AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033427


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033427.t1 MTR_2g048580 57.853 382 115 11 1 378 1 340 6.43e-139 399
MS.gene033427.t1 MTR_7g079370 57.101 345 133 9 37 375 16 351 1.36e-120 353
MS.gene033427.t1 MTR_7g079420 68.727 275 48 4 105 378 905 1142 3.50e-115 361
MS.gene033427.t1 MTR_7g079400 55.882 306 109 11 78 375 45 332 1.92e-99 298
MS.gene033427.t1 MTR_8g102520 47.917 384 130 15 1 378 1 320 6.49e-92 279
MS.gene033427.t1 MTR_3g034130 43.370 362 178 11 3 352 4 350 3.70e-85 263
MS.gene033427.t1 MTR_4g109270 45.361 388 176 14 1 378 1 362 4.55e-85 263
MS.gene033427.t1 MTR_6g060650 43.909 394 182 15 1 378 1 371 2.00e-83 259
MS.gene033427.t1 MTR_3g103020 42.377 387 191 14 1 378 13 376 6.12e-83 258
MS.gene033427.t1 MTR_4g109280 45.337 386 174 16 1 378 1 357 1.07e-81 254
MS.gene033427.t1 MTR_3g034180 42.199 391 195 14 1 378 115 487 6.91e-80 253
MS.gene033427.t1 MTR_4g094365 40.933 386 196 13 1 378 1 362 4.33e-78 245
MS.gene033427.t1 MTR_4g023080 40.933 386 186 13 1 378 1 352 2.02e-77 243
MS.gene033427.t1 MTR_5g070080 40.594 404 190 15 2 378 4 384 6.85e-77 242
MS.gene033427.t1 MTR_3g034160 41.282 390 198 12 1 377 1 372 1.05e-76 241
MS.gene033427.t1 MTR_1g055135 41.207 381 196 12 7 378 12 373 6.60e-76 239
MS.gene033427.t1 MTR_4g118380 43.817 372 169 13 1 349 1 355 7.40e-75 236
MS.gene033427.t1 MTR_5g070130 41.645 389 190 14 1 374 4 370 2.43e-74 236
MS.gene033427.t1 MTR_4g116330 42.487 386 187 16 2 377 17 377 7.85e-74 234
MS.gene033427.t1 MTR_4g117770 42.640 394 181 13 1 378 1 365 9.89e-74 234
MS.gene033427.t1 MTR_4g117810 42.640 394 181 13 1 378 1 365 9.89e-74 234
MS.gene033427.t1 MTR_4g021785 39.062 384 197 11 1 378 1 353 3.78e-73 232
MS.gene033427.t1 MTR_5g070088 38.653 401 194 12 3 374 2 379 3.86e-72 230
MS.gene033427.t1 MTR_5g097210 41.842 380 193 12 2 376 3 359 1.15e-71 228
MS.gene033427.t1 MTR_4g117780 40.153 391 195 12 1 378 1 365 1.92e-71 228
MS.gene033427.t1 MTR_8g433040 40.576 382 189 15 3 378 13 362 1.13e-70 226
MS.gene033427.t1 MTR_8g032380 40.576 382 189 15 3 378 13 362 1.13e-70 226
MS.gene033427.t1 MTR_4g117850 41.114 377 187 15 7 373 22 373 3.42e-70 225
MS.gene033427.t1 MTR_4g023090 38.131 396 203 12 2 378 10 382 4.06e-70 225
MS.gene033427.t1 MTR_4g117720 41.039 385 161 16 1 375 44 372 7.19e-70 224
MS.gene033427.t1 MTR_4g023070 38.579 394 191 15 8 378 3 368 7.43e-70 224
MS.gene033427.t1 MTR_4g122850 41.417 367 186 16 19 375 12 359 2.01e-68 220
MS.gene033427.t1 MTR_4g023120 38.481 395 190 15 8 378 3 368 8.24e-68 218
MS.gene033427.t1 MTR_4g023130 38.281 384 158 13 1 378 1 311 1.70e-67 216
MS.gene033427.t1 MTR_8g032390 39.947 378 178 15 3 374 35 369 9.40e-67 216
MS.gene033427.t1 MTR_4g117750 41.344 387 179 16 6 376 1 355 2.16e-66 218
MS.gene033427.t1 MTR_4g117750 38.849 139 72 5 250 378 346 481 1.54e-15 78.2
MS.gene033427.t1 MTR_4g023190 39.793 387 194 13 1 378 1 357 1.19e-64 210
MS.gene033427.t1 MTR_8g013010 44.366 284 134 11 1 281 47 309 6.75e-63 204
MS.gene033427.t1 MTR_4g023150 39.018 387 198 12 1 378 1 358 2.37e-62 204
MS.gene033427.t1 MTR_4g023440 38.918 388 162 16 2 378 7 330 8.90e-61 199
MS.gene033427.t1 MTR_4g116330 39.481 385 161 16 2 377 17 338 1.40e-60 199
MS.gene033427.t1 MTR_5g069120 54.802 177 79 1 18 193 1 177 2.40e-59 190
MS.gene033427.t1 MTR_4g023380 34.975 406 195 12 2 378 10 375 3.04e-59 196
MS.gene033427.t1 MTR_4g023200 38.501 387 200 12 1 378 1 358 2.59e-57 191
MS.gene033427.t1 MTR_8g098830 56.250 176 66 6 182 353 32 200 7.98e-53 175
MS.gene033427.t1 MTR_8g433030 37.302 378 155 18 3 374 35 336 1.66e-50 172
MS.gene033427.t1 MTR_4g121580 36.872 358 173 15 1 345 1 318 1.09e-49 172
MS.gene033427.t1 MTR_4g117870 37.179 312 137 9 69 376 7 263 2.28e-47 162
MS.gene033427.t1 MTR_4g118400 38.321 274 118 9 104 374 69 294 5.76e-46 159
MS.gene033427.t1 MTR_1g055195 38.511 309 150 12 79 377 197 475 1.21e-45 163
MS.gene033427.t1 MTR_4g118370 42.045 264 110 11 118 377 33 257 4.26e-43 150
MS.gene033427.t1 MTR_1g055165 31.818 374 187 10 7 378 9 316 3.30e-42 150
MS.gene033427.t1 MTR_1g055175 43.500 200 98 6 185 378 9 199 3.97e-42 146
MS.gene033427.t1 MTR_4g116340 39.600 250 117 9 1 244 26 247 7.30e-42 147
MS.gene033427.t1 MTR_7g079450 59.028 144 45 7 239 378 2 135 7.18e-40 138
MS.gene033427.t1 MTR_4g116320 41.364 220 117 6 160 377 46 255 2.00e-37 136
MS.gene033427.t1 MTR_4g107820 31.316 380 216 16 8 372 36 385 7.47e-36 135
MS.gene033427.t1 MTR_4g107780 31.316 380 216 16 8 372 36 385 7.47e-36 135
MS.gene033427.t1 MTR_4g107820 31.316 380 216 16 8 372 36 385 1.08e-35 135
MS.gene033427.t1 MTR_4g107780 31.759 381 213 17 8 372 36 385 1.18e-35 135
MS.gene033427.t1 MTR_1g055250 39.048 210 111 7 147 352 46 242 9.42e-34 128
MS.gene033427.t1 MTR_4g117530 35.769 260 108 9 123 378 47 251 1.34e-32 123
MS.gene033427.t1 MTR_5g022420 31.270 307 172 12 7 308 26 298 8.98e-32 124
MS.gene033427.t1 MTR_8g040935 36.816 201 112 6 185 378 14 206 4.64e-31 117
MS.gene033427.t1 MTR_6g463430 40.306 196 104 8 185 378 16 200 8.82e-31 116
MS.gene033427.t1 MTR_0115s0020 29.787 329 201 13 8 315 10 329 9.63e-31 121
MS.gene033427.t1 MTR_3g036290 29.276 304 172 11 8 305 22 288 2.12e-30 119
MS.gene033427.t1 MTR_4g133170 27.070 314 199 11 8 314 4 294 1.27e-29 118
MS.gene033427.t1 MTR_4g117430 45.033 151 53 7 113 260 11 134 8.37e-29 110
MS.gene033427.t1 MTR_0064s0160 28.857 350 210 13 4 326 38 375 9.03e-29 116
MS.gene033427.t1 MTR_4g114700 34.686 271 111 10 106 371 9 218 1.14e-28 112
