AlfalfaGEDB | MS.gene39262

M. sativa cultivar XinJiangDaYe / MS.gene39262

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39262.t1	RHN79377.1	73.1	134	34	1	1	134	288	419	6.30E-47	196.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39262.t1	A0A072VJR7	73.1	134	34	1	1	134	187	318	4.5e-47	196.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene39262	MS.gene57537	PPI
MS.gene034686	MS.gene39262	PPI
MS.gene39262	MS.gene40988	PPI
MS.gene070461	MS.gene39262	PPI
MS.gene39262	MS.gene24173	PPI
MS.gene39262	MS.gene036584	PPI
MS.gene39262	MS.gene036662	PPI
MS.gene39262	MS.gene033426	PPI
MS.gene39262	MS.gene27022	PPI
MS.gene39262	MS.gene88776	PPI
MS.gene39262	MS.gene035261	PPI
MS.gene87563	MS.gene39262	PPI
MS.gene39262	MS.gene023999	PPI
MS.gene39262	MS.gene69307	PPI
MS.gene051820	MS.gene39262	PPI
MS.gene041475	MS.gene39262	PPI
MS.gene39262	MS.gene036581	PPI
MS.gene39262	MS.gene019507	PPI
MS.gene81242	MS.gene39262	PPI
MS.gene27283	MS.gene39262	PPI
MS.gene39262	MS.gene000036	PPI
MS.gene39262	MS.gene50320	PPI
MS.gene51202	MS.gene39262	PPI
MS.gene39262	MS.gene58314	PPI
MS.gene39262	MS.gene87557	PPI
MS.gene39262	MS.gene51199	PPI
MS.gene39262	MS.gene035263	PPI
MS.gene87562	MS.gene39262	PPI
MS.gene39262	MS.gene67501	PPI
MS.gene39262	MS.gene96406	PPI
MS.gene39262	MS.gene27285	PPI
MS.gene39262	MS.gene053257	PPI
MS.gene39262	MS.gene77858	PPI
MS.gene39262	MS.gene51201	PPI
MS.gene39262	MS.gene77857	PPI
MS.gene39262	MS.gene50336	PPI
MS.gene26829	MS.gene39262	PPI
MS.gene064104	MS.gene39262	PPI
MS.gene39262	MS.gene57526	PPI
MS.gene39262	MS.gene069075	PPI
MS.gene39262	MS.gene77704	PPI
MS.gene43789	MS.gene39262	PPI
MS.gene39262	MS.gene047279	PPI
MS.gene39262	MS.gene060370	PPI
MS.gene39262	MS.gene50305	PPI
MS.gene39262	MS.gene024002	PPI
MS.gene39262	MS.gene032969	PPI
MS.gene072177	MS.gene39262	PPI
MS.gene58722	MS.gene39262	PPI
MS.gene39262	MS.gene68890	PPI
MS.gene064091	MS.gene39262	PPI
MS.gene045476	MS.gene39262	PPI
MS.gene39262	MS.gene42445	PPI
MS.gene39262	MS.gene86273	PPI
MS.gene50307	MS.gene39262	PPI
MS.gene39262	MS.gene26830	PPI
MS.gene43796	MS.gene39262	PPI
MS.gene39262	MS.gene40985	PPI
MS.gene39262	MS.gene072177	PPI
MS.gene39262	MS.gene038756	PPI
MS.gene39262	MS.gene92376	PPI
MS.gene58312	MS.gene39262	PPI
MS.gene39262	MS.gene51207	PPI
MS.gene39262	MS.gene63657	PPI
MS.gene39262	MS.gene059157	PPI
MS.gene39262	MS.gene023996	PPI
MS.gene39262	MS.gene57527	PPI
MS.gene39262	MS.gene58716	PPI
MS.gene39262	MS.gene045473	PPI
MS.gene39262	MS.gene50301	PPI
MS.gene39262	MS.gene070462	PPI
MS.gene58313	MS.gene39262	PPI
MS.gene39262	MS.gene54049	PPI
MS.gene39262	MS.gene031590	PPI
MS.gene066622	MS.gene39262	PPI
MS.gene39262	MS.gene066623	PPI
MS.gene39262	MS.gene064086	PPI
