Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012215.t1 | PNX93614.1 | 78 | 282 | 59 | 1 | 259 | 537 | 35 | 316 | 6.70E-119 | 438.3 |
MS.gene012215.t1 | PNX93614.1 | 58.5 | 130 | 37 | 5 | 542 | 667 | 776 | 892 | 6.20E-24 | 122.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012215.t1 | Q9LIR8 | 26.3 | 251 | 163 | 9 | 8 | 251 | 17 | 252 | 5.5e-13 | 77.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012215.t1 | A0A2K3MSB5 | 78.0 | 282 | 59 | 1 | 259 | 537 | 35 | 316 | 4.8e-119 | 438.3 |
MS.gene012215.t1 | A0A2K3MSB5 | 58.5 | 130 | 37 | 5 | 542 | 667 | 776 | 892 | 4.5e-24 | 122.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012215.t1 | MTR_1g037540 | 43.357 | 286 | 121 | 10 | 1 | 250 | 1 | 281 | 2.08e-60 | 209 |
MS.gene012215.t1 | MTR_1g023400 | 39.773 | 264 | 125 | 12 | 4 | 254 | 2 | 244 | 8.44e-41 | 153 |
MS.gene012215.t1 | MTR_4g080200 | 37.795 | 254 | 129 | 9 | 5 | 250 | 3 | 235 | 1.52e-39 | 149 |
MS.gene012215.t1 | MTR_1g022200 | 41.538 | 260 | 121 | 12 | 4 | 250 | 14 | 255 | 1.95e-38 | 147 |
MS.gene012215.t1 | MTR_1g008000 | 41.872 | 203 | 68 | 5 | 62 | 259 | 4 | 161 | 3.06e-37 | 140 |
MS.gene012215.t1 | MTR_1g009110 | 37.786 | 262 | 143 | 10 | 2 | 250 | 11 | 265 | 3.49e-37 | 143 |
MS.gene012215.t1 | MTR_7g039280 | 39.103 | 156 | 80 | 3 | 372 | 527 | 1 | 141 | 6.44e-32 | 124 |
MS.gene012215.t1 | MTR_4g048330 | 32.973 | 185 | 108 | 3 | 366 | 550 | 77 | 245 | 1.04e-31 | 129 |
MS.gene012215.t1 | MTR_7g013590 | 29.555 | 247 | 159 | 6 | 8 | 250 | 39 | 274 | 7.35e-22 | 99.0 |
MS.gene012215.t1 | MTR_1g022105 | 31.439 | 264 | 108 | 9 | 4 | 250 | 20 | 227 | 8.62e-21 | 94.4 |
MS.gene012215.t1 | MTR_6g021880 | 27.049 | 244 | 161 | 7 | 16 | 250 | 31 | 266 | 2.22e-19 | 91.3 |
MS.gene012215.t1 | MTR_7g016930 | 27.530 | 247 | 166 | 6 | 8 | 251 | 19 | 255 | 2.54e-19 | 90.5 |
MS.gene012215.t1 | MTR_6g004660 | 26.378 | 254 | 166 | 8 | 9 | 250 | 20 | 264 | 8.35e-19 | 89.4 |
MS.gene012215.t1 | MTR_3g034130 | 29.070 | 258 | 167 | 9 | 8 | 257 | 12 | 261 | 1.31e-18 | 89.0 |
MS.gene012215.t1 | MTR_5g007160 | 36.667 | 120 | 62 | 2 | 372 | 491 | 1 | 106 | 1.89e-18 | 84.0 |
MS.gene012215.t1 | MTR_3g007360 | 27.820 | 266 | 167 | 10 | 8 | 264 | 55 | 304 | 5.44e-18 | 87.4 |
MS.gene012215.t1 | MTR_3g007410 | 27.820 | 266 | 167 | 10 | 8 | 264 | 55 | 304 | 1.01e-17 | 86.7 |
MS.gene012215.t1 | MTR_2g021155 | 28.287 | 251 | 154 | 8 | 8 | 250 | 39 | 271 | 2.10e-17 | 87.4 |
MS.gene012215.t1 | MTR_3g014540 | 25.984 | 254 | 160 | 9 | 8 | 250 | 32 | 268 | 3.03e-17 | 84.7 |
MS.gene012215.t1 | MTR_6g027910 | 28.625 | 269 | 150 | 14 | 8 | 250 | 12 | 264 | 3.94e-17 | 84.3 |
MS.gene012215.t1 | MTR_4g130330 | 27.138 | 269 | 150 | 12 | 8 | 244 | 10 | 264 | 4.90e-17 | 84.3 |
MS.gene012215.t1 | MTR_3g030250 | 27.490 | 251 | 148 | 8 | 8 | 250 | 40 | 264 | 6.81e-17 | 83.6 |