MS.gene033427.t1 MTR_4g108820 32.787 305 143 14 7 308 41 286 1.88e-28 113
MS.gene033427.t1 MTR_2g021150 28.235 340 203 16 7 329 13 328 3.46e-28 114
MS.gene033427.t1 MTR_5g057710 26.384 307 190 10 8 305 46 325 8.01e-28 113
MS.gene033427.t1 MTR_3g007330 28.296 311 174 12 8 305 48 322 1.53e-27 112
MS.gene033427.t1 MTR_1g094210 28.250 400 194 18 8 372 57 398 2.21e-27 112
MS.gene033427.t1 MTR_1g097560 30.892 314 177 16 8 315 36 315 2.28e-27 111
MS.gene033427.t1 MTR_4g055060 29.677 310 183 15 8 305 30 316 7.41e-27 110
MS.gene033427.t1 MTR_3g007360 29.373 303 182 12 11 305 55 333 7.97e-27 110
MS.gene033427.t1 MTR_5g057690 27.302 315 192 13 8 317 46 328 9.04e-27 110
MS.gene033427.t1 MTR_1g094210 28.533 375 178 17 8 347 57 376 1.04e-26 110
MS.gene033427.t1 MTR_3g007410 29.703 303 181 12 11 305 55 333 1.45e-26 109
MS.gene033427.t1 MTR_5g057790 27.660 329 183 13 8 317 46 338 1.56e-26 109
MS.gene033427.t1 MTR_7g117720 39.631 217 93 11 1 209 1 187 1.57e-26 107
MS.gene033427.t1 MTR_7g117720 32.301 226 115 9 181 375 54 272 1.90e-12 67.4
MS.gene033427.t1 MTR_6g065980 31.373 306 162 17 8 305 16 281 2.95e-26 108
MS.gene033427.t1 MTR_3g014540 31.173 324 174 17 8 314 29 320 6.85e-26 107
MS.gene033427.t1 MTR_3g006670 30.655 336 196 15 8 332 49 358 1.39e-25 107
MS.gene033427.t1 MTR_1g055070 29.670 273 153 12 8 258 49 304 2.66e-25 106
MS.gene033427.t1 MTR_8g467140 32.258 310 173 15 6 305 30 312 3.37e-25 104
MS.gene033427.t1 MTR_1g050542 29.180 305 181 10 8 307 58 332 4.93e-25 105
MS.gene033427.t1 MTR_3g009240 28.302 318 166 12 8 305 36 311 1.21e-24 104
MS.gene033427.t1 MTR_3g009310 28.803 309 180 10 8 305 42 321 1.24e-24 104
MS.gene033427.t1 MTR_5g048160 28.037 321 200 10 8 304 4 317 1.31e-24 104
MS.gene033427.t1 MTR_4g061340 30.063 316 172 12 8 305 26 310 1.59e-24 103
MS.gene033427.t1 MTR_2g055970 30.105 382 222 18 6 372 209 560 2.33e-24 105
MS.gene033427.t1 MTR_5g057020 26.349 315 193 12 8 318 46 325 2.43e-24 102
MS.gene033427.t1 MTR_7g070830 26.627 338 194 11 8 305 21 344 2.52e-24 103
MS.gene033427.t1 MTR_5g011200 27.796 313 180 16 8 304 17 299 2.92e-23 100
MS.gene033427.t1 MTR_0267s0050 27.245 323 190 9 8 305 7 309 3.04e-23 100
MS.gene033427.t1 MTR_3g013740 28.660 321 179 15 8 305 44 337 3.44e-23 100
MS.gene033427.t1 MTR_7g067680 28.391 317 167 10 8 312 49 317 3.57e-23 100
MS.gene033427.t1 MTR_3g013770 31.157 337 161 16 8 314 33 328 3.88e-23 100
MS.gene033427.t1 MTR_3g014570 29.412 306 184 11 8 305 29 310 6.31e-23 99.4
MS.gene033427.t1 MTR_7g070880 26.486 370 209 14 8 329 21 375 6.38e-23 99.8
MS.gene033427.t1 MTR_7g070440 28.923 325 179 16 5 305 4 300 6.41e-23 99.4
MS.gene033427.t1 MTR_2g021155 27.457 346 213 12 11 343 39 359 6.63e-23 101
MS.gene033427.t1 MTR_2g426090 26.708 322 191 12 6 304 5 304 7.80e-23 99.4
MS.gene033427.t1 MTR_7g055930 29.661 354 186 20 1 308 6 342 1.17e-22 99.0
MS.gene033427.t1 MTR_3g007270 28.483 323 173 18 8 304 47 337 1.18e-22 99.0
MS.gene033427.t1 MTR_1g068875 25.000 304 198 7 8 304 4 284 1.20e-22 98.6
MS.gene033427.t1 MTR_5g007610 26.384 307 199 11 8 304 41 330 1.20e-22 99.0
MS.gene033427.t1 MTR_1g115160 26.733 303 189 9 6 305 20 292 1.21e-22 98.2
MS.gene033427.t1 MTR_2g028130 27.348 362 196 15 8 329 5 339 1.26e-22 99.0
MS.gene033427.t1 MTR_7g055870 30.137 365 188 22 1 315 6 353 2.27e-22 98.2
MS.gene033427.t1 MTR_2g025420 26.703 367 218 15 8 339 6 356 2.66e-22 98.2
MS.gene033427.t1 MTR_2g028140 27.246 334 183 14 8 304 5 315 2.95e-22 97.8
MS.gene033427.t1 MTR_2g425980 27.302 315 198 9 8 304 5 306 3.00e-22 97.8
MS.gene033427.t1 MTR_8g101580 30.341 323 164 17 8 308 45 328 3.29e-22 97.4
MS.gene033427.t1 MTR_2g028160 28.483 323 189 14 8 304 5 311 3.60e-22 97.4
MS.gene033427.t1 MTR_7g066000 29.023 348 211 16 6 329 23 358 3.72e-22 97.4
MS.gene033427.t1 MTR_3g011100 28.846 312 180 15 8 304 235 519 6.03e-22 97.8
MS.gene033427.t1 MTR_3g013950 26.235 324 198 9 6 305 5 311 7.26e-22 96.3
MS.gene033427.t1 MTR_2g046920 28.344 314 188 14 4 308 20 305 7.79e-22 96.3
MS.gene033427.t1 MTR_7g066100 26.225 408 245 14 4 374 7 395 8.38e-22 96.3
MS.gene033427.t1 MTR_7g091630 29.217 332 178 19 6 304 30 337 8.69e-22 96.7
MS.gene033427.t1 MTR_7g407070 27.500 320 191 13 8 305 32 332 1.02e-21 95.9
MS.gene033427.t1 MTR_1g054575 27.541 305 188 9 8 307 52 328 1.10e-21 97.1
MS.gene033427.t1 MTR_3g007430 26.214 309 183 10 11 305 46 323 1.48e-21 95.5
MS.gene033427.t1 MTR_0128s0020 28.657 335 188 13 5 314 15 323 2.19e-21 95.1
MS.gene033427.t1 MTR_4g031770 25.472 318 188 14 8 309 4 288 2.57e-21 94.4
MS.gene033427.t1 MTR_3g083010 28.012 332 182 12 8 304 6 315 2.66e-21 95.1
MS.gene033427.t1 MTR_1g097330 29.167 312 172 11 8 305 16 292 2.79e-21 95.1
MS.gene033427.t1 MTR_7g056503 27.848 316 203 12 7 308 20 324 3.56e-21 94.4
MS.gene033427.t1 MTR_1g068835 25.155 322 204 10 8 319 4 298 3.69e-21 94.4
MS.gene033427.t1 MTR_1g097490 28.346 381 218 19 8 372 49 390 3.79e-21 94.4
MS.gene033427.t1 MTR_3g006570 26.452 310 194 12 8 309 21 304 3.87e-21 94.4
MS.gene033427.t1 MTR_7g062100 28.363 342 192 13 8 324 24 337 5.17e-21 94.0
MS.gene033427.t1 MTR_0649s0020 25.307 407 232 15 8 372 11 387 6.49e-21 93.6
MS.gene033427.t1 MTR_4g109290 37.931 174 73 7 7 179 8 147 6.65e-21 89.7
MS.gene033427.t1 MTR_2g426070 28.527 319 187 15 9 304 7 307 6.67e-21 93.6
MS.gene033427.t1 MTR_5g022040 25.140 358 195 12 8 305 40 384 7.43e-21 94.4
MS.gene033427.t1 MTR_7g056290 27.095 358 182 12 8 320 22 345 8.47e-21 93.6