MS.gene39262	MS.gene035234	PPI
MS.gene39262	MS.gene064090	PPI
MS.gene036583	MS.gene39262	PPI
MS.gene88780	MS.gene39262	PPI
MS.gene87588	MS.gene39262	PPI
MS.gene39262	MS.gene90742	PPI
MS.gene39262	MS.gene24212	PPI
MS.gene39262	MS.gene066639	PPI
MS.gene39262	MS.gene50332	PPI
MS.gene39262	MS.gene024979	PPI
MS.gene96448	MS.gene39262	PPI
MS.gene39262	MS.gene041475	PPI
MS.gene39262	MS.gene64203	PPI
MS.gene041392	MS.gene39262	PPI
MS.gene069075	MS.gene39262	PPI
MS.gene39262	MS.gene24826	PPI
MS.gene39262	MS.gene40904	PPI
MS.gene39262	MS.gene43790	PPI
MS.gene39262	MS.gene032970	PPI
MS.gene031591	MS.gene39262	PPI
MS.gene39262	MS.gene40982	PPI
MS.gene39262	MS.gene59637	PPI
MS.gene041388	MS.gene39262	PPI
MS.gene96126	MS.gene39262	PPI
MS.gene39262	MS.gene88416	PPI
MS.gene39262	MS.gene57530	PPI
MS.gene016524	MS.gene39262	PPI
MS.gene87559	MS.gene39262	PPI
MS.gene39262	MS.gene97996	PPI
MS.gene39262	MS.gene003076	PPI
MS.gene39262	MS.gene87585	PPI
MS.gene39262	MS.gene024009	PPI
MS.gene39262	MS.gene036599	PPI
MS.gene39262	MS.gene40887	PPI
MS.gene39262	MS.gene87200	PPI
MS.gene39262	MS.gene42444	PPI
MS.gene39262	MS.gene67687	PPI
MS.gene39262	MS.gene26101	PPI
MS.gene31587	MS.gene39262	PPI
MS.gene033441	MS.gene39262	PPI
MS.gene39262	MS.gene006705	PPI
MS.gene39262	MS.gene061241	PPI
MS.gene39262	MS.gene035237	PPI
MS.gene39262	MS.gene51188	PPI
MS.gene39262	MS.gene033875	PPI
MS.gene063826	MS.gene39262	PPI
MS.gene39262	MS.gene38220	PPI
MS.gene39262	MS.gene40986	PPI
MS.gene39262	MS.gene50309	PPI
MS.gene44892	MS.gene39262	PPI
MS.gene39262	MS.gene041394	PPI
MS.gene58239	MS.gene39262	PPI
MS.gene39262	MS.gene03060	PPI
MS.gene066641	MS.gene39262	PPI
MS.gene39262	MS.gene033440	PPI
MS.gene39262	MS.gene036664	PPI
MS.gene39262	MS.gene024011	PPI
MS.gene39262	MS.gene58241	PPI
MS.gene000038	MS.gene39262	PPI
MS.gene064111	MS.gene39262	PPI
MS.gene39262	MS.gene064109	PPI
MS.gene39262	MS.gene058696	PPI
MS.gene39262	MS.gene009893	PPI
MS.gene39262	MS.gene045475	PPI
MS.gene39262	MS.gene63655	PPI
MS.gene39262	MS.gene85043	PPI
MS.gene053256	MS.gene39262	PPI
MS.gene025887	MS.gene39262	PPI
MS.gene75875	MS.gene39262	PPI
MS.gene041470	MS.gene39262	PPI
MS.gene058694	MS.gene39262	PPI
MS.gene39262	MS.gene062698	PPI
MS.gene39262	MS.gene033083	PPI
MS.gene006710	MS.gene39262	PPI
MS.gene39262	MS.gene053256	PPI
MS.gene39262	MS.gene63658	PPI
MS.gene39262	MS.gene40886	PPI
MS.gene011679	MS.gene39262	PPI
MS.gene39262	MS.gene033081	PPI
MS.gene39262	MS.gene036663	PPI
MS.gene39262	MS.gene68580	PPI
MS.gene39262	MS.gene041391	PPI
MS.gene39262	MS.gene57525	PPI
MS.gene39262	MS.gene030114	PPI
MS.gene77856	MS.gene39262	PPI
MS.gene39262	MS.gene88774	PPI
MS.gene39262	MS.gene045474	PPI
MS.gene39262	MS.gene036558	PPI
