AlfalfaGEDB | MS.gene064109

M. sativa cultivar XinJiangDaYe / MS.gene064109

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064109.t1	XP_003605032.1	72.7	183	42	4	2	183	178	353	3.40E-67	264.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064109.t1	G7JVS7	72.7	183	42	4	2	183	178	353	2.4e-67	264.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene064109	MS.gene035237	PPI
MS.gene034686	MS.gene064109	PPI
MS.gene40982	MS.gene064109	PPI
MS.gene070461	MS.gene064109	PPI
MS.gene003076	MS.gene064109	PPI
MS.gene064109	MS.gene38220	PPI
MS.gene87557	MS.gene064109	PPI
MS.gene69307	MS.gene064109	PPI
MS.gene030114	MS.gene064109	PPI
MS.gene064109	MS.gene03060	PPI
MS.gene036662	MS.gene064109	PPI
MS.gene036663	MS.gene064109	PPI
MS.gene87563	MS.gene064109	PPI
MS.gene24212	MS.gene064109	PPI
MS.gene064109	MS.gene058696	PPI
MS.gene064109	MS.gene009893	PPI
MS.gene051820	MS.gene064109	PPI
MS.gene035235	MS.gene064109	PPI
MS.gene40988	MS.gene064109	PPI
MS.gene81242	MS.gene064109	PPI
MS.gene26101	MS.gene064109	PPI
MS.gene27283	MS.gene064109	PPI
MS.gene64203	MS.gene064109	PPI
MS.gene045140	MS.gene064109	PPI
MS.gene024004	MS.gene064109	PPI
MS.gene42444	MS.gene064109	PPI
MS.gene51202	MS.gene064109	PPI
MS.gene059101	MS.gene064109	PPI
MS.gene87562	MS.gene064109	PPI
MS.gene066623	MS.gene064109	PPI
MS.gene064109	MS.gene041391	PPI
MS.gene024420	MS.gene064109	PPI
MS.gene064104	MS.gene064109	PPI
MS.gene40878	MS.gene064109	PPI
MS.gene041491	MS.gene064109	PPI
MS.gene51201	MS.gene064109	PPI
MS.gene064109	MS.gene030114	PPI
MS.gene88416	MS.gene064109	PPI
MS.gene033443	MS.gene064109	PPI
MS.gene50337	MS.gene064109	PPI
MS.gene43789	MS.gene064109	PPI
MS.gene059096	MS.gene064109	PPI
MS.gene57528	MS.gene064109	PPI
MS.gene064109	MS.gene036558	PPI
MS.gene064109	MS.gene87554	PPI
MS.gene006711	MS.gene064109	PPI
MS.gene50332	MS.gene064109	PPI
MS.gene27285	MS.gene064109	PPI
MS.gene072177	MS.gene064109	PPI
MS.gene064109	MS.gene40984	PPI
MS.gene064091	MS.gene064109	PPI
MS.gene064109	MS.gene048193	PPI
MS.gene064112	MS.gene064109	PPI
MS.gene045476	MS.gene064109	PPI
MS.gene24208	MS.gene064109	PPI
MS.gene064109	MS.gene016220	PPI
MS.gene061241	MS.gene064109	PPI
MS.gene50307	MS.gene064109	PPI
MS.gene24213	MS.gene064109	PPI
MS.gene43796	MS.gene064109	PPI
MS.gene044429	MS.gene064109	PPI
MS.gene85454	MS.gene064109	PPI
MS.gene58312	MS.gene064109	PPI
MS.gene43790	MS.gene064109	PPI
MS.gene51191	MS.gene064109	PPI
MS.gene064109	MS.gene58240	PPI
MS.gene064109	MS.gene27284	PPI
MS.gene064109	MS.gene034680	PPI
MS.gene44887	MS.gene064109	PPI
MS.gene85043	MS.gene064109	PPI
MS.gene033430	MS.gene064109	PPI
MS.gene034677	MS.gene064109	PPI
MS.gene036583	MS.gene064109	PPI
MS.gene88780	MS.gene064109	PPI
MS.gene055694	MS.gene064109	PPI
MS.gene064109	MS.gene51190	PPI
MS.gene58314	MS.gene064109	PPI
MS.gene064109	MS.gene58319	PPI
MS.gene71159	MS.gene064109	PPI
MS.gene96448	MS.gene064109	PPI
MS.gene064109	MS.gene57532	PPI
MS.gene77858	MS.gene064109	PPI
MS.gene041392	MS.gene064109	PPI
MS.gene064109	MS.gene033442	PPI
MS.gene033083	MS.gene064109	PPI