MS.gene012215.t1 | MTR_8g073550 | 29.000 | 200 | 121 | 6 | 8 | 197 | 33 | 221 | 8.71e-17 | 80.9 |
MS.gene012215.t1 | MTR_6g007135 | 27.481 | 262 | 151 | 10 | 8 | 250 | 29 | 270 | 1.66e-16 | 82.8 |
MS.gene012215.t1 | MTR_3g013770 | 26.459 | 257 | 160 | 7 | 8 | 250 | 36 | 277 | 1.77e-16 | 82.4 |
MS.gene012215.t1 | MTR_3g006530 | 25.769 | 260 | 156 | 9 | 8 | 250 | 43 | 282 | 1.82e-16 | 82.4 |
MS.gene012215.t1 | MTR_3g034180 | 28.185 | 259 | 168 | 10 | 8 | 257 | 126 | 375 | 2.19e-16 | 83.2 |
MS.gene012215.t1 | MTR_1g007450 | 28.938 | 273 | 163 | 12 | 4 | 252 | 11 | 276 | 2.64e-16 | 82.4 |
MS.gene012215.t1 | MTR_2g046830 | 26.820 | 261 | 166 | 8 | 8 | 265 | 28 | 266 | 9.01e-16 | 80.5 |
MS.gene012215.t1 | MTR_0044s0300 | 24.710 | 259 | 153 | 11 | 8 | 250 | 41 | 273 | 9.16e-16 | 80.5 |
MS.gene012215.t1 | MTR_3g010430 | 25.746 | 268 | 156 | 9 | 8 | 251 | 39 | 287 | 1.03e-15 | 80.5 |
MS.gene012215.t1 | MTR_5g057790 | 23.746 | 299 | 177 | 8 | 8 | 281 | 49 | 321 | 1.15e-15 | 80.1 |
MS.gene012215.t1 | MTR_8g093280 | 41.414 | 99 | 50 | 1 | 9 | 107 | 11 | 101 | 1.46e-15 | 73.6 |
MS.gene012215.t1 | MTR_5g011200 | 27.132 | 258 | 153 | 12 | 8 | 250 | 20 | 257 | 2.34e-15 | 79.0 |
MS.gene012215.t1 | MTR_5g057020 | 23.390 | 295 | 168 | 8 | 8 | 281 | 49 | 306 | 2.73e-15 | 78.6 |
MS.gene012215.t1 | MTR_3g006570 | 26.744 | 258 | 150 | 9 | 8 | 251 | 24 | 256 | 2.92e-15 | 78.6 |
MS.gene012215.t1 | MTR_6g065980 | 25.692 | 253 | 146 | 10 | 8 | 250 | 19 | 239 | 2.98e-15 | 78.6 |
MS.gene012215.t1 | MTR_2g029990 | 25.581 | 258 | 153 | 8 | 8 | 250 | 54 | 287 | 4.72e-15 | 78.2 |
MS.gene012215.t1 | MTR_2g021190 | 27.626 | 257 | 151 | 11 | 8 | 250 | 24 | 259 | 5.28e-15 | 77.8 |
MS.gene012215.t1 | MTR_3g058480 | 24.265 | 272 | 166 | 11 | 8 | 245 | 42 | 307 | 5.33e-15 | 77.4 |
MS.gene012215.t1 | MTR_4g116330 | 25.368 | 272 | 178 | 9 | 8 | 274 | 26 | 277 | 6.89e-15 | 77.4 |
MS.gene012215.t1 | MTR_6g053260 | 27.451 | 255 | 154 | 10 | 8 | 250 | 340 | 575 | 8.55e-15 | 78.6 |
MS.gene012215.t1 | MTR_4g461050 | 33.103 | 145 | 74 | 3 | 394 | 533 | 238 | 364 | 8.77e-15 | 77.4 |
MS.gene012215.t1 | MTR_4g028510 | 22.776 | 281 | 164 | 11 | 8 | 252 | 19 | 282 | 1.02e-14 | 77.8 |
MS.gene012215.t1 | MTR_5g057710 | 25.283 | 265 | 173 | 7 | 8 | 264 | 49 | 296 | 1.10e-14 | 77.0 |
MS.gene012215.t1 | MTR_3g103020 | 26.255 | 259 | 164 | 11 | 8 | 258 | 23 | 262 | 1.25e-14 | 76.6 |
MS.gene012215.t1 | MTR_0115s0020 | 27.306 | 271 | 154 | 11 | 8 | 250 | 13 | 268 | 1.28e-14 | 77.0 |
MS.gene012215.t1 | MTR_2g021150 | 25.000 | 256 | 161 | 9 | 8 | 250 | 17 | 254 | 1.39e-14 | 76.6 |
MS.gene012215.t1 | MTR_4g028660 | 22.939 | 279 | 179 | 10 | 8 | 258 | 19 | 289 | 1.49e-14 | 76.6 |
MS.gene012215.t1 | MTR_4g027450 | 22.939 | 279 | 179 | 10 | 8 | 258 | 19 | 289 | 1.49e-14 | 76.6 |
MS.gene012215.t1 | MTR_1g056710 | 27.706 | 231 | 127 | 12 | 8 | 222 | 37 | 243 | 1.83e-14 | 76.3 |