MS.gene39262	MS.gene87554	PPI
MS.gene39262	MS.gene009891	PPI
MS.gene39262	MS.gene27051	PPI
MS.gene63655	MS.gene39262	PPI
MS.gene39262	MS.gene40984	PPI
MS.gene44883	MS.gene39262	PPI
MS.gene060366	MS.gene39262	PPI
MS.gene39262	MS.gene064108	PPI
MS.gene39262	MS.gene016220	PPI
MS.gene39262	MS.gene24208	PPI
MS.gene39262	MS.gene58317	PPI
MS.gene39262	MS.gene063670	PPI
MS.gene41046	MS.gene39262	PPI
MS.gene017412	MS.gene39262	PPI
MS.gene57529	MS.gene39262	PPI
MS.gene39262	MS.gene50306	PPI
MS.gene80884	MS.gene39262	PPI
MS.gene39262	MS.gene51191	PPI
MS.gene009883	MS.gene39262	PPI
MS.gene39262	MS.gene57531	PPI
MS.gene39262	MS.gene58240	PPI
MS.gene40902	MS.gene39262	PPI
MS.gene39262	MS.gene27284	PPI
MS.gene39262	MS.gene96448	PPI
MS.gene033427	MS.gene39262	PPI
MS.gene39262	MS.gene063472	PPI
MS.gene39262	MS.gene57717	PPI
MS.gene39262	MS.gene034680	PPI
MS.gene39262	MS.gene31587	PPI
MS.gene39262	MS.gene27021	PPI
MS.gene39262	MS.gene48221	PPI
MS.gene041474	MS.gene39262	PPI
MS.gene39262	MS.gene044563	PPI
MS.gene27020	MS.gene39262	PPI
MS.gene39262	MS.gene50327	PPI
MS.gene066620	MS.gene39262	PPI
MS.gene035236	MS.gene39262	PPI
MS.gene39262	MS.gene066626	PPI
MS.gene39262	MS.gene50339	PPI
MS.gene39262	MS.gene063474	PPI
MS.gene39262	MS.gene51190	PPI
MS.gene39262	MS.gene58319	PPI
MS.gene39262	MS.gene71159	PPI
MS.gene39262	MS.gene58785	PPI
MS.gene39262	MS.gene044426	PPI
MS.gene51208	MS.gene39262	PPI
MS.gene39262	MS.gene034681	PPI
MS.gene39262	MS.gene033441	PPI
MS.gene39262	MS.gene57532	PPI
MS.gene39262	MS.gene033442	PPI
MS.gene88776	MS.gene39262	PPI
MS.gene35068	MS.gene39262	PPI
MS.gene041390	MS.gene39262	PPI
MS.gene39262	MS.gene009892	PPI
MS.gene90744	MS.gene39262	PPI
MS.gene51204	MS.gene39262	PPI
MS.gene036557	MS.gene39262	PPI
MS.gene50329	MS.gene39262	PPI
MS.gene39262	MS.gene058669	PPI
MS.gene39262	MS.gene066120	PPI
MS.gene39262	MS.gene51192	PPI
MS.gene57537	MS.gene39262	PPI
MS.gene059156	MS.gene39262	PPI
MS.gene39262	MS.gene041489	PPI
MS.gene84698	MS.gene39262	PPI
MS.gene39262	MS.gene36704	PPI
MS.gene39262	MS.gene024000	PPI
MS.gene39262	MS.gene034688	PPI
MS.gene39262	MS.gene58239	PPI
MS.gene64001	MS.gene39262	PPI
MS.gene82082	MS.gene39262	PPI
MS.gene39262	MS.gene24213	PPI
MS.gene39262	MS.gene31637	PPI
MS.gene39262	MS.gene033079	PPI
MS.gene50306	MS.gene39262	PPI
MS.gene39262	MS.gene034677	PPI
MS.gene39262	MS.gene055694	PPI
MS.gene39262	MS.gene059101	PPI
MS.gene39262	MS.gene035238	PPI
MS.gene39262	MS.gene064114	PPI
MS.gene57535	MS.gene39262	PPI
MS.gene39262	MS.gene87584	PPI
MS.gene39262	MS.gene87563	PPI
MS.gene39262	MS.gene58315	PPI
MS.gene87200	MS.gene39262	PPI
MS.gene39262	MS.gene80610	PPI
MS.gene033432	MS.gene39262	PPI
MS.gene39262	MS.gene90743	PPI
MS.gene59639	MS.gene39262	PPI