MS.gene63658	MS.gene064109	PPI
MS.gene033081	MS.gene064109	PPI
MS.gene031591	MS.gene064109	PPI
MS.gene035263	MS.gene064109	PPI
MS.gene064109	MS.gene058669	PPI
MS.gene035262	MS.gene064109	PPI
MS.gene51199	MS.gene064109	PPI
MS.gene064108	MS.gene064109	PPI
MS.gene064109	MS.gene041489	PPI
MS.gene58315	MS.gene064109	PPI
MS.gene57536	MS.gene064109	PPI
MS.gene019503	MS.gene064109	PPI
MS.gene064109	MS.gene024000	PPI
MS.gene87559	MS.gene064109	PPI
MS.gene041473	MS.gene064109	PPI
MS.gene50336	MS.gene064109	PPI
MS.gene033431	MS.gene064109	PPI
MS.gene064109	MS.gene035238	PPI
MS.gene041475	MS.gene064109	PPI
MS.gene31587	MS.gene064109	PPI
MS.gene064109	MS.gene064114	PPI
MS.gene033441	MS.gene064109	PPI
MS.gene063474	MS.gene064109	PPI
MS.gene064109	MS.gene87584	PPI
MS.gene048193	MS.gene064109	PPI
MS.gene063826	MS.gene064109	PPI
MS.gene064109	MS.gene80610	PPI
MS.gene060367	MS.gene064109	PPI
MS.gene44892	MS.gene064109	PPI
MS.gene036664	MS.gene064109	PPI
MS.gene58239	MS.gene064109	PPI
MS.gene024011	MS.gene064109	PPI
MS.gene000038	MS.gene064109	PPI
MS.gene57531	MS.gene064109	PPI
MS.gene064111	MS.gene064109	PPI
MS.gene87584	MS.gene064109	PPI
MS.gene67501	MS.gene064109	PPI
MS.gene26829	MS.gene064109	PPI
MS.gene39262	MS.gene064109	PPI
MS.gene58241	MS.gene064109	PPI
MS.gene064109	MS.gene27319	PPI
MS.gene053256	MS.gene064109	PPI
MS.gene025887	MS.gene064109	PPI
MS.gene019507	MS.gene064109	PPI
MS.gene045474	MS.gene064109	PPI
MS.gene75875	MS.gene064109	PPI
MS.gene041470	MS.gene064109	PPI
MS.gene058694	MS.gene064109	PPI
MS.gene064090	MS.gene064109	PPI
MS.gene54049	MS.gene064109	PPI
MS.gene015089	MS.gene064109	PPI
MS.gene006710	MS.gene064109	PPI
MS.gene064109	MS.gene064083	PPI
MS.gene58722	MS.gene064109	PPI
MS.gene011679	MS.gene064109	PPI
MS.gene064109	MS.gene024420	PPI
MS.gene033079	MS.gene064109	PPI
MS.gene064109	MS.gene024008	PPI
MS.gene64001	MS.gene064109	PPI
MS.gene57533	MS.gene064109	PPI
MS.gene064109	MS.gene54541	PPI
MS.gene36704	MS.gene064109	PPI
MS.gene032970	MS.gene064109	PPI
MS.gene064109	MS.gene053299	PPI
MS.gene064109	MS.gene28758	PPI
MS.gene77856	MS.gene064109	PPI
MS.gene24826	MS.gene064109	PPI
MS.gene036556	MS.gene064109	PPI
MS.gene58313	MS.gene064109	PPI
MS.gene066622	MS.gene064109	PPI
MS.gene064109	MS.gene69307	PPI
MS.gene39265	MS.gene064109	PPI
MS.gene51188	MS.gene064109	PPI
MS.gene63655	MS.gene064109	PPI
MS.gene44883	MS.gene064109	PPI
MS.gene41046	MS.gene064109	PPI
MS.gene063472	MS.gene064109	PPI
MS.gene87588	MS.gene064109	PPI
MS.gene017412	MS.gene064109	PPI
MS.gene80884	MS.gene064109	PPI
MS.gene51192	MS.gene064109	PPI
MS.gene87585	MS.gene064109	PPI
MS.gene009883	MS.gene064109	PPI
MS.gene064109	MS.gene96406	PPI
MS.gene041395	MS.gene064109	PPI
MS.gene58317	MS.gene064109	PPI
MS.gene40886	MS.gene064109	PPI
MS.gene044563	MS.gene064109	PPI
MS.gene069075	MS.gene064109	PPI
MS.gene033427	MS.gene064109	PPI
MS.gene03060	MS.gene064109	PPI
MS.gene40985	MS.gene064109	PPI
MS.gene041474	MS.gene064109	PPI
MS.gene064109	MS.gene44428	PPI
MS.gene77704	MS.gene064109	PPI
MS.gene27020	MS.gene064109	PPI
MS.gene066620	MS.gene064109	PPI