MS.gene033427.t1 MTR_2g029990 26.797 306 191 14 9 305 52 333 1.34e-20 92.8
MS.gene033427.t1 MTR_6g021880 28.571 371 228 18 19 372 31 381 1.65e-20 92.4
MS.gene033427.t1 MTR_2g426020 26.959 319 188 14 8 304 6 301 1.84e-20 92.4
MS.gene033427.t1 MTR_0667s0010 25.392 319 192 10 8 304 6 300 2.23e-20 92.4
MS.gene033427.t1 MTR_2g021190 27.869 305 191 14 8 305 21 303 2.24e-20 92.0
MS.gene033427.t1 MTR_3g010390 27.215 316 194 11 8 305 33 330 2.51e-20 92.0
MS.gene033427.t1 MTR_2g024110 24.642 349 221 13 8 339 4 327 2.96e-20 91.7
MS.gene033427.t1 MTR_1g056710 30.224 268 142 12 8 258 34 273 3.11e-20 91.7
MS.gene033427.t1 MTR_1g061330 22.691 379 254 9 8 373 4 356 3.35e-20 91.7
MS.gene033427.t1 MTR_1g088120 27.246 345 192 11 6 314 8 329 5.82e-20 91.3
MS.gene033427.t1 MTR_0044s0300 25.796 314 180 12 8 305 38 314 5.87e-20 90.9
MS.gene033427.t1 MTR_0128s0070 28.274 336 191 13 6 317 20 329 6.04e-20 90.9
MS.gene033427.t1 MTR_4g070550 26.154 325 192 14 8 304 5 309 6.52e-20 90.9
MS.gene033427.t1 MTR_2g028110 25.243 309 198 8 8 304 4 291 7.88e-20 90.5
MS.gene033427.t1 MTR_3g010970 27.586 319 172 14 11 314 51 325 8.74e-20 90.5
MS.gene033427.t1 MTR_3g083640 25.566 309 185 12 8 305 55 329 9.31e-20 90.5
MS.gene033427.t1 MTR_3g010430 26.168 321 183 13 8 309 36 321 9.40e-20 90.5
MS.gene033427.t1 MTR_7g066030 26.575 365 214 14 1 329 14 360 1.29e-19 90.1
MS.gene033427.t1 MTR_7g007300 26.748 329 185 16 5 318 100 387 1.35e-19 90.1
MS.gene033427.t1 MTR_3g072470 27.479 353 186 13 8 320 19 341 1.53e-19 89.7
MS.gene033427.t1 MTR_1g054725 26.221 389 232 19 7 372 19 375 1.53e-19 89.4
MS.gene033427.t1 MTR_3g036430 24.834 302 178 10 8 309 20 272 1.57e-19 89.0
MS.gene033427.t1 MTR_2g031680 25.987 304 195 9 8 304 6 286 1.64e-19 89.7
MS.gene033427.t1 MTR_2g021050 27.597 308 179 11 8 304 5 279 1.77e-19 89.4
MS.gene033427.t1 MTR_2g461450 26.888 331 198 12 6 330 16 308 2.12e-19 89.0
MS.gene033427.t1 MTR_3g436150 26.730 318 190 13 8 305 32 326 2.77e-19 89.0
MS.gene033427.t1 MTR_3g010870 26.578 301 191 10 8 305 37 310 3.03e-19 88.6
MS.gene033427.t1 MTR_5g027330 25.938 320 187 12 12 305 44 339 4.30e-19 89.0
MS.gene033427.t1 MTR_3g023930 27.760 317 172 14 8 314 34 303 4.54e-19 88.2
MS.gene033427.t1 MTR_5g027370 25.938 320 187 12 12 305 33 328 6.08e-19 88.2
MS.gene033427.t1 MTR_4g013180 25.444 338 208 11 7 318 10 329 6.23e-19 88.6
MS.gene033427.t1 MTR_3g024110 25.392 319 178 12 8 309 101 376 6.24e-19 88.2
MS.gene033427.t1 MTR_7g057270 27.273 341 190 14 8 314 26 342 6.94e-19 87.8
MS.gene033427.t1 MTR_2g078900 26.398 322 167 14 8 305 33 308 7.47e-19 87.4
MS.gene033427.t1 MTR_1g112930 26.498 317 197 13 8 317 25 312 7.67e-19 87.4
MS.gene033427.t1 MTR_7g078040 27.350 351 197 15 6 314 7 341 1.20e-18 87.4
MS.gene033427.t1 MTR_2g047832 27.356 329 192 14 4 308 25 330 1.80e-18 86.7
MS.gene033427.t1 MTR_4g118360 41.600 125 68 4 254 376 1 122 1.92e-18 80.9
MS.gene033427.t1 MTR_7g077970 29.565 345 184 15 8 314 7 330 1.98e-18 86.7
MS.gene033427.t1 MTR_2g104340 25.000 412 242 14 2 373 8 392 2.14e-18 86.3
MS.gene033427.t1 MTR_6g027910 28.395 324 198 17 11 318 12 317 2.70e-18 85.9
MS.gene033427.t1 MTR_3g030350 26.801 347 215 13 8 343 35 353 2.71e-18 85.9
MS.gene033427.t1 MTR_7g013590 29.412 306 180 14 11 305 39 319 2.72e-18 86.3
MS.gene033427.t1 MTR_3g010520 28.065 310 181 13 8 314 25 295 2.91e-18 85.5
MS.gene033427.t1 MTR_8g062660 26.911 327 182 16 2 304 16 309 2.92e-18 87.0
MS.gene033427.t1 MTR_3g010920 26.543 324 169 15 8 314 44 315 3.06e-18 85.9
MS.gene033427.t1 MTR_4g030830 24.217 351 208 12 2 321 3 326 3.63e-18 85.5
MS.gene033427.t1 MTR_2g426060 25.309 324 192 12 8 304 6 306 4.28e-18 85.5
MS.gene033427.t1 MTR_7g056390 25.852 352 194 12 8 320 18 341 4.64e-18 85.5
MS.gene033427.t1 MTR_3g036335 25.450 389 231 18 8 372 41 394 5.13e-18 85.1
MS.gene033427.t1 MTR_3g011060 26.006 323 183 14 8 305 28 319 7.23e-18 84.7
MS.gene033427.t1 MTR_2g043400 25.507 345 199 9 8 320 23 341 7.86e-18 84.7
MS.gene033427.t1 MTR_8g099460 25.294 340 211 11 6 330 3 314 8.24e-18 84.7
MS.gene033427.t1 MTR_7g028660 26.994 326 185 15 6 304 9 308 1.10e-17 84.0
MS.gene033427.t1 MTR_0760s0010 27.389 314 179 16 13 315 52 327 1.15e-17 84.3
MS.gene033427.t1 MTR_5g069760 25.688 327 199 11 6 314 4 304 1.18e-17 84.0
MS.gene033427.t1 MTR_4g129160 27.794 349 188 17 8 314 7 333 1.31e-17 83.6
MS.gene033427.t1 MTR_7g055977 26.269 335 191 11 6 314 5 309 1.51e-17 83.6
MS.gene033427.t1 MTR_5g069930 25.836 329 201 13 6 314 4 309 1.71e-17 83.6
MS.gene033427.t1 MTR_2g066200 23.529 408 247 16 2 373 6 384 1.73e-17 83.6
MS.gene033427.t1 MTR_5g022090 27.974 311 168 12 8 305 34 301 1.96e-17 83.6
MS.gene033427.t1 MTR_6g004660 28.481 316 186 15 8 305 16 309 2.19e-17 83.2
MS.gene033427.t1 MTR_0242s0060 26.923 338 190 12 6 308 7 322 2.21e-17 83.6
MS.gene033427.t1 MTR_0242s0040 26.923 338 190 12 6 308 7 322 2.21e-17 83.6
MS.gene033427.t1 MTR_5g023000 47.368 95 45 3 287 378 5 97 2.22e-17 77.4
MS.gene033427.t1 MTR_2g021252 25.084 299 185 10 11 304 50 314 2.28e-17 83.2
MS.gene033427.t1 MTR_7g055987 27.439 328 180 13 10 314 22 314 2.41e-17 82.8
MS.gene033427.t1 MTR_2g046900 28.349 321 187 17 4 308 24 317 2.44e-17 83.2
MS.gene033427.t1 MTR_3g030250 23.975 317 193 11 8 314 37 315 2.75e-17 82.8
MS.gene033427.t1 MTR_4g019990 26.409 337 180 15 6 304 4 310 2.81e-17 82.8
MS.gene033427.t1 MTR_2g046800 27.532 385 197 18 8 342 14 366 3.24e-17 82.8
MS.gene033427.t1 MTR_5g096710 25.588 340 196 16 6 315 21 333 3.37e-17 82.8
MS.gene033427.t1 MTR_2g031640 25.649 308 194 14 8 304 6 289 3.49e-17 82.8