MS.gene44885	MS.gene39262	PPI
MS.gene39262	MS.gene85454	PPI
MS.gene066635	MS.gene39262	PPI
MS.gene39262	MS.gene064112	PPI
MS.gene39262	MS.gene033443	PPI
MS.gene39262	MS.gene060367	PPI
MS.gene010758	MS.gene39262	PPI
MS.gene39262	MS.gene036583	PPI
MS.gene39262	MS.gene006711	PPI
MS.gene39262	MS.gene57536	PPI
MS.gene87586	MS.gene39262	PPI
MS.gene39262	MS.gene50307	PPI
MS.gene39262	MS.gene51200	PPI
MS.gene39262	MS.gene021553	PPI
MS.gene50326	MS.gene39262	PPI
MS.gene39262	MS.gene44887	PPI
MS.gene39262	MS.gene058701	PPI
MS.gene50339	MS.gene39262	PPI
MS.gene39262	MS.gene064083	PPI
MS.gene39262	MS.gene048193	PPI
MS.gene39262	MS.gene58312	PPI
MS.gene39262	MS.gene58783	PPI
MS.gene39262	MS.gene024420	PPI
MS.gene39262	MS.gene57533	PPI
MS.gene39262	MS.gene024008	PPI
MS.gene39262	MS.gene50337	PPI
MS.gene42452	MS.gene39262	PPI
MS.gene39262	MS.gene54541	PPI
MS.gene39262	MS.gene39265	PPI
MS.gene39262	MS.gene041393	PPI
MS.gene063414	MS.gene39262	PPI
MS.gene39262	MS.gene060368	PPI
MS.gene39262	MS.gene053299	PPI
MS.gene39262	MS.gene28758	PPI
MS.gene39262	MS.gene044429	PPI
MS.gene39262	MS.gene42451	PPI
MS.gene39262	MS.gene50304	PPI
MS.gene39262	MS.gene041388	PPI
MS.gene39262	MS.gene019503	PPI
MS.gene26957	MS.gene39262	PPI
MS.gene97996	MS.gene39262	PPI
MS.gene036582	MS.gene39262	PPI
MS.gene58320	MS.gene39262	PPI
MS.gene39262	MS.gene033431	PPI
MS.gene39262	MS.gene034762	PPI
MS.gene39262	MS.gene59943	PPI
MS.gene58781	MS.gene39262	PPI
MS.gene011106	MS.gene39262	PPI
MS.gene62398	MS.gene39262	PPI
MS.gene60027	MS.gene39262	PPI
MS.gene44886	MS.gene39262	PPI
MS.gene40904	MS.gene39262	PPI
MS.gene39262	MS.gene035262	PPI
MS.gene92376	MS.gene39262	PPI
MS.gene39262	MS.gene060366	PPI
MS.gene000035	MS.gene39262	PPI
MS.gene39262	MS.gene028390	PPI
MS.gene39262	MS.gene40878	PPI
MS.gene87569	MS.gene39262	PPI
MS.gene39262	MS.gene44428	PPI
MS.gene39262	MS.gene96407	PPI
MS.gene39262	MS.gene058694	PPI
MS.gene87573	MS.gene39262	PPI
MS.gene041491	MS.gene39262	PPI
MS.gene39262	MS.gene035235	PPI
MS.gene019504	MS.gene39262	PPI
MS.gene39262	MS.gene058703	PPI
MS.gene39262	MS.gene57528	PPI
MS.gene059096	MS.gene39262	PPI
MS.gene39262	MS.gene012215	PPI
MS.gene006711	MS.gene39262	PPI
MS.gene58716	MS.gene39262	PPI
MS.gene033444	MS.gene39262	PPI
MS.gene39262	MS.gene041392	PPI
MS.gene019505	MS.gene39262	PPI
MS.gene39262	MS.gene50297	PPI
MS.gene58785	MS.gene39262	PPI
MS.gene034690	MS.gene39262	PPI
MS.gene39262	MS.gene22715	PPI
MS.gene39262	MS.gene033444	PPI
MS.gene39262	MS.gene58316	PPI
MS.gene26949	MS.gene39262	PPI
MS.gene39262	MS.gene033430	PPI
MS.gene39262	MS.gene58321	PPI
MS.gene036760	MS.gene39262	PPI
MS.gene39262	MS.gene87564	PPI
MS.gene77857	MS.gene39262	PPI
MS.gene39262	MS.gene36595	PPI
MS.gene58311	MS.gene39262	PPI
