AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060366


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060366.t1 MTR_5g097210 62.674 359 128 3 2 358 3 357 2.34e-152 434
MS.gene060366.t1 MTR_3g103020 57.754 374 142 9 1 366 13 378 4.36e-134 388
MS.gene060366.t1 MTR_1g055135 56.911 369 145 9 7 366 12 375 1.43e-128 374
MS.gene060366.t1 MTR_4g109270 54.762 378 145 8 1 366 1 364 6.64e-127 369
MS.gene060366.t1 MTR_4g117750 57.735 362 135 5 6 358 1 353 1.49e-123 365
MS.gene060366.t1 MTR_4g117750 54.128 109 46 3 258 362 373 481 3.33e-26 109
MS.gene060366.t1 MTR_3g034180 52.493 381 155 10 2 365 117 488 5.51e-122 361
MS.gene060366.t1 MTR_4g117850 54.447 371 145 11 4 363 19 376 1.45e-118 348
MS.gene060366.t1 MTR_3g034160 52.646 378 159 10 2 365 3 374 1.29e-116 343
MS.gene060366.t1 MTR_4g109280 54.692 373 148 12 1 366 1 359 2.39e-116 342
MS.gene060366.t1 MTR_3g034130 51.507 365 159 8 1 350 1 362 6.51e-114 336
MS.gene060366.t1 MTR_5g070080 51.020 392 156 11 2 366 4 386 1.41e-112 333
MS.gene060366.t1 MTR_4g117770 54.068 381 144 13 1 365 1 366 3.65e-108 321
MS.gene060366.t1 MTR_4g117810 54.068 381 144 13 1 365 1 366 3.65e-108 321
MS.gene060366.t1 MTR_5g070130 49.606 381 170 11 1 366 4 377 7.25e-107 319
MS.gene060366.t1 MTR_4g023080 52.011 373 151 12 1 365 1 353 3.19e-106 316
MS.gene060366.t1 MTR_5g070088 49.490 392 164 11 1 365 1 385 4.31e-105 314
MS.gene060366.t1 MTR_6g060650 50.524 382 162 9 1 365 1 372 1.14e-104 313
MS.gene060366.t1 MTR_4g122850 51.105 362 156 12 18 365 11 365 2.65e-104 312
MS.gene060366.t1 MTR_4g023070 49.344 381 160 11 6 365 1 369 1.13e-103 310
MS.gene060366.t1 MTR_4g023090 50.000 388 148 14 7 365 15 385 6.78e-103 308
MS.gene060366.t1 MTR_4g094365 48.267 375 170 11 1 363 1 363 2.68e-102 306
MS.gene060366.t1 MTR_4g021785 50.933 375 155 13 1 366 1 355 4.54e-102 305
MS.gene060366.t1 MTR_1g055195 61.172 273 88 5 94 358 210 472 7.91e-102 309
MS.gene060366.t1 MTR_4g117720 48.819 381 134 10 1 366 44 378 2.06e-100 302
MS.gene060366.t1 MTR_4g023120 48.819 381 162 12 6 365 1 369 1.33e-99 300
MS.gene060366.t1 MTR_4g116330 49.867 377 164 14 2 366 17 380 9.23e-98 295
MS.gene060366.t1 MTR_4g117780 50.670 373 152 13 8 365 11 366 3.56e-97 293
MS.gene060366.t1 MTR_4g023380 46.819 393 146 11 7 365 15 378 3.15e-95 289
MS.gene060366.t1 MTR_4g118380 49.863 365 147 10 1 337 1 357 6.43e-95 287
MS.gene060366.t1 MTR_4g023150 50.262 382 144 15 2 364 4 358 9.80e-95 287
MS.gene060366.t1 MTR_4g023190 50.262 382 143 15 2 364 4 357 1.96e-93 283
MS.gene060366.t1 MTR_8g433040 48.267 375 154 13 5 365 15 363 2.71e-93 283
MS.gene060366.t1 MTR_8g032380 48.267 375 154 13 5 365 15 363 2.71e-93 283
MS.gene060366.t1 MTR_4g023200 49.448 362 137 16 22 364 24 358 2.26e-90 276
MS.gene060366.t1 MTR_4g023130 46.524 374 129 13 1 365 1 312 5.79e-88 268
MS.gene060366.t1 MTR_4g118370 56.067 239 86 3 122 358 33 254 6.78e-84 255
MS.gene060366.t1 MTR_1g055165 45.628 366 137 10 7 366 9 318 4.32e-83 256
MS.gene060366.t1 MTR_4g117870 47.727 308 113 8 64 365 1 266 5.87e-83 253
MS.gene060366.t1 MTR_8g013010 52.920 274 111 7 1 267 47 309 6.00e-83 255
MS.gene060366.t1 MTR_8g032390 45.013 371 149 13 5 358 37 369 1.57e-82 256
MS.gene060366.t1 MTR_4g116330 45.093 377 143 15 2 366 17 341 4.42e-77 241
MS.gene060366.t1 MTR_4g023440 43.562 365 150 12 7 365 17 331 4.80e-76 238
MS.gene060366.t1 MTR_4g121580 44.575 341 145 10 5 331 8 318 3.34e-72 230
MS.gene060366.t1 MTR_8g433030 42.582 364 135 13 5 358 37 336 2.96e-68 218
MS.gene060366.t1 MTR_1g055250 58.794 199 76 4 145 340 49 244 6.11e-68 217
MS.gene060366.t1 MTR_1g055175 58.673 196 75 5 175 366 8 201 1.71e-65 206
MS.gene060366.t1 MTR_7g079400 44.631 298 148 8 77 362 43 335 1.28e-64 209
MS.gene060366.t1 MTR_7g079370 42.229 341 172 10 37 358 16 350 1.57e-64 209
MS.gene060366.t1 MTR_4g118400 39.295 369 138 11 1 358 1 294 6.57e-64 206
MS.gene060366.t1 MTR_2g048580 38.017 363 193 15 1 358 1 336 2.50e-56 187
MS.gene060366.t1 MTR_8g102520 37.846 325 160 11 44 358 24 316 2.49e-52 176
MS.gene060366.t1 MTR_4g116340 45.992 237 94 6 7 233 35 247 3.88e-49 166
MS.gene060366.t1 MTR_4g116320 47.664 214 103 5 150 358 43 252 9.36e-49 165
MS.gene060366.t1 MTR_8g040935 48.325 209 94 8 167 366 5 208 4.34e-46 157
MS.gene060366.t1 MTR_6g463430 48.095 210 89 7 164 365 4 201 5.69e-45 154
MS.gene060366.t1 MTR_4g117530 41.410 227 87 7 142 366 71 253 7.80e-41 144
MS.gene060366.t1 MTR_4g114700 36.822 258 103 6 110 355 9 218 2.66e-39 140
MS.gene060366.t1 MTR_4g117430 47.273 165 65 4 110 267 3 152 4.79e-36 129
MS.gene060366.t1 MTR_7g079420 37.011 281 107 11 109 362 905 1142 6.44e-36 139
MS.gene060366.t1 MTR_4g118360 55.263 114 47 2 255 366 15 126 2.96e-35 125
MS.gene060366.t1 MTR_2g021150 29.759 373 220 18 7 355 13 367 1.72e-33 128
MS.gene060366.t1 MTR_7g117720 43.564 202 77 9 7 197 9 184 7.63e-32 121
MS.gene060366.t1 MTR_7g117720 52.326 86 35 3 279 358 186 271 7.15e-13 68.6
MS.gene060366.t1 MTR_5g069120 44.505 182 79 6 19 184 2 177 2.59e-31 117
MS.gene060366.t1 MTR_4g109290 45.930 172 49 8 1 163 1 137 4.11e-30 114
MS.gene060366.t1 MTR_4g055060 31.494 308 175 12 8 295 30 321 6.24e-30 118