MS.gene033427.t1 MTR_0097s0030 26.444 329 177 12 6 304 12 305 3.83e-17 82.4
MS.gene033427.t1 MTR_2g047240 26.444 329 177 12 6 304 12 305 3.83e-17 82.4
MS.gene033427.t1 MTR_7g066010 24.324 370 180 15 3 329 16 328 4.60e-17 82.0
MS.gene033427.t1 MTR_4g122860 31.500 200 88 9 190 378 157 318 4.83e-17 81.6
MS.gene033427.t1 MTR_5g096630 25.476 420 244 19 2 373 12 410 5.42e-17 82.4
MS.gene033427.t1 MTR_4g023430 48.780 82 40 1 1 80 32 113 5.97e-17 79.3
MS.gene033427.t1 MTR_6g055210 25.926 324 208 8 7 309 21 333 6.32e-17 82.4
MS.gene033427.t1 MTR_6g007135 27.990 393 226 20 8 372 26 389 6.32e-17 82.0
MS.gene033427.t1 MTR_2g025960 26.697 221 131 8 101 304 3 209 6.51e-17 80.9
MS.gene033427.t1 MTR_4g028510 26.601 406 250 20 2 373 7 398 6.57e-17 82.4
MS.gene033427.t1 MTR_7g056760 25.680 331 198 16 6 308 21 331 6.64e-17 82.0
MS.gene033427.t1 MTR_4g129190 27.059 340 194 15 4 314 2 316 7.32e-17 81.6
MS.gene033427.t1 MTR_4g030980 25.272 368 191 15 8 315 15 358 8.09e-17 82.0
MS.gene033427.t1 MTR_2g066170 21.836 403 254 16 2 371 6 380 8.84e-17 81.6
MS.gene033427.t1 MTR_8g039500 24.926 337 199 13 2 312 6 314 8.99e-17 80.9
MS.gene033427.t1 MTR_2g031720 26.480 321 179 14 8 304 6 293 9.70e-17 81.3
MS.gene033427.t1 MTR_3g011120 28.182 330 182 18 2 304 8 309 1.01e-16 81.3
MS.gene033427.t1 MTR_7g060940 28.024 339 175 14 1 305 15 318 1.13e-16 81.3
MS.gene033427.t1 MTR_1g055055 26.710 307 174 13 6 304 24 287 1.20e-16 80.5
MS.gene033427.t1 MTR_6g090180 26.087 391 233 19 2 352 41 415 1.39e-16 81.3
MS.gene033427.t1 MTR_4g031020 24.581 358 190 13 5 304 12 347 1.50e-16 81.3
MS.gene033427.t1 MTR_7g077070 24.779 339 210 12 1 305 9 336 1.68e-16 80.9
MS.gene033427.t1 MTR_5g046300 24.679 312 184 15 8 305 4 278 1.87e-16 80.1
MS.gene033427.t1 MTR_5g046290 24.679 312 184 15 8 305 4 278 1.87e-16 80.1
MS.gene033427.t1 MTR_3g030330 25.063 399 218 18 8 372 20 371 2.13e-16 80.1
MS.gene033427.t1 MTR_1g068860 23.270 318 221 8 6 319 2 300 3.75e-16 79.7
MS.gene033427.t1 MTR_2g046830 26.984 315 191 12 4 308 21 306 4.36e-16 79.7
MS.gene033427.t1 MTR_6g053260 25.868 317 190 13 8 309 337 623 4.45e-16 80.5
MS.gene033427.t1 MTR_3g006530 23.659 317 188 11 8 304 40 322 4.77e-16 79.3
MS.gene033427.t1 MTR_2g047200 27.035 344 166 16 6 305 18 320 4.80e-16 79.3
MS.gene033427.t1 MTR_5g068040 26.061 330 183 15 8 314 16 307 4.93e-16 79.3
MS.gene033427.t1 MTR_8g073550 28.502 207 116 7 7 200 29 216 5.59e-16 77.0
MS.gene033427.t1 MTR_6g034720 43.089 123 58 5 129 250 53 164 5.74e-16 76.6
MS.gene033427.t1 MTR_7g062060 24.405 336 206 12 3 305 7 327 5.97e-16 79.0
MS.gene033427.t1 MTR_4g117550 26.290 407 227 20 2 378 11 374 6.42e-16 79.0
MS.gene033427.t1 MTR_1g029650 23.582 335 198 10 1 305 1 307 7.00e-16 79.0
MS.gene033427.t1 MTR_4g028660 25.146 342 213 12 2 312 7 336 9.54e-16 78.6
MS.gene033427.t1 MTR_4g027450 25.146 342 213 12 2 312 7 336 9.54e-16 78.6
MS.gene033427.t1 MTR_0128s0010 26.019 319 198 11 8 307 21 320 9.55e-16 78.6
MS.gene033427.t1 MTR_6g053240 23.602 322 196 11 8 309 28 319 9.71e-16 78.6
MS.gene033427.t1 MTR_6g017280 24.847 326 200 13 6 308 7 310 9.74e-16 78.6
MS.gene033427.t1 MTR_2g024100 25.982 331 196 13 14 323 14 316 1.09e-15 78.2
MS.gene033427.t1 MTR_3g024150 24.262 305 190 10 11 305 38 311 1.13e-15 78.2
MS.gene033427.t1 MTR_8g064890 25.570 395 248 15 2 370 7 381 1.29e-15 78.2
MS.gene033427.t1 MTR_5g056020 26.627 338 193 15 8 305 17 339 1.32e-15 78.6
MS.gene033427.t1 MTR_6g086825 25.485 412 248 20 7 378 69 461 1.32e-15 78.6
MS.gene033427.t1 MTR_7g078860 25.549 364 189 13 3 319 4 332 1.51e-15 77.8
MS.gene033427.t1 MTR_5g010660 25.078 319 176 12 8 305 34 310 1.76e-15 78.2
MS.gene033427.t1 MTR_2g021800 24.402 418 249 16 7 375 15 414 1.82e-15 77.8
MS.gene033427.t1 MTR_3g058480 27.612 268 154 12 8 258 39 283 2.08e-15 77.0
MS.gene033427.t1 MTR_4g080200 26.821 302 180 11 8 297 3 275 2.62e-15 76.6
MS.gene033427.t1 MTR_3g030240 23.899 318 189 14 8 315 40 314 2.70e-15 77.0
MS.gene033427.t1 MTR_4g024890 25.581 344 197 15 6 321 8 320 2.77e-15 77.0
MS.gene033427.t1 MTR_4g013185 26.184 359 190 13 6 314 8 341 3.23e-15 77.0
MS.gene033427.t1 MTR_7g056820 24.804 383 215 17 8 350 7 356 3.60e-15 76.6
MS.gene033427.t1 MTR_5g009060 27.928 333 183 16 8 304 25 336 3.64e-15 76.6
MS.gene033427.t1 MTR_4g028680 24.501 351 211 13 2 315 7 340 3.88e-15 76.6
MS.gene033427.t1 MTR_7g022600 27.596 337 191 14 6 305 21 341 6.10e-15 76.3
MS.gene033427.t1 MTR_7g017130 26.667 345 201 15 1 312 11 336 6.34e-15 75.9
MS.gene033427.t1 MTR_7g017170 26.667 345 201 15 1 312 11 336 6.46e-15 75.9
MS.gene033427.t1 MTR_4g030090 26.316 323 189 15 8 304 14 313 6.49e-15 75.9
MS.gene033427.t1 MTR_4g055820 24.384 365 222 12 2 328 8 356 6.63e-15 75.5
MS.gene033427.t1 MTR_1g442850 28.354 328 181 16 7 308 4 303 6.70e-15 75.9
MS.gene033427.t1 MTR_6g013270 26.774 310 190 15 8 305 29 313 7.31e-15 75.9
MS.gene033427.t1 MTR_4g014370 23.245 413 262 15 4 373 5 405 7.75e-15 75.9
MS.gene033427.t1 MTR_0054s0090 23.188 414 244 17 7 373 16 402 8.47e-15 75.9
MS.gene033427.t1 MTR_2g047892 26.205 332 180 15 6 304 20 319 9.85e-15 75.5
MS.gene033427.t1 MTR_7g069550 26.866 402 211 24 1 350 5 375 1.00e-14 75.5
MS.gene033427.t1 MTR_2g065860 22.388 335 221 9 2 312 6 325 1.06e-14 75.1
MS.gene033427.t1 MTR_5g046260 24.252 301 169 14 8 305 4 248 1.33e-14 73.9
MS.gene033427.t1 MTR_2g026010 25.325 308 199 11 8 304 4 291 1.41e-14 75.1
MS.gene033427.t1 MTR_4g102410 26.377 345 209 18 2 312 55 388 1.59e-14 75.1