MS.gene39262	MS.gene024004	PPI
MS.gene39262	MS.gene045140	PPI
MS.gene57527	MS.gene39262	PPI
MS.gene51191	MS.gene39262	PPI
MS.gene39262	MS.gene061240	PPI
MS.gene033426	MS.gene39262	PPI
MS.gene39262	MS.gene041473	PPI
MS.gene50298	MS.gene39262	PPI
MS.gene39262	MS.gene50311	PPI
MS.gene39262	MS.gene88780	PPI
MS.gene67687	MS.gene39262	PPI
MS.gene39262	MS.gene058989	PPI
MS.gene39262	MS.gene036556	PPI
MS.gene39262	MS.gene57538	PPI
MS.gene39262	MS.gene041468	PPI
MS.gene39262	MS.gene058693	PPI
MS.gene39262	MS.gene27319	PPI
MS.gene39262	MS.gene64001	PPI
MS.gene39262	MS.gene015089	PPI
MS.gene39262	MS.gene041395	PPI
MS.gene39262	MS.gene42447	PPI
MS.gene019506	MS.gene39262	PPI
MS.gene39262	MS.gene51189	PPI
MS.gene39262	MS.gene43789	PPI
MS.gene058692	MS.gene39262	PPI
MS.gene39262	MS.gene046958	PPI
MS.gene39262	MS.gene24286	PPI
MS.gene69309	MS.gene39262	PPI
MS.gene39262	MS.gene066635	PPI
MS.gene63658	MS.gene39262	PPI
MS.gene39262	MS.gene044425	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39262.t1	MTR_1g055175	77.612	134	28	1	1	134	70	201	1.76e-68	205
MS.gene39262.t1	MTR_1g055165	77.612	134	28	1	1	134	187	318	1.93e-67	206
MS.gene39262.t1	MTR_1g055135	69.118	136	39	2	1	134	241	375	6.63e-55	176
MS.gene39262.t1	MTR_1g055195	63.433	134	46	3	1	134	348	478	3.67e-48	161
MS.gene39262.t1	MTR_1g055250	66.355	107	33	2	2	108	140	243	1.50e-41	140
MS.gene39262.t1	MTR_5g097210	60.606	132	42	4	2	130	235	359	2.47e-40	138
MS.gene39262.t1	MTR_4g118370	55.725	131	53	4	1	131	132	257	3.16e-39	132
MS.gene39262.t1	MTR_4g109280	57.353	136	52	5	1	134	228	359	6.10e-38	132
MS.gene39262.t1	MTR_4g117720	55.319	141	52	7	1	134	242	378	3.84e-37	130
MS.gene39262.t1	MTR_4g094365	50.735	136	63	3	1	134	231	364	7.39e-34	121
MS.gene39262.t1	MTR_6g060650	50.000	134	62	4	1	133	243	372	5.91e-33	119
MS.gene39262.t1	MTR_3g103020	54.015	137	56	5	1	134	246	378	1.13e-32	118
MS.gene39262.t1	MTR_4g118360	48.438	128	63	3	8	134	1	126	1.53e-32	111
MS.gene39262.t1	MTR_8g433040	48.148	135	64	3	1	134	235	364	3.34e-31	114
MS.gene39262.t1	MTR_8g032380	48.148	135	64	3	1	134	235	364	3.34e-31	114
MS.gene39262.t1	MTR_6g463430	48.889	135	62	4	1	134	74	202	3.42e-31	110
MS.gene39262.t1	MTR_4g117870	47.692	130	65	2	5	134	141	267	4.82e-31	112
MS.gene39262.t1	MTR_4g117750	52.941	119	53	3	12	130	240	355	5.61e-31	115
MS.gene39262.t1	MTR_4g117750	50.909	110	51	3	25	132	373	481	1.13e-24	97.8
MS.gene39262.t1	MTR_4g116320	50.365	137	55	5	1	131	126	255	5.84e-31	111
MS.gene39262.t1	MTR_4g116330	48.921	139	62	6	1	134	246	380	3.19e-30	112
MS.gene39262.t1	MTR_3g034180	50.746	134	60	5	1	133	360	488	6.57e-30	112
MS.gene39262.t1	MTR_4g109270	49.265	136	64	4	1	134	232	364	1.85e-29	109
MS.gene39262.t1	MTR_8g040935	50.725	138	59	5	2	134	75	208	2.02e-29	106
