTCATATTTTCTCATCGTCGTTCAAGCTACTACCTTTGGAATCCATCCACCGGAGTTCACAAACAAATACCTTTGTCTCCTCTTGATTCCAATTTAGATGCCAAATATTCCTGTTTTCCATATGGTTTTTGGTATGACCAGTCAACTGATGATTACTTGGTGGTTTCGGTGTACAGTGATACATCCTTAGCCTTAGGTATTATGTTTTCACGTTTGAAGTTTTTCACGTTGAGAAGTAATACTTGGAAAGAACTTGAGGCTACTCGCACTACTTATATGATTGTCACTAATCAGCTCAAAGTAGGTCTGTTCTTTAATGGGTCTATTCATTGGTTGGCTCGTCGTCCTGATCTATTTATGGATGTTGTTATTGCATTTGATTTAATGGAATGGAAACTTTTTGATATGCCTTTTCCAGATTGTTTTGACCATGAGCCTAGGGATTGGGGCTTGTGGGTATTTGGAGAATCTCTCAGTCTATTTGCTAAGGATTATGTTCGTTGTAGAGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCATATTGGACTTTGCATCTTGTTCTTCCTATTGATGGCATTTCCACTATATTCTTTTCCCCAATATGCTCTACAAAAAGTGGTGACATCATTAGTACGGATGGCCGAACTGGATTGTTGAAGTATAATGACAAAAAACAACTTATAGAACATTACACCTTTTGTGATGGTCGACTTCAAATTAGAAAGTATAATGACAATGAACAACTTATAAAACATTACTACTATTGTGATGGTTCACTTCCAATTAGATCCAAAGTGACCGTGTATACAGAGTCCCTGCTTTCACTCTCCGGTGTTAATGTGCAAGTATAA
Protein sequence

>MS.gene82082.t1

MEKKKKKTLYLLPDDLSIGILQRLPSTDDYLVVSVYSDTSLALGIMFSRLKFFTLRSNTWKELEATRTTYMIVTNQLKVGLFFNGSIHWLARRPDLFMDVVIAFDLMEWKLFDMPFPDCFDHEPRDWGLWVFGESLSLFAKDYVRCRVEIWVMKEYKVHSYWTLHLVLPIDGISTIFFSPICSTKSGDIISTDGRTGLLKYNDKKQLIEHYTFCDGRLQIRKYNDNEQLIKHYYYCDGSLPIRSKVTVYTESLLSLSGVNVQV