MS.gene012215.t1 | MTR_6g048120 | 25.651 | 269 | 148 | 11 | 8 | 250 | 39 | 281 | 1.85e-14 | 76.6 |
MS.gene012215.t1 | MTR_3g030350 | 25.442 | 283 | 152 | 12 | 8 | 272 | 38 | 279 | 1.92e-14 | 76.3 |
MS.gene012215.t1 | MTR_1g054575 | 26.070 | 257 | 158 | 10 | 12 | 263 | 59 | 288 | 1.95e-14 | 77.4 |
MS.gene012215.t1 | MTR_1g097560 | 24.014 | 279 | 174 | 13 | 2 | 276 | 33 | 277 | 2.59e-14 | 75.9 |
MS.gene012215.t1 | MTR_7g070440 | 26.459 | 257 | 165 | 8 | 8 | 255 | 10 | 251 | 3.46e-14 | 75.5 |
MS.gene012215.t1 | MTR_4g107820 | 22.835 | 254 | 167 | 10 | 8 | 253 | 39 | 271 | 3.63e-14 | 75.5 |
MS.gene012215.t1 | MTR_4g107780 | 22.835 | 254 | 167 | 10 | 8 | 253 | 39 | 271 | 3.63e-14 | 75.5 |
MS.gene012215.t1 | MTR_4g107780 | 22.835 | 254 | 167 | 10 | 8 | 253 | 39 | 271 | 4.06e-14 | 75.5 |
MS.gene012215.t1 | MTR_4g107820 | 22.835 | 254 | 167 | 10 | 8 | 253 | 39 | 271 | 4.13e-14 | 75.5 |
MS.gene012215.t1 | MTR_8g467140 | 27.481 | 262 | 159 | 12 | 8 | 262 | 35 | 272 | 4.57e-14 | 74.3 |
MS.gene012215.t1 | MTR_3g036430 | 25.692 | 253 | 138 | 10 | 4 | 250 | 19 | 227 | 4.68e-14 | 74.7 |
MS.gene012215.t1 | MTR_4g116340 | 28.378 | 222 | 125 | 10 | 8 | 222 | 39 | 233 | 5.29e-14 | 72.8 |
MS.gene012215.t1 | MTR_4g021785 | 27.200 | 250 | 162 | 7 | 8 | 257 | 12 | 241 | 5.30e-14 | 74.7 |
MS.gene012215.t1 | MTR_3g024110 | 24.409 | 254 | 155 | 10 | 8 | 251 | 104 | 330 | 5.83e-14 | 75.1 |
MS.gene012215.t1 | MTR_5g097220 | 26.102 | 295 | 150 | 14 | 1 | 244 | 9 | 286 | 6.42e-14 | 74.7 |
MS.gene012215.t1 | MTR_2g078850 | 26.437 | 261 | 147 | 10 | 8 | 250 | 33 | 266 | 6.48e-14 | 74.3 |
MS.gene012215.t1 | MTR_2g046920 | 27.600 | 250 | 159 | 9 | 8 | 252 | 27 | 259 | 8.20e-14 | 74.3 |
MS.gene012215.t1 | MTR_3g014570 | 25.794 | 252 | 163 | 8 | 8 | 250 | 32 | 268 | 9.10e-14 | 73.9 |
MS.gene012215.t1 | MTR_4g024870 | 28.509 | 228 | 135 | 8 | 8 | 222 | 47 | 259 | 9.23e-14 | 74.3 |
MS.gene012215.t1 | MTR_5g022420 | 23.506 | 251 | 155 | 9 | 8 | 250 | 30 | 251 | 9.64e-14 | 73.9 |
MS.gene012215.t1 | MTR_6g477740 | 28.022 | 182 | 63 | 3 | 270 | 451 | 1 | 114 | 1.12e-13 | 72.4 |
MS.gene012215.t1 | MTR_5g075370 | 27.273 | 297 | 146 | 15 | 8 | 256 | 11 | 285 | 1.21e-13 | 75.1 |
MS.gene012215.t1 | MTR_3g030330 | 26.054 | 261 | 140 | 10 | 8 | 250 | 23 | 248 | 1.21e-13 | 73.6 |
MS.gene012215.t1 | MTR_3g007430 | 26.515 | 264 | 162 | 11 | 8 | 261 | 46 | 287 | 1.21e-13 | 73.9 |
MS.gene012215.t1 | MTR_8g012090 | 27.099 | 262 | 138 | 13 | 8 | 252 | 19 | 244 | 1.23e-13 | 73.2 |
MS.gene012215.t1 | MTR_4g117780 | 27.083 | 240 | 155 | 7 | 8 | 244 | 14 | 236 | 1.26e-13 | 73.6 |
MS.gene012215.t1 | MTR_4g023440 | 24.797 | 246 | 157 | 9 | 8 | 246 | 21 | 245 | 1.68e-13 | 72.8 |
MS.gene012215.t1 | MTR_2g426070 | 21.293 | 263 | 179 | 7 | 8 | 250 | 9 | 263 | 1.69e-13 | 73.6 |