MS.gene39262.t1	MTR_8g433030	51.538	130	56	5	1	128	212	336	2.79e-29	108
MS.gene39262.t1	MTR_8g032390	51.538	130	56	5	1	128	245	369	7.50e-29	108
MS.gene39262.t1	MTR_4g117850	51.163	129	57	4	2	127	248	373	1.44e-28	107
MS.gene39262.t1	MTR_4g122850	46.324	136	68	4	1	134	232	364	3.14e-28	106
MS.gene39262.t1	MTR_4g023380	43.125	160	60	8	1	134	225	379	1.56e-27	104
MS.gene39262.t1	MTR_4g021785	45.588	136	66	5	1	134	226	355	1.34e-26	102
MS.gene39262.t1	MTR_4g023070	45.890	146	61	6	2	133	228	369	1.78e-26	102
MS.gene39262.t1	MTR_4g118380	51.786	112	45	3	1	104	245	355	1.94e-26	101
MS.gene39262.t1	MTR_5g070130	49.618	131	60	5	1	128	243	370	3.45e-26	101
MS.gene39262.t1	MTR_4g023130	47.794	136	61	7	1	133	184	312	7.06e-26	99.4
MS.gene39262.t1	MTR_5g070080	50.000	136	61	6	2	134	255	386	8.96e-26	100
MS.gene39262.t1	MTR_4g023080	47.794	136	61	7	1	133	225	353	1.11e-25	99.4
MS.gene39262.t1	MTR_4g117530	55.319	94	35	3	43	134	165	253	1.50e-25	97.4
MS.gene39262.t1	MTR_5g070088	46.565	131	64	5	1	128	252	379	9.17e-25	97.4
MS.gene39262.t1	MTR_4g023190	46.377	138	63	6	1	132	225	357	9.38e-25	97.1
MS.gene39262.t1	MTR_5g023000	56.250	96	34	5	43	134	8	99	1.11e-24	90.9
MS.gene39262.t1	MTR_7g079400	43.796	137	71	3	2	134	203	337	1.25e-24	96.3
MS.gene39262.t1	MTR_4g118400	48.462	130	46	6	2	128	183	294	1.73e-24	95.5
MS.gene39262.t1	MTR_4g023120	42.667	150	62	6	2	134	228	370	6.19e-24	95.1
MS.gene39262.t1	MTR_4g117780	48.214	112	55	3	24	133	256	366	7.38e-24	94.7
MS.gene39262.t1	MTR_4g117770	47.788	113	56	3	24	134	256	367	8.51e-24	94.7
MS.gene39262.t1	MTR_4g117810	47.788	113	56	3	24	134	256	367	8.51e-24	94.7
MS.gene39262.t1	MTR_4g023150	44.928	138	65	6	1	132	226	358	1.26e-23	94.0
MS.gene39262.t1	MTR_4g023090	41.060	151	66	8	1	133	240	385	3.46e-23	93.2
MS.gene39262.t1	MTR_8g102520	42.222	135	72	4	2	134	192	322	3.59e-22	89.7
MS.gene39262.t1	MTR_7g079450	40.602	133	73	3	2	134	11	137	4.53e-22	85.5
MS.gene39262.t1	MTR_4g023200	43.478	138	67	6	1	132	226	358	6.48e-22	89.4
MS.gene39262.t1	MTR_3g034160	47.015	134	65	4	1	133	246	374	6.93e-22	89.4
MS.gene39262.t1	MTR_4g116330	50.000	114	49	6	27	134	230	341	1.04e-21	88.6
MS.gene39262.t1	MTR_3g034130	45.238	126	54	5	1	120	246	362	1.37e-21	88.6
MS.gene39262.t1	MTR_7g079420	41.481	135	74	4	2	134	1013	1144	3.31e-21	88.6
MS.gene39262.t1	MTR_4g122860	43.651	126	61	4	14	133	198	319	5.01e-21	86.7
MS.gene39262.t1	MTR_4g023440	51.042	96	41	4	40	133	240	331	1.26e-20	85.5
MS.gene39262.t1	MTR_7g079370	43.182	132	64	7	2	129	227	351	3.58e-18	79.3
MS.gene39262.t1	MTR_7g117720	37.956	137	63	6	11	129	140	272	7.56e-15	69.3
MS.gene39262.t1	MTR_8g013005	55.000	60	26	1	75	134	1	59	7.80e-14	62.0
MS.gene39262.t1	MTR_4g114700	43.182	88	47	2	41	125	131	218	1.38e-13	65.5