MS.gene033427.t1 MTR_4g037465 25.602 332 177 13 8 305 21 316 1.69e-14 74.7
MS.gene033427.t1 MTR_2g437110 26.044 407 227 20 6 372 20 392 2.11e-14 74.7
MS.gene033427.t1 MTR_6g016285 25.074 339 187 14 6 305 19 329 2.13e-14 74.7
MS.gene033427.t1 MTR_4g030110 24.931 361 187 14 8 333 30 341 2.21e-14 74.3
MS.gene033427.t1 MTR_2g078850 25.566 309 183 15 11 305 33 308 2.30e-14 73.9
MS.gene033427.t1 MTR_0129s0050 25.298 419 244 17 2 373 8 404 2.73e-14 74.3
MS.gene033427.t1 MTR_0464s0020 25.143 350 198 13 6 314 21 347 3.03e-14 73.9
MS.gene033427.t1 MTR_5g069390 24.331 411 253 19 1 371 19 411 3.60e-14 73.9
MS.gene033427.t1 MTR_5g008530 63.043 46 17 0 8 53 18 63 3.86e-14 67.4
MS.gene033427.t1 MTR_7g061050 27.139 339 167 15 5 305 10 306 5.29e-14 73.2
MS.gene033427.t1 MTR_3g030310 25.220 341 181 16 8 315 21 320 5.59e-14 73.2
MS.gene033427.t1 MTR_8g041270 25.604 414 246 18 2 373 9 402 9.54e-14 72.4
MS.gene033427.t1 MTR_5g057040 26.512 215 133 7 8 214 46 243 1.02e-13 73.2
MS.gene033427.t1 MTR_2g031700 25.703 249 162 9 8 254 6 233 1.02e-13 71.2
MS.gene033427.t1 MTR_7g061060 25.152 330 188 12 5 305 10 309 1.72e-13 71.6
MS.gene033427.t1 MTR_7g056797 25.697 323 206 14 6 308 21 329 1.74e-13 71.6
MS.gene033427.t1 MTR_3g437520 24.438 356 196 14 6 314 21 350 1.85e-13 72.0
MS.gene033427.t1 MTR_7g016930 27.019 322 187 19 3 304 9 302 1.88e-13 71.2
MS.gene033427.t1 MTR_2g043410 24.784 347 199 11 8 320 22 340 1.93e-13 71.6
MS.gene033427.t1 MTR_5g097330 26.202 416 237 19 2 373 10 399 1.97e-13 71.6
MS.gene033427.t1 MTR_5g037680 23.415 410 247 17 1 372 1 381 2.25e-13 71.6
MS.gene033427.t1 MTR_2g021210 25.325 308 184 14 8 305 84 355 3.53e-13 70.9
MS.gene033427.t1 MTR_0129s0070 24.272 412 252 20 2 378 11 397 4.38e-13 70.5
MS.gene033427.t1 MTR_7g078840 24.931 361 196 11 1 308 3 341 4.62e-13 70.5
MS.gene033427.t1 MTR_7g066080 27.826 345 190 16 8 314 16 339 4.74e-13 70.5
MS.gene033427.t1 MTR_1g114700 23.794 311 195 11 8 304 29 311 5.51e-13 70.1
MS.gene033427.t1 MTR_7g056003 25.364 343 197 12 10 320 17 332 6.43e-13 70.1
MS.gene033427.t1 MTR_4g028750 22.865 363 224 16 6 337 14 351 8.79e-13 69.7
MS.gene033427.t1 MTR_2g006360 26.230 305 158 14 5 305 43 284 1.03e-12 68.9
MS.gene033427.t1 MTR_5g075370 27.891 294 161 14 1 257 1 280 1.20e-12 69.7
MS.gene033427.t1 MTR_1g115185 25.526 333 196 16 7 322 38 335 1.21e-12 68.9
MS.gene033427.t1 MTR_4g013175 25.140 358 195 13 6 314 8 341 1.26e-12 69.3
MS.gene033427.t1 MTR_3g023940 27.044 318 176 14 8 305 34 315 1.29e-12 68.9
MS.gene033427.t1 MTR_7g052670 25.575 348 204 12 6 309 19 355 1.33e-12 69.3
MS.gene033427.t1 MTR_8g467670 24.457 368 213 16 7 347 13 342 1.42e-12 68.9
MS.gene033427.t1 MTR_1g071010 25.153 326 189 15 8 305 15 313 1.95e-12 68.6
MS.gene033427.t1 MTR_8g012090 25.237 317 183 13 7 305 15 295 2.02e-12 68.2
MS.gene033427.t1 MTR_3g011650 27.586 232 126 10 11 231 82 282 2.08e-12 67.4
MS.gene033427.t1 MTR_7g060960 28.190 337 168 18 6 322 30 312 2.17e-12 68.2
MS.gene033427.t1 MTR_4g033495 27.327 333 183 15 8 309 27 331 2.18e-12 68.6
MS.gene033427.t1 MTR_7g052150 26.140 329 180 16 6 305 20 314 2.19e-12 68.2
MS.gene033427.t1 MTR_3g009300 25.497 302 163 11 11 305 37 283 2.41e-12 67.8
MS.gene033427.t1 MTR_7g056200 25.836 329 168 12 5 304 20 301 2.49e-12 68.2
MS.gene033427.t1 MTR_3g030320 28.571 245 135 13 67 305 12 222 2.60e-12 67.4
MS.gene033427.t1 MTR_1g047490 23.442 337 193 12 6 319 20 314 3.11e-12 67.4
MS.gene033427.t1 MTR_7g055850 29.694 229 121 12 1 198 6 225 3.14e-12 67.0
MS.gene033427.t1 MTR_4g011660 25.989 354 175 17 6 305 17 337 3.85e-12 67.8
MS.gene033427.t1 MTR_1g055200 44.086 93 39 3 103 194 6 86 4.21e-12 62.8
MS.gene033427.t1 MTR_5g057643 26.271 236 127 9 8 226 46 251 4.27e-12 66.2
MS.gene033427.t1 MTR_3g009290 30.709 254 133 15 8 250 35 256 6.29e-12 65.9
MS.gene033427.t1 MTR_3g010870 26.339 224 141 6 8 229 37 238 6.38e-12 66.2
MS.gene033427.t1 MTR_3g464500 24.484 339 203 14 6 318 25 336 7.36e-12 66.6
MS.gene033427.t1 MTR_7g066060 25.852 352 190 17 7 314 22 346 7.95e-12 67.0
MS.gene033427.t1 MTR_3g024130 23.904 251 153 11 101 338 58 283 1.01e-11 65.9
MS.gene033427.t1 MTR_7g078050 35.115 131 67 6 6 124 4 128 1.15e-11 64.7
MS.gene033427.t1 MTR_7g061090 23.235 340 192 12 6 305 20 330 1.36e-11 65.9
MS.gene033427.t1 MTR_6g017270 23.048 269 163 9 6 253 7 252 1.49e-11 65.5
MS.gene033427.t1 MTR_7g035295 24.024 333 174 12 6 308 14 297 1.52e-11 65.9
MS.gene033427.t1 MTR_7g445750 25.926 324 197 13 6 300 21 330 1.71e-11 65.1
MS.gene033427.t1 MTR_3g024040 24.832 298 179 13 15 304 38 298 2.09e-11 65.1
MS.gene033427.t1 MTR_3g058470 29.187 209 119 10 8 199 37 233 2.56e-11 65.1
MS.gene033427.t1 MTR_7g050520 25.588 340 175 15 1 305 15 311 3.68e-11 64.7
MS.gene033427.t1 MTR_7g079160 23.784 370 208 11 1 314 1 352 4.11e-11 64.7
MS.gene033427.t1 MTR_7g056260 25.519 337 180 15 8 309 14 314 4.21e-11 63.9
MS.gene033427.t1 MTR_3g058440 24.074 270 159 12 8 258 35 277 4.22e-11 63.9
MS.gene033427.t1 MTR_2g065840 24.118 340 208 16 2 312 6 324 4.43e-11 64.3
MS.gene033427.t1 MTR_5g023570 42.453 106 55 4 7 111 36 136 4.79e-11 60.8
MS.gene033427.t1 MTR_5g094350 22.148 298 157 11 6 261 11 275 5.46e-11 63.2
MS.gene033427.t1 MTR_2g047878 26.852 324 177 16 8 314 21 301 5.73e-11 63.9
MS.gene033427.t1 MTR_4g134390 25.632 277 175 9 2 265 11 269 7.12e-11 63.5
MS.gene033427.t1 MTR_6g048140 24.316 329 181 14 8 309 39 326 7.84e-11 63.5
MS.gene033427.t1 MTR_4g024870 27.234 235 140 11 9 231 45 260 8.10e-11 63.5