MS.gene012215.t1 | MTR_3g010590 | 25.301 | 249 | 152 | 7 | 8 | 250 | 42 | 262 | 1.78e-13 | 73.2 |
MS.gene012215.t1 | MTR_7g407070 | 27.444 | 266 | 155 | 13 | 8 | 250 | 35 | 285 | 1.79e-13 | 73.6 |
MS.gene012215.t1 | MTR_5g094350 | 24.627 | 268 | 167 | 10 | 8 | 252 | 16 | 271 | 2.08e-13 | 71.6 |
MS.gene012215.t1 | MTR_4g028680 | 25.311 | 241 | 146 | 9 | 8 | 222 | 19 | 251 | 2.40e-13 | 73.2 |
MS.gene012215.t1 | MTR_2g425980 | 23.711 | 291 | 192 | 10 | 1 | 275 | 1 | 277 | 2.68e-13 | 72.8 |
MS.gene012215.t1 | MTR_6g004210 | 27.273 | 264 | 154 | 13 | 16 | 250 | 36 | 290 | 2.98e-13 | 72.8 |
MS.gene012215.t1 | MTR_4g117770 | 27.459 | 244 | 149 | 9 | 8 | 244 | 14 | 236 | 3.01e-13 | 72.4 |
MS.gene012215.t1 | MTR_4g117810 | 27.459 | 244 | 149 | 9 | 8 | 244 | 14 | 236 | 3.01e-13 | 72.4 |
MS.gene012215.t1 | MTR_8g101940 | 25.446 | 224 | 143 | 6 | 8 | 223 | 5 | 212 | 3.11e-13 | 72.4 |
MS.gene012215.t1 | MTR_7g007300 | 28.994 | 169 | 95 | 7 | 8 | 162 | 106 | 263 | 3.15e-13 | 72.8 |
MS.gene012215.t1 | MTR_2g021252 | 29.299 | 157 | 106 | 3 | 8 | 162 | 50 | 203 | 3.30e-13 | 72.4 |
MS.gene012215.t1 | MTR_6g070880 | 27.011 | 174 | 107 | 5 | 8 | 161 | 35 | 208 | 3.37e-13 | 70.9 |
MS.gene012215.t1 | MTR_6g071420 | 27.011 | 174 | 107 | 5 | 8 | 161 | 35 | 208 | 3.37e-13 | 70.9 |
MS.gene012215.t1 | MTR_3g034160 | 26.906 | 223 | 150 | 7 | 8 | 222 | 12 | 229 | 3.88e-13 | 72.0 |
MS.gene012215.t1 | MTR_1g055135 | 25.954 | 262 | 175 | 8 | 8 | 265 | 16 | 262 | 3.92e-13 | 72.0 |
MS.gene012215.t1 | MTR_6g053240 | 25.000 | 264 | 154 | 10 | 8 | 250 | 31 | 271 | 4.02e-13 | 72.4 |
MS.gene012215.t1 | MTR_7g066850 | 25.820 | 244 | 154 | 9 | 8 | 245 | 26 | 248 | 4.98e-13 | 72.4 |
MS.gene012215.t1 | MTR_5g046300 | 23.938 | 259 | 152 | 11 | 8 | 250 | 7 | 236 | 5.06e-13 | 71.6 |
MS.gene012215.t1 | MTR_5g046290 | 23.938 | 259 | 152 | 11 | 8 | 250 | 7 | 236 | 5.06e-13 | 71.6 |
MS.gene012215.t1 | MTR_6g089990 | 55.932 | 59 | 24 | 1 | 4 | 60 | 54 | 112 | 5.73e-13 | 69.3 |
MS.gene012215.t1 | MTR_3g464470 | 23.830 | 235 | 154 | 7 | 7 | 233 | 9 | 226 | 5.79e-13 | 71.6 |
MS.gene012215.t1 | MTR_3g011120 | 26.007 | 273 | 172 | 9 | 2 | 255 | 11 | 272 | 5.83e-13 | 71.6 |
MS.gene012215.t1 | MTR_8g464770 | 26.282 | 312 | 177 | 13 | 8 | 288 | 15 | 304 | 5.84e-13 | 71.6 |
MS.gene012215.t1 | MTR_2g021950 | 23.630 | 292 | 193 | 11 | 8 | 278 | 19 | 301 | 6.34e-13 | 71.6 |
MS.gene012215.t1 | MTR_7g017130 | 27.372 | 274 | 154 | 13 | 8 | 252 | 21 | 278 | 6.76e-13 | 71.6 |
MS.gene012215.t1 | MTR_3g013740 | 27.429 | 175 | 116 | 4 | 1 | 165 | 40 | 213 | 6.94e-13 | 71.6 |
MS.gene012215.t1 | MTR_1g055375 | 26.820 | 261 | 154 | 11 | 8 | 250 | 7 | 248 | 7.28e-13 | 71.2 |
MS.gene012215.t1 | MTR_4g006840 | 28.125 | 160 | 104 | 3 | 8 | 165 | 2 | 152 | 7.48e-13 | 69.3 |
MS.gene012215.t1 | MTR_7g017170 | 27.372 | 274 | 154 | 13 | 8 | 252 | 21 | 278 | 7.95e-13 | 71.2 |