MS.gene39262.t1	MTR_4g023100	45.455	66	32	2	69	133	56	118	8.84e-13	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 27 sgRNAs with CRISPR-Local

Find 32 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTCACAGAATCTAATTTA+TGG	0.185039	1.1:+43103491	MS.gene39262:CDS
ACAAGGGTAAAGTTGATATA+TGG	0.197793	1.1:+43103551	MS.gene39262:CDS
ATTTATCAGTCTATGGGTTT+GGG	0.253367	1.1:+43103525	MS.gene39262:CDS
TTAGAGGATTTATCAGTCTA+TGG	0.298080	1.1:+43103518	MS.gene39262:CDS
CATTCAAAATCATCGTCATT+TGG	0.304453	1.1:-43103466	None:intergenic
TTTCACAGAATCTAATTTAT+GGG	0.336216	1.1:+43103492	MS.gene39262:CDS
GATTTATCAGTCTATGGGTT+TGG	0.343864	1.1:+43103524	MS.gene39262:CDS
ATTCAAAATCATCGTCATTT+GGG	0.346028	1.1:-43103465	None:intergenic
TCTAATTTATGGGTATTTAG+AGG	0.356771	1.1:+43103502	MS.gene39262:CDS
AATACAAAGTGCAGTCATCT+TGG	0.424763	1.1:+43103584	MS.gene39262:CDS
CAAGGGTAAAGTTGATATAT+GGG	0.454916	1.1:+43103552	MS.gene39262:CDS
TTGCCTTTCATTTAATGGAA+AGG	0.488920	1.1:+43103422	None:intergenic
TAGAGGATTTATCAGTCTAT+GGG	0.499656	1.1:+43103519	MS.gene39262:CDS
TAAGCTTCCTCATTGTCACT+AGG	0.504127	1.1:-43103817	None:intergenic
GTTGGAACAGATTACCGTAC+TGG	0.514745	1.1:+43103685	MS.gene39262:CDS
TACAAGGGCAACGTTATGAA+TGG	0.537235	1.1:-43103638	None:intergenic
AAATCATCGTCATTTGGGAG+AGG	0.549721	1.1:-43103460	None:intergenic
TTATCAGTCTATGGGTTTGG+GGG	0.551494	1.1:+43103527	MS.gene39262:CDS
AAGCTTCCTCATTGTCACTA+GGG	0.552135	1.1:-43103816	None:intergenic
TTCACGAAATGAATTCCGAT+TGG	0.558524	1.1:+43103765	MS.gene39262:CDS
TTTATCAGTCTATGGGTTTG+GGG	0.570897	1.1:+43103526	MS.gene39262:CDS
GAACAGATTACCGTACTGGA+TGG	0.571251	1.1:+43103689	MS.gene39262:CDS
ACTCTGTATACATAGCCAAT+CGG	0.573189	1.1:-43103780	None:intergenic
CATATCTCACCCATCCAGTA+CGG	0.584321	1.1:-43103699	None:intergenic
AACAGATTACCGTACTGGAT+GGG	0.623237	1.1:+43103690	MS.gene39262:CDS
TTCACTCCCTAGTGACAATG+AGG	0.626833	1.1:+43103810	MS.gene39262:CDS
TGGGTGAGATATGATGACAA+AGG	0.747254	1.1:+43103709	MS.gene39262:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCACAGAATCTAATTTAT+GGG	+	chr1.1:43103492-43103511	MS.gene39262:CDS	20.0%
!	ATTCAAAATCATCGTCATTT+GGG	-	chr1.1:43103468-43103487	None:intergenic	25.0%
!	GTTTCACAGAATCTAATTTA+TGG	+	chr1.1:43103491-43103510	MS.gene39262:CDS	25.0%
!	TCTAATTTATGGGTATTTAG+AGG	+	chr1.1:43103502-43103521	MS.gene39262:CDS	25.0%
	ACAAAAAGTGGTGATATTGT+TGG	+	chr1.1:43103667-43103686	MS.gene39262:CDS	30.0%
	ATTTATCAGTCTATGGGTTT+GGG	+	chr1.1:43103525-43103544	MS.gene39262:CDS	30.0%
	CATTCAAAATCATCGTCATT+TGG	-	chr1.1:43103469-43103488	None:intergenic	30.0%
	TAGAGGATTTATCAGTCTAT+GGG	+	chr1.1:43103519-43103538	MS.gene39262:CDS	30.0%
	TTAGAGGATTTATCAGTCTA+TGG	+	chr1.1:43103518-43103537	MS.gene39262:CDS	30.0%