MS.gene58321	MS.gene064109	PPI
MS.gene064109	MS.gene058703	PPI
MS.gene86273	MS.gene064109	PPI
MS.gene041388	MS.gene064109	PPI
MS.gene062698	MS.gene064109	PPI
MS.gene96126	MS.gene064109	PPI
MS.gene51208	MS.gene064109	PPI
MS.gene016524	MS.gene064109	PPI
MS.gene50304	MS.gene064109	PPI
MS.gene045475	MS.gene064109	PPI
MS.gene88776	MS.gene064109	PPI
MS.gene59943	MS.gene064109	PPI
MS.gene90744	MS.gene064109	PPI
MS.gene51204	MS.gene064109	PPI
MS.gene58783	MS.gene064109	PPI
MS.gene064109	MS.gene22715	PPI
MS.gene064109	MS.gene58316	PPI
MS.gene036557	MS.gene064109	PPI
MS.gene041393	MS.gene064109	PPI
MS.gene50329	MS.gene064109	PPI
MS.gene064109	MS.gene36595	PPI
MS.gene57537	MS.gene064109	PPI
MS.gene42447	MS.gene064109	PPI
MS.gene059156	MS.gene064109	PPI
MS.gene84698	MS.gene064109	PPI
MS.gene064109	MS.gene061240	PPI
MS.gene009891	MS.gene064109	PPI
MS.gene066641	MS.gene064109	PPI
MS.gene82082	MS.gene064109	PPI
MS.gene064109	MS.gene50311	PPI
MS.gene064109	MS.gene058989	PPI
MS.gene90742	MS.gene064109	PPI
MS.gene064109	MS.gene57538	PPI
MS.gene064109	MS.gene041468	PPI
MS.gene57535	MS.gene064109	PPI
MS.gene012215	MS.gene064109	PPI
MS.gene064109	MS.gene42447	PPI
MS.gene87200	MS.gene064109	PPI
MS.gene058701	MS.gene064109	PPI
MS.gene58319	MS.gene064109	PPI
MS.gene058669	MS.gene064109	PPI
MS.gene26830	MS.gene064109	PPI
MS.gene90743	MS.gene064109	PPI
MS.gene064109	MS.gene044425	PPI
MS.gene44885	MS.gene064109	PPI
MS.gene060370	MS.gene064109	PPI
MS.gene50327	MS.gene064109	PPI
MS.gene066635	MS.gene064109	PPI
MS.gene064109	MS.gene24173	PPI
MS.gene010758	MS.gene064109	PPI
MS.gene96406	MS.gene064109	PPI
MS.gene064109	MS.gene27022	PPI
MS.gene87586	MS.gene064109	PPI
MS.gene57532	MS.gene064109	PPI
MS.gene68890	MS.gene064109	PPI
MS.gene51200	MS.gene064109	PPI
MS.gene40887	MS.gene064109	PPI
MS.gene064109	MS.gene023999	PPI
MS.gene50339	MS.gene064109	PPI
MS.gene046958	MS.gene064109	PPI
MS.gene034688	MS.gene064109	PPI
MS.gene060366	MS.gene064109	PPI
MS.gene047279	MS.gene064109	PPI
MS.gene88774	MS.gene064109	PPI
MS.gene064109	MS.gene036581	PPI
MS.gene48221	MS.gene064109	PPI
MS.gene42452	MS.gene064109	PPI
MS.gene57529	MS.gene064109	PPI
MS.gene064109	MS.gene000036	PPI
MS.gene40986	MS.gene064109	PPI
MS.gene063414	MS.gene064109	PPI
MS.gene064109	MS.gene50320	PPI
MS.gene064109	MS.gene58314	PPI
MS.gene064109	MS.gene87557	PPI
MS.gene064109	MS.gene035263	PPI
MS.gene009892	MS.gene064109	PPI
MS.gene40902	MS.gene064109	PPI
MS.gene064109	MS.gene053257	PPI
MS.gene57526	MS.gene064109	PPI
MS.gene064109	MS.gene51201	PPI
MS.gene27051	MS.gene064109	PPI
MS.gene021553	MS.gene064109	PPI
MS.gene26957	MS.gene064109	PPI
MS.gene060368	MS.gene064109	PPI
MS.gene033875	MS.gene064109	PPI
MS.gene97996	MS.gene064109	PPI
MS.gene036582	MS.gene064109	PPI
MS.gene27021	MS.gene064109	PPI
MS.gene035236	MS.gene064109	PPI
MS.gene58320	MS.gene064109	PPI
MS.gene066120	MS.gene064109	PPI
MS.gene053299	MS.gene064109	PPI
MS.gene041394	MS.gene064109	PPI
MS.gene059157	MS.gene064109	PPI
MS.gene064109	MS.gene047279	PPI
MS.gene064109	MS.gene50305	PPI