MS.gene012215.t1 | MTR_3g009310 | 25.591 | 254 | 166 | 8 | 8 | 253 | 45 | 283 | 8.74e-13 | 71.2 |
MS.gene012215.t1 | MTR_4g061340 | 26.415 | 265 | 150 | 13 | 8 | 250 | 29 | 270 | 9.12e-13 | 70.9 |
MS.gene012215.t1 | MTR_3g006500 | 25.519 | 337 | 173 | 16 | 8 | 319 | 20 | 303 | 9.47e-13 | 70.9 |
MS.gene012215.t1 | MTR_4g129190 | 25.652 | 230 | 135 | 9 | 8 | 222 | 9 | 217 | 9.88e-13 | 70.9 |
MS.gene012215.t1 | MTR_3g010870 | 25.000 | 252 | 156 | 7 | 8 | 250 | 40 | 267 | 9.88e-13 | 70.9 |
MS.gene012215.t1 | MTR_5g057690 | 23.864 | 264 | 141 | 7 | 8 | 250 | 49 | 273 | 1.00e-12 | 70.9 |
MS.gene012215.t1 | MTR_3g058470 | 23.669 | 169 | 112 | 3 | 8 | 162 | 40 | 205 | 1.02e-12 | 70.9 |
MS.gene012215.t1 | MTR_3g058440 | 23.622 | 254 | 146 | 9 | 8 | 239 | 38 | 265 | 1.05e-12 | 70.1 |
MS.gene012215.t1 | MTR_2g047832 | 26.838 | 272 | 172 | 9 | 8 | 265 | 32 | 290 | 1.21e-12 | 70.9 |
MS.gene012215.t1 | MTR_1g055055 | 28.016 | 257 | 134 | 13 | 8 | 252 | 29 | 246 | 1.23e-12 | 70.1 |
MS.gene012215.t1 | MTR_4g094365 | 26.592 | 267 | 160 | 9 | 8 | 263 | 11 | 252 | 1.39e-12 | 70.5 |
MS.gene012215.t1 | MTR_4g030110 | 26.613 | 248 | 139 | 10 | 8 | 234 | 33 | 258 | 1.45e-12 | 70.5 |
MS.gene012215.t1 | MTR_2g034700 | 27.559 | 254 | 154 | 10 | 8 | 244 | 17 | 257 | 1.48e-12 | 70.5 |
MS.gene012215.t1 | MTR_4g013185 | 28.906 | 256 | 135 | 12 | 5 | 229 | 10 | 249 | 1.57e-12 | 70.5 |
MS.gene012215.t1 | MTR_7g017040 | 28.194 | 227 | 146 | 9 | 8 | 221 | 19 | 241 | 1.81e-12 | 70.1 |
MS.gene012215.t1 | MTR_7g056290 | 27.562 | 283 | 142 | 15 | 8 | 250 | 25 | 284 | 1.90e-12 | 70.5 |
MS.gene012215.t1 | MTR_1g094210 | 24.696 | 247 | 160 | 6 | 8 | 250 | 60 | 284 | 2.23e-12 | 70.1 |
MS.gene012215.t1 | MTR_3g096250 | 30.435 | 184 | 106 | 9 | 8 | 180 | 50 | 222 | 2.32e-12 | 69.3 |
MS.gene012215.t1 | MTR_1g094210 | 23.887 | 247 | 162 | 7 | 8 | 250 | 60 | 284 | 2.33e-12 | 70.1 |
MS.gene012215.t1 | MTR_8g046310 | 27.536 | 276 | 159 | 15 | 8 | 264 | 19 | 272 | 2.65e-12 | 69.7 |
MS.gene012215.t1 | MTR_3g036335 | 25.097 | 259 | 156 | 11 | 8 | 250 | 44 | 280 | 2.79e-12 | 69.7 |
MS.gene012215.t1 | MTR_3g011650 | 27.632 | 228 | 128 | 12 | 8 | 224 | 82 | 283 | 3.02e-12 | 68.2 |
MS.gene012215.t1 | MTR_8g101580 | 22.684 | 313 | 194 | 11 | 12 | 297 | 53 | 344 | 3.11e-12 | 69.3 |
MS.gene012215.t1 | MTR_4g055060 | 25.514 | 243 | 162 | 7 | 8 | 240 | 33 | 266 | 3.17e-12 | 69.3 |
MS.gene012215.t1 | MTR_3g463780 | 41.176 | 68 | 40 | 0 | 396 | 463 | 17 | 84 | 3.67e-12 | 65.9 |
MS.gene012215.t1 | MTR_3g009240 | 26.210 | 248 | 163 | 10 | 8 | 250 | 39 | 271 | 3.74e-12 | 69.3 |
MS.gene012215.t1 | MTR_1g097490 | 23.904 | 251 | 154 | 7 | 1 | 240 | 45 | 269 | 3.76e-12 | 69.3 |
MS.gene012215.t1 | MTR_5g068040 | 23.333 | 300 | 157 | 13 | 8 | 266 | 19 | 286 | 3.81e-12 | 68.9 |