!	ACTTTTTGTGCAACATACAA+GGG	-	chr1.1:43103656-43103675	None:intergenic	30.0%
!!	ACAAGGGTAAAGTTGATATA+TGG	+	chr1.1:43103551-43103570	MS.gene39262:CDS	30.0%
!!	CAAGGGTAAAGTTGATATAT+GGG	+	chr1.1:43103552-43103571	MS.gene39262:CDS	30.0%
	AATACAAAGTGCAGTCATCT+TGG	+	chr1.1:43103584-43103603	MS.gene39262:CDS	35.0%
	ACTCTGTATACATAGCCAAT+CGG	-	chr1.1:43103783-43103802	None:intergenic	35.0%
	CTTGTATGTTGCACAAAAAG+TGG	+	chr1.1:43103655-43103674	MS.gene39262:CDS	35.0%
	GATTTATCAGTCTATGGGTT+TGG	+	chr1.1:43103524-43103543	MS.gene39262:CDS	35.0%
	TTCACGAAATGAATTCCGAT+TGG	+	chr1.1:43103765-43103784	MS.gene39262:CDS	35.0%
	TTTATCAGTCTATGGGTTTG+GGG	+	chr1.1:43103526-43103545	MS.gene39262:CDS	35.0%
!!	CACTTTTTGTGCAACATACA+AGG	-	chr1.1:43103657-43103676	None:intergenic	35.0%
	AAATCATCGTCATTTGGGAG+AGG	-	chr1.1:43103463-43103482	None:intergenic	40.0%
	AACAGATTACCGTACTGGAT+GGG	+	chr1.1:43103690-43103709	MS.gene39262:CDS	40.0%
	AAGCTTCCTCATTGTCACTA+GGG	-	chr1.1:43103819-43103838	None:intergenic	40.0%
	TAAGCTTCCTCATTGTCACT+AGG	-	chr1.1:43103820-43103839	None:intergenic	40.0%
	TACAAGGGCAACGTTATGAA+TGG	-	chr1.1:43103641-43103660	None:intergenic	40.0%
	TGGGTGAGATATGATGACAA+AGG	+	chr1.1:43103709-43103728	MS.gene39262:CDS	40.0%
	TTATCAGTCTATGGGTTTGG+GGG	+	chr1.1:43103527-43103546	MS.gene39262:CDS	40.0%
	CATATCTCACCCATCCAGTA+CGG	-	chr1.1:43103702-43103721	None:intergenic	45.0%
	GAACAGATTACCGTACTGGA+TGG	+	chr1.1:43103689-43103708	MS.gene39262:CDS	45.0%
	GTTGGAACAGATTACCGTAC+TGG	+	chr1.1:43103685-43103704	MS.gene39262:CDS	45.0%
	TTCACTCCCTAGTGACAATG+AGG	+	chr1.1:43103810-43103829	MS.gene39262:CDS	45.0%
!	CTATGGGTTTGGGGGTACAA+GGG	+	chr1.1:43103535-43103554	MS.gene39262:CDS	50.0%
!	TCTATGGGTTTGGGGGTACA+AGG	+	chr1.1:43103534-43103553	MS.gene39262:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	43103436	43103840	43103436	ID=MS.gene39262
chr1.1	mRNA	43103436	43103840	43103436	ID=MS.gene39262.t1;Parent=MS.gene39262
chr1.1	exon	43103436	43103840	43103436	ID=MS.gene39262.t1.exon1;Parent=MS.gene39262.t1
chr1.1	CDS	43103436	43103840	43103436	ID=cds.MS.gene39262.t1;Parent=MS.gene39262.t1

Gene Sequence

>MS.gene39262

ATGGAAAGGATACTTCTAGAAATTCCTCTCCCAAATGACGATGATTTTGAATGTAGTTTCACAGAATCTAATTTATGGGTATTTAGAGGATTTATCAGTCTATGGGTTTGGGGGTACAAGGGTAAAGTTGATATATGGGTGATGAAAGAATACAAAGTGCAGTCATCTTGGACTAAAACTCTTGTTCTTATTACTTATGATACCATTCATAACGTTGCCCTTGTATGTTGCACAAAAAGTGGTGATATTGTTGGAACAGATTACCGTACTGGATGGGTGAGATATGATGACAAAGGAGAGTTTCTAGAGCATATCTACTATTGCATAGATTCACGAAATGAATTCCGATTGGCTATGTATACAGAGTCTTTGCTTTCACTCCCTAGTGACAATGAGGAAGCTTAA

Protein sequence

>MS.gene39262.t1

MERILLEIPLPNDDDFECSFTESNLWVFRGFISLWVWGYKGKVDIWVMKEYKVQSSWTKTLVLITYDTIHNVALVCCTKSGDIVGTDYRTGWVRYDDKGEFLEHIYYCIDSRNEFRLAMYTESLLSLPSDNEEA