MS.gene58781	MS.gene064109	PPI
MS.gene57717	MS.gene064109	PPI
MS.gene57525	MS.gene064109	PPI
MS.gene028390	MS.gene064109	PPI
MS.gene011106	MS.gene064109	PPI
MS.gene033440	MS.gene064109	PPI
MS.gene064109	MS.gene032969	PPI
MS.gene62398	MS.gene064109	PPI
MS.gene60027	MS.gene064109	PPI
MS.gene44886	MS.gene064109	PPI
MS.gene038756	MS.gene064109	PPI
MS.gene40904	MS.gene064109	PPI
MS.gene064109	MS.gene42445	PPI
MS.gene35068	MS.gene064109	PPI
MS.gene064109	MS.gene036663	PPI
MS.gene041390	MS.gene064109	PPI
MS.gene24286	MS.gene064109	PPI
MS.gene058693	MS.gene064109	PPI
MS.gene92376	MS.gene064109	PPI
MS.gene000035	MS.gene064109	PPI
MS.gene070462	MS.gene064109	PPI
MS.gene87569	MS.gene064109	PPI
MS.gene064109	MS.gene63657	PPI
MS.gene31637	MS.gene064109	PPI
MS.gene87573	MS.gene064109	PPI
MS.gene064109	MS.gene023996	PPI
MS.gene019504	MS.gene064109	PPI
MS.gene064109	MS.gene045473	PPI
MS.gene034762	MS.gene064109	PPI
MS.gene064114	MS.gene064109	PPI
MS.gene51207	MS.gene064109	PPI
MS.gene064109	MS.gene50301	PPI
MS.gene50297	MS.gene064109	PPI
MS.gene58716	MS.gene064109	PPI
MS.gene68580	MS.gene064109	PPI
MS.gene033444	MS.gene064109	PPI
MS.gene019505	MS.gene064109	PPI
MS.gene053257	MS.gene064109	PPI
MS.gene50306	MS.gene064109	PPI
MS.gene064109	MS.gene035234	PPI
MS.gene58785	MS.gene064109	PPI
MS.gene58316	MS.gene064109	PPI
MS.gene034690	MS.gene064109	PPI
MS.gene87564	MS.gene064109	PPI
MS.gene066639	MS.gene064109	PPI
MS.gene26949	MS.gene064109	PPI
MS.gene51189	MS.gene064109	PPI
MS.gene044426	MS.gene064109	PPI
MS.gene96407	MS.gene064109	PPI
MS.gene036558	MS.gene064109	PPI
MS.gene50309	MS.gene064109	PPI
MS.gene036760	MS.gene064109	PPI
MS.gene064109	MS.gene024979	PPI
MS.gene77857	MS.gene064109	PPI
MS.gene58311	MS.gene064109	PPI
MS.gene57527	MS.gene064109	PPI
MS.gene59637	MS.gene064109	PPI
MS.gene033432	MS.gene064109	PPI
MS.gene033426	MS.gene064109	PPI
MS.gene064109	MS.gene43790	PPI
MS.gene035237	MS.gene064109	PPI
MS.gene064086	MS.gene064109	PPI
MS.gene59639	MS.gene064109	PPI
MS.gene034681	MS.gene064109	PPI
MS.gene50298	MS.gene064109	PPI
MS.gene031590	MS.gene064109	PPI
MS.gene036584	MS.gene064109	PPI
MS.gene67687	MS.gene064109	PPI
MS.gene035261	MS.gene064109	PPI
MS.gene064109	MS.gene59637	PPI
MS.gene063670	MS.gene064109	PPI
MS.gene57530	MS.gene064109	PPI
MS.gene066626	MS.gene064109	PPI
MS.gene019506	MS.gene064109	PPI
MS.gene50326	MS.gene064109	PPI
MS.gene064109	MS.gene003076	PPI
MS.gene058692	MS.gene064109	PPI
MS.gene42451	MS.gene064109	PPI
MS.gene064109	MS.gene024009	PPI
MS.gene54541	MS.gene064109	PPI
MS.gene064109	MS.gene036599	PPI
MS.gene69309	MS.gene064109	PPI
MS.gene024002	MS.gene064109	PPI
MS.gene036581	MS.gene064109	PPI
MS.gene064109	MS.gene006705	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064109.t1	MTR_4g023080	72.678	183	42	4	2	183	178	353	2.29e-86	258
MS.gene064109.t1	MTR_4g023130	70.492	183	46	4	2	183	137	312	2.02e-83	249
MS.gene064109.t1	MTR_4g023070	62.564	195	56	2	2	184	181	370	3.59e-80	243
MS.gene064109.t1	MTR_4g021785	68.108	185	50	4	1	183	177	354	7.01e-79	239