MS.gene033427.t1 MTR_3g013470 25.000 320 180 12 27 318 14 301 8.24e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033427.t1 AT3G06240 27.485 342 188 12 4 305 32 353 3.06e-26 109
MS.gene033427.t1 AT4G22390 25.321 312 213 9 9 313 5 303 1.22e-24 104
MS.gene033427.t1 AT4G22390 25.321 312 213 9 9 313 5 303 1.32e-24 104
MS.gene033427.t1 AT4G12560 25.080 311 204 11 8 305 4 298 2.33e-22 98.2
MS.gene033427.t1 AT4G12560 25.080 311 204 11 8 305 4 298 2.33e-22 98.2
MS.gene033427.t1 AT4G12560 25.080 311 204 11 8 305 4 298 2.33e-22 98.2
MS.gene033427.t1 AT3G23880 26.149 348 213 13 8 341 14 331 2.37e-18 85.9
MS.gene033427.t1 AT5G49610 27.687 307 188 11 3 302 4 283 7.49e-17 81.6
MS.gene033427.t1 AT2G16810 27.519 258 163 11 7 259 40 278 7.65e-17 80.5
MS.gene033427.t1 AT3G07870 24.299 321 193 12 8 304 28 322 4.92e-15 76.6
MS.gene033427.t1 AT4G19940 23.894 339 228 10 8 335 35 354 9.36e-15 75.5
MS.gene033427.t1 AT4G19930 25.076 331 208 14 7 318 42 351 1.60e-14 75.1
MS.gene033427.t1 AT1G33530 25.478 314 175 14 6 304 95 364 2.23e-14 74.7
MS.gene033427.t1 AT1G50870 22.924 301 195 8 9 301 32 303 4.90e-14 73.6
MS.gene033427.t1 AT3G22720 23.179 302 207 10 8 303 5 287 7.41e-14 72.8
MS.gene033427.t1 AT1G11620 27.757 263 149 13 8 257 6 240 2.39e-13 71.2
MS.gene033427.t1 AT5G52610 29.545 220 128 8 8 226 2 195 1.78e-12 68.2
MS.gene033427.t1 AT5G65850 23.636 330 202 13 3 320 30 321 2.27e-12 68.2
MS.gene033427.t1 AT3G17570 24.603 252 160 8 8 256 5 229 6.65e-12 66.6
MS.gene033427.t1 AT3G52320 25.984 254 164 7 8 257 27 260 1.51e-11 65.9
MS.gene033427.t1 AT2G02030 24.211 285 170 9 2 257 33 300 2.09e-11 65.1
MS.gene033427.t1 AT3G16210 25.794 252 153 11 7 257 4 222 2.64e-11 64.7
MS.gene033427.t1 AT3G47150 50.794 63 29 1 5 65 9 71 3.14e-11 64.7
MS.gene033427.t1 AT1G53550 25.309 324 189 17 8 312 35 324 3.43e-11 64.7
MS.gene033427.t1 AT3G49980 24.514 257 166 12 8 257 5 240 5.45e-11 63.9
MS.gene033427.t1 AT3G49980 24.514 257 166 12 8 257 6 241 5.62e-11 63.9
MS.gene033427.t1 AT1G30790 24.731 279 168 11 1 259 1 257 5.93e-11 63.9
MS.gene033427.t1 AT1G12870 22.487 378 239 16 8 356 33 385 6.35e-11 63.9
MS.gene033427.t1 AT3G22730 21.311 305 186 13 11 293 9 281 7.01e-11 63.5

Find 82 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCTTTGATTTAA+AGG 0.116438 7.2:+26150279 MS.gene033427:CDS
TTTGATGTATTGGTACTTAA+TGG 0.184691 7.2:+26150367 MS.gene033427:CDS
TGTTCTGATCCTGATATTAT+AGG 0.199846 7.2:+26149845 MS.gene033427:CDS
ATGCATTAAAATCTATTGTT+AGG 0.273972 7.2:-26149769 None:intergenic
ATGTAGAGGGTTTCTATTAT+TGG 0.282829 7.2:+26149871 MS.gene033427:CDS
TCTCATTGAAAGCTAATAAC+TGG 0.288898 7.2:+26150122 MS.gene033427:CDS
TGGTGTATGGATTTCAGATA+TGG 0.327075 7.2:+26150396 MS.gene033427:CDS
TTGGTACTTAATGGACTTAT+TGG 0.335883 7.2:+26150376 MS.gene033427:CDS
TCTATACCGGCAACAGTTAT+AGG 0.343376 7.2:-26149959 None:intergenic
ATTTCCTTTATCACATCTTC+AGG 0.350571 7.2:-26149584 None:intergenic
TGGACGAAACAGTTGAGATA+TGG 0.375897 7.2:+26150416 MS.gene033427:CDS
CTGCTAGAGCACCTCTATTA+TGG 0.378058 7.2:+26150595 MS.gene033427:CDS
TTAATGGACTTATTGGTGTA+TGG 0.382670 7.2:+26150383 MS.gene033427:CDS
TAATAACTGGAAACAAATTC+AGG 0.385142 7.2:+26150135 MS.gene033427:CDS
GAGTCGGGTTGTTCTTGAAT+GGG 0.385506 7.2:+26150212 MS.gene033427:CDS
CTACATGAACCTATAATATC+AGG 0.386021 7.2:-26149854 None:intergenic
GCAAGTGCGTTTGTAAGTTA+TGG 0.386070 7.2:+26149642 MS.gene033427:CDS
GGAAATCCTGCTGAGGTTGC+CGG 0.386944 7.2:+26149601 MS.gene033427:CDS
TCTTCCTGAAGATGTGATAA+AGG 0.387148 7.2:+26149580 MS.gene033427:CDS
CTCTCTCCTATAACTGTTGC+CGG 0.391676 7.2:+26149953 MS.gene033427:CDS
TCTTGAATGGGGCTATTCAT+TGG 0.397510 7.2:+26150224 MS.gene033427:CDS
GATCTAAAATCAAAATCATC+TGG 0.416107 7.2:-26150328 None:intergenic
ACTCTGTATATACGGCCATT+TGG 0.434308 7.2:-26150642 None:intergenic
TGCATTAAAATCTATTGTTA+GGG 0.436478 7.2:-26149768 None:intergenic
GGTTTCTCTCTCGTGATAAA+CGG 0.438600 7.2:-26150621 None:intergenic
ATCGCTGTCGGCATCTATAC+CGG 0.442746 7.2:-26149972 None:intergenic
AGAGTCGGGTTGTTCTTGAA+TGG 0.443451 7.2:+26150211 MS.gene033427:CDS
ATAGTCATCATCGCATTGAT+AGG 0.460659 7.2:-26150065 None:intergenic
TGTCATTTCCTTTAAATCAA+AGG 0.465778 7.2:-26150287 None:intergenic
ATAACCCATGCCTCTACCTA+TGG 0.469515 7.2:+26149897 MS.gene033427:CDS
ACCTCACCGGCAACCTCAGC+AGG 0.477525 7.2:-26149607 None:intergenic
GAGCAGGTAATAATCTCATA+AGG 0.480467 7.2:-26150172 None:intergenic
GGTGAGACCATTTGCAGAGC+AGG 0.483051 7.2:-26150188 None:intergenic
CTAGTTTATAACTATGAGAC+TGG 0.483134 7.2:+26150247 MS.gene033427:CDS
AAGCAGAGACTCTGTATATA+CGG 0.486825 7.2:-26150650 None:intergenic
AAACAATAGTCTTGAGGAGC+CGG 0.487443 7.2:-26150487 None:intergenic
ACAAGCTGTGGTGATGTAGT+TGG 0.488736 7.2:+26150526 MS.gene033427:CDS
AATATGCAGTGCATTCATCT+TGG 0.491707 7.2:+26150449 MS.gene033427:CDS
GGACGAAACAGTTGAGATAT+GGG 0.491745 7.2:+26150417 MS.gene033427:CDS
GATATCTAGCTCACTTGACT+TGG 0.501587 7.2:+26150093 MS.gene033427:CDS
ATTATTACCTGCTCTGCAAA+TGG 0.504484 7.2:+26150181 MS.gene033427:CDS
CAAATGGTCTCACCAGAGTC+GGG 0.510709 7.2:+26150197 MS.gene033427:CDS
GCAAATGGTCTCACCAGAGT+CGG 0.514245 7.2:+26150196 MS.gene033427:CDS
TAAACTTAATCAGTGTCACT+TGG 0.517050 7.2:-26150679 None:intergenic
GATAAGCAGAATCATGATTG+AGG 0.517618 7.2:-26149793 None:intergenic
ACCGTCAACTGATGAATACT+TGG 0.519422 7.2:+26150030 MS.gene033427:CDS
AAATGTGAATTTGCAAAATG+AGG 0.531218 7.2:-26149683 None:intergenic
TCCTGCTGAGGTTGCCGGTG+AGG 0.535788 7.2:+26149606 MS.gene033427:CDS
ATATTATAGGTTCATGTAGA+GGG 0.541395 7.2:+26149858 MS.gene033427:CDS