MS.gene012215.t1 | MTR_4g116330 | 24.887 | 221 | 145 | 6 | 8 | 223 | 26 | 230 | 4.32e-12 | 68.6 |
MS.gene012215.t1 | MTR_5g057643 | 26.163 | 172 | 96 | 4 | 8 | 162 | 49 | 206 | 4.46e-12 | 67.4 |
MS.gene012215.t1 | MTR_7g061050 | 33.577 | 137 | 69 | 6 | 7 | 126 | 15 | 146 | 4.59e-12 | 68.9 |
MS.gene012215.t1 | MTR_8g062660 | 25.843 | 267 | 153 | 11 | 8 | 251 | 25 | 269 | 5.46e-12 | 69.7 |
MS.gene012215.t1 | MTR_3g464500 | 24.896 | 241 | 153 | 9 | 7 | 236 | 29 | 252 | 5.84e-12 | 68.6 |
MS.gene012215.t1 | MTR_3g009260 | 27.500 | 240 | 147 | 12 | 8 | 241 | 44 | 262 | 6.45e-12 | 68.6 |
MS.gene012215.t1 | MTR_5g097680 | 23.179 | 302 | 163 | 9 | 8 | 252 | 20 | 309 | 6.55e-12 | 68.6 |
MS.gene012215.t1 | MTR_2g046900 | 25.781 | 256 | 164 | 8 | 8 | 252 | 31 | 271 | 8.81e-12 | 68.2 |
MS.gene012215.t1 | MTR_6g055210 | 25.652 | 230 | 156 | 7 | 8 | 227 | 25 | 249 | 1.20e-11 | 67.8 |
MS.gene012215.t1 | MTR_4g023080 | 25.090 | 279 | 170 | 12 | 8 | 278 | 12 | 259 | 1.26e-11 | 67.4 |
MS.gene012215.t1 | MTR_1g055070 | 23.856 | 306 | 164 | 16 | 8 | 275 | 52 | 326 | 1.29e-11 | 67.4 |
MS.gene012215.t1 | MTR_3g024150 | 24.510 | 306 | 176 | 15 | 8 | 301 | 38 | 300 | 1.31e-11 | 67.4 |
MS.gene012215.t1 | MTR_2g066150 | 26.344 | 186 | 131 | 4 | 8 | 189 | 15 | 198 | 1.33e-11 | 67.4 |
MS.gene012215.t1 | MTR_6g048140 | 23.048 | 269 | 157 | 8 | 4 | 250 | 38 | 278 | 1.41e-11 | 67.4 |
MS.gene012215.t1 | MTR_2g021210 | 32.500 | 160 | 88 | 9 | 8 | 160 | 87 | 233 | 1.42e-11 | 67.8 |
MS.gene012215.t1 | MTR_4g024890 | 26.778 | 239 | 150 | 9 | 5 | 233 | 10 | 233 | 1.56e-11 | 67.4 |
MS.gene012215.t1 | MTR_3g009250 | 27.149 | 221 | 137 | 10 | 8 | 224 | 44 | 244 | 1.65e-11 | 65.5 |
MS.gene012215.t1 | MTR_5g097650 | 26.984 | 126 | 86 | 3 | 8 | 130 | 25 | 147 | 1.89e-11 | 63.2 |
MS.gene012215.t1 | MTR_6g079770 | 24.324 | 185 | 100 | 5 | 8 | 161 | 20 | 195 | 1.93e-11 | 67.0 |
MS.gene012215.t1 | MTR_4g023150 | 26.923 | 234 | 150 | 7 | 18 | 251 | 23 | 235 | 1.95e-11 | 66.6 |
MS.gene012215.t1 | MTR_0054s0100 | 22.000 | 400 | 244 | 19 | 8 | 356 | 20 | 402 | 1.96e-11 | 67.0 |
MS.gene012215.t1 | MTR_3g083640 | 23.600 | 250 | 153 | 11 | 8 | 244 | 58 | 282 | 2.10e-11 | 67.0 |
MS.gene012215.t1 | MTR_2g055970 | 24.809 | 262 | 172 | 9 | 8 | 265 | 214 | 454 | 2.12e-11 | 67.4 |
MS.gene012215.t1 | MTR_5g092850 | 24.555 | 281 | 162 | 12 | 8 | 252 | 19 | 285 | 2.28e-11 | 67.0 |
MS.gene012215.t1 | MTR_2g021770 | 23.767 | 223 | 136 | 8 | 1 | 203 | 8 | 216 | 2.56e-11 | 66.6 |
MS.gene012215.t1 | MTR_3g010390 | 26.946 | 167 | 105 | 6 | 8 | 162 | 36 | 197 | 2.68e-11 | 66.6 |
MS.gene012215.t1 | MTR_6g090010 | 57.692 | 52 | 21 | 1 | 3 | 53 | 53 | 104 | 2.71e-11 | 63.2 |
MS.gene012215.t1 | MTR_6g017270 | 28.079 | 203 | 118 | 9 | 8 | 192 | 12 | 204 | 2.82e-11 | 66.2 |
MS.gene012215.t1 | MTR_7g078860 | 27.957 | 186 | 111 | 7 | 2 | 169 | 6 | 186 | 2.83e-11 | 66.6 |