MS.gene060366.t1 MTR_1g054725 28.836 378 216 16 8 355 20 374 6.63e-28 112
MS.gene060366.t1 MTR_5g057790 30.458 371 211 16 8 355 46 392 8.47e-28 112
MS.gene060366.t1 MTR_1g068835 31.494 308 171 13 8 295 4 291 7.72e-27 110
MS.gene060366.t1 MTR_5g011200 29.393 313 184 12 3 296 12 306 1.53e-26 108
MS.gene060366.t1 MTR_2g021190 31.014 345 195 17 8 329 21 345 3.46e-26 108
MS.gene060366.t1 MTR_8g098830 38.857 175 101 4 176 347 35 206 4.22e-26 104
MS.gene060366.t1 MTR_1g068875 28.743 334 195 12 8 318 4 317 5.28e-26 107
MS.gene060366.t1 MTR_2g025420 29.428 367 194 15 8 325 6 356 1.35e-25 107
MS.gene060366.t1 MTR_8g467140 30.795 302 185 12 6 296 30 318 2.34e-25 105
MS.gene060366.t1 MTR_3g072470 27.830 424 198 16 11 355 22 416 2.47e-25 106
MS.gene060366.t1 MTR_4g061340 27.647 340 205 12 8 326 26 345 3.83e-25 105
MS.gene060366.t1 MTR_2g021050 32.698 315 151 17 8 295 5 285 5.70e-25 104
MS.gene060366.t1 MTR_5g023000 52.083 96 42 2 273 366 6 99 5.78e-25 97.8
MS.gene060366.t1 MTR_6g027910 30.864 324 170 14 11 300 12 315 6.71e-25 104
MS.gene060366.t1 MTR_1g094210 29.086 361 182 18 7 333 56 376 6.82e-25 105
MS.gene060366.t1 MTR_4g133170 29.042 334 189 13 8 316 4 314 8.68e-25 104
MS.gene060366.t1 MTR_7g056390 30.183 328 165 12 11 293 21 329 1.07e-24 104
MS.gene060366.t1 MTR_1g097490 30.245 367 217 15 5 355 46 389 1.56e-24 103
MS.gene060366.t1 MTR_1g068860 31.392 309 172 15 8 295 4 293 2.74e-24 102
MS.gene060366.t1 MTR_1g056710 29.773 309 174 11 8 296 34 319 3.87e-24 102
MS.gene060366.t1 MTR_1g094210 28.947 380 201 19 7 355 56 397 5.31e-24 102
MS.gene060366.t1 MTR_3g007330 31.046 306 167 13 8 295 48 327 6.00e-24 102
MS.gene060366.t1 MTR_3g036290 31.803 305 168 15 8 300 22 298 8.03e-24 101
MS.gene060366.t1 MTR_2g055970 31.715 309 175 16 5 296 208 497 2.44e-23 101
MS.gene060366.t1 MTR_7g056003 27.869 366 179 15 11 316 18 358 2.86e-23 100
MS.gene060366.t1 MTR_3g010390 30.408 319 175 16 8 295 33 335 2.86e-23 100
MS.gene060366.t1 MTR_3g009240 31.293 294 175 11 8 291 36 312 2.94e-23 100
MS.gene060366.t1 MTR_8g101580 27.616 344 214 15 8 332 45 372 4.47e-23 99.8
MS.gene060366.t1 MTR_2g029990 27.642 369 226 16 9 355 52 401 4.88e-23 99.8
MS.gene060366.t1 MTR_6g013270 28.662 314 194 10 7 304 28 327 5.53e-23 99.4
MS.gene060366.t1 MTR_7g070880 27.603 413 220 19 8 355 21 419 5.57e-23 99.8
MS.gene060366.t1 MTR_3g083010 27.628 409 229 18 8 363 6 400 6.11e-23 99.8
MS.gene060366.t1 MTR_2g028160 26.735 389 221 15 8 344 5 381 6.71e-23 99.4
MS.gene060366.t1 MTR_5g022420 30.565 301 173 15 7 296 26 301 8.47e-23 98.6
MS.gene060366.t1 MTR_0667s0010 27.500 360 208 12 8 332 6 347 8.96e-23 99.0
MS.gene060366.t1 MTR_1g097560 28.571 350 198 16 5 332 33 352 1.02e-22 98.6
MS.gene060366.t1 MTR_7g056290 28.571 427 191 20 11 355 25 419 1.09e-22 99.0
MS.gene060366.t1 MTR_3g007430 29.085 306 183 12 11 300 46 333 1.79e-22 97.8
MS.gene060366.t1 MTR_5g046300 29.470 302 169 13 8 291 4 279 2.62e-22 97.1
MS.gene060366.t1 MTR_5g046290 29.470 302 169 13 8 291 4 279 2.62e-22 97.1
MS.gene060366.t1 MTR_1g115160 28.956 297 187 12 6 296 20 298 2.94e-22 97.1
MS.gene060366.t1 MTR_7g079450 42.537 134 68 3 229 358 3 131 3.39e-22 91.7
MS.gene060366.t1 MTR_4g122860 34.759 187 86 6 180 358 156 314 3.44e-22 96.3
MS.gene060366.t1 MTR_4g122860 50.000 92 40 3 1 89 60 148 7.53e-13 69.3
MS.gene060366.t1 MTR_4g107820 27.673 318 196 9 8 311 36 333 3.48e-22 97.1
MS.gene060366.t1 MTR_4g107780 27.673 318 196 9 8 311 36 333 3.48e-22 97.1
MS.gene060366.t1 MTR_3g006670 30.820 305 169 14 8 291 49 332 3.51e-22 97.4
MS.gene060366.t1 MTR_3g009310 31.908 304 172 16 8 295 42 326 4.07e-22 97.1
MS.gene060366.t1 MTR_7g070830 27.989 368 194 16 8 316 21 376 4.32e-22 97.1
MS.gene060366.t1 MTR_4g031770 26.490 302 194 9 8 296 4 290 4.73e-22 96.3
MS.gene060366.t1 MTR_1g114700 28.571 308 183 9 8 296 29 318 4.84e-22 96.7
MS.gene060366.t1 MTR_4g107820 27.673 318 196 9 8 311 36 333 5.31e-22 96.7
MS.gene060366.t1 MTR_4g107780 27.673 318 196 9 8 311 36 333 6.01e-22 96.7
MS.gene060366.t1 MTR_2g078900 30.519 308 169 14 8 296 33 314 7.27e-22 95.9
MS.gene060366.t1 MTR_5g007610 31.861 317 166 16 8 295 41 336 7.35e-22 96.3
MS.gene060366.t1 MTR_3g014540 29.412 306 181 14 8 296 29 316 8.39e-22 95.9
MS.gene060366.t1 MTR_1g097330 28.990 307 176 13 8 296 16 298 9.67e-22 96.3
MS.gene060366.t1 MTR_0464s0020 28.442 443 194 20 3 355 18 427 1.23e-21 95.9
MS.gene060366.t1 MTR_2g426090 29.787 329 160 16 11 295 9 310 1.37e-21 95.5
MS.gene060366.t1 MTR_2g046900 26.741 359 209 15 7 332 27 364 1.73e-21 95.1
MS.gene060366.t1 MTR_7g070440 29.721 323 170 15 7 295 6 305 1.74e-21 94.7
MS.gene060366.t1 MTR_5g057710 29.677 310 181 14 8 300 46 335 1.81e-21 95.1
MS.gene060366.t1 MTR_5g057690 28.691 359 223 13 8 355 46 382 3.24e-21 94.4
MS.gene060366.t1 MTR_1g055070 27.273 286 165 10 8 262 49 322 3.27e-21 94.4
MS.gene060366.t1 MTR_3g437520 28.426 394 173 16 3 316 18 382 3.81e-21 94.7
MS.gene060366.t1 MTR_2g104340 25.831 391 233 14 8 355 14 390 4.33e-21 94.0
MS.gene060366.t1 MTR_3g023930 27.642 369 210 13 8 355 34 366 5.04e-21 93.6
MS.gene060366.t1 MTR_2g046920 28.197 305 187 12 7 297 23 309 5.84e-21 93.6