MS.gene064109.t1	MTR_4g023090	61.026	195	58	2	2	183	194	383	1.11e-77	237
MS.gene064109.t1	MTR_4g023120	60.309	194	60	2	2	183	181	369	1.74e-75	231
MS.gene064109.t1	MTR_4g023380	60.488	205	53	3	2	183	179	378	1.85e-75	231
MS.gene064109.t1	MTR_3g103020	57.527	186	71	4	2	183	196	377	2.80e-63	200
MS.gene064109.t1	MTR_4g116320	59.563	183	67	5	1	181	78	255	1.21e-62	194
MS.gene064109.t1	MTR_4g109280	52.717	184	80	5	2	183	180	358	1.73e-59	189
MS.gene064109.t1	MTR_6g060650	54.098	183	77	4	2	183	196	372	1.50e-58	187
MS.gene064109.t1	MTR_4g117720	56.757	185	72	6	2	181	194	375	2.50e-58	187
MS.gene064109.t1	MTR_4g023200	55.435	184	74	4	2	182	180	358	4.34e-58	186
MS.gene064109.t1	MTR_4g116330	55.249	181	78	3	2	181	199	377	1.20e-57	185
MS.gene064109.t1	MTR_4g109270	54.595	185	77	4	2	183	183	363	1.26e-57	185
MS.gene064109.t1	MTR_4g023190	55.978	184	72	5	2	182	180	357	4.17e-56	181
MS.gene064109.t1	MTR_8g040935	51.872	187	84	4	1	183	23	207	1.70e-55	174
MS.gene064109.t1	MTR_4g094365	55.376	186	73	6	2	183	184	363	2.55e-55	179
MS.gene064109.t1	MTR_4g023150	54.348	184	76	4	2	182	180	358	2.06e-54	176
MS.gene064109.t1	MTR_6g463430	54.098	183	74	3	2	182	26	200	9.09e-54	170
MS.gene064109.t1	MTR_8g433030	54.098	183	71	7	2	179	163	337	4.19e-52	170
MS.gene064109.t1	MTR_8g032390	54.098	183	71	7	2	179	196	370	9.94e-52	170
MS.gene064109.t1	MTR_3g034180	53.684	190	73	6	2	183	306	488	2.15e-51	172
MS.gene064109.t1	MTR_4g117850	51.075	186	82	5	1	181	195	376	5.68e-51	168
MS.gene064109.t1	MTR_4g023440	51.099	182	46	2	2	183	193	331	1.19e-49	163
MS.gene064109.t1	MTR_3g034130	52.778	180	72	5	2	171	192	368	2.03e-49	164
MS.gene064109.t1	MTR_5g070130	47.568	185	85	3	2	177	188	369	7.71e-49	162
MS.gene064109.t1	MTR_4g117780	51.613	186	83	3	2	183	184	366	1.16e-48	162
MS.gene064109.t1	MTR_3g034160	53.191	188	73	5	2	181	192	372	4.64e-48	160
MS.gene064109.t1	MTR_4g122850	53.439	189	74	10	2	183	182	363	2.86e-46	156
MS.gene064109.t1	MTR_4g117770	51.075	186	84	3	2	183	184	366	5.64e-46	155
MS.gene064109.t1	MTR_4g117810	51.075	186	84	3	2	183	184	366	5.64e-46	155
MS.gene064109.t1	MTR_1g055195	54.839	155	62	4	24	177	324	471	1.00e-45	157
MS.gene064109.t1	MTR_4g118380	52.201	159	63	4	2	150	198	353	4.45e-44	149
MS.gene064109.t1	MTR_5g097210	49.206	189	75	8	1	180	183	359	4.80e-44	150
MS.gene064109.t1	MTR_8g433040	48.925	186	74	5	2	183	195	363	6.01e-44	149
MS.gene064109.t1	MTR_8g032380	48.925	186	74	5	2	183	195	363	6.01e-44	149
MS.gene064109.t1	MTR_5g070088	50.633	158	75	1	25	182	229	383	7.06e-44	150
MS.gene064109.t1	MTR_1g055175	46.277	188	87	8	2	182	19	199	7.55e-42	139
MS.gene064109.t1	MTR_5g070080	48.619	181	84	6	2	179	206	380	2.65e-41	143
MS.gene064109.t1	MTR_4g118400	46.927	179	74	5	1	177	134	293	3.51e-41	140
MS.gene064109.t1	MTR_1g055165	48.235	170	80	6	15	183	155	317	4.77e-40	138
MS.gene064109.t1	MTR_1g055250	42.623	183	93	7	1	177	87	263	1.15e-38	135
MS.gene064109.t1	MTR_4g117870	46.369	179	57	5	2	180	124	263	2.80e-37	130
MS.gene064109.t1	MTR_1g055135	47.239	163	78	5	24	183	217	374	3.42e-37	132
MS.gene064109.t1	MTR_4g117530	42.077	183	68	4	2	183	107	252	3.47e-37	129
MS.gene064109.t1	MTR_4g023430	71.250	80	23	0	104	183	142	221	4.00e-35	123
MS.gene064109.t1	MTR_4g116330	42.541	181	62	3	2	181	199	338	4.84e-35	125
MS.gene064109.t1	MTR_5g023000	61.386	101	36	1	83	183	1	98	2.17e-33	114
MS.gene064109.t1	MTR_7g079400	42.784	194	91	9	2	183	151	336	1.52e-32	119
MS.gene064109.t1	MTR_4g117750	50.370	135	57	2	55	182	350	481	3.77e-32	120
MS.gene064109.t1	MTR_4g117750	44.271	192	87	7	1	180	172	355	3.94e-30	115
MS.gene064109.t1	MTR_4g118370	40.323	186	81	6	1	181	97	257	1.24e-31	115
MS.gene064109.t1	MTR_7g079370	40.437	183	94	6	2	177	175	349	2.15e-31	116
MS.gene064109.t1	MTR_4g121580	45.614	171	57	7	1	165	195	335	1.94e-30	114
MS.gene064109.t1	MTR_4g118360	55.856	111	44	3	71	181	18	123	2.44e-30	107
MS.gene064109.t1	MTR_8g102520	39.181	171	90	6	20	183	158	321	2.07e-27	105
MS.gene064109.t1	MTR_4g122860	40.426	188	76	9	2	183	162	319	1.28e-24	98.2
MS.gene064109.t1	MTR_7g079450	42.466	146	73	5	39	183	1	136	1.69e-23	90.9
MS.gene064109.t1	MTR_7g079420	41.818	165	76	9	21	177	985	1137	2.02e-23	97.1
MS.gene064109.t1	MTR_8g098830	39.610	154	78	6	24	175	72	212	2.98e-23	92.4
MS.gene064109.t1	MTR_7g117720	61.628	86	30	3	94	177	186	270	6.65e-22	90.1
MS.gene064109.t1	MTR_4g023100	72.881	59	11	1	125	183	65	118	2.23e-21	84.7
MS.gene064109.t1	MTR_4g114700	34.807	181	66	3	1	178	90	221	5.21e-21	87.0
MS.gene064109.t1	MTR_2g048580	37.297	185	90	11	2	177	168	335	3.54e-20	86.3
MS.gene064109.t1	MTR_4g117430	53.659	82	37	1	2	83	75	155	5.14e-20	82.4
MS.gene064109.t1	MTR_8g013010	53.659	82	28	4	2	80	235	309	5.65e-16	74.3
MS.gene064109.t1	MTR_4g122840	38.849	139	45	5	46	183	164	263	7.62e-12	62.4
MS.gene064109.t1	MTR_8g013005	56.667	60	21	2	125	183	3	58	1.48e-11	57.4
MS.gene064109.t1	MTR_1g055145	47.727	88	39	5	11	97	121	202	1.57e-11	61.6
MS.gene064109.t1	MTR_4g109290	60.000	55	19	2	129	183	136	187	5.58e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene064109.t1	AT3G06240	31.056	161	97	6	21	176	268	419	9.84e-12	62.8

Find 41 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTGTTGCCTTTGATTTAA+TGG	0.113056	4.3:-75365978	MS.gene064109:CDS
TTTGATGGTTTGTGGGTATT+TGG	0.242237	4.3:-75365899	MS.gene064109:CDS
TTGGAGAATTTCTAAGTCTA+TGG	0.259076	4.3:-75365880	MS.gene064109:CDS
AAGAAAGCATTTCTATTTGA+TGG	0.290942	4.3:-75365914	MS.gene064109:CDS
ATGATAAAGGACAACTATTA+TGG	0.306500	4.3:-75365670	MS.gene064109:CDS
CCTTTAGTGGGGCTGTTCAT+TGG	0.312684	4.3:-75366033	MS.gene064109:CDS
TTAATGATACAACTGTAATA+TGG	0.316712	4.3:-75365844	MS.gene064109:CDS
TGTAAGAGTCCATATGAAAT+TGG	0.319752	4.3:-75365635	MS.gene064109:CDS
GCTTTCTTGTCAAAATCATT+TGG	0.335595	4.3:+75365929	None:intergenic
GATATTATTGGAAGAAATCT+TGG	0.373623	4.3:-75365713	MS.gene064109:CDS
CATTTCTATTTGATGGTTTG+TGG	0.390994	4.3:-75365907	MS.gene064109:CDS
GAGTCTCTGCTTTCACTCCT+TGG	0.393410	4.3:-75365587	MS.gene064109:CDS
TTGTCAAAATCATTTGGAAC+TGG	0.400066	4.3:+75365935	None:intergenic
GAGAAGGGGTTCCCTTTAGT+GGG	0.408337	4.3:-75366045	MS.gene064109:CDS
GGAGAAGGGGTTCCCTTTAG+TGG	0.409358	4.3:-75366046	MS.gene064109:CDS
ATAGGTTGAAAGAAGTGATT+AGG	0.414422	4.3:+75365755	None:intergenic
AAGAAATCTTGGTACTAGAT+TGG	0.428204	4.3:-75365702	MS.gene064109:CDS
ATTTCTATTTGATGGTTTGT+GGG	0.428632	4.3:-75365906	MS.gene064109:CDS
GTATACATGCCAATTTCATA+TGG	0.442449	4.3:+75365626	None:intergenic
CAATGAACAGCCCCACTAAA+GGG	0.448820	4.3:+75366034	None:intergenic
TAGTGGGGCTGTTCATTGGT+TGG	0.462169	4.3:-75366029	MS.gene064109:CDS
TAATATGTGGAAAGAAATAG+AGG	0.468516	4.3:-75366104	None:intergenic
TTTCCTTTCCATTAAATCAA+AGG	0.474723	4.3:+75365970	None:intergenic
CCAATGAACAGCCCCACTAA+AGG	0.489470	4.3:+75366033	None:intergenic
TGGAGAATTTCTAAGTCTAT+GGG	0.490268	4.3:-75365879	MS.gene064109:CDS
TTGGTGAAGTATAATGATAA+AGG	0.492510	4.3:-75365683	MS.gene064109:CDS
ATTTCTAAGTCTATGGGCTA+TGG	0.507502	4.3:-75365873	MS.gene064109:CDS
TAATGATACAACTGTAATAT+GGG	0.523695	4.3:-75365843	MS.gene064109:CDS
TATATTGACGTATACAAAGA+TGG	0.527306	4.3:-75366067	MS.gene064109:CDS
TGACATCTAAACGTAAATCA+TGG	0.533252	4.3:+75365999	None:intergenic
TTGCCTTTGATTTAATGGAA+AGG	0.533360	4.3:-75365973	MS.gene064109:CDS
TTGAAAGAAGTGATTAGGAA+TGG	0.552785	4.3:+75365760	None:intergenic
ACGTATACAAAGATGGAGAA+GGG	0.557646	4.3:-75366060	MS.gene064109:CDS
AATACAAAATGCATTCGTCA+TGG	0.568013	4.3:-75365811	MS.gene064109:CDS
GACGTATACAAAGATGGAGA+AGG	0.580640	4.3:-75366061	MS.gene064109:CDS
TAGGAATGGCATCAACAGAA+AGG	0.581408	4.3:+75365774	None:intergenic
AATGATGCTCATTGTCACCA+AGG	0.601416	4.3:+75365570	None:intergenic
TTCATATGGACTCTTACAGA+AGG	0.605799	4.3:+75365640	None:intergenic
AGAAGGGGTTCCCTTTAGTG+GGG	0.631108	4.3:-75366044	MS.gene064109:CDS
CGTATACAAAGATGGAGAAG+GGG	0.638066	4.3:-75366059	MS.gene064109:CDS
AATATGTGGAAAGAAATAGA+GGG	0.680535	4.3:-75366103	MS.gene064109:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACAAAAAATGGTGATATTAT+TGG	-	chr4.3:75365943-75365962	MS.gene064109:CDS	20.0%
!!	CCTATATATTCTACAAAAAA+TGG	-	chr4.3:75365931-75365950	MS.gene064109:CDS	20.0%
!!	TAATGATACAACTGTAATAT+GGG	-	chr4.3:75365825-75365844	MS.gene064109:CDS	20.0%
!!	TTAATGATACAACTGTAATA+TGG	-	chr4.3:75365824-75365843	MS.gene064109:CDS	20.0%
!!!	CCATTTTTTGTAGAATATAT+AGG	+	chr4.3:75365934-75365953	None:intergenic	20.0%
!	ATGATAAAGGACAACTATTA+TGG	-	chr4.3:75365998-75366017	MS.gene064109:CDS	25.0%
!	GATATTATTGGAAGAAATCT+TGG	-	chr4.3:75365955-75365974	MS.gene064109:CDS	25.0%
!	TATATTGACGTATACAAAGA+TGG	-	chr4.3:75365601-75365620	MS.gene064109:CDS	25.0%
!	TTGGTGAAGTATAATGATAA+AGG	-	chr4.3:75365985-75366004	MS.gene064109:CDS	25.0%
!	TTTCCTTTCCATTAAATCAA+AGG	+	chr4.3:75365701-75365720	None:intergenic	25.0%
!!	ATTTCTATTTGATGGTTTGT+GGG	-	chr4.3:75365762-75365781	MS.gene064109:CDS	25.0%
!!!	AAGAAAGCATTTCTATTTGA+TGG	-	chr4.3:75365754-75365773	MS.gene064109:CDS	25.0%
	AAGAAATCTTGGTACTAGAT+TGG	-	chr4.3:75365966-75365985	MS.gene064109:CDS	30.0%
	AATACAAAATGCATTCGTCA+TGG	-	chr4.3:75365857-75365876	MS.gene064109:CDS	30.0%
	GCTTTCTTGTCAAAATCATT+TGG	+	chr4.3:75365742-75365761	None:intergenic	30.0%
	GTATACATGCCAATTTCATA+TGG	+	chr4.3:75366045-75366064	None:intergenic	30.0%
	TGACATCTAAACGTAAATCA+TGG	+	chr4.3:75365672-75365691	None:intergenic	30.0%
	TGGAGAATTTCTAAGTCTAT+GGG	-	chr4.3:75365789-75365808	MS.gene064109:CDS	30.0%
	TGTAAGAGTCCATATGAAAT+TGG	-	chr4.3:75366033-75366052	MS.gene064109:CDS	30.0%
	TTGAAAGAAGTGATTAGGAA+TGG	+	chr4.3:75365911-75365930	None:intergenic	30.0%
	TTGGAGAATTTCTAAGTCTA+TGG	-	chr4.3:75365788-75365807	MS.gene064109:CDS	30.0%
!	ATAGGTTGAAAGAAGTGATT+AGG	+	chr4.3:75365916-75365935	None:intergenic	30.0%
!	CATTGTTGCCTTTGATTTAA+TGG	-	chr4.3:75365690-75365709	MS.gene064109:CDS	30.0%
!	CATTTCTATTTGATGGTTTG+TGG	-	chr4.3:75365761-75365780	MS.gene064109:CDS	30.0%
!	TTGCCTTTGATTTAATGGAA+AGG	-	chr4.3:75365695-75365714	MS.gene064109:CDS	30.0%
!	TTGTCAAAATCATTTGGAAC+TGG	+	chr4.3:75365736-75365755	None:intergenic	30.0%
	ACGTATACAAAGATGGAGAA+GGG	-	chr4.3:75365608-75365627	MS.gene064109:CDS	35.0%
	TTCATATGGACTCTTACAGA+AGG	+	chr4.3:75366031-75366050	None:intergenic	35.0%
!	ATTTCTAAGTCTATGGGCTA+TGG	-	chr4.3:75365795-75365814	MS.gene064109:CDS	35.0%
!	TTTGATGGTTTGTGGGTATT+TGG	-	chr4.3:75365769-75365788	MS.gene064109:CDS	35.0%
	AATGATGCTCATTGTCACCA+AGG	+	chr4.3:75366101-75366120	None:intergenic	40.0%
	CGTATACAAAGATGGAGAAG+GGG	-	chr4.3:75365609-75365628	MS.gene064109:CDS	40.0%
	GACGTATACAAAGATGGAGA+AGG	-	chr4.3:75365607-75365626	MS.gene064109:CDS	40.0%
	TAGGAATGGCATCAACAGAA+AGG	+	chr4.3:75365897-75365916	None:intergenic	40.0%
	CAATGAACAGCCCCACTAAA+GGG	+	chr4.3:75365637-75365656	None:intergenic	45.0%
	AGAAGGGGTTCCCTTTAGTG+GGG	-	chr4.3:75365624-75365643	MS.gene064109:CDS	50.0%
	CCAATGAACAGCCCCACTAA+AGG	+	chr4.3:75365638-75365657	None:intergenic	50.0%
	CCTTTAGTGGGGCTGTTCAT+TGG	-	chr4.3:75365635-75365654	MS.gene064109:CDS	50.0%
	GAGAAGGGGTTCCCTTTAGT+GGG	-	chr4.3:75365623-75365642	MS.gene064109:CDS	50.0%
	GAGTCTCTGCTTTCACTCCT+TGG	-	chr4.3:75366081-75366100	MS.gene064109:CDS	50.0%
	TAGTGGGGCTGTTCATTGGT+TGG	-	chr4.3:75365639-75365658	MS.gene064109:CDS	50.0%
	GGAGAAGGGGTTCCCTTTAG+TGG	-	chr4.3:75365622-75365641	MS.gene064109:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	75365568	75366122	75365568	ID=MS.gene064109
chr4.3	mRNA	75365568	75366122	75365568	ID=MS.gene064109.t1;Parent=MS.gene064109
chr4.3	exon	75365568	75366122	75365568	ID=MS.gene064109.t1.exon1;Parent=MS.gene064109.t1
chr4.3	CDS	75365568	75366122	75365568	ID=cds.MS.gene064109.t1;Parent=MS.gene064109.t1

Gene Sequence

>MS.gene064109

ATGTGGAAAGAAATAGAGGGCACTCACGTCTCTTATATTGACGTATACAAAGATGGAGAAGGGGTTCCCTTTAGTGGGGCTGTTCATTGGTTGGCTTTACGCCATGATTTACGTTTAGATGTCATTGTTGCCTTTGATTTAATGGAAAGGAAATTATTTGAGATGCCAGTTCCAAATGATTTTGACAAGAAAGCATTTCTATTTGATGGTTTGTGGGTATTTGGAGAATTTCTAAGTCTATGGGCTATGGATAATGTTAATGATACAACTGTAATATGGGTGATGAAAGAATACAAAATGCATTCGTCATGGACTAAAACTCTTGTCCTTTCTGTTGATGCCATTCCTAATCACTTCTTTCAACCTATATATTCTACAAAAAATGGTGATATTATTGGAAGAAATCTTGGTACTAGATTGGTGAAGTATAATGATAAAGGACAACTATTATGGCAGCGCTCCTTCTGTAAGAGTCCATATGAAATTGGCATGTATACAGTTGTCATATATACAGAGTCTCTGCTTTCACTCCTTGGTGACAATGAGCATCATTAA

Protein sequence

>MS.gene064109.t1

MWKEIEGTHVSYIDVYKDGEGVPFSGAVHWLALRHDLRLDVIVAFDLMERKLFEMPVPNDFDKKAFLFDGLWVFGEFLSLWAMDNVNDTTVIWVMKEYKMHSSWTKTLVLSVDAIPNHFFQPIYSTKNGDIIGRNLGTRLVKYNDKGQLLWQRSFCKSPYEIGMYTVVIYTESLLSLLGDNEHH