AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066120.t1 MTR_1g055165 71.658 374 49 4 8 380 1 318 0.0 512
MS.gene066120.t1 MTR_1g055135 67.277 382 93 6 14 380 11 375 2.09e-170 480
MS.gene066120.t1 MTR_5g097210 54.331 381 140 8 8 376 1 359 4.42e-128 373
MS.gene066120.t1 MTR_1g055195 60.443 316 111 8 74 380 168 478 2.14e-120 357
MS.gene066120.t1 MTR_1g055175 83.085 201 34 0 180 380 1 201 2.17e-118 342
MS.gene066120.t1 MTR_3g103020 52.208 385 140 12 15 380 19 378 1.48e-113 336
MS.gene066120.t1 MTR_4g109270 51.969 381 143 12 16 380 8 364 1.58e-112 333
MS.gene066120.t1 MTR_4g117750 53.786 383 133 9 15 379 2 358 3.27e-111 334
MS.gene066120.t1 MTR_4g117750 48.182 110 54 3 271 378 373 481 1.01e-21 96.7
MS.gene066120.t1 MTR_3g034180 48.477 394 161 10 8 379 115 488 2.93e-109 329
MS.gene066120.t1 MTR_4g117850 50.656 381 139 11 14 373 21 373 1.41e-108 323
MS.gene066120.t1 MTR_4g109280 52.742 383 134 12 15 380 7 359 1.63e-108 322
MS.gene066120.t1 MTR_4g117770 49.606 381 156 10 14 380 9 367 1.52e-105 315
MS.gene066120.t1 MTR_4g117810 49.606 381 156 10 14 380 9 367 1.52e-105 315
MS.gene066120.t1 MTR_5g070080 48.825 383 171 10 15 379 9 384 4.68e-104 312
MS.gene066120.t1 MTR_4g122850 47.297 370 162 7 27 380 12 364 1.32e-103 311
MS.gene066120.t1 MTR_4g117780 48.556 381 160 10 14 380 9 367 2.08e-103 310
MS.gene066120.t1 MTR_3g034130 49.206 378 143 11 15 366 8 362 2.75e-103 310
MS.gene066120.t1 MTR_6g060650 50.382 393 150 12 10 379 2 372 2.42e-101 305
MS.gene066120.t1 MTR_4g116330 47.792 385 166 14 10 380 17 380 3.19e-101 305
MS.gene066120.t1 MTR_4g094365 47.792 385 165 8 10 380 2 364 6.85e-101 303
MS.gene066120.t1 MTR_3g034160 47.980 396 160 10 8 379 1 374 1.88e-100 302
MS.gene066120.t1 MTR_4g023090 44.853 408 163 11 1 375 1 379 1.90e-100 303
MS.gene066120.t1 MTR_5g070088 46.402 403 158 11 12 378 3 383 6.06e-100 301
MS.gene066120.t1 MTR_4g021785 49.072 377 152 12 15 380 8 355 8.78e-98 295
MS.gene066120.t1 MTR_5g070130 47.917 384 163 12 13 377 8 373 9.13e-98 296
MS.gene066120.t1 MTR_4g023080 47.200 375 159 11 15 379 8 353 1.34e-97 295
MS.gene066120.t1 MTR_8g433040 45.501 389 163 12 8 380 9 364 8.55e-94 285
MS.gene066120.t1 MTR_8g032380 45.501 389 163 12 8 380 9 364 8.55e-94 285
MS.gene066120.t1 MTR_4g023070 45.063 395 158 14 16 379 3 369 8.72e-94 285
MS.gene066120.t1 MTR_4g117720 45.455 396 134 11 5 378 40 375 4.21e-93 284
MS.gene066120.t1 MTR_4g023380 43.301 418 160 12 1 380 1 379 1.02e-91 280
MS.gene066120.t1 MTR_4g118380 47.872 376 139 13 10 350 2 355 3.09e-91 278
MS.gene066120.t1 MTR_4g023120 43.860 399 159 13 16 380 3 370 3.69e-90 276
MS.gene066120.t1 MTR_4g118370 52.852 263 94 5 124 376 14 256 7.73e-85 258
MS.gene066120.t1 MTR_4g023190 45.238 378 164 14 15 378 9 357 7.50e-84 259
MS.gene066120.t1 MTR_4g023440 42.820 383 137 11 14 380 16 332 2.36e-82 254
MS.gene066120.t1 MTR_4g023150 44.562 377 169 15 15 378 9 358 9.86e-82 254
MS.gene066120.t1 MTR_8g032390 43.299 388 152 13 8 375 31 370 3.15e-81 253
MS.gene066120.t1 MTR_4g023200 43.836 365 159 15 30 378 24 358 5.20e-81 252
MS.gene066120.t1 MTR_4g116330 43.117 385 145 15 10 380 17 341 1.76e-78 245
MS.gene066120.t1 MTR_8g013010 48.571 280 107 8 15 280 53 309 1.12e-74 234
MS.gene066120.t1 MTR_4g023130 42.400 375 136 12 15 379 8 312 3.73e-74 233
MS.gene066120.t1 MTR_1g055250 62.562 203 59 5 167 357 49 246 7.87e-73 230
MS.gene066120.t1 MTR_8g433030 41.316 380 138 12 8 375 31 337 6.98e-69 220
MS.gene066120.t1 MTR_4g121580 41.860 387 153 16 8 370 1 339 3.64e-67 218
MS.gene066120.t1 MTR_4g118400 48.289 263 110 10 116 374 54 294 2.43e-64 207
MS.gene066120.t1 MTR_2g048580 36.800 375 199 12 10 380 2 342 3.43e-63 206
MS.gene066120.t1 MTR_4g117870 39.672 305 134 6 87 380 2 267 1.52e-62 201
MS.gene066120.t1 MTR_7g079400 43.796 274 131 8 126 380 68 337 2.17e-60 198
MS.gene066120.t1 MTR_7g079370 38.333 360 169 15 45 375 16 351 1.83e-55 186
MS.gene066120.t1 MTR_8g102520 35.079 382 166 12 15 380 7 322 8.03e-51 173
MS.gene066120.t1 MTR_8g040935 50.249 201 86 8 188 380 14 208 9.91e-48 161
MS.gene066120.t1 MTR_4g116320 46.606 221 95 7 172 377 43 255 1.93e-46 159
MS.gene066120.t1 MTR_6g463430 44.601 213 104 7 170 380 2 202 1.47e-43 150
MS.gene066120.t1 MTR_4g117530 40.562 249 90 8 148 380 47 253 1.65e-43 152
MS.gene066120.t1 MTR_4g116340 41.036 251 93 9 14 246 34 247 5.63e-39 140
MS.gene066120.t1 MTR_7g079420 38.060 268 121 11 130 380 905 1144 4.40e-37 143
MS.gene066120.t1 MTR_4g114700 36.434 258 97 8 131 370 9 217 2.09e-35 130
MS.gene066120.t1 MTR_4g117430 47.097 155 72 3 131 280 3 152 7.76e-34 123
MS.gene066120.t1 MTR_7g117720 40.000 210 77 7 15 209 9 184 5.19e-32 122
MS.gene066120.t1 MTR_7g117720 42.857 105 48 4 279 375 172 272 1.12e-14 73.9
MS.gene066120.t1 MTR_4g118360 50.382 131 54 5 256 380 1 126 6.06e-31 114
MS.gene066120.t1 MTR_4g109290 41.398 186 59 7 8 189 1 140 2.24e-30 115
MS.gene066120.t1 MTR_1g094210 26.598 391 230 11 3 372 44 398 4.41e-30 119
MS.gene066120.t1 MTR_1g068875 29.595 321 167 12 16 310 4 291 9.35e-30 118
MS.gene066120.t1 MTR_2g028140 30.226 354 160 15 16 313 5 327 2.68e-29 117
MS.gene066120.t1 MTR_1g094210 26.703 367 214 10 3 348 44 376 2.78e-29 117
MS.gene066120.t1 MTR_2g021050 29.834 362 184 15 16 346 5 327 7.78e-29 115
MS.gene066120.t1 MTR_2g028130 30.909 330 175 11 16 310 5 316 1.65e-28 115
MS.gene066120.t1 MTR_3g036290 31.373 357 196 16 13 360 19 335 4.66e-28 113
MS.gene066120.t1 MTR_5g022420 29.032 310 188 11 4 307 15 298 9.88e-28 112
MS.gene066120.t1 MTR_2g021150 30.530 321 170 13 14 309 12 304 1.08e-27 112
MS.gene066120.t1 MTR_2g021155 29.443 377 214 15 14 364 34 384 2.98e-27 114
MS.gene066120.t1 MTR_1g068835 30.124 322 165 14 16 310 4 292 3.02e-27 111
MS.gene066120.t1 MTR_4g070550 29.016 386 196 14 16 351 5 362 6.28e-27 110
MS.gene066120.t1 MTR_3g006670 30.892 314 167 16 14 305 47 332 6.79e-27 110
MS.gene066120.t1 MTR_4g055060 30.982 326 167 13 14 311 28 323 2.80e-26 108
MS.gene066120.t1 MTR_2g028110 29.973 367 185 16 16 346 4 334 3.02e-26 108
MS.gene066120.t1 MTR_5g023000 54.000 100 36 3 286 380 5 99 3.69e-26 101
MS.gene066120.t1 MTR_2g046830 28.526 312 183 11 13 309 22 308 5.37e-26 108
MS.gene066120.t1 MTR_2g426020 27.711 415 220 17 11 377 1 383 7.00e-26 108
MS.gene066120.t1 MTR_0667s0010 29.794 339 165 14 11 309 1 306 1.07e-25 107
MS.gene066120.t1 MTR_5g057790 30.599 317 165 15 16 309 46 330 1.37e-25 107
MS.gene066120.t1 MTR_5g057020 30.132 302 161 12 16 304 46 310 1.71e-25 105
MS.gene066120.t1 MTR_2g021190 30.671 313 169 14 14 305 19 304 1.73e-25 106
MS.gene066120.t1 MTR_2g031720 29.012 324 170 13 16 309 6 299 1.79e-25 106
MS.gene066120.t1 MTR_2g028160 28.571 329 184 11 16 309 5 317 1.98e-25 107
MS.gene066120.t1 MTR_3g030250 27.974 311 192 11 5 309 26 310 2.18e-25 106
MS.gene066120.t1 MTR_2g426060 27.826 345 174 15 11 311 1 314 7.60e-25 105
MS.gene066120.t1 MTR_5g057690 29.487 312 165 12 16 309 46 320 7.64e-25 104
MS.gene066120.t1 MTR_7g056290 31.402 328 185 12 16 313 22 339 8.93e-25 105
MS.gene066120.t1 MTR_2g031680 28.746 327 170 13 11 309 1 292 9.08e-25 104
MS.gene066120.t1 MTR_5g069120 39.286 196 77 8 26 197 1 178 1.08e-24 99.8
MS.gene066120.t1 MTR_7g070830 28.647 377 185 12 16 330 21 375 1.25e-24 104
MS.gene066120.t1 MTR_4g122860 30.531 226 115 7 164 380 128 320 2.37e-24 102
MS.gene066120.t1 MTR_1g068860 28.882 322 171 11 16 310 4 294 2.45e-24 103
MS.gene066120.t1 MTR_2g046920 28.479 309 187 12 13 309 21 307 2.51e-24 103
MS.gene066120.t1 MTR_4g133170 26.875 320 166 12 16 305 4 285 2.86e-24 103
MS.gene066120.t1 MTR_8g098830 39.759 166 95 4 188 351 35 197 2.97e-24 100
MS.gene066120.t1 MTR_7g070880 27.059 425 217 14 16 372 21 420 4.37e-24 103
MS.gene066120.t1 MTR_3g011100 30.625 320 173 16 14 310 233 526 5.02e-24 104
MS.gene066120.t1 MTR_2g426090 27.778 378 206 13 11 351 1 348 5.11e-24 102
MS.gene066120.t1 MTR_3g072470 28.019 414 226 14 16 372 19 417 5.52e-24 102
MS.gene066120.t1 MTR_2g047832 28.060 335 175 13 13 309 26 332 8.96e-24 102
MS.gene066120.t1 MTR_2g024110 29.114 316 168 12 16 305 4 289 1.19e-23 101
MS.gene066120.t1 MTR_1g055145 65.060 83 28 1 214 296 121 202 1.25e-23 99.8
MS.gene066120.t1 MTR_1g055145 52.252 111 37 2 19 129 36 130 3.49e-23 98.2
MS.gene066120.t1 MTR_0760s0010 30.769 299 163 14 21 306 52 319 1.37e-23 101
MS.gene066120.t1 MTR_2g025420 26.836 354 184 13 11 314 1 329 1.42e-23 101
MS.gene066120.t1 MTR_3g007330 29.904 311 176 9 14 310 46 328 1.61e-23 101
MS.gene066120.t1 MTR_6g053240 29.712 313 177 12 14 305 26 316 1.92e-23 101
MS.gene066120.t1 MTR_5g057710 30.503 318 164 16 16 309 46 330 3.57e-23 100
MS.gene066120.t1 MTR_6g065980 28.889 315 181 13 1 305 1 282 3.90e-23 99.8
MS.gene066120.t1 MTR_3g006500 27.922 308 200 10 8 309 9 300 4.27e-23 99.8
MS.gene066120.t1 MTR_2g426070 28.261 368 200 13 17 347 7 347 4.59e-23 100
MS.gene066120.t1 MTR_6g053260 30.351 313 170 12 14 305 335 620 6.85e-23 100
MS.gene066120.t1 MTR_2g031640 29.664 327 170 16 11 309 1 295 7.10e-23 99.4
MS.gene066120.t1 MTR_1g097330 29.012 324 162 15 14 309 14 297 7.13e-23 99.8
MS.gene066120.t1 MTR_4g061340 28.571 329 187 13 4 310 14 316 7.25e-23 99.0
MS.gene066120.t1 MTR_3g007410 30.303 330 171 14 19 322 55 351 8.44e-23 99.4
MS.gene066120.t1 MTR_3g014540 31.034 319 167 13 14 309 27 315 9.66e-23 99.0
MS.gene066120.t1 MTR_7g056390 31.157 337 188 12 16 319 18 343 1.09e-22 99.0
MS.gene066120.t1 MTR_3g010590 28.620 297 180 11 14 305 37 306 1.15e-22 98.6
MS.gene066120.t1 MTR_7g079450 40.288 139 79 3 242 380 3 137 1.33e-22 92.8
MS.gene066120.t1 MTR_2g425980 29.581 382 185 17 16 346 5 353 1.80e-22 98.6
MS.gene066120.t1 MTR_3g007360 28.497 386 208 17 19 373 55 403 1.84e-22 98.2
MS.gene066120.t1 MTR_2g046900 28.481 316 186 13 13 309 25 319 2.19e-22 97.8
MS.gene066120.t1 MTR_3g009310 30.284 317 172 13 14 310 40 327 2.71e-22 97.8
MS.gene066120.t1 MTR_2g078900 29.245 318 180 13 4 305 21 309 3.65e-22 96.7
MS.gene066120.t1 MTR_2g021210 32.026 306 167 13 12 305 80 356 3.75e-22 97.8
MS.gene066120.t1 MTR_8g099460 28.933 356 177 16 16 330 5 325 3.83e-22 97.4
MS.gene066120.t1 MTR_3g009240 29.904 311 167 12 14 305 34 312 4.38e-22 97.1
MS.gene066120.t1 MTR_8g062660 25.369 406 217 17 3 373 9 363 5.58e-22 98.2
MS.gene066120.t1 MTR_3g014570 30.938 320 168 15 14 310 27 316 5.62e-22 96.7
MS.gene066120.t1 MTR_1g061330 26.250 400 220 17 16 380 4 363 8.21e-22 96.3
MS.gene066120.t1 MTR_4g108820 27.922 308 151 10 14 309 40 288 8.31e-22 95.1
MS.gene066120.t1 MTR_5g011200 30.255 314 170 16 16 307 17 303 1.44e-21 95.5
MS.gene066120.t1 MTR_2g055970 28.571 322 168 14 15 309 210 496 1.44e-21 96.7
MS.gene066120.t1 MTR_8g467140 28.302 318 174 12 15 309 31 317 1.59e-21 94.7
MS.gene066120.t1 MTR_2g026010 27.187 320 181 10 16 309 4 297 1.60e-21 95.5
MS.gene066120.t1 MTR_1g055200 66.667 63 20 1 127 188 5 67 1.81e-21 88.6
MS.gene066120.t1 MTR_3g010870 30.363 303 174 13 14 305 35 311 2.30e-21 94.7
MS.gene066120.t1 MTR_3g083010 27.317 410 237 15 11 374 1 395 2.43e-21 95.1
MS.gene066120.t1 MTR_3g024110 28.763 299 182 10 14 305 99 373 3.03e-21 95.1
MS.gene066120.t1 MTR_3g023930 29.431 299 168 11 14 305 32 294 3.10e-21 94.4
MS.gene066120.t1 MTR_4g107820 26.765 340 164 14 4 309 29 317 3.12e-21 94.7
MS.gene066120.t1 MTR_4g107780 26.765 340 164 14 4 309 29 317 3.12e-21 94.7
MS.gene066120.t1 MTR_3g007430 29.299 314 160 12 19 305 46 324 3.93e-21 94.4
MS.gene066120.t1 MTR_4g107820 26.765 340 164 14 4 309 29 317 4.02e-21 94.4
MS.gene066120.t1 MTR_4g107780 26.765 340 164 14 4 309 29 317 4.55e-21 94.4
MS.gene066120.t1 MTR_1g056710 32.362 309 170 15 16 309 34 318 4.62e-21 94.0
MS.gene066120.t1 MTR_6g027910 29.592 392 209 19 19 372 12 374 5.60e-21 93.6
MS.gene066120.t1 MTR_1g114700 30.769 312 175 15 14 307 27 315 5.81e-21 94.0
MS.gene066120.t1 MTR_3g007270 28.528 326 178 16 14 310 45 344 1.11e-20 93.2
MS.gene066120.t1 MTR_5g007610 30.211 331 165 14 14 310 39 337 1.34e-20 92.8
MS.gene066120.t1 MTR_7g056003 27.704 379 223 14 18 358 17 382 1.42e-20 92.8
MS.gene066120.t1 MTR_4g031770 28.481 316 174 14 16 309 4 289 1.50e-20 92.4
MS.gene066120.t1 MTR_3g436150 31.975 319 169 18 14 305 30 327 1.55e-20 92.8
MS.gene066120.t1 MTR_4g023430 74.138 58 15 0 15 72 40 97 3.15e-20 88.6
MS.gene066120.t1 MTR_4g006270 28.109 402 204 17 16 378 4 359 3.39e-20 91.7
MS.gene066120.t1 MTR_1g097490 31.132 318 172 17 9 309 42 329 3.53e-20 91.7
MS.gene066120.t1 MTR_2g046800 29.107 347 182 18 14 318 12 336 4.90e-20 91.3
MS.gene066120.t1 MTR_3g024150 29.333 300 174 15 19 305 38 312 5.24e-20 90.9
MS.gene066120.t1 MTR_3g010390 30.063 316 192 13 14 310 31 336 6.05e-20 90.9
MS.gene066120.t1 MTR_7g007300 30.132 302 177 12 16 309 103 378 6.59e-20 91.3
MS.gene066120.t1 MTR_3g010920 27.852 298 176 9 14 305 42 306 7.77e-20 90.5
MS.gene066120.t1 MTR_8g101580 26.444 329 188 13 4 309 33 330 8.88e-20 90.5
MS.gene066120.t1 MTR_3g010970 28.767 292 177 12 19 305 51 316 9.39e-20 90.5
MS.gene066120.t1 MTR_3g013740 30.573 314 183 15 16 309 44 342 1.35e-19 90.1
MS.gene066120.t1 MTR_3g036335 28.387 310 178 14 14 305 39 322 1.57e-19 89.7
MS.gene066120.t1 MTR_3g083640 28.346 381 220 17 14 372 53 402 1.59e-19 89.7
MS.gene066120.t1 MTR_1g050542 25.849 383 226 12 14 372 56 404 1.65e-19 89.7
MS.gene066120.t1 MTR_7g407070 29.851 335 173 15 8 305 24 333 1.73e-19 89.7
MS.gene066120.t1 MTR_4g037465 29.351 385 205 14 9 349 14 375 2.02e-19 89.4
MS.gene066120.t1 MTR_3g010430 28.707 317 169 13 14 305 34 318 2.04e-19 89.7
MS.gene066120.t1 MTR_3g006530 26.142 394 221 16 14 372 38 396 2.08e-19 89.4
MS.gene066120.t1 MTR_0115s0020 25.672 409 234 17 16 375 10 397 3.66e-19 88.6
MS.gene066120.t1 MTR_1g097560 27.171 357 202 18 7 342 27 346 4.53e-19 88.2
MS.gene066120.t1 MTR_0044s0300 27.077 325 177 14 5 305 27 315 4.61e-19 88.2
MS.gene066120.t1 MTR_6g080680 25.984 381 211 14 4 344 7 356 5.46e-19 88.2
MS.gene066120.t1 MTR_3g010520 27.184 309 181 13 5 305 14 286 5.68e-19 87.8
MS.gene066120.t1 MTR_4g030830 25.485 412 241 13 8 372 1 393 7.41e-19 87.8
MS.gene066120.t1 MTR_0128s0020 28.869 336 187 14 8 313 10 323 7.92e-19 87.8
MS.gene066120.t1 MTR_3g036430 28.339 307 150 13 14 305 18 269 9.27e-19 87.0
MS.gene066120.t1 MTR_2g029990 30.255 314 163 17 17 305 52 334 9.42e-19 87.4
MS.gene066120.t1 MTR_7g056820 26.371 383 204 15 14 350 5 355 1.10e-18 87.0
MS.gene066120.t1 MTR_3g013770 29.874 318 176 14 14 309 31 323 1.38e-18 87.0
MS.gene066120.t1 MTR_1g054575 27.213 305 180 10 14 304 50 326 1.60e-18 87.8
MS.gene066120.t1 MTR_7g055977 30.117 342 164 16 8 310 1 306 3.18e-18 85.9
MS.gene066120.t1 MTR_3g006570 28.387 310 177 11 14 305 19 301 3.19e-18 85.9
MS.gene066120.t1 MTR_7g078860 25.373 335 209 10 8 313 1 323 3.62e-18 85.5
MS.gene066120.t1 MTR_2g038680 24.396 414 235 13 16 373 16 407 4.32e-18 85.5
MS.gene066120.t1 MTR_8g073550 32.683 205 103 8 14 201 28 214 6.41e-18 82.4
MS.gene066120.t1 MTR_2g104340 25.728 412 221 16 15 373 13 392 7.61e-18 84.7
MS.gene066120.t1 MTR_1g115160 27.575 301 184 10 15 307 21 295 1.04e-17 84.0
MS.gene066120.t1 MTR_6g090180 25.385 390 205 13 10 344 41 399 1.04e-17 84.7
MS.gene066120.t1 MTR_4g019990 25.061 407 246 12 11 380 1 385 1.59e-17 83.6
MS.gene066120.t1 MTR_3g030330 27.937 315 198 11 14 322 18 309 1.75e-17 83.6
MS.gene066120.t1 MTR_2g024100 26.625 323 167 12 23 305 14 306 1.75e-17 83.6
MS.gene066120.t1 MTR_5g008530 70.175 57 15 1 16 72 18 72 1.90e-17 76.6
MS.gene066120.t1 MTR_2g025960 27.982 218 114 7 128 309 5 215 1.95e-17 82.4
MS.gene066120.t1 MTR_7g077970 28.358 335 190 13 14 310 5 327 1.98e-17 83.6
MS.gene066120.t1 MTR_6g021880 27.667 300 178 10 27 305 31 312 3.42e-17 82.8
MS.gene066120.t1 MTR_0464s0020 29.619 341 195 16 16 319 23 355 4.19e-17 82.8
MS.gene066120.t1 MTR_8g046310 26.108 406 243 18 1 377 1 378 5.42e-17 82.0
MS.gene066120.t1 MTR_2g021252 26.954 371 224 15 19 375 50 387 5.98e-17 82.0
MS.gene066120.t1 MTR_1g054725 30.573 314 169 16 15 305 19 306 6.68e-17 81.6
MS.gene066120.t1 MTR_5g022040 24.862 362 196 13 16 311 40 391 8.58e-17 82.0
MS.gene066120.t1 MTR_3g058480 33.456 272 131 16 14 260 37 283 9.53e-17 80.9
MS.gene066120.t1 MTR_2g461450 28.197 305 173 11 16 305 18 291 9.96e-17 81.3
MS.gene066120.t1 MTR_7g061060 26.687 326 181 14 13 305 10 310 1.02e-16 81.3
MS.gene066120.t1 MTR_3g009260 27.848 316 171 13 12 305 34 314 1.14e-16 81.3
MS.gene066120.t1 MTR_1g055375 27.044 318 192 12 19 317 7 303 1.14e-16 80.9
MS.gene066120.t1 MTR_7g062100 28.228 333 178 14 16 315 24 328 1.30e-16 81.3
MS.gene066120.t1 MTR_7g066850 24.694 409 247 14 8 372 13 404 1.35e-16 81.3
MS.gene066120.t1 MTR_1g088120 26.786 336 194 8 15 313 9 329 1.36e-16 81.3
MS.gene066120.t1 MTR_3g030310 26.837 313 183 13 14 305 19 306 1.37e-16 80.9
MS.gene066120.t1 MTR_0242s0060 28.657 335 191 12 8 307 1 322 1.56e-16 80.9
MS.gene066120.t1 MTR_0242s0040 28.657 335 191 12 8 307 1 322 1.56e-16 80.9
MS.gene066120.t1 MTR_0128s0070 30.816 331 172 15 16 314 22 327 1.62e-16 80.9
MS.gene066120.t1 MTR_7g078040 28.655 342 201 13 8 310 1 338 1.78e-16 80.9
MS.gene066120.t1 MTR_7g057270 29.042 334 178 14 16 310 26 339 1.91e-16 80.9
MS.gene066120.t1 MTR_5g037680 26.807 332 191 11 12 309 4 317 2.68e-16 80.5
MS.gene066120.t1 MTR_4g030980 24.697 413 227 16 11 358 10 403 2.79e-16 80.5
MS.gene066120.t1 MTR_7g060940 26.935 323 182 9 16 307 22 321 3.71e-16 79.7
MS.gene066120.t1 MTR_1g442850 27.679 336 176 18 15 313 4 309 4.27e-16 79.3
MS.gene066120.t1 MTR_6g048140 27.869 305 189 10 14 305 37 323 6.44e-16 79.0
MS.gene066120.t1 MTR_7g066000 27.273 396 231 18 15 371 24 401 6.53e-16 79.0
MS.gene066120.t1 MTR_5g097680 25.114 438 233 20 8 373 9 423 7.02e-16 79.0
MS.gene066120.t1 MTR_6g004660 28.481 316 179 13 16 305 16 310 8.00e-16 78.6
MS.gene066120.t1 MTR_0054s0090 23.399 406 245 15 15 373 16 402 8.74e-16 78.6
MS.gene066120.t1 MTR_2g021800 25.197 381 195 14 15 329 15 371 8.91e-16 78.6
MS.gene066120.t1 MTR_6g086825 25.060 419 227 15 11 371 65 454 9.31e-16 79.0
MS.gene066120.t1 MTR_2g031700 28.322 286 136 14 11 264 1 249 1.59e-15 76.6
MS.gene066120.t1 MTR_1g115185 25.745 369 217 14 14 366 37 364 1.80e-15 77.8
MS.gene066120.t1 MTR_7g079640 25.606 371 229 18 4 349 1 349 1.80e-15 77.4
MS.gene066120.t1 MTR_3g013950 27.136 398 228 17 19 374 9 386 2.30e-15 77.4
MS.gene066120.t1 MTR_1g055070 27.899 276 148 12 16 260 49 304 2.35e-15 77.4
MS.gene066120.t1 MTR_2g043400 27.356 329 186 12 16 310 23 332 2.44e-15 77.4
MS.gene066120.t1 MTR_4g055820 26.371 383 201 19 1 329 1 356 2.71e-15 77.0
MS.gene066120.t1 MTR_7g055930 25.754 431 227 19 16 372 13 424 3.83e-15 77.0
MS.gene066120.t1 MTR_2g078850 26.623 308 174 11 19 305 33 309 4.27e-15 76.3
MS.gene066120.t1 MTR_2g043410 27.673 318 199 8 16 310 22 331 4.98e-15 76.6
MS.gene066120.t1 MTR_3g010620 26.374 364 213 16 14 364 34 355 5.00e-15 76.3
MS.gene066120.t1 MTR_6g013270 27.358 318 183 13 12 307 25 316 5.29e-15 76.3
MS.gene066120.t1 MTR_7g055987 27.692 325 174 13 18 313 22 314 6.03e-15 75.9
MS.gene066120.t1 MTR_4g024890 27.019 322 179 15 15 305 9 305 6.18e-15 75.9
MS.gene066120.t1 MTR_0129s0070 25.587 383 222 16 1 342 2 362 7.44e-15 75.9
MS.gene066120.t1 MTR_5g068040 27.134 328 173 11 16 313 16 307 8.90e-15 75.5
MS.gene066120.t1 MTR_0267s0050 27.119 354 205 14 19 335 9 346 8.91e-15 75.5
MS.gene066120.t1 MTR_7g055870 25.463 432 227 17 16 372 13 424 9.05e-15 75.9
MS.gene066120.t1 MTR_2g021770 28.021 389 207 18 8 342 4 373 9.14e-15 75.5
MS.gene066120.t1 MTR_4g033495 25.620 363 204 13 16 333 27 368 9.74e-15 75.9
MS.gene066120.t1 MTR_5g096710 28.660 321 175 10 16 305 23 320 1.06e-14 75.5
MS.gene066120.t1 MTR_7g066840 24.768 323 203 10 16 313 23 330 1.07e-14 75.5
MS.gene066120.t1 MTR_5g057643 30.392 204 110 8 16 204 46 232 1.12e-14 73.9
MS.gene066120.t1 MTR_6g017280 26.765 340 169 16 16 310 9 313 1.16e-14 75.1
MS.gene066120.t1 MTR_7g056760 28.743 334 186 16 9 307 15 331 1.18e-14 75.1
MS.gene066120.t1 MTR_6g461660 26.012 346 192 15 7 308 10 335 1.45e-14 75.1
MS.gene066120.t1 MTR_1g071010 25.070 355 212 15 8 328 7 341 1.50e-14 74.7
MS.gene066120.t1 MTR_5g057040 31.220 205 107 9 16 204 46 232 1.57e-14 75.9
MS.gene066120.t1 MTR_3g010870 31.064 235 128 9 14 235 35 248 1.73e-14 73.9
MS.gene066120.t1 MTR_5g096910 26.409 337 192 18 9 309 10 326 1.74e-14 74.7
MS.gene066120.t1 MTR_5g046260 26.146 371 187 17 14 372 2 297 1.76e-14 73.9
MS.gene066120.t1 MTR_1g068905 30.000 260 126 13 16 260 4 222 2.06e-14 73.6
MS.gene066120.t1 MTR_5g048160 26.426 333 185 15 16 305 4 319 2.07e-14 74.3
MS.gene066120.t1 MTR_7g050520 27.217 327 167 13 15 305 21 312 2.23e-14 74.3
MS.gene066120.t1 MTR_5g023570 36.800 125 54 5 15 137 36 137 2.75e-14 70.1
MS.gene066120.t1 MTR_4g013180 26.269 335 188 12 15 313 10 321 2.85e-14 74.3
MS.gene066120.t1 MTR_4g129190 26.269 335 180 12 16 310 6 313 3.31e-14 73.9
MS.gene066120.t1 MTR_7g061050 27.864 323 178 14 13 305 10 307 3.62e-14 73.6
MS.gene066120.t1 MTR_5g022045 25.959 339 185 13 16 311 35 350 3.72e-14 73.9
MS.gene066120.t1 MTR_5g069930 30.769 208 106 7 15 203 5 193 3.83e-14 73.6
MS.gene066120.t1 MTR_2g047892 28.125 320 180 17 16 305 22 321 6.67e-14 72.8
MS.gene066120.t1 MTR_2g047200 26.562 320 187 12 16 305 20 321 6.76e-14 72.8
MS.gene066120.t1 MTR_3g024040 25.000 292 193 7 22 310 37 305 7.71e-14 72.8
MS.gene066120.t1 MTR_7g056170 25.326 383 175 15 15 328 74 414 9.08e-14 72.8
MS.gene066120.t1 MTR_7g061090 26.140 329 197 11 15 310 21 336 9.26e-14 72.4
MS.gene066120.t1 MTR_1g055055 27.961 304 181 14 16 313 26 297 1.04e-13 72.0
MS.gene066120.t1 MTR_6g048120 27.564 312 187 12 14 305 34 326 1.07e-13 72.4
MS.gene066120.t1 MTR_6g478230 25.120 418 234 18 3 371 14 401 1.09e-13 72.4
MS.gene066120.t1 MTR_4g030090 24.611 321 190 9 17 305 15 315 1.23e-13 72.0
MS.gene066120.t1 MTR_3g058470 30.303 231 127 9 14 222 35 253 1.55e-13 71.6
MS.gene066120.t1 MTR_4g117550 23.284 408 232 15 4 373 5 369 1.58e-13 71.6
MS.gene066120.t1 MTR_3g023940 24.474 380 238 18 14 372 32 383 1.65e-13 71.6
MS.gene066120.t1 MTR_7g013590 27.679 336 173 15 19 321 39 337 1.67e-13 71.6
MS.gene066120.t1 MTR_4g011660 32.065 184 103 4 16 186 19 193 2.06e-13 71.6
MS.gene066120.t1 MTR_8g012090 26.163 344 185 17 15 329 15 318 2.10e-13 70.9
MS.gene066120.t1 MTR_3g437520 27.405 343 203 14 16 319 23 358 2.33e-13 71.6
MS.gene066120.t1 MTR_7g017130 24.779 339 186 14 16 309 18 332 2.37e-13 71.2
MS.gene066120.t1 MTR_7g017170 24.779 339 186 14 16 309 18 332 2.69e-13 71.2
MS.gene066120.t1 MTR_7g067680 28.896 308 160 16 14 305 47 311 2.84e-13 70.9
MS.gene066120.t1 MTR_7g070440 25.074 339 177 14 13 310 4 306 2.94e-13 70.9
MS.gene066120.t1 MTR_4g031020 24.318 403 231 16 16 358 15 403 3.29e-13 70.9
MS.gene066120.t1 MTR_7g062060 25.360 347 190 12 12 310 8 333 3.42e-13 70.9
MS.gene066120.t1 MTR_7g052150 27.089 347 170 14 16 316 22 331 3.54e-13 70.9
MS.gene066120.t1 MTR_8g013005 53.333 60 27 1 321 380 1 59 3.79e-13 64.3
MS.gene066120.t1 MTR_7g079160 26.077 418 208 19 15 358 7 397 3.88e-13 70.9
MS.gene066120.t1 MTR_3g096250 27.759 299 153 14 14 305 45 287 4.00e-13 70.1
MS.gene066120.t1 MTR_7g061010 26.700 397 203 17 16 354 22 388 4.20e-13 70.5
MS.gene066120.t1 MTR_7g066030 24.645 422 217 20 15 373 20 403 4.58e-13 70.5
MS.gene066120.t1 MTR_6g007135 26.752 314 191 13 16 309 26 320 4.83e-13 70.1
MS.gene066120.t1 MTR_7g050480 27.385 325 169 13 15 305 21 312 5.03e-13 70.1
MS.gene066120.t1 MTR_4g130330 27.461 386 190 21 12 344 3 351 6.06e-13 70.1
MS.gene066120.t1 MTR_5g056020 23.784 370 204 15 14 327 15 362 6.33e-13 70.5
MS.gene066120.t1 MTR_8g039500 25.000 320 189 13 15 305 11 308 6.55e-13 69.7
MS.gene066120.t1 MTR_5g027330 23.263 331 202 13 20 320 44 352 6.78e-13 70.1
MS.gene066120.t1 MTR_7g056200 25.857 321 191 11 9 310 16 308 9.28e-13 69.3
MS.gene066120.t1 MTR_7g078050 31.285 179 89 8 16 189 6 155 9.39e-13 67.8
MS.gene066120.t1 MTR_2g022000 26.005 373 201 16 15 329 15 370 9.50e-13 69.7
MS.gene066120.t1 MTR_3g030350 28.013 307 179 15 14 305 33 312 1.04e-12 69.3
MS.gene066120.t1 MTR_7g016930 25.826 333 176 16 15 312 15 311 1.07e-12 68.9
MS.gene066120.t1 MTR_6g004210 27.679 336 188 14 27 325 36 353 1.14e-12 69.3
MS.gene066120.t1 MTR_7g028660 27.405 343 182 15 15 319 10 323 1.18e-12 68.9
MS.gene066120.t1 MTR_7g056260 25.466 322 194 10 16 310 14 316 1.36e-12 68.6
MS.gene066120.t1 MTR_2g034700 26.074 326 183 15 10 305 8 305 1.48e-12 68.6
MS.gene066120.t1 MTR_4g028680 24.931 361 193 18 1 309 1 335 1.56e-12 68.9
MS.gene066120.t1 MTR_7g035295 27.273 319 164 12 16 305 16 295 1.84e-12 68.6
MS.gene066120.t1 MTR_1g112930 25.321 312 177 14 14 304 23 299 1.99e-12 68.2
MS.gene066120.t1 MTR_5g022090 24.444 315 169 12 16 306 34 303 2.04e-12 68.6
MS.gene066120.t1 MTR_7g050490 32.500 200 104 8 15 201 7 188 2.14e-12 65.9
MS.gene066120.t1 MTR_7g056503 23.724 333 192 10 15 310 20 327 2.43e-12 68.2
MS.gene066120.t1 MTR_1g015730 25.074 339 191 14 8 313 1 309 2.68e-12 68.2
MS.gene066120.t1 MTR_5g043160 28.235 340 180 17 18 307 52 377 2.94e-12 68.2
MS.gene066120.t1 MTR_4g013185 26.648 349 190 15 15 313 9 341 3.55e-12 67.8
MS.gene066120.t1 MTR_5g097350 24.747 396 220 19 25 376 25 386 3.81e-12 67.4
MS.gene066120.t1 MTR_7g056797 30.952 210 108 9 15 201 22 217 4.15e-12 67.4
MS.gene066120.t1 MTR_4g013175 27.701 361 186 14 8 313 1 341 4.79e-12 67.4
MS.gene066120.t1 MTR_2g022170 33.803 142 67 5 19 159 7 122 7.48e-12 62.8
MS.gene066120.t1 MTR_7g091630 24.047 341 202 13 15 318 31 351 8.66e-12 66.6
MS.gene066120.t1 MTR_3g058440 28.906 256 134 13 16 248 35 265 1.02e-11 65.5
MS.gene066120.t1 MTR_4g024870 26.667 255 148 8 1 235 27 262 1.42e-11 65.9
MS.gene066120.t1 MTR_6g055210 25.148 338 186 14 10 304 16 329 1.48e-11 65.9
MS.gene066120.t1 MTR_3g011650 28.926 242 125 11 12 235 72 284 1.59e-11 64.7
MS.gene066120.t1 MTR_0097s0030 25.697 323 182 11 16 307 14 309 1.76e-11 65.5
MS.gene066120.t1 MTR_2g047240 25.697 323 182 11 16 307 14 309 1.76e-11 65.5
MS.gene066120.t1 MTR_4g080200 23.967 363 210 12 16 351 3 326 2.03e-11 65.1
MS.gene066120.t1 MTR_7g055850 30.396 227 105 11 16 202 13 226 2.25e-11 64.3
MS.gene066120.t1 MTR_0134s0060 25.000 392 203 19 15 344 11 373 2.97e-11 65.1
MS.gene066120.t1 MTR_3g006300 52.000 50 24 0 7 56 21 70 3.19e-11 59.7
MS.gene066120.t1 MTR_4g028750 24.937 397 207 21 1 344 1 359 4.51e-11 64.3
MS.gene066120.t1 MTR_2g437110 27.439 328 181 16 16 310 22 325 5.85e-11 64.3
MS.gene066120.t1 MTR_1g007410 25.513 341 179 14 15 305 21 336 6.42e-11 63.9
MS.gene066120.t1 MTR_2g021950 25.526 380 199 21 15 344 15 360 6.99e-11 63.5
MS.gene066120.t1 MTR_3g009250 28.099 242 126 10 12 235 34 245 7.13e-11 62.4
MS.gene066120.t1 MTR_7g078840 24.713 348 204 11 15 313 9 347 8.25e-11 63.5
MS.gene066120.t1 MTR_3g010440 23.684 304 152 11 14 310 24 254 8.54e-11 63.2
MS.gene066120.t1 MTR_7g077070 22.857 350 207 13 3 305 4 337 8.90e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066120.t1 AT3G06240 29.369 412 225 17 9 372 26 419 2.36e-29 118
MS.gene066120.t1 AT4G12560 27.566 341 179 14 16 319 4 313 1.64e-20 92.8
MS.gene066120.t1 AT4G12560 27.566 341 179 14 16 319 4 313 1.64e-20 92.8
MS.gene066120.t1 AT4G12560 27.566 341 179 14 16 319 4 313 1.64e-20 92.8
MS.gene066120.t1 AT3G23880 26.835 395 231 16 6 376 3 363 3.87e-20 91.3
MS.gene066120.t1 AT3G07870 27.245 323 190 9 16 312 28 331 2.52e-18 86.3
MS.gene066120.t1 AT3G52320 24.149 323 208 9 14 321 25 325 5.06e-13 70.1
MS.gene066120.t1 AT1G11620 25.078 319 198 17 16 317 6 300 1.37e-12 68.9
MS.gene066120.t1 AT3G16210 25.000 256 144 8 15 259 4 222 1.63e-12 68.6
MS.gene066120.t1 AT4G22390 24.024 333 199 12 17 321 5 311 3.08e-12 67.8
MS.gene066120.t1 AT4G22390 24.024 333 199 12 17 321 5 311 3.67e-12 67.8
MS.gene066120.t1 AT1G47790 23.432 303 202 10 17 312 26 305 5.45e-12 67.0
MS.gene066120.t1 AT5G50220 25.538 325 177 14 16 330 33 302 1.01e-11 66.2
MS.gene066120.t1 AT1G12870 26.846 149 92 4 11 156 28 162 4.87e-11 64.3

Find 88 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCTACGGATTGTGGTTTA+TGG 0.210964 1.4:-47364010 MS.gene066120:CDS
TTCAGTTTCGTTTGATTACT+TGG 0.232400 1.4:-47364261 MS.gene066120:CDS
CCGGTAACCTCATTAGGATT+TGG 0.244803 1.4:+47364738 None:intergenic
TTAGAGGATTTCTAAGTCTA+TGG 0.269614 1.4:-47363983 MS.gene066120:CDS
GGCGGAGGTCGCGGAAATTA+TGG 0.270956 1.4:-47364801 MS.gene066120:CDS
ATGACGATACGGTTGATATA+TGG 0.324560 1.4:-47363950 MS.gene066120:CDS
CTTGGTCTGAAGCTTATATA+TGG 0.327845 1.4:-47364391 MS.gene066120:CDS
TGTTGTTGCATTTGATTTAG+TGG 0.338010 1.4:-47364078 MS.gene066120:CDS
ACTTAACCGGTAACCTCATT+AGG 0.342453 1.4:+47364732 None:intergenic
ACTACTTATGATACCGTTCA+TGG 0.348788 1.4:-47363876 MS.gene066120:CDS
GAAGAGTCCTTGCTACAAAA+AGG 0.349090 1.4:+47364182 None:intergenic
CGGTAACCTCATTAGGATTT+GGG 0.350087 1.4:+47364739 None:intergenic
CTCTACGGATTGTGGTTTAT+GGG 0.357070 1.4:-47364009 MS.gene066120:CDS
AAATCTATAGATCGAAATTC+AGG 0.360952 1.4:+47364539 None:intergenic
AGGTTGAAACTGTGAATTTA+CGG 0.371805 1.4:+47364589 None:intergenic
ATTTCTAAGTCTATGGGTTA+TGG 0.375932 1.4:-47363976 MS.gene066120:CDS
AAACTTAAATGTGAAGCATT+AGG 0.385926 1.4:+47364329 None:intergenic
TGTGGTTTATGGGTATTTAG+AGG 0.386481 1.4:-47363999 MS.gene066120:CDS
TATTGCAAAGATTCACGAAA+TGG 0.390999 1.4:-47363747 MS.gene066120:CDS
AGAAGATCAAAATGAGATTC+CGG 0.400161 1.4:+47364452 None:intergenic
AATACAAAGTGCAGTCATCT+TGG 0.401037 1.4:-47363917 MS.gene066120:CDS
CCAAATCCTAATGAGGTTAC+CGG 0.407232 1.4:-47364738 MS.gene066120:CDS
GTGAAGAGTGTTGGAGAGGA+AGG 0.412229 1.4:+47364569 None:intergenic
AAACTAGGTTTCAGTGGAAC+AGG 0.414275 1.4:+47364482 None:intergenic
GAGCGATAGTCAATATCATC+TGG 0.417701 1.4:+47364029 None:intergenic
TCTCATTGAGGGCTAATGAA+TGG 0.422049 1.4:-47364232 MS.gene066120:CDS
TCAGTTTCGTTTGATTACTT+GGG 0.428278 1.4:-47364260 MS.gene066120:CDS
AAACGGATAAGCGACTTAAC+CGG 0.429292 1.4:+47364719 None:intergenic
CTCATTGAGGGCTAATGAAT+GGG 0.432737 1.4:-47364231 MS.gene066120:CDS
TAAGCTTCCTCGTCGTCACT+AGG 0.442156 1.4:+47363684 None:intergenic
TGACGATACGGTTGATATAT+GGG 0.442930 1.4:-47363949 MS.gene066120:CDS
TAATGTGGCTATTCACTGGT+TGG 0.443001 1.4:-47364129 MS.gene066120:CDS
ATTAAAGACTGACTCTACTA+AGG 0.447329 1.4:+47364148 None:intergenic
TCTTTAATGTGGCTATTCAC+TGG 0.447376 1.4:-47364133 MS.gene066120:CDS
TCAAAATGAGATTCCGGAAG+TGG 0.451896 1.4:+47364458 None:intergenic
CGCGGAAATTATGGCGGAGG+TGG 0.453617 1.4:-47364792 MS.gene066120:CDS
GGAAATTATGGCGGAGGTGG+CGG 0.458979 1.4:-47364789 MS.gene066120:CDS
AAGAAGCATGGCGGAGGTCG+CGG 0.462471 1.4:-47364810 None:intergenic
ATACAAAGTGCAGTCATCTT+GGG 0.475310 1.4:-47363916 MS.gene066120:CDS
CGAGTCAACAGATGATTACT+TGG 0.478220 1.4:-47364288 MS.gene066120:CDS
TCAAATCCGTTTGTAAGTCA+TGG 0.484548 1.4:-47364697 MS.gene066120:CDS
GTTGGAACAGACTGCCGTAC+TGG 0.484921 1.4:-47363816 MS.gene066120:CDS
GGAGTAGCGGTGAAGAGTGT+TGG 0.488300 1.4:+47364560 None:intergenic
ACTTACAAACGGATTTGAAA+CGG 0.493235 1.4:+47364702 None:intergenic
GACTATCGCTCTACGGATTG+TGG 0.494045 1.4:-47364017 MS.gene066120:CDS
ATTTGGGTGATCAATTCATC+AGG 0.495902 1.4:+47364755 None:intergenic
TAGAGGATTTCTAAGTCTAT+GGG 0.497173 1.4:-47363982 MS.gene066120:CDS
CTAATTAAAGGTTCATGTAG+AGG 0.512584 1.4:-47364431 MS.gene066120:CDS
TAATTAAAGGTTCATGTAGA+GGG 0.518546 1.4:-47364430 MS.gene066120:CDS
CAGTTTCGTTTGATTACTTG+GGG 0.518563 1.4:-47364259 MS.gene066120:CDS
GATTCCGGAAGTGGAAAACT+AGG 0.521335 1.4:+47364467 None:intergenic
ATCAATTCATCAGGTAGATA+CGG 0.532311 1.4:+47364764 None:intergenic
CTTAAATGTGAAGCATTAGG+AGG 0.535227 1.4:+47364332 None:intergenic
TGTGAAGCATTAGGAGGGAA+AGG 0.535589 1.4:+47364338 None:intergenic
AGCGGTGAAGAGTGTTGGAG+AGG 0.537722 1.4:+47364565 None:intergenic
TTGCATTTGATTTAGTGGAA+AGG 0.543544 1.4:-47364073 MS.gene066120:CDS
TGTCTATGAAATCCAGTGGA+TGG 0.545801 1.4:+47364365 None:intergenic
GTCAACAGATGATTACTTGG+TGG 0.548203 1.4:-47364285 MS.gene066120:CDS
TTCACGAAATGGATTCCGAT+TGG 0.548703 1.4:-47363736 MS.gene066120:CDS
AGAAAACCATGACTTACAAA+CGG 0.552831 1.4:+47364691 None:intergenic
TATATATGGAATCCATCCAC+TGG 0.557832 1.4:-47364377 MS.gene066120:CDS
TGATATTGACTATCGCTCTA+CGG 0.565866 1.4:-47364024 MS.gene066120:CDS
TTAAAGACTGACTCTACTAA+GGG 0.567275 1.4:+47364149 None:intergenic
AAGCTTCCTCGTCGTCACTA+GGG 0.568376 1.4:+47363685 None:intergenic
CGGAGGAAGAAGCATGGCGG+AGG 0.572188 1.4:-47364816 None:intergenic
ACTCTGTATACATAGCCAAT+CGG 0.573189 1.4:+47363721 None:intergenic
TCTAAGTCTATGGGTTATGG+TGG 0.581537 1.4:-47363973 MS.gene066120:CDS
TGATCACCCAAATCCTAATG+AGG 0.585524 1.4:-47364745 MS.gene066120:CDS
AACAGACTGCCGTACTGGAT+TGG 0.592366 1.4:-47363811 MS.gene066120:CDS
GGTCGCGGAAATTATGGCGG+AGG 0.601831 1.4:-47364795 MS.gene066120:CDS
CATATCTCACCAATCCAGTA+CGG 0.605855 1.4:+47363802 None:intergenic
CTTCTTCAACTCACACTCGT+AGG 0.606578 1.4:-47364625 MS.gene066120:CDS
GGTTATGGTGGATGACGATA+CGG 0.606921 1.4:-47363961 MS.gene066120:CDS
AGCGATAGTCAATATCATCT+GGG 0.612843 1.4:+47364030 None:intergenic
TAGTCAATATCATCTGGGAG+AGG 0.613889 1.4:+47364035 None:intergenic
AGTAGAGTCAGTCTTTAATG+TGG 0.624796 1.4:-47364144 MS.gene066120:CDS
AGTGGAAAACTAGGTTTCAG+TGG 0.624922 1.4:+47364476 None:intergenic
TTAAATGTGAAGCATTAGGA+GGG 0.627505 1.4:+47364333 None:intergenic
TACAAGGGAAATGCCATGAA+CGG 0.628081 1.4:+47363863 None:intergenic
AGGTTCATTATAATCATCGT+AGG 0.630185 1.4:+47364502 None:intergenic
TCATCGTAGGTAAACAATGA+CGG 0.630499 1.4:+47364515 None:intergenic
TTGGTGAGATATGATGAGGA+AGG 0.631695 1.4:-47363792 MS.gene066120:CDS
AGATCGAAATTCAGGAGTAG+CGG 0.644050 1.4:+47364547 None:intergenic
TATTTGTCTATGAAATCCAG+TGG 0.670705 1.4:+47364361 None:intergenic
GGAGGTCGCGGAAATTATGG+CGG 0.681532 1.4:-47364798 MS.gene066120:CDS
TAATGAATGGGAAGAAATCG+TGG 0.683513 1.4:-47364219 MS.gene066120:CDS
TGGATTGGTGAGATATGATG+AGG 0.686473 1.4:-47363796 MS.gene066120:CDS
TTCACTCCCTAGTGACGACG+AGG 0.713467 1.4:-47363691 MS.gene066120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAGTTTTTTTGGTTTT+GGG - chr1.4:47364170-47364189 MS.gene066120:CDS 15.0%
!!! CATTTAAGTTTTTTTGGTTT+TGG - chr1.4:47364169-47364188 MS.gene066120:CDS 20.0%
!!! CATTTTGATCTTCTAATTAA+AGG - chr1.4:47364043-47364062 MS.gene066120:CDS 20.0%
! AAATCTATAGATCGAAATTC+AGG + chr1.4:47363950-47363969 None:intergenic 25.0%
! TAATTAAAGGTTCATGTAGA+GGG - chr1.4:47364056-47364075 MS.gene066120:CDS 25.0%
!! AAACTTAAATGTGAAGCATT+AGG + chr1.4:47364160-47364179 None:intergenic 25.0%
!!! GCTTCACATTTAAGTTTTTT+TGG - chr1.4:47364163-47364182 MS.gene066120:CDS 25.0%
ACAAAAAGTGGTGATATTGT+TGG - chr1.4:47364652-47364671 MS.gene066120:CDS 30.0%
AGAAAACCATGACTTACAAA+CGG + chr1.4:47363798-47363817 None:intergenic 30.0%
AGAAGATCAAAATGAGATTC+CGG + chr1.4:47364037-47364056 None:intergenic 30.0%
AGGTTCATTATAATCATCGT+AGG + chr1.4:47363987-47364006 None:intergenic 30.0%
AGGTTGAAACTGTGAATTTA+CGG + chr1.4:47363900-47363919 None:intergenic 30.0%
ATCAATTCATCAGGTAGATA+CGG + chr1.4:47363725-47363744 None:intergenic 30.0%
CTAATTAAAGGTTCATGTAG+AGG - chr1.4:47364055-47364074 MS.gene066120:CDS 30.0%
TAGAGGATTTCTAAGTCTAT+GGG - chr1.4:47364504-47364523 MS.gene066120:CDS 30.0%
TATTGCAAAGATTCACGAAA+TGG - chr1.4:47364739-47364758 MS.gene066120:CDS 30.0%
TATTTGTCTATGAAATCCAG+TGG + chr1.4:47364128-47364147 None:intergenic 30.0%
TCAGTTTCGTTTGATTACTT+GGG - chr1.4:47364226-47364245 MS.gene066120:CDS 30.0%
TTAGAGGATTTCTAAGTCTA+TGG - chr1.4:47364503-47364522 MS.gene066120:CDS 30.0%
TTCAGTTTCGTTTGATTACT+TGG - chr1.4:47364225-47364244 MS.gene066120:CDS 30.0%
! ACTTACAAACGGATTTGAAA+CGG + chr1.4:47363787-47363806 None:intergenic 30.0%
! ACTTTTTGTGCAACATACAA+GGG + chr1.4:47364641-47364660 None:intergenic 30.0%
! ATTAAAGACTGACTCTACTA+AGG + chr1.4:47364341-47364360 None:intergenic 30.0%
! ATTTCTAAGTCTATGGGTTA+TGG - chr1.4:47364510-47364529 MS.gene066120:CDS 30.0%
! TGTTGTTGCATTTGATTTAG+TGG - chr1.4:47364408-47364427 MS.gene066120:CDS 30.0%
! TTAAAGACTGACTCTACTAA+GGG + chr1.4:47364340-47364359 None:intergenic 30.0%
! TTAAATGTGAAGCATTAGGA+GGG + chr1.4:47364156-47364175 None:intergenic 30.0%
! TTGCATTTGATTTAGTGGAA+AGG - chr1.4:47364413-47364432 MS.gene066120:CDS 30.0%
!! GGTTTATATTTTTGCACACT+TGG - chr1.4:47364077-47364096 MS.gene066120:CDS 30.0%
AATACAAAGTGCAGTCATCT+TGG - chr1.4:47364569-47364588 MS.gene066120:CDS 35.0%
ACTACTTATGATACCGTTCA+TGG - chr1.4:47364610-47364629 MS.gene066120:CDS 35.0%
ACTCTGTATACATAGCCAAT+CGG + chr1.4:47364768-47364787 None:intergenic 35.0%
AGCGATAGTCAATATCATCT+GGG + chr1.4:47364459-47364478 None:intergenic 35.0%
AGTAGAGTCAGTCTTTAATG+TGG - chr1.4:47364342-47364361 MS.gene066120:CDS 35.0%
ATACAAAGTGCAGTCATCTT+GGG - chr1.4:47364570-47364589 MS.gene066120:CDS 35.0%
ATTTGGGTGATCAATTCATC+AGG + chr1.4:47363734-47363753 None:intergenic 35.0%
CAGTTTCGTTTGATTACTTG+GGG - chr1.4:47364227-47364246 MS.gene066120:CDS 35.0%
CTTGTATGTTGCACAAAAAG+TGG - chr1.4:47364640-47364659 MS.gene066120:CDS 35.0%
TAATGAATGGGAAGAAATCG+TGG - chr1.4:47364267-47364286 MS.gene066120:CDS 35.0%
TATATATGGAATCCATCCAC+TGG - chr1.4:47364109-47364128 MS.gene066120:CDS 35.0%
TCAAATCCGTTTGTAAGTCA+TGG - chr1.4:47363789-47363808 MS.gene066120:CDS 35.0%
TCATCGTAGGTAAACAATGA+CGG + chr1.4:47363974-47363993 None:intergenic 35.0%
TCTTTAATGTGGCTATTCAC+TGG - chr1.4:47364353-47364372 MS.gene066120:CDS 35.0%
TGTGGTTTATGGGTATTTAG+AGG - chr1.4:47364487-47364506 MS.gene066120:CDS 35.0%
! ATGACGATACGGTTGATATA+TGG - chr1.4:47364536-47364555 MS.gene066120:CDS 35.0%
! CTTAAATGTGAAGCATTAGG+AGG + chr1.4:47364157-47364176 None:intergenic 35.0%
! CTTGGTCTGAAGCTTATATA+TGG - chr1.4:47364095-47364114 MS.gene066120:CDS 35.0%
! TGACGATACGGTTGATATAT+GGG - chr1.4:47364537-47364556 MS.gene066120:CDS 35.0%
! TGATATTGACTATCGCTCTA+CGG - chr1.4:47364462-47364481 MS.gene066120:CDS 35.0%
!! CACTTTTTGTGCAACATACA+AGG + chr1.4:47364642-47364661 None:intergenic 35.0%
AAACGGATAAGCGACTTAAC+CGG + chr1.4:47363770-47363789 None:intergenic 40.0%
AAACTAGGTTTCAGTGGAAC+AGG + chr1.4:47364007-47364026 None:intergenic 40.0%
ACTTAACCGGTAACCTCATT+AGG + chr1.4:47363757-47363776 None:intergenic 40.0%
AGATCGAAATTCAGGAGTAG+CGG + chr1.4:47363942-47363961 None:intergenic 40.0%
AGTGGAAAACTAGGTTTCAG+TGG + chr1.4:47364013-47364032 None:intergenic 40.0%
CATATCTCACCAATCCAGTA+CGG + chr1.4:47364687-47364706 None:intergenic 40.0%
CCAAATCCTAATGAGGTTAC+CGG - chr1.4:47363748-47363767 MS.gene066120:CDS 40.0%
CCTTGCTACAAAAAGGCAAA+TGG + chr1.4:47364300-47364319 None:intergenic 40.0%
CGAGTCAACAGATGATTACT+TGG - chr1.4:47364198-47364217 MS.gene066120:CDS 40.0%
CGGTAACCTCATTAGGATTT+GGG + chr1.4:47363750-47363769 None:intergenic 40.0%
CTCATTGAGGGCTAATGAAT+GGG - chr1.4:47364255-47364274 MS.gene066120:CDS 40.0%
GAAGAGTCCTTGCTACAAAA+AGG + chr1.4:47364307-47364326 None:intergenic 40.0%
GAGCGATAGTCAATATCATC+TGG + chr1.4:47364460-47364479 None:intergenic 40.0%
GTCAACAGATGATTACTTGG+TGG - chr1.4:47364201-47364220 MS.gene066120:CDS 40.0%
TAATGTGGCTATTCACTGGT+TGG - chr1.4:47364357-47364376 MS.gene066120:CDS 40.0%
TACAAGGGAAATGCCATGAA+CGG + chr1.4:47364626-47364645 None:intergenic 40.0%
TAGTCAATATCATCTGGGAG+AGG + chr1.4:47364454-47364473 None:intergenic 40.0%
TCAAAATGAGATTCCGGAAG+TGG + chr1.4:47364031-47364050 None:intergenic 40.0%
TCTCATTGAGGGCTAATGAA+TGG - chr1.4:47364254-47364273 MS.gene066120:CDS 40.0%
TGATCACCCAAATCCTAATG+AGG - chr1.4:47363741-47363760 MS.gene066120:CDS 40.0%
TGTCTATGAAATCCAGTGGA+TGG + chr1.4:47364124-47364143 None:intergenic 40.0%
TTGGTGAGATATGATGAGGA+AGG - chr1.4:47364694-47364713 MS.gene066120:CDS 40.0%
! ACTTGGGGTTTTTCTCATTG+AGG - chr1.4:47364242-47364261 MS.gene066120:CDS 40.0%
! CCATTTGCCTTTTTGTAGCA+AGG - chr1.4:47364297-47364316 MS.gene066120:CDS 40.0%
! CTCTACGGATTGTGGTTTAT+GGG - chr1.4:47364477-47364496 MS.gene066120:CDS 40.0%
! CTTGGGGTTTTTCTCATTGA+GGG - chr1.4:47364243-47364262 MS.gene066120:CDS 40.0%
! TCTAAGTCTATGGGTTATGG+TGG - chr1.4:47364513-47364532 MS.gene066120:CDS 40.0%
! TTCACGAAATGGATTCCGAT+TGG - chr1.4:47364750-47364769 MS.gene066120:CDS 40.0%
!! GAAACCTAGTTTTCCACTTC+CGG - chr1.4:47364015-47364034 MS.gene066120:CDS 40.0%
!! TGGATTGGTGAGATATGATG+AGG - chr1.4:47364690-47364709 MS.gene066120:CDS 40.0%
CCGGTAACCTCATTAGGATT+TGG + chr1.4:47363751-47363770 None:intergenic 45.0%
CTTCTTCAACTCACACTCGT+AGG - chr1.4:47363861-47363880 MS.gene066120:CDS 45.0%
GATTCCGGAAGTGGAAAACT+AGG + chr1.4:47364022-47364041 None:intergenic 45.0%
! GCTCTACGGATTGTGGTTTA+TGG - chr1.4:47364476-47364495 MS.gene066120:CDS 45.0%
! TGTGAAGCATTAGGAGGGAA+AGG + chr1.4:47364151-47364170 None:intergenic 45.0%
!! GGTTATGGTGGATGACGATA+CGG - chr1.4:47364525-47364544 MS.gene066120:CDS 45.0%
AACAGACTGCCGTACTGGAT+TGG - chr1.4:47364675-47364694 MS.gene066120:CDS 50.0%
AAGCTTCCTCGTCGTCACTA+GGG + chr1.4:47364804-47364823 None:intergenic 50.0%
TAAGCTTCCTCGTCGTCACT+AGG + chr1.4:47364805-47364824 None:intergenic 50.0%
! GACTATCGCTCTACGGATTG+TGG - chr1.4:47364469-47364488 MS.gene066120:CDS 50.0%
!! GTGAAGAGTGTTGGAGAGGA+AGG + chr1.4:47363920-47363939 None:intergenic 50.0%
GGAGGTCGCGGAAATTATGG+CGG - chr1.4:47363688-47363707 MS.gene066120:CDS 55.0%
GTTGGAACAGACTGCCGTAC+TGG - chr1.4:47364670-47364689 MS.gene066120:CDS 55.0%
TTCACTCCCTAGTGACGACG+AGG - chr1.4:47364795-47364814 MS.gene066120:CDS 55.0%
! GGAAATTATGGCGGAGGTGG+CGG - chr1.4:47363697-47363716 MS.gene066120:CDS 55.0%
! GGAGTAGCGGTGAAGAGTGT+TGG + chr1.4:47363929-47363948 None:intergenic 55.0%
!! AGCGGTGAAGAGTGTTGGAG+AGG + chr1.4:47363924-47363943 None:intergenic 55.0%
GGCGGAGGTCGCGGAAATTA+TGG - chr1.4:47363685-47363704 MS.gene066120:CDS 60.0%
GGTCGCGGAAATTATGGCGG+AGG - chr1.4:47363691-47363710 MS.gene066120:CDS 60.0%
! CGCGGAAATTATGGCGGAGG+TGG - chr1.4:47363694-47363713 MS.gene066120:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 47363683 47364825 47363683 ID=MS.gene066120
chr1.4 mRNA 47363683 47364825 47363683 ID=MS.gene066120.t1;Parent=MS.gene066120
chr1.4 exon 47363683 47364825 47363683 ID=MS.gene066120.t1.exon1;Parent=MS.gene066120.t1
chr1.4 CDS 47363683 47364825 47363683 ID=cds.MS.gene066120.t1;Parent=MS.gene066120.t1
Gene Sequence

>MS.gene066120

ATGGCGGAGGTCGCGGAAATTATGGCGGAGGTGGCGGAACCGTATCTACCTGATGAATTGATCACCCAAATCCTAATGAGGTTACCGGTTAAGTCGCTTATCCGTTTCAAATCCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATAATCACTTTGCAAATTCACATTTTCAACTTACTTCTTCAACTCACACTCGTAGGATTCTTTTCTTAACCGTAAATTCACAGTTTCAACCTTCCTCTCCAACACTCTTCACCGCTACTCCTGAATTTCGATCTATAGATTTACCGTCATTGTTTACCTACGATGATTATAATGAACCTGTTCCACTGAAACCTAGTTTTCCACTTCCGGAATCTCATTTTGATCTTCTAATTAAAGGTTCATGTAGAGGGTTTATATTTTTGCACACTTGGTCTGAAGCTTATATATGGAATCCATCCACTGGATTTCATAGACAAATACCTTTCCCTCCTAATGCTTCACATTTAAGTTTTTTTGGTTTTGGGTATGACGAGTCAACAGATGATTACTTGGTGGTTTCAGTTTCGTTTGATTACTTGGGGTTTTTCTCATTGAGGGCTAATGAATGGGAAGAAATCGTGGATACTGTCCATTTGCCTTTTTGTAGCAAGGACTCTTCTTTTGTTTATCCCTTAGTAGAGTCAGTCTTTAATGTGGCTATTCACTGGTTGGCTTTACGTCTTGATACACGTGACTATCTTGTTGTTGCATTTGATTTAGTGGAAAGGAAACTTGTAGAGATTCCTCTCCCAGATGATATTGACTATCGCTCTACGGATTGTGGTTTATGGGTATTTAGAGGATTTCTAAGTCTATGGGTTATGGTGGATGACGATACGGTTGATATATGGGTAATGAAAGAATACAAAGTGCAGTCATCTTGGGCTAAAACTCTTGTTCTTACTACTTATGATACCGTTCATGGCATTTCCCTTGTATGTTGCACAAAAAGTGGTGATATTGTTGGAACAGACTGCCGTACTGGATTGGTGAGATATGATGAGGAAGGAGAGTTTTTAGAGCATTTCTACTATTGCAAAGATTCACGAAATGGATTCCGATTGGCTATGTATACAGAGTCTTTGCTTTCACTCCCTAGTGACGACGAGGAAGCTTAA

Protein sequence

>MS.gene066120.t1

MAEVAEIMAEVAEPYLPDELITQILMRLPVKSLIRFKSVCKSWFSLISDNHFANSHFQLTSSTHTRRILFLTVNSQFQPSSPTLFTATPEFRSIDLPSLFTYDDYNEPVPLKPSFPLPESHFDLLIKGSCRGFIFLHTWSEAYIWNPSTGFHRQIPFPPNASHLSFFGFGYDESTDDYLVVSVSFDYLGFFSLRANEWEEIVDTVHLPFCSKDSSFVYPLVESVFNVAIHWLALRLDTRDYLVVAFDLVERKLVEIPLPDDIDYRSTDCGLWVFRGFLSLWVMVDDDTVDIWVMKEYKVQSSWAKTLVLTTYDTVHGISLVCCTKSGDIVGTDCRTGLVRYDEEGEFLEHFYYCKDSRNGFRLAMYTESLLSLPSDDEEA