MS.gene060366.t1 MTR_2g028110 26.065 399 218 15 8 365 4 366 7.08e-21 93.2
MS.gene060366.t1 MTR_2g031720 28.022 364 195 15 7 331 5 340 9.73e-21 92.8
MS.gene060366.t1 MTR_2g021155 29.097 299 190 10 8 296 36 322 9.76e-21 94.4
MS.gene060366.t1 MTR_1g055200 54.321 81 35 1 106 184 5 85 1.05e-20 86.3
MS.gene060366.t1 MTR_4g024890 30.719 306 182 14 7 291 9 305 1.15e-20 92.8
MS.gene060366.t1 MTR_8g073550 35.437 206 115 8 7 205 29 223 1.25e-20 90.1
MS.gene060366.t1 MTR_5g069930 26.437 348 203 16 6 316 4 335 1.30e-20 92.4
MS.gene060366.t1 MTR_8g046310 26.720 378 226 14 11 358 19 375 1.42e-20 92.4
MS.gene060366.t1 MTR_6g004660 26.613 372 243 13 7 355 15 379 1.62e-20 92.0
MS.gene060366.t1 MTR_5g069760 26.608 342 207 13 4 316 2 328 1.77e-20 92.0
MS.gene060366.t1 MTR_6g065980 29.333 300 163 14 8 291 16 282 1.87e-20 91.7
MS.gene060366.t1 MTR_4g030830 26.700 397 229 17 8 355 9 392 1.96e-20 92.0
MS.gene060366.t1 MTR_3g007410 27.187 320 194 13 11 311 55 354 2.14e-20 92.0
MS.gene060366.t1 MTR_5g057020 30.033 303 182 13 8 304 46 324 2.52e-20 91.3
MS.gene060366.t1 MTR_3g007360 27.193 342 215 14 11 336 55 378 3.11e-20 91.7
MS.gene060366.t1 MTR_3g013740 30.721 319 184 16 5 299 41 346 3.26e-20 91.7
MS.gene060366.t1 MTR_3g083640 28.710 310 171 12 8 296 55 335 3.94e-20 91.3
MS.gene060366.t1 MTR_2g021210 27.164 335 210 13 8 329 84 397 4.84e-20 91.3
MS.gene060366.t1 MTR_2g026010 29.582 311 179 12 8 295 4 297 5.02e-20 90.9
MS.gene060366.t1 MTR_2g426070 26.875 320 188 11 9 295 7 313 6.15e-20 90.9
MS.gene060366.t1 MTR_2g426060 28.000 325 179 15 8 295 6 312 9.36e-20 90.1
MS.gene060366.t1 MTR_3g024110 28.333 300 182 12 8 296 101 378 1.02e-19 90.5
MS.gene060366.t1 MTR_1g112930 29.605 304 176 14 8 296 25 305 1.32e-19 89.4
MS.gene060366.t1 MTR_1g058190 28.247 308 181 11 8 304 35 313 1.67e-19 89.0
MS.gene060366.t1 MTR_2g024110 27.922 308 176 14 8 291 4 289 1.98e-19 89.0
MS.gene060366.t1 MTR_7g055987 29.429 333 185 13 11 313 23 335 2.89e-19 88.6
MS.gene060366.t1 MTR_7g066000 28.889 315 188 12 5 291 22 328 4.19e-19 88.2
MS.gene060366.t1 MTR_3g013770 31.290 310 174 16 8 296 33 324 5.83e-19 87.8
MS.gene060366.t1 MTR_7g007300 27.778 306 175 12 8 296 103 379 6.51e-19 88.2
MS.gene060366.t1 MTR_3g436150 31.132 318 163 16 8 291 32 327 6.68e-19 87.8
MS.gene060366.t1 MTR_3g010590 26.667 300 182 12 8 296 39 311 7.34e-19 87.4
MS.gene060366.t1 MTR_0044s0300 28.758 306 178 12 8 296 38 320 7.90e-19 87.4
MS.gene060366.t1 MTR_4g023430 53.763 93 39 2 2 94 35 123 8.05e-19 84.7
MS.gene060366.t1 MTR_4g023430 44.578 83 39 3 288 365 141 221 4.53e-12 65.5
MS.gene060366.t1 MTR_7g445890 25.562 356 191 12 6 316 14 340 9.16e-19 87.0
MS.gene060366.t1 MTR_3g010920 25.683 366 225 11 8 355 44 380 1.03e-18 87.0
MS.gene060366.t1 MTR_7g057270 31.118 331 163 17 8 293 26 336 1.04e-18 87.4
MS.gene060366.t1 MTR_2g031640 27.528 356 201 13 8 331 6 336 1.36e-18 86.7
MS.gene060366.t1 MTR_5g046260 27.645 293 156 13 8 291 4 249 1.44e-18 85.5
MS.gene060366.t1 MTR_6g053260 28.526 312 195 13 8 305 337 634 1.58e-18 87.4
MS.gene060366.t1 MTR_3g096250 28.000 300 151 10 8 296 47 292 1.80e-18 85.9
MS.gene060366.t1 MTR_3g007300 30.492 305 160 14 8 303 49 310 1.98e-18 85.9
MS.gene060366.t1 MTR_0760s0010 26.519 362 222 14 13 355 52 388 2.37e-18 85.9
MS.gene060366.t1 MTR_2g031680 26.687 326 182 14 8 306 6 301 2.43e-18 85.9
MS.gene060366.t1 MTR_2g021252 27.405 343 190 15 11 329 50 357 2.44e-18 85.9
MS.gene060366.t1 MTR_2g046830 29.276 304 185 13 7 297 24 310 2.55e-18 85.9
MS.gene060366.t1 MTR_1g055375 29.085 306 182 15 11 296 7 297 2.59e-18 85.5
MS.gene060366.t1 MTR_2g024100 28.289 304 164 12 23 291 22 306 3.14e-18 85.9
MS.gene060366.t1 MTR_3g014570 29.126 309 176 14 8 295 29 315 3.15e-18 85.5
MS.gene060366.t1 MTR_4g129190 26.290 407 215 18 8 354 6 387 3.59e-18 85.5
MS.gene060366.t1 MTR_3g030330 28.188 298 185 11 8 296 20 297 4.81e-18 84.7
MS.gene060366.t1 MTR_2g425980 28.221 326 178 14 8 295 5 312 5.07e-18 85.1
MS.gene060366.t1 MTR_7g407070 29.503 322 169 16 8 291 32 333 5.34e-18 85.1
MS.gene060366.t1 MTR_1g115185 26.861 309 197 8 3 296 33 327 5.39e-18 85.1
MS.gene060366.t1 MTR_3g010620 26.174 298 180 9 11 297 39 307 6.41e-18 84.7
MS.gene060366.t1 MTR_6g021880 27.957 372 213 19 18 355 30 380 7.03e-18 84.3
MS.gene060366.t1 MTR_3g030250 25.566 309 176 12 8 296 37 311 9.55e-18 84.0
MS.gene060366.t1 MTR_3g010520 27.362 307 165 14 8 296 25 291 1.07e-17 84.0
MS.gene060366.t1 MTR_2g021770 25.622 402 241 17 11 363 15 407 1.24e-17 84.0
MS.gene060366.t1 MTR_4g070550 28.395 324 175 14 8 291 5 311 1.29e-17 84.0
MS.gene060366.t1 MTR_1g055055 28.477 302 172 14 8 297 26 295 1.30e-17 83.2
MS.gene060366.t1 MTR_2g078850 29.470 302 177 11 11 296 33 314 1.47e-17 83.6
MS.gene060366.t1 MTR_3g011020 28.525 305 176 14 8 296 28 306 1.58e-17 83.6
MS.gene060366.t1 MTR_3g011100 29.180 305 177 13 8 291 235 521 1.60e-17 84.3
MS.gene060366.t1 MTR_8g099460 26.899 316 184 12 8 295 5 301 2.33e-17 83.2
MS.gene060366.t1 MTR_2g047832 27.246 334 173 16 7 297 28 334 2.43e-17 83.2
MS.gene060366.t1 MTR_8g064890 25.831 391 239 20 7 363 15 388 2.51e-17 82.8
MS.gene060366.t1 MTR_2g047200 26.866 402 215 21 6 355 18 392 2.61e-17 82.8
MS.gene060366.t1 MTR_6g014720 26.032 315 186 9 7 304 25 309 3.19e-17 82.4
MS.gene060366.t1 MTR_4g019990 27.515 338 194 16 5 306 3 325 3.60e-17 82.4
MS.gene060366.t1 MTR_7g056760 28.931 318 189 14 6 293 21 331 3.65e-17 82.8
MS.gene060366.t1 MTR_3g006500 26.899 316 185 11 2 296 11 301 4.44e-17 82.0
MS.gene060366.t1 MTR_3g010970 26.421 299 179 10 11 296 51 321 4.48e-17 82.4
MS.gene060366.t1 MTR_3g036430 28.094 299 161 11 8 296 20 274 4.58e-17 81.6
MS.gene060366.t1 MTR_7g056170 26.196 439 194 21 1 355 66 458 4.86e-17 82.4
MS.gene060366.t1 MTR_7g055930 25.571 438 223 20 1 355 6 423 7.05e-17 82.0
MS.gene060366.t1 MTR_1g088120 27.692 325 193 12 6 295 8 325 1.01e-16 81.3
MS.gene060366.t1 MTR_3g007270 24.419 344 216 8 8 322 47 375 1.03e-16 81.3
MS.gene060366.t1 MTR_3g010430 27.362 307 186 12 8 296 36 323 1.47e-16 80.9
MS.gene060366.t1 MTR_2g025960 29.389 262 141 11 103 329 1 253 1.60e-16 79.7
MS.gene060366.t1 MTR_7g062060 25.806 403 230 18 7 355 11 398 1.74e-16 80.5
MS.gene060366.t1 MTR_4g130330 26.554 354 204 18 4 314 3 343 1.77e-16 80.5
MS.gene060366.t1 MTR_3g024040 27.575 301 184 11 15 305 38 314 1.78e-16 80.5
MS.gene060366.t1 MTR_7g069550 25.341 367 214 15 5 324 11 364 1.90e-16 80.5
MS.gene060366.t1 MTR_7g066100 26.781 407 226 16 5 358 8 395 1.90e-16 80.5
MS.gene060366.t1 MTR_6g090180 25.635 394 217 17 2 338 41 415 2.47e-16 80.5
MS.gene060366.t1 MTR_4g080200 28.526 312 165 15 6 291 1 280 3.16e-16 79.3
MS.gene060366.t1 MTR_3g006570 26.821 302 192 12 8 296 21 306 3.27e-16 79.7
MS.gene060366.t1 MTR_6g053240 26.300 327 188 12 8 305 28 330 3.62e-16 79.7
MS.gene060366.t1 MTR_2g034700 26.331 338 206 13 2 314 8 327 4.06e-16 79.3
MS.gene060366.t1 MTR_6g048120 26.398 322 188 14 8 301 36 336 4.33e-16 79.3
MS.gene060366.t1 MTR_0115s0020 23.469 392 252 14 8 357 10 395 4.33e-16 79.3
MS.gene060366.t1 MTR_7g055870 25.508 443 217 19 1 355 6 423 4.36e-16 79.3
MS.gene060366.t1 MTR_5g072060 25.278 360 218 15 8 335 6 346 5.92e-16 79.7
MS.gene060366.t1 MTR_3g010870 24.917 301 193 10 8 296 37 316 7.83e-16 78.6
MS.gene060366.t1 MTR_8g062660 26.349 315 188 10 7 296 21 316 8.22e-16 79.3
MS.gene060366.t1 MTR_8g464770 25.330 379 242 17 8 358 12 377 8.26e-16 78.2
MS.gene060366.t1 MTR_0064s0160 25.377 398 245 15 8 365 42 427 8.81e-16 78.6
MS.gene060366.t1 MTR_3g030240 24.918 305 178 10 8 296 40 309 9.92e-16 78.2
MS.gene060366.t1 MTR_0242s0060 28.144 334 176 12 6 293 7 322 9.99e-16 78.6
MS.gene060366.t1 MTR_0242s0040 28.144 334 176 12 6 293 7 322 9.99e-16 78.6
MS.gene060366.t1 MTR_6g017280 25.620 363 194 20 6 316 7 345 1.40e-15 77.8
MS.gene060366.t1 MTR_4g013180 26.385 379 217 17 6 337 9 372 1.69e-15 77.8
MS.gene060366.t1 MTR_5g057643 32.663 199 108 8 8 192 46 232 2.10e-15 75.9
MS.gene060366.t1 MTR_7g028660 28.135 327 177 14 6 295 9 314 2.13e-15 77.0
MS.gene060366.t1 MTR_7g060940 25.432 405 227 16 1 356 15 393 2.23e-15 77.0
MS.gene060366.t1 MTR_2g047878 24.093 386 219 16 4 355 17 362 2.64e-15 76.6
MS.gene060366.t1 MTR_6g034720 42.718 103 56 2 145 247 73 172 2.77e-15 74.3
MS.gene060366.t1 MTR_4g037465 26.486 370 213 16 7 334 20 372 3.51e-15 76.6
MS.gene060366.t1 MTR_7g091630 26.586 331 185 15 4 293 28 341 3.58e-15 76.6
MS.gene060366.t1 MTR_7g013590 29.032 310 185 14 11 302 39 331 3.98e-15 76.6
MS.gene060366.t1 MTR_4g055820 25.588 340 200 13 8 303 14 344 4.08e-15 76.3
MS.gene060366.t1 MTR_5g023570 44.545 110 53 4 7 116 36 137 5.34e-15 72.0
MS.gene060366.t1 MTR_3g024150 26.299 308 177 13 11 296 38 317 5.94e-15 75.9
MS.gene060366.t1 MTR_6g007135 25.949 316 191 11 8 298 26 323 7.29e-15 75.5
MS.gene060366.t1 MTR_7g091640 28.267 329 178 16 4 293 31 340 7.64e-15 75.5
MS.gene060366.t1 MTR_3g009260 29.252 294 172 12 11 291 44 314 8.10e-15 75.5
MS.gene060366.t1 MTR_7g066850 24.339 378 222 17 6 335 21 382 8.48e-15 75.9
MS.gene060366.t1 MTR_1g055145 53.333 75 33 2 209 282 129 202 1.43e-14 73.6
MS.gene060366.t1 MTR_1g055145 52.222 90 38 4 20 108 45 130 3.39e-14 72.4
MS.gene060366.t1 MTR_5g037680 23.678 397 244 17 1 355 1 380 1.61e-14 75.1
MS.gene060366.t1 MTR_7g077970 28.399 331 179 15 8 293 7 324 1.61e-14 74.7
MS.gene060366.t1 MTR_6g055210 27.879 330 171 14 7 290 21 329 2.07e-14 74.7
MS.gene060366.t1 MTR_4g030760 24.808 391 225 18 5 356 70 430 2.37e-14 74.3
MS.gene060366.t1 MTR_4g028750 26.257 358 207 16 2 316 10 353 2.46e-14 73.9
MS.gene060366.t1 MTR_2g078870 29.379 177 105 5 123 296 78 237 2.98e-14 73.2
MS.gene060366.t1 MTR_5g048160 27.103 321 192 15 8 291 4 319 3.59e-14 73.6
MS.gene060366.t1 MTR_2g046800 27.190 331 183 17 8 296 14 328 3.70e-14 73.6
MS.gene060366.t1 MTR_7g062100 27.692 390 222 20 8 355 24 395 3.86e-14 73.6
MS.gene060366.t1 MTR_7g061060 26.667 360 190 17 5 316 10 343 4.00e-14 73.6
MS.gene060366.t1 MTR_0267s0050 26.415 371 220 16 5 334 4 362 5.40e-14 73.2
MS.gene060366.t1 MTR_3g013950 25.250 400 240 16 5 360 4 388 5.87e-14 72.8
MS.gene060366.t1 MTR_0649s0020 24.682 393 234 16 8 355 11 386 5.97e-14 72.8
MS.gene060366.t1 MTR_3g464470 24.084 382 211 14 3 331 2 357 7.04e-14 72.8
MS.gene060366.t1 MTR_7g067680 26.861 309 165 15 8 296 49 316 8.19e-14 72.4
MS.gene060366.t1 MTR_6g016285 24.396 414 233 16 6 355 19 416 8.19e-14 72.8
MS.gene060366.t1 MTR_7g078860 27.829 327 192 11 1 293 1 317 1.01e-13 72.4
MS.gene060366.t1 MTR_2g031700 26.692 266 151 10 8 251 6 249 1.04e-13 71.2
MS.gene060366.t1 MTR_7g055977 27.461 386 198 20 6 337 5 362 1.09e-13 72.0
MS.gene060366.t1 MTR_0054s0090 22.222 396 254 15 7 357 16 402 1.36e-13 72.0
MS.gene060366.t1 MTR_0831s0010 24.938 401 223 18 3 355 45 415 1.60e-13 71.6
MS.gene060366.t1 MTR_3g036335 26.710 307 177 13 8 291 41 322 1.61e-13 71.6
MS.gene060366.t1 MTR_7g066010 24.339 378 198 15 4 336 17 351 1.76e-13 71.2
MS.gene060366.t1 MTR_2g437110 26.158 367 219 17 6 335 20 371 1.83e-13 71.6
MS.gene060366.t1 MTR_6g017270 30.348 201 116 10 6 188 7 201 1.84e-13 71.2
MS.gene060366.t1 MTR_5g056020 25.178 421 236 19 2 355 11 419 1.93e-13 71.6
MS.gene060366.t1 MTR_3g023940 25.243 309 190 12 8 296 34 321 2.00e-13 71.2
MS.gene060366.t1 MTR_7g056260 28.313 332 164 17 6 293 12 313 2.14e-13 70.5
MS.gene060366.t1 MTR_0097s0030 25.946 370 204 15 4 331 10 351 2.28e-13 71.2
MS.gene060366.t1 MTR_2g047240 25.946 370 204 15 4 331 10 351 2.28e-13 71.2
MS.gene060366.t1 MTR_5g069390 24.818 411 235 22 8 363 26 417 2.63e-13 71.2
MS.gene060366.t1 MTR_1g050542 23.810 294 194 12 7 290 57 330 2.92e-13 70.9
MS.gene060366.t1 MTR_5g008530 63.934 61 19 2 5 65 15 72 3.08e-13 64.7
MS.gene060366.t1 MTR_8g063440 24.346 382 245 16 5 355 9 377 3.27e-13 70.5
MS.gene060366.t1 MTR_4g024870 27.468 233 147 9 9 228 45 268 3.36e-13 70.9
MS.gene060366.t1 MTR_3g058480 32.692 208 108 10 8 190 39 239 3.41e-13 70.1
MS.gene060366.t1 MTR_7g022600 26.488 336 185 14 5 291 20 342 3.89e-13 70.5
MS.gene060366.t1 MTR_3g030350 28.296 311 163 16 8 291 35 312 4.09e-13 70.5
MS.gene060366.t1 MTR_3g058470 26.239 343 178 15 8 321 37 333 4.64e-13 70.1
MS.gene060366.t1 MTR_2g021950 25.779 353 194 17 11 314 19 352 4.72e-13 70.1
MS.gene060366.t1 MTR_3g011120 24.363 353 200 14 2 314 8 333 5.08e-13 70.1
MS.gene060366.t1 MTR_7g079640 24.267 375 206 16 8 338 13 353 5.17e-13 70.1
MS.gene060366.t1 MTR_2g047892 26.444 329 172 14 6 291 20 321 6.75e-13 69.7
MS.gene060366.t1 MTR_5g043160 26.975 367 192 18 10 312 52 406 7.24e-13 69.7
MS.gene060366.t1 MTR_5g046280 28.061 196 113 8 108 291 3 182 9.19e-13 67.8
MS.gene060366.t1 MTR_1g015730 27.077 325 170 14 7 293 8 303 9.22e-13 69.3
MS.gene060366.t1 MTR_7g017170 25.532 329 190 17 8 295 18 332 1.05e-12 69.3
MS.gene060366.t1 MTR_7g052670 24.697 413 240 17 6 355 19 423 1.09e-12 69.3
MS.gene060366.t1 MTR_7g066030 24.682 393 218 14 1 337 14 384 1.14e-12 68.9
MS.gene060366.t1 MTR_7g078040 28.655 342 173 13 8 293 9 335 1.18e-12 69.3
MS.gene060366.t1 MTR_7g017130 25.532 329 190 17 8 295 18 332 1.23e-12 68.9
MS.gene060366.t1 MTR_7g056570 25.210 357 191 16 7 316 17 344 1.47e-12 68.9
MS.gene060366.t1 MTR_3g464500 24.282 383 212 15 3 331 22 380 1.49e-12 68.6
MS.gene060366.t1 MTR_5g057040 31.000 200 110 10 8 192 46 232 1.83e-12 69.3
MS.gene060366.t1 MTR_1g071010 23.256 387 252 15 3 355 10 385 2.01e-12 68.2
MS.gene060366.t1 MTR_3g010440 34.586 133 79 4 8 136 26 154 2.17e-12 67.8
MS.gene060366.t1 MTR_3g009300 25.070 359 200 16 11 344 37 351 2.21e-12 67.8
MS.gene060366.t1 MTR_6g004210 25.382 327 200 14 19 310 36 353 2.36e-12 68.2
MS.gene060366.t1 MTR_7g016930 25.157 318 183 15 5 292 13 305 2.59e-12 67.4
MS.gene060366.t1 MTR_7g050480 26.923 338 182 12 1 302 15 323 2.62e-12 67.8
MS.gene060366.t1 MTR_6g042600 37.342 158 66 6 11 160 39 171 2.97e-12 67.8
MS.gene060366.t1 MTR_3g006640 25.764 229 134 6 107 311 20 236 3.28e-12 67.0
MS.gene060366.t1 MTR_7g056200 23.362 351 194 11 6 316 21 336 4.27e-12 67.4
MS.gene060366.t1 MTR_7g035295 24.566 403 213 16 6 355 14 378 7.98e-12 66.6
MS.gene060366.t1 MTR_4g013185 25.970 335 192 14 7 293 9 335 8.95e-12 66.2
MS.gene060366.t1 MTR_2g064950 24.289 387 216 14 8 342 10 371 1.19e-11 65.9
MS.gene060366.t1 MTR_7g061050 25.625 320 183 13 5 291 10 307 1.21e-11 65.9
MS.gene060366.t1 MTR_1g054575 25.246 305 188 14 8 296 52 332 1.67e-11 65.9
MS.gene060366.t1 MTR_3g096280 25.914 301 168 12 20 302 17 280 2.29e-11 64.7
MS.gene060366.t1 MTR_7g078840 26.667 345 195 13 1 293 3 341 2.81e-11 65.1
MS.gene060366.t1 MTR_6g017305 25.000 232 133 9 120 316 14 239 2.91e-11 63.9
MS.gene060366.t1 MTR_0627s0010 24.495 396 224 19 8 343 38 418 3.99e-11 64.3
MS.gene060366.t1 MTR_7g050520 26.822 343 176 13 1 302 15 323 4.13e-11 64.3
MS.gene060366.t1 MTR_2g010950 23.797 395 243 15 8 355 20 403 4.41e-11 64.3
MS.gene060366.t1 MTR_7g061010 27.660 329 170 15 3 293 17 315 5.58e-11 63.9
MS.gene060366.t1 MTR_4g011660 23.659 410 245 15 5 355 16 416 7.64e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060366.t1 AT3G23880 32.249 369 213 16 3 349 5 358 2.24e-31 122
MS.gene060366.t1 AT3G06240 28.070 399 226 17 5 355 33 418 5.32e-23 99.8
MS.gene060366.t1 AT4G22390 26.000 350 214 14 9 333 5 334 2.02e-18 86.3
MS.gene060366.t1 AT4G22390 26.000 350 214 14 9 333 5 334 2.02e-18 86.3
MS.gene060366.t1 AT4G12560 28.296 311 189 15 8 295 4 303 4.67e-18 85.5
MS.gene060366.t1 AT4G12560 28.296 311 189 15 8 295 4 303 4.67e-18 85.5
MS.gene060366.t1 AT4G12560 28.296 311 189 15 8 295 4 303 4.67e-18 85.5
MS.gene060366.t1 AT1G33530 26.689 296 191 12 3 292 92 367 2.19e-16 80.5
MS.gene060366.t1 AT1G30790 26.875 320 198 12 8 303 9 316 7.92e-16 78.6
MS.gene060366.t1 AT5G49610 27.795 331 181 14 7 309 8 308 2.45e-13 70.9
MS.gene060366.t1 AT3G52320 25.581 344 224 12 8 340 27 349 2.70e-13 70.9
MS.gene060366.t1 AT3G17530 23.103 290 194 10 8 282 6 281 4.52e-12 67.4
MS.gene060366.t1 AT3G10430 33.333 159 89 6 8 159 5 153 5.37e-12 67.0
MS.gene060366.t1 AT1G47790 24.561 285 196 8 8 287 25 295 5.80e-12 67.0
MS.gene060366.t1 AT2G40910 23.323 313 199 12 8 295 62 358 1.97e-11 65.5
MS.gene060366.t1 AT2G40910 23.323 313 199 12 8 295 69 365 2.37e-11 65.1
MS.gene060366.t1 AT4G19940 23.481 362 234 11 8 340 35 382 4.32e-11 64.3

Find 83 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTACACATTGTGGTTTA+TGG 0.100871 8.4:+12974841 MS.gene060366:CDS
TATTTAGATCTTAGAATTAA+AGG 0.165690 8.4:+12974384 MS.gene060366:CDS
TATAAACATTTCTATGGTTT+TGG 0.167038 8.4:+12974507 MS.gene060366:CDS
AAACTCTGGGTTTGGATTAA+AGG 0.169325 8.4:-12974694 None:intergenic
CAAAATGTGAATTTGCAAAT+TGG 0.228313 8.4:-12974215 None:intergenic
AATTCATATAAACATTTCTA+TGG 0.273345 8.4:+12974501 MS.gene060366:CDS
ATAGAAATGTTTATATGAAT+TGG 0.289524 8.4:-12974499 None:intergenic
GTAGTAACAGATGGTTCTTA+TGG 0.310999 8.4:+12975029 MS.gene060366:CDS
ATTCTACGAGTGTGGGTTGC+GGG 0.312270 8.4:-12974246 None:intergenic
TTCTACACATTGTGGTTTAT+GGG 0.314260 8.4:+12974842 MS.gene060366:CDS
TATTGTTGCATTTCATTTAA+CGG 0.314412 8.4:+12974773 MS.gene060366:CDS
GATATGATGCAATTGATATA+TGG 0.320951 8.4:+12974898 MS.gene060366:CDS
GAAGGTGCAATTCTATAAAA+AGG 0.321573 8.4:-12974672 None:intergenic
TTGAAGAGAAACTCTGGGTT+TGG 0.338871 8.4:-12974702 None:intergenic
GAATCATAGTCAACATCAAC+TGG 0.373741 8.4:-12974822 None:intergenic
GATGGCACACCATTTGAGTT+TGG 0.374593 8.4:-12974585 None:intergenic
AGACGCACTTGTATTTCTAT+TGG 0.374649 8.4:+12975106 MS.gene060366:CDS
TGTGGTTTATGGGTATTTAG+AGG 0.378055 8.4:+12974852 MS.gene060366:CDS
TTCTAAGATCTAAATAAGAT+AGG 0.391677 8.4:-12974377 None:intergenic
TTAGAGGATTTCTCAGCCTA+TGG 0.393518 8.4:+12974868 MS.gene060366:CDS
TGCTCGTTGTCACCAGGAAC+AGG 0.396247 8.4:-12975158 None:intergenic
TAGTAACAGATGGTTCTTAT+GGG 0.404168 8.4:+12975030 MS.gene060366:CDS
ATGAAGTCGGTGGGACCAAC+AGG 0.407414 8.4:-12974972 None:intergenic
TTAAATGTGTTTGTAAGTCT+TGG 0.408309 8.4:+12974169 MS.gene060366:CDS
CTCATATCAAATTCACATCT+TGG 0.429715 8.4:+12974273 MS.gene060366:CDS
CAATGATGCTATTCACTGGT+TGG 0.435650 8.4:+12974722 MS.gene060366:CDS
TCTAAGATCTAAATAAGATA+GGG 0.439443 8.4:-12974376 None:intergenic
AAAATGAAGGTTTGGTGAAA+CGG 0.445079 8.4:-12974346 None:intergenic
CCACTCTTTGTACAACATAC+AGG 0.447432 8.4:-12974999 None:intergenic
AAGACTCTTGTTCTTCCTGT+TGG 0.456705 8.4:+12974957 MS.gene060366:CDS
CCACTCAACAGATGATTACT+TGG 0.457447 8.4:+12974536 MS.gene060366:CDS
GCATCATTGAAGAGAAACTC+TGG 0.469803 8.4:-12974708 None:intergenic
AATACAAAGTACATTCATCT+TGG 0.473647 8.4:+12974931 MS.gene060366:CDS
GATCGAATTCCAAACTCAAA+TGG 0.474811 8.4:+12974576 MS.gene060366:CDS
TACAAGTGCGTCTTTACAAA+AGG 0.480481 8.4:-12975096 None:intergenic
TCTTCAATGATGCTATTCAC+TGG 0.487695 8.4:+12974718 MS.gene060366:CDS
AAAGGCAAATGGGTAGTACT+TGG 0.490111 8.4:-12974654 None:intergenic
ATATGATGCAATTGATATAT+GGG 0.495926 8.4:+12974899 MS.gene060366:CDS
TTGCATTTCATTTAACGGAA+AGG 0.496118 8.4:+12974778 MS.gene060366:CDS
AATTCTACGAGTGTGGGTTG+CGG 0.497867 8.4:-12974247 None:intergenic
GTGCTTCAAGCCTCTACCTA+TGG 0.501610 8.4:+12974436 MS.gene060366:CDS
AACAGATGGTTCTTATGGGT+TGG 0.505722 8.4:+12975034 MS.gene060366:CDS
CTCAACAGATGATTACTTGG+TGG 0.509364 8.4:+12974539 MS.gene060366:CDS
AAACGTATTAGACACTTCAC+TGG 0.512661 8.4:-12974147 None:intergenic
GAATTAAAGGTTCATGTAGA+GGG 0.513006 8.4:+12974397 MS.gene060366:CDS
TAACCTTGCTCGTTGTCACC+AGG 0.523641 8.4:-12975164 None:intergenic
TGATAGTTCAAATTCTTCAA+AGG 0.527829 8.4:+12974121 MS.gene060366:CDS
TAGAGGATTTCTCAGCCTAT+GGG 0.528108 8.4:+12974869 MS.gene060366:CDS
CTAAGATCTAAATAAGATAG+GGG 0.529748 8.4:-12974375 None:intergenic
AGGTATTTGTTTGTGAACTC+CGG 0.539638 8.4:-12974469 None:intergenic
AGAATTAAAGGTTCATGTAG+AGG 0.542009 8.4:+12974396 MS.gene060366:CDS
CACTCTTTGTACAACATACA+GGG 0.563133 8.4:-12974998 None:intergenic
TGCAATTGATATATGGGTGA+TGG 0.565148 8.4:+12974905 MS.gene060366:CDS
ATTGAGAGCTAATGCATGGA+AGG 0.571771 8.4:+12974626 MS.gene060366:CDS
TAGTCAACATCAACTGGGAG+AGG 0.571901 8.4:-12974816 None:intergenic
TTCTACGAGTGTGGGTTGCG+GGG 0.574394 8.4:-12974245 None:intergenic
GGTGATATTGTAGTAACAGA+TGG 0.575324 8.4:+12975020 MS.gene060366:CDS
TGTTTGTGAACTCCGGTGGA+TGG 0.577672 8.4:-12974462 None:intergenic
GAGAAAAGCCACAAGTGAGA+TGG 0.578737 8.4:-12974603 None:intergenic
TGGATGGATTCCATAGGTAG+AGG 0.580952 8.4:-12974446 None:intergenic
GACTATGATTCTACACATTG+TGG 0.583006 8.4:+12974834 MS.gene060366:CDS
CATCATTGAAGAGAAACTCT+GGG 0.584497 8.4:-12974707 None:intergenic
TCTGGGTTTGGATTAAAGGA+AGG 0.586513 8.4:-12974690 None:intergenic
CATCATATCTCAAAACCCAT+AGG 0.591480 8.4:-12974884 None:intergenic
TCTCATTGAGAGCTAATGCA+TGG 0.591835 8.4:+12974622 MS.gene060366:CDS
TACCTATGGAATCCATCCAC+CGG 0.594761 8.4:+12974450 MS.gene060366:CDS
TGAGTGCAATTCTACGAGTG+TGG 0.605167 8.4:-12974254 None:intergenic
ATTTGAACTATCAATTCATG+AGG 0.614523 8.4:-12974111 None:intergenic
GTTCCTGGTGACAACGAGCA+AGG 0.617466 8.4:+12975161 MS.gene060366:CDS
ATGGTGTGCCATCTCACTTG+TGG 0.629802 8.4:+12974595 MS.gene060366:CDS
CCTGTATGTTGTACAAAGAG+TGG 0.630075 8.4:+12974999 MS.gene060366:CDS
TACAGGGAAAATGAAGTCGG+TGG 0.632059 8.4:-12974982 None:intergenic
GCTCGTTGTCACCAGGAACA+GGG 0.633306 8.4:-12975157 None:intergenic
TTGGTGAAATATAACAACAA+AGG 0.638031 8.4:+12975053 MS.gene060366:CDS
TATTTGTTTGTGAACTCCGG+TGG 0.640963 8.4:-12974466 None:intergenic
TAAGATCTAAATAAGATAGG+GGG 0.644182 8.4:-12974374 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.645443 8.4:-12974452 None:intergenic
ACAGGGAAAATGAAGTCGGT+GGG 0.646954 8.4:-12974981 None:intergenic
CCAAGTAATCATCTGTTGAG+TGG 0.662857 8.4:-12974536 None:intergenic
ACATACAGGGAAAATGAAGT+CGG 0.663561 8.4:-12974985 None:intergenic
GAGTGCAATTCTACGAGTGT+GGG 0.664592 8.4:-12974253 None:intergenic
TTATATGAATTGGAACACAA+AGG 0.673687 8.4:-12974489 None:intergenic
AATCATAGTCAACATCAACT+GGG 0.686130 8.4:-12974821 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCATATAAACATTTCTA+TGG + chr8.4:12974501-12974520 MS.gene060366:CDS 15.0%
!! ATAGAAATGTTTATATGAAT+TGG - chr8.4:12974502-12974521 None:intergenic 15.0%
!! TATTTAGATCTTAGAATTAA+AGG + chr8.4:12974384-12974403 MS.gene060366:CDS 15.0%
!! AATTCTATAAAAAGGCAAAT+GGG - chr8.4:12974667-12974686 None:intergenic 20.0%
!! ATATGATGCAATTGATATAT+GGG + chr8.4:12974899-12974918 MS.gene060366:CDS 20.0%
!! TATTGTTGCATTTCATTTAA+CGG + chr8.4:12974773-12974792 MS.gene060366:CDS 20.0%
!!! ATAAACATTTCTATGGTTTT+GGG + chr8.4:12974508-12974527 MS.gene060366:CDS 20.0%
!!! TATAAACATTTCTATGGTTT+TGG + chr8.4:12974507-12974526 MS.gene060366:CDS 20.0%
!!! TCTAAGATCTAAATAAGATA+GGG - chr8.4:12974379-12974398 None:intergenic 20.0%
!!! TTCTAAGATCTAAATAAGAT+AGG - chr8.4:12974380-12974399 None:intergenic 20.0%
! AATACAAAGTACATTCATCT+TGG + chr8.4:12974931-12974950 MS.gene060366:CDS 25.0%
! ATTTGAACTATCAATTCATG+AGG - chr8.4:12974114-12974133 None:intergenic 25.0%
! CAAAATGTGAATTTGCAAAT+TGG - chr8.4:12974218-12974237 None:intergenic 25.0%
! CAATTCTATAAAAAGGCAAA+TGG - chr8.4:12974668-12974687 None:intergenic 25.0%
! CTAAGATCTAAATAAGATAG+GGG - chr8.4:12974378-12974397 None:intergenic 25.0%
! GATATGATGCAATTGATATA+TGG + chr8.4:12974898-12974917 MS.gene060366:CDS 25.0%
! TAAGATCTAAATAAGATAGG+GGG - chr8.4:12974377-12974396 None:intergenic 25.0%
! TGATAGTTCAAATTCTTCAA+AGG + chr8.4:12974121-12974140 MS.gene060366:CDS 25.0%
! TTAAATGTGTTTGTAAGTCT+TGG + chr8.4:12974169-12974188 MS.gene060366:CDS 25.0%
! TTATATGAATTGGAACACAA+AGG - chr8.4:12974492-12974511 None:intergenic 25.0%
! TTGGTGAAATATAACAACAA+AGG + chr8.4:12975053-12975072 MS.gene060366:CDS 25.0%
AATCATAGTCAACATCAACT+GGG - chr8.4:12974824-12974843 None:intergenic 30.0%
AGAATTAAAGGTTCATGTAG+AGG + chr8.4:12974396-12974415 MS.gene060366:CDS 30.0%
ATTCTACACATTGTGGTTTA+TGG + chr8.4:12974841-12974860 MS.gene060366:CDS 30.0%
CTCATATCAAATTCACATCT+TGG + chr8.4:12974273-12974292 MS.gene060366:CDS 30.0%
GAATTAAAGGTTCATGTAGA+GGG + chr8.4:12974397-12974416 MS.gene060366:CDS 30.0%
TAGTAACAGATGGTTCTTAT+GGG + chr8.4:12975030-12975049 MS.gene060366:CDS 30.0%
TTCTACACATTGTGGTTTAT+GGG + chr8.4:12974842-12974861 MS.gene060366:CDS 30.0%
TTGCATTTCATTTAACGGAA+AGG + chr8.4:12974778-12974797 MS.gene060366:CDS 30.0%
! GAAGGTGCAATTCTATAAAA+AGG - chr8.4:12974675-12974694 None:intergenic 30.0%
!! AAAATGAAGGTTTGGTGAAA+CGG - chr8.4:12974349-12974368 None:intergenic 30.0%
AAACGTATTAGACACTTCAC+TGG - chr8.4:12974150-12974169 None:intergenic 35.0%
AAACTCTGGGTTTGGATTAA+AGG - chr8.4:12974697-12974716 None:intergenic 35.0%
ACATACAGGGAAAATGAAGT+CGG - chr8.4:12974988-12975007 None:intergenic 35.0%
AGGTATTTGTTTGTGAACTC+CGG - chr8.4:12974472-12974491 None:intergenic 35.0%
CACTCTTTGTACAACATACA+GGG - chr8.4:12975001-12975020 None:intergenic 35.0%
CATCATATCTCAAAACCCAT+AGG - chr8.4:12974887-12974906 None:intergenic 35.0%
CATCATTGAAGAGAAACTCT+GGG - chr8.4:12974710-12974729 None:intergenic 35.0%
GAATCATAGTCAACATCAAC+TGG - chr8.4:12974825-12974844 None:intergenic 35.0%
GACTATGATTCTACACATTG+TGG + chr8.4:12974834-12974853 MS.gene060366:CDS 35.0%
GATCGAATTCCAAACTCAAA+TGG + chr8.4:12974576-12974595 MS.gene060366:CDS 35.0%
GGTGATATTGTAGTAACAGA+TGG + chr8.4:12975020-12975039 MS.gene060366:CDS 35.0%
GTAGTAACAGATGGTTCTTA+TGG + chr8.4:12975029-12975048 MS.gene060366:CDS 35.0%
TACAAGTGCGTCTTTACAAA+AGG - chr8.4:12975099-12975118 None:intergenic 35.0%
TCTTCAATGATGCTATTCAC+TGG + chr8.4:12974718-12974737 MS.gene060366:CDS 35.0%
TGCAATTGATATATGGGTGA+TGG + chr8.4:12974905-12974924 MS.gene060366:CDS 35.0%
TGTGGTTTATGGGTATTTAG+AGG + chr8.4:12974852-12974871 MS.gene060366:CDS 35.0%
! AGACGCACTTGTATTTCTAT+TGG + chr8.4:12975106-12975125 MS.gene060366:CDS 35.0%
AAAGGCAAATGGGTAGTACT+TGG - chr8.4:12974657-12974676 None:intergenic 40.0%
AACAGATGGTTCTTATGGGT+TGG + chr8.4:12975034-12975053 MS.gene060366:CDS 40.0%
AAGACTCTTGTTCTTCCTGT+TGG + chr8.4:12974957-12974976 MS.gene060366:CDS 40.0%
ATAGGGGGCTCAAAAAATGA+AGG - chr8.4:12974362-12974381 None:intergenic 40.0%
ATTGAGAGCTAATGCATGGA+AGG + chr8.4:12974626-12974645 MS.gene060366:CDS 40.0%
CAATGATGCTATTCACTGGT+TGG + chr8.4:12974722-12974741 MS.gene060366:CDS 40.0%
CCAAGTAATCATCTGTTGAG+TGG - chr8.4:12974539-12974558 None:intergenic 40.0%
CCACTCAACAGATGATTACT+TGG + chr8.4:12974536-12974555 MS.gene060366:CDS 40.0%
CCACTCTTTGTACAACATAC+AGG - chr8.4:12975002-12975021 None:intergenic 40.0%
CCTGTATGTTGTACAAAGAG+TGG + chr8.4:12974999-12975018 MS.gene060366:CDS 40.0%
CTCAACAGATGATTACTTGG+TGG + chr8.4:12974539-12974558 MS.gene060366:CDS 40.0%
GCATCATTGAAGAGAAACTC+TGG - chr8.4:12974711-12974730 None:intergenic 40.0%
GGGCTCAAAAAATGAAGGTT+TGG - chr8.4:12974357-12974376 None:intergenic 40.0%
TAGAGGATTTCTCAGCCTAT+GGG + chr8.4:12974869-12974888 MS.gene060366:CDS 40.0%
TATTTGTTTGTGAACTCCGG+TGG - chr8.4:12974469-12974488 None:intergenic 40.0%
TCTCATTGAGAGCTAATGCA+TGG + chr8.4:12974622-12974641 MS.gene060366:CDS 40.0%
TCTGGGTTTGGATTAAAGGA+AGG - chr8.4:12974693-12974712 None:intergenic 40.0%
TTAGAGGATTTCTCAGCCTA+TGG + chr8.4:12974868-12974887 MS.gene060366:CDS 40.0%
TTGAAGAGAAACTCTGGGTT+TGG - chr8.4:12974705-12974724 None:intergenic 40.0%
ACAGGGAAAATGAAGTCGGT+GGG - chr8.4:12974984-12975003 None:intergenic 45.0%
GAGAAAAGCCACAAGTGAGA+TGG - chr8.4:12974606-12974625 None:intergenic 45.0%
GAGTGCAATTCTACGAGTGT+GGG - chr8.4:12974256-12974275 None:intergenic 45.0%
TACAGGGAAAATGAAGTCGG+TGG - chr8.4:12974985-12975004 None:intergenic 45.0%
TACCTATGGAATCCATCCAC+CGG + chr8.4:12974450-12974469 MS.gene060366:CDS 45.0%
TAGTCAACATCAACTGGGAG+AGG - chr8.4:12974819-12974838 None:intergenic 45.0%
TGAGTGCAATTCTACGAGTG+TGG - chr8.4:12974257-12974276 None:intergenic 45.0%
! AATTCTACGAGTGTGGGTTG+CGG - chr8.4:12974250-12974269 None:intergenic 45.0%
! GATGGCACACCATTTGAGTT+TGG - chr8.4:12974588-12974607 None:intergenic 45.0%
! TGGATGGATTCCATAGGTAG+AGG - chr8.4:12974449-12974468 None:intergenic 45.0%
ATGGTGTGCCATCTCACTTG+TGG + chr8.4:12974595-12974614 MS.gene060366:CDS 50.0%
GTGCTTCAAGCCTCTACCTA+TGG + chr8.4:12974436-12974455 MS.gene060366:CDS 50.0%
TAACCTTGCTCGTTGTCACC+AGG - chr8.4:12975167-12975186 None:intergenic 50.0%
TGTTTGTGAACTCCGGTGGA+TGG - chr8.4:12974465-12974484 None:intergenic 50.0%
! ATTCTACGAGTGTGGGTTGC+GGG - chr8.4:12974249-12974268 None:intergenic 50.0%
!! CTGCTTTTACTCCCTGTTCC+TGG + chr8.4:12975146-12975165 MS.gene060366:CDS 50.0%
!!! CACTGGTTGGCTTTTCGTCA+CGG + chr8.4:12974735-12974754 MS.gene060366:CDS 50.0%
!!! GTTGGCTTTTCGTCACGGTA+TGG + chr8.4:12974740-12974759 MS.gene060366:CDS 50.0%
ATGAAGTCGGTGGGACCAAC+AGG - chr8.4:12974975-12974994 None:intergenic 55.0%
GCTCGTTGTCACCAGGAACA+GGG - chr8.4:12975160-12975179 None:intergenic 55.0%
GTTCCTGGTGACAACGAGCA+AGG + chr8.4:12975161-12975180 MS.gene060366:CDS 55.0%
TGCTCGTTGTCACCAGGAAC+AGG - chr8.4:12975161-12975180 None:intergenic 55.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr8.4:12974455-12974474 None:intergenic 55.0%
! TTCTACGAGTGTGGGTTGCG+GGG - chr8.4:12974248-12974267 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 12974087 12975187 12974087 ID=MS.gene060366
chr8.4 mRNA 12974087 12975187 12974087 ID=MS.gene060366.t1;Parent=MS.gene060366
chr8.4 exon 12974087 12975187 12974087 ID=MS.gene060366.t1.exon1;Parent=MS.gene060366.t1
chr8.4 CDS 12974087 12975187 12974087 ID=cds.MS.gene060366.t1;Parent=MS.gene060366.t1
Gene Sequence

>MS.gene060366

ATGGAGACGAATTCAATGTTTCTTCCTCATGAATTGATAGTTCAAATTCTTCAAAGGTTACCAGTGAAGTGTCTAATACGTTTTAAATGTGTTTGTAAGTCTTGGTTTTCTCTTATTTCTCATGATCTCCAATTTGCAAATTCACATTTTGAAATTAACCCCGCAACCCACACTCGTAGAATTGCACTCATATCAAATTCACATCTTGGAACTCGATCTTTCAACATAGAAGCATCACTTAACGATGATTCTGCTGTTTCCGTTTCACCAAACCTTCATTTTTTGAGCCCCCTATCTTATTTAGATCTTAGAATTAAAGGTTCATGTAGAGGGTTTATATTGTTGCATTGTGCTTCAAGCCTCTACCTATGGAATCCATCCACCGGAGTTCACAAACAAATACCTTTGTGTTCCAATTCATATAAACATTTCTATGGTTTTGGGTATGACCACTCAACAGATGATTACTTGGTGGTTTCATTGTGCAATGATCGAATTCCAAACTCAAATGGTGTGCCATCTCACTTGTGGCTTTTCTCATTGAGAGCTAATGCATGGAAGGAATTTCCAAGTACTACCCATTTGCCTTTTTATAGAATTGCACCTTCCTTTAATCCAAACCCAGAGTTTCTCTTCAATGATGCTATTCACTGGTTGGCTTTTCGTCACGGTATGGATGTCTTTGTTATTGTTGCATTTCATTTAACGGAAAGGAAACTTATAGAGATTCCTCTCCCAGTTGATGTTGACTATGATTCTACACATTGTGGTTTATGGGTATTTAGAGGATTTCTCAGCCTATGGGTTTTGAGATATGATGCAATTGATATATGGGTGATGGAAGAATACAAAGTACATTCATCTTGGACTAAGACTCTTGTTCTTCCTGTTGGTCCCACCGACTTCATTTTCCCTGTATGTTGTACAAAGAGTGGTGATATTGTAGTAACAGATGGTTCTTATGGGTTGGTGAAATATAACAACAAAGGAGAGTTTCTAGAGCGTAACTCCTTTTGTAAAGACGCACTTGTATTTCTATTGGCTATGTATACAGAGTCTCTGCTTTTACTCCCTGTTCCTGGTGACAACGAGCAAGGTTAA

Protein sequence

>MS.gene060366.t1

METNSMFLPHELIVQILQRLPVKCLIRFKCVCKSWFSLISHDLQFANSHFEINPATHTRRIALISNSHLGTRSFNIEASLNDDSAVSVSPNLHFLSPLSYLDLRIKGSCRGFILLHCASSLYLWNPSTGVHKQIPLCSNSYKHFYGFGYDHSTDDYLVVSLCNDRIPNSNGVPSHLWLFSLRANAWKEFPSTTHLPFYRIAPSFNPNPEFLFNDAIHWLAFRHGMDVFVIVAFHLTERKLIEIPLPVDVDYDSTHCGLWVFRGFLSLWVLRYDAIDIWVMEEYKVHSSWTKTLVLPVGPTDFIFPVCCTKSGDIVVTDGSYGLVKYNNKGEFLERNSFCKDALVFLLAMYTESLLLLPVPGDNEQG