TCTATTGTTAGGGCTTTGAA+AGG 0.544037 7.2:-26149758 None:intergenic
GAAAATCACAAGTTTATGTG+TGG 0.546212 7.2:-26149723 None:intergenic
TACCTATGGAATCCCTCCAC+TGG 0.547529 7.2:+26149911 MS.gene033427:CDS
ACCAAGTATTCATCAGTTGA+CGG 0.547623 7.2:-26150031 None:intergenic
ATAAGCAGAATCATGATTGA+GGG 0.548392 7.2:-26149792 None:intergenic
ATTCAAGAACAACCCGACTC+TGG 0.551431 7.2:-26150209 None:intergenic
GATATTATAGGTTCATGTAG+AGG 0.556458 7.2:+26149857 MS.gene033427:CDS
TTGAAGAAGTTTAATAACAA+AGG 0.560618 7.2:+26150568 MS.gene033427:CDS
ATCACGAGAGAGAAACCAAA+TGG 0.562340 7.2:+26150627 MS.gene033427:CDS
AAAATCACAAGTTTATGTGT+GGG 0.563880 7.2:-26149722 None:intergenic
CTAGGATGCTTTACAAGCTG+TGG 0.564715 7.2:+26150514 MS.gene033427:CDS
GTAGTTGGAACAGATCTTCA+AGG 0.567449 7.2:+26150541 MS.gene033427:CDS
TGGAGGGATTCCATAGGTAG+AGG 0.567966 7.2:-26149907 None:intergenic
TTTATAACTATGAGACTGGA+AGG 0.569813 7.2:+26150251 MS.gene033427:CDS
AAACTTAATCAGTGTCACTT+GGG 0.575347 7.2:-26150678 None:intergenic
TTGTTTATTGACACCAGTGG+AGG 0.581446 7.2:-26149924 None:intergenic
TGTTTATTGACACCAGTGGA+GGG 0.582868 7.2:-26149923 None:intergenic
CTTGAGAATATAATCGCTGT+CGG 0.586330 7.2:-26149984 None:intergenic
AATGCGATGATGACTATGAT+CGG 0.595836 7.2:+26150071 MS.gene033427:CDS
ATAAACGGTGACCATAATAG+AGG 0.598685 7.2:-26150606 None:intergenic
AGTCGGGTTGTTCTTGAATG+GGG 0.602618 7.2:+26150213 MS.gene033427:CDS
ACCAATACATCAAAATCTAG+AGG 0.604826 7.2:-26150358 None:intergenic
TATTTGTTTATTGACACCAG+TGG 0.609119 7.2:-26149927 None:intergenic
AAGTTTATGTGTGGGTGATG+AGG 0.617493 7.2:-26149714 None:intergenic
CACCAGTGGAGGGATTCCAT+AGG 0.621693 7.2:-26149913 None:intergenic
GATTCCATAGGTAGAGGCAT+GGG 0.623678 7.2:-26149901 None:intergenic
GGATTCCATAGGTAGAGGCA+TGG 0.625255 7.2:-26149902 None:intergenic
GCAACAGTTATAGGAGAGAG+AGG 0.625386 7.2:-26149950 None:intergenic
CAACGAAGTACAGACCTCAC+CGG 0.646998 7.2:-26149620 None:intergenic
TTATAACTATGAGACTGGAA+GGG 0.648533 7.2:+26150252 MS.gene033427:CDS
GTTGGAACAGATCTTCAAGG+TGG 0.676978 7.2:+26150544 MS.gene033427:CDS
TGATAAAGGAAATCCTGCTG+AGG 0.709194 7.2:+26149594 MS.gene033427:CDS
ATATCAGGATCAGAACAGTG+AGG 0.781425 7.2:-26149839 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCATTAAAATCTATTGTT+AGG - chr7.2:26149772-26149791 None:intergenic 20.0%
!! TGCATTAAAATCTATTGTTA+GGG - chr7.2:26149771-26149790 None:intergenic 20.0%
!! TTGAAGAAGTTTAATAACAA+AGG + chr7.2:26150568-26150587 MS.gene033427:CDS 20.0%
!!! TATATTCTCAAGTTTTTGTA+TGG + chr7.2:26149995-26150014 MS.gene033427:CDS 20.0%
!!! TATTATTGCCTTTGATTTAA+AGG + chr7.2:26150279-26150298 MS.gene033427:CDS 20.0%
! AAAATCACAAGTTTATGTGT+GGG - chr7.2:26149725-26149744 None:intergenic 25.0%
! AAATGTGAATTTGCAAAATG+AGG - chr7.2:26149686-26149705 None:intergenic 25.0%
! ATATTATAGGTTCATGTAGA+GGG + chr7.2:26149858-26149877 MS.gene033427:CDS 25.0%
! TAATAACTGGAAACAAATTC+AGG + chr7.2:26150135-26150154 MS.gene033427:CDS 25.0%
!! GATCTAAAATCAAAATCATC+TGG - chr7.2:26150331-26150350 None:intergenic 25.0%
!! TGTCATTTCCTTTAAATCAA+AGG - chr7.2:26150290-26150309 None:intergenic 25.0%
!! TTTGATGTATTGGTACTTAA+TGG + chr7.2:26150367-26150386 MS.gene033427:CDS 25.0%
!!! ATGAATACTTGGTAGTTTTA+GGG + chr7.2:26150041-26150060 MS.gene033427:CDS 25.0%
ACCAATACATCAAAATCTAG+AGG - chr7.2:26150361-26150380 None:intergenic 30.0%
ATAAGCAGAATCATGATTGA+GGG - chr7.2:26149795-26149814 None:intergenic 30.0%
ATGTAGAGGGTTTCTATTAT+TGG + chr7.2:26149871-26149890 MS.gene033427:CDS 30.0%
ATTTCCTTTATCACATCTTC+AGG - chr7.2:26149587-26149606 None:intergenic 30.0%
CTACATGAACCTATAATATC+AGG - chr7.2:26149857-26149876 None:intergenic 30.0%
CTAGTTTATAACTATGAGAC+TGG + chr7.2:26150247-26150266 MS.gene033427:CDS 30.0%
GAAAATCACAAGTTTATGTG+TGG - chr7.2:26149726-26149745 None:intergenic 30.0%
GATATTATAGGTTCATGTAG+AGG + chr7.2:26149857-26149876 MS.gene033427:CDS 30.0%
TATTTGTTTATTGACACCAG+TGG - chr7.2:26149930-26149949 None:intergenic 30.0%
TCTCATTGAAAGCTAATAAC+TGG + chr7.2:26150122-26150141 MS.gene033427:CDS 30.0%
TGTTCTGATCCTGATATTAT+AGG + chr7.2:26149845-26149864 MS.gene033427:CDS 30.0%
TTATAACTATGAGACTGGAA+GGG + chr7.2:26150252-26150271 MS.gene033427:CDS 30.0%
TTTATAACTATGAGACTGGA+AGG + chr7.2:26150251-26150270 MS.gene033427:CDS 30.0%
! AGTGAAAAACAATAGTCTTG+AGG - chr7.2:26150496-26150515 None:intergenic 30.0%
!! CAAGACTATTGTTTTTCACT+AGG + chr7.2:26150496-26150515 MS.gene033427:CDS 30.0%
!! GATGAATACTTGGTAGTTTT+AGG + chr7.2:26150040-26150059 MS.gene033427:CDS 30.0%
!! TCCTCTAGATTTTGATGTAT+TGG + chr7.2:26150357-26150376 MS.gene033427:CDS 30.0%
!! TTAATGGACTTATTGGTGTA+TGG + chr7.2:26150383-26150402 MS.gene033427:CDS 30.0%
!! TTGGTACTTAATGGACTTAT+TGG + chr7.2:26150376-26150395 MS.gene033427:CDS 30.0%
!!! TTGGACATTTTTTATGCATC+CGG + chr7.2:26150468-26150487 MS.gene033427:CDS 30.0%
AACAGTGAGGCAAAAAATCA+AGG - chr7.2:26149829-26149848 None:intergenic 35.0%
AAGCAGAGACTCTGTATATA+CGG - chr7.2:26150653-26150672 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG + chr7.2:26150449-26150468 MS.gene033427:CDS 35.0%
AATGCGATGATGACTATGAT+CGG + chr7.2:26150071-26150090 MS.gene033427:CDS 35.0%
ACCAAGTATTCATCAGTTGA+CGG - chr7.2:26150034-26150053 None:intergenic 35.0%
ATAAACGGTGACCATAATAG+AGG - chr7.2:26150609-26150628 None:intergenic 35.0%
ATTATTACCTGCTCTGCAAA+TGG + chr7.2:26150181-26150200 MS.gene033427:CDS 35.0%
CTTGAGAATATAATCGCTGT+CGG - chr7.2:26149987-26150006 None:intergenic 35.0%
GAGCAGGTAATAATCTCATA+AGG - chr7.2:26150175-26150194 None:intergenic 35.0%
GATAAGCAGAATCATGATTG+AGG - chr7.2:26149796-26149815 None:intergenic 35.0%
TCTTCCTGAAGATGTGATAA+AGG + chr7.2:26149580-26149599 MS.gene033427:CDS 35.0%
TGGTGTATGGATTTCAGATA+TGG + chr7.2:26150396-26150415 MS.gene033427:CDS 35.0%
! ATAGTCATCATCGCATTGAT+AGG - chr7.2:26150068-26150087 None:intergenic 35.0%
!! TCTATTGTTAGGGCTTTGAA+AGG - chr7.2:26149761-26149780 None:intergenic 35.0%
AAGTTTATGTGTGGGTGATG+AGG - chr7.2:26149717-26149736 None:intergenic 40.0%
ACCGTCAACTGATGAATACT+TGG + chr7.2:26150030-26150049 MS.gene033427:CDS 40.0%
ACTCTGTATATACGGCCATT+TGG - chr7.2:26150645-26150664 None:intergenic 40.0%
ATATCAGGATCAGAACAGTG+AGG - chr7.2:26149842-26149861 None:intergenic 40.0%
ATCACGAGAGAGAAACCAAA+TGG + chr7.2:26150627-26150646 MS.gene033427:CDS 40.0%
GCAAGTGCGTTTGTAAGTTA+TGG + chr7.2:26149642-26149661 MS.gene033427:CDS 40.0%
GGACGAAACAGTTGAGATAT+GGG + chr7.2:26150417-26150436 MS.gene033427:CDS 40.0%
GGTTTCTCTCTCGTGATAAA+CGG - chr7.2:26150624-26150643 None:intergenic 40.0%
GTAGTTGGAACAGATCTTCA+AGG + chr7.2:26150541-26150560 MS.gene033427:CDS 40.0%
TCTATACCGGCAACAGTTAT+AGG - chr7.2:26149962-26149981 None:intergenic 40.0%
TCTTGAATGGGGCTATTCAT+TGG + chr7.2:26150224-26150243 MS.gene033427:CDS 40.0%
TGATAAAGGAAATCCTGCTG+AGG + chr7.2:26149594-26149613 MS.gene033427:CDS 40.0%
TGGACGAAACAGTTGAGATA+TGG + chr7.2:26150416-26150435 MS.gene033427:CDS 40.0%
TGTTTATTGACACCAGTGGA+GGG - chr7.2:26149926-26149945 None:intergenic 40.0%
TTGTTTATTGACACCAGTGG+AGG - chr7.2:26149927-26149946 None:intergenic 40.0%
! AAACAATAGTCTTGAGGAGC+CGG - chr7.2:26150490-26150509 None:intergenic 40.0%
! GATATCTAGCTCACTTGACT+TGG + chr7.2:26150093-26150112 MS.gene033427:CDS 40.0%
ATAACCCATGCCTCTACCTA+TGG + chr7.2:26149897-26149916 MS.gene033427:CDS 45.0%
ATTCAAGAACAACCCGACTC+TGG - chr7.2:26150212-26150231 None:intergenic 45.0%
CTAGGATGCTTTACAAGCTG+TGG + chr7.2:26150514-26150533 MS.gene033427:CDS 45.0%
CTCTCTCCTATAACTGTTGC+CGG + chr7.2:26149953-26149972 MS.gene033427:CDS 45.0%
GCAACAGTTATAGGAGAGAG+AGG - chr7.2:26149953-26149972 None:intergenic 45.0%
GTTGGAACAGATCTTCAAGG+TGG + chr7.2:26150544-26150563 MS.gene033427:CDS 45.0%
! ACAAGCTGTGGTGATGTAGT+TGG + chr7.2:26150526-26150545 MS.gene033427:CDS 45.0%
! AGAGTCGGGTTGTTCTTGAA+TGG + chr7.2:26150211-26150230 MS.gene033427:CDS 45.0%
! AGTCGGGTTGTTCTTGAATG+GGG + chr7.2:26150213-26150232 MS.gene033427:CDS 45.0%
! CTGCTAGAGCACCTCTATTA+TGG + chr7.2:26150595-26150614 MS.gene033427:CDS 45.0%
! GAGTCGGGTTGTTCTTGAAT+GGG + chr7.2:26150212-26150231 MS.gene033427:CDS 45.0%
! GATTCCATAGGTAGAGGCAT+GGG - chr7.2:26149904-26149923 None:intergenic 45.0%
ATCGCTGTCGGCATCTATAC+CGG - chr7.2:26149975-26149994 None:intergenic 50.0%
CAAATGGTCTCACCAGAGTC+GGG + chr7.2:26150197-26150216 MS.gene033427:CDS 50.0%
CAACGAAGTACAGACCTCAC+CGG - chr7.2:26149623-26149642 None:intergenic 50.0%
GCAAATGGTCTCACCAGAGT+CGG + chr7.2:26150196-26150215 MS.gene033427:CDS 50.0%
GGATTCCATAGGTAGAGGCA+TGG - chr7.2:26149905-26149924 None:intergenic 50.0%
TACCTATGGAATCCCTCCAC+TGG + chr7.2:26149911-26149930 MS.gene033427:CDS 50.0%
TGGAGGGATTCCATAGGTAG+AGG - chr7.2:26149910-26149929 None:intergenic 50.0%
CACCAGTGGAGGGATTCCAT+AGG - chr7.2:26149916-26149935 None:intergenic 55.0%
GGAAATCCTGCTGAGGTTGC+CGG + chr7.2:26149601-26149620 MS.gene033427:CDS 55.0%
GGTGAGACCATTTGCAGAGC+AGG - chr7.2:26150191-26150210 None:intergenic 55.0%
ACCTCACCGGCAACCTCAGC+AGG - chr7.2:26149610-26149629 None:intergenic 65.0%
TCCTGCTGAGGTTGCCGGTG+AGG + chr7.2:26149606-26149625 MS.gene033427:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 26149560 26150696 26149560 ID=MS.gene033427
chr7.2 mRNA 26149560 26150696 26149560 ID=MS.gene033427.t1;Parent=MS.gene033427
chr7.2 exon 26149560 26150696 26149560 ID=MS.gene033427.t1.exon1;Parent=MS.gene033427.t1
chr7.2 CDS 26149560 26150696 26149560 ID=cds.MS.gene033427.t1;Parent=MS.gene033427.t1
Gene Sequence

>MS.gene033427

ATGGAGAAGAAGAAAGTGTATCTTCCTGAAGATGTGATAAAGGAAATCCTGCTGAGGTTGCCGGTGAGGTCTGTACTTCGTTGCAAGTGCGTTTGTAAGTTATGGCTTTCTATCATCTCTCGTCCTCATTTTGCAAATTCACATTTTCAACTTGCCTCATCACCCACACATAAACTTGTGATTTTCGAAGATTTTAATCCTTTCAAAGCCCTAACAATAGATTTTAATGCATCCCTCAATCATGATTCTGCTTATCATTCACTAAGCCTTGATTTTTTGCCTCACTGTTCTGATCCTGATATTATAGGTTCATGTAGAGGGTTTCTATTATTGGACTATAACCCATGCCTCTACCTATGGAATCCCTCCACTGGTGTCAATAAACAAATACCTCTCTCTCCTATAACTGTTGCCGGTATAGATGCCGACAGCGATTATATTCTCAAGTTTTTGTATGGCTTGACATATGAACCGTCAACTGATGAATACTTGGTAGTTTTAGGGTCCTATCAATGCGATGATGACTATGATCGGATATCTAGCTCACTTGACTTGGAGATTTTCTCATTGAAAGCTAATAACTGGAAACAAATTCAGGTTGCTTCTCACTTTCCTTATGAGATTATTACCTGCTCTGCAAATGGTCTCACCAGAGTCGGGTTGTTCTTGAATGGGGCTATTCATTGGCTAGTTTATAACTATGAGACTGGAAGGGATGTTATTATTGCCTTTGATTTAAAGGAAATGACAATGTCAGAGATAGCTCTTCCAGATGATTTTGATTTTAGATCTGTTTCTCCTCTAGATTTTGATGTATTGGTACTTAATGGACTTATTGGTGTATGGATTTCAGATATGGACGAAACAGTTGAGATATGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGACATTTTTTATGCATCCGGCTCCTCAAGACTATTGTTTTTCACTAGGATGCTTTACAAGCTGTGGTGATGTAGTTGGAACAGATCTTCAAGGTGGATTGAAGAAGTTTAATAACAAAGGACAGCTGCTAGAGCACCTCTATTATGGTCACCGTTTATCACGAGAGAGAAACCAAATGGCCGTATATACAGAGTCTCTGCTTTCACTCCCAAGTGACACTGATTAA

Protein sequence

>MS.gene033427.t1

MEKKKVYLPEDVIKEILLRLPVRSVLRCKCVCKLWLSIISRPHFANSHFQLASSPTHKLVIFEDFNPFKALTIDFNASLNHDSAYHSLSLDFLPHCSDPDIIGSCRGFLLLDYNPCLYLWNPSTGVNKQIPLSPITVAGIDADSDYILKFLYGLTYEPSTDEYLVVLGSYQCDDDYDRISSSLDLEIFSLKANNWKQIQVASHFPYEIITCSANGLTRVGLFLNGAIHWLVYNYETGRDVIIAFDLKEMTMSEIALPDDFDFRSVSPLDFDVLVLNGLIGVWISDMDETVEIWVMQEYAVHSSWTFFMHPAPQDYCFSLGCFTSCGDVVGTDLQGGLKKFNNKGQLLEHLYYGHRLSRERNQMAVYTESLLSLPSDTD