MS.gene012215.t1 | MTR_5g072060 | 27.016 | 248 | 152 | 11 | 8 | 242 | 9 | 240 | 3.52e-11 | 67.0 |
MS.gene012215.t1 | MTR_3g010520 | 24.161 | 298 | 171 | 10 | 8 | 301 | 28 | 274 | 3.73e-11 | 65.9 |
MS.gene012215.t1 | MTR_1g088120 | 30.460 | 174 | 95 | 5 | 5 | 160 | 10 | 175 | 4.88e-11 | 65.9 |
MS.gene012215.t1 | MTR_5g057040 | 28.313 | 166 | 100 | 5 | 8 | 162 | 49 | 206 | 5.13e-11 | 66.6 |
MS.gene012215.t1 | MTR_1g053510 | 26.389 | 288 | 154 | 14 | 8 | 253 | 18 | 289 | 5.32e-11 | 65.9 |
MS.gene012215.t1 | MTR_1g054725 | 26.482 | 253 | 164 | 10 | 8 | 250 | 23 | 263 | 5.69e-11 | 65.5 |
MS.gene012215.t1 | MTR_0054s0090 | 22.494 | 409 | 233 | 20 | 8 | 358 | 20 | 402 | 5.71e-11 | 65.5 |
MS.gene012215.t1 | MTR_3g011100 | 25.097 | 259 | 162 | 11 | 8 | 250 | 238 | 480 | 6.36e-11 | 66.2 |
MS.gene012215.t1 | MTR_7g056390 | 26.148 | 283 | 146 | 15 | 8 | 250 | 21 | 280 | 6.46e-11 | 65.5 |
MS.gene012215.t1 | MTR_0620s0010 | 58.696 | 46 | 19 | 0 | 4 | 49 | 5 | 50 | 6.54e-11 | 58.9 |
MS.gene012215.t1 | MTR_4g030090 | 25.610 | 246 | 156 | 11 | 1 | 233 | 10 | 241 | 6.76e-11 | 65.5 |
MS.gene012215.t1 | MTR_4g030830 | 27.451 | 204 | 124 | 9 | 7 | 196 | 11 | 204 | 7.93e-11 | 65.1 |
MS.gene012215.t1 | MTR_2g078900 | 24.609 | 256 | 152 | 9 | 8 | 250 | 36 | 263 | 8.10e-11 | 64.7 |
MS.gene012215.t1 | MTR_4g013180 | 32.331 | 133 | 72 | 5 | 5 | 126 | 11 | 136 | 8.67e-11 | 65.5 |
MS.gene012215.t1 | MTR_3g010970 | 22.680 | 388 | 234 | 15 | 8 | 381 | 51 | 386 | 9.42e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012215.t1 | AT1G21280 | 32.000 | 200 | 133 | 2 | 259 | 456 | 38 | 236 | 4.35e-32 | 125 |
MS.gene012215.t1 | AT3G16210 | 25.000 | 256 | 154 | 10 | 1 | 251 | 1 | 223 | 1.40e-13 | 73.6 |
MS.gene012215.t1 | AT3G17530 | 25.532 | 282 | 187 | 11 | 8 | 284 | 9 | 272 | 1.86e-13 | 73.2 |
MS.gene012215.t1 | AT1G12870 | 24.324 | 259 | 174 | 8 | 2 | 250 | 30 | 276 | 1.57e-12 | 70.5 |
MS.gene012215.t1 | AT3G23880 | 26.295 | 251 | 163 | 8 | 8 | 251 | 17 | 252 | 3.14e-12 | 69.3 |
MS.gene012215.t1 | AT3G23260 | 24.906 | 265 | 156 | 13 | 3 | 253 | 4 | 239 | 5.81e-12 | 68.6 |
MS.gene012215.t1 | AT1G11270 | 26.154 | 260 | 148 | 11 | 8 | 250 | 38 | 270 | 2.14e-11 | 66.2 |
MS.gene012215.t1 | AT1G11270 | 26.154 | 260 | 148 | 11 | 8 | 250 | 38 | 270 | 2.14e-11 | 66.2 |
MS.gene012215.t1 | AT2G02030 | 24.460 | 278 | 167 | 10 | 12 | 260 | 46 | 309 | 2.52e-11 | 66.2 |
MS.gene012215.t1 | AT1G47790 | 22.677 | 269 | 163 | 11 | 2 | 256 | 22 | 259 | 3.57e-11 | 66.2 |
MS.gene012215.t1 | AT4G12560 | 22.441 | 254 | 177 | 10 | 8 | 250 | 7 | 251 | 4.34e-11 | 66.2 |
MS.gene012215.t1 | AT4G12560 | 22.441 | 254 | 177 | 10 | 8 | 250 | 7 | 251 | 4.34e-11 | 66.2 |
MS.gene012215.t1 | AT4G12560 | 22.441 | 254 | 177 | 10 | 8 | 250 | 7 | 251 | 4.34e-11 | 66.2 |
MS.gene012215.t1 | AT3G17570 | 27.027 | 259 | 131 | 11 | 8 | 247 | 8 | 227 | 7.05e-11 | 65.1 |
MS.gene012215.t1 | AT4G19940 | 23.810 | 315 | 190 | 13 | 8 | 300 | 38 | 324 | 7.71e-11 | 65.5 |
Find 139 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAAATATATCGTCCAATT+AGG | 0.165900 | 8.3:+4619245 | MS.gene012215:CDS |
AACTACAATACTCTTGTTAA+TGG | 0.221326 | 8.3:+4618281 | MS.gene012215:CDS |
TGATTTCAATTGGGTATAAT+AGG | 0.225473 | 8.3:-4619209 | None:intergenic |
GGCAGAGGCCGCAGAAATTT+TGG | 0.225496 | 8.3:+4619580 | MS.gene012215:CDS |
GGTGTTTATCATTGGCTTAT+AGG | 0.230766 | 8.3:+4618302 | MS.gene012215:CDS |
GGACATATTGAAGGAAAATT+TGG | 0.254307 | 8.3:-4621332 | None:intergenic |
TAAGAGCTTTGGAGGAGATT+TGG | 0.257516 | 8.3:+4617659 | MS.gene012215:CDS |
TGTTAAAATTGTGGTCATTA+TGG | 0.266117 | 8.3:-4618331 | None:intergenic |
CAATGGGAAATCTGTCAATT+TGG | 0.266487 | 8.3:+4619723 | MS.gene012215:CDS |
ATACCCAATTGAAATCATTA+TGG | 0.267264 | 8.3:+4619215 | MS.gene012215:CDS |
TCACTTCTACCAGTGTGATA+TGG | 0.272065 | 8.3:-4618254 | None:intergenic |
TCTTCTTCTTGTACCATAGA+TGG | 0.276807 | 8.3:-4617831 | None:intergenic |
GCTGAAGAATTGATTGGTTT+TGG | 0.299406 | 8.3:+4618077 | MS.gene012215:CDS |
CATTGATAATGCAGAAAATT+CGG | 0.311134 | 8.3:+4621415 | MS.gene012215:CDS |
TGAAATATATCGTCCAATTA+GGG | 0.312663 | 8.3:+4619246 | MS.gene012215:CDS |
CCATGATGCCGAAAACAATA+TGG | 0.324952 | 8.3:-4618407 | None:intergenic |
GCACAAGTGCAATCCCTAAT+TGG | 0.331490 | 8.3:-4619259 | None:intergenic |
GGATACTAGGGCAAGGGATA+AGG | 0.331740 | 8.3:-4618217 | None:intergenic |
AGTCTTGACGATGATCTTCT+TGG | 0.335690 | 8.3:-4617977 | None:intergenic |
ATGGCAAGAATTATCATTCA+TGG | 0.345097 | 8.3:+4618885 | MS.gene012215:CDS |
TCTCGTGATCTTTCCATCTA+TGG | 0.349068 | 8.3:+4617818 | MS.gene012215:CDS |
CTGATCCTTTATATGATCCT+TGG | 0.353548 | 8.3:+4618987 | MS.gene012215:CDS |
AACTATGTCAACAGAAGGTT+GGG | 0.355631 | 8.3:-4618042 | None:intergenic |
TACCCAATTGAAATCATTAT+GGG | 0.361511 | 8.3:+4619216 | MS.gene012215:CDS |
AAATTGTGGTCATTATGGTT+AGG | 0.362120 | 8.3:-4618326 | None:intergenic |
AAACGCATCAATGACTTTGC+TGG | 0.369627 | 8.3:-4617705 | None:intergenic |
ATATTGCAAAATCTATCATT+TGG | 0.371351 | 8.3:+4619062 | MS.gene012215:CDS |
TTTGGAACGATCTCGAGTTT+AGG | 0.373686 | 8.3:+4619104 | MS.gene012215:CDS |
GTAGTTGAAATTGATTGTTT+TGG | 0.377229 | 8.3:-4618370 | None:intergenic |
TGCAGAAAATTCGGCAACTT+TGG | 0.378298 | 8.3:+4621424 | MS.gene012215:CDS |
TCTGCTGCAGAAACAGTTAA+AGG | 0.379194 | 8.3:-4621362 | None:intergenic |
CTTCCCATAATGATTTCAAT+TGG | 0.383938 | 8.3:-4619219 | None:intergenic |
ACTGCTCATTCAAGCCTTTG+AGG | 0.386150 | 8.3:-4619351 | None:intergenic |
TTGTTAATGGTGTTTATCAT+TGG | 0.389185 | 8.3:+4618294 | MS.gene012215:CDS |
TATTGTTGGGTTGTCTTGTA+AGG | 0.389430 | 8.3:-4617877 | None:intergenic |
CGAATCCAAGGATCATATAA+AGG | 0.390815 | 8.3:-4618992 | None:intergenic |
TTGGATTCGATGCAACAGTA+TGG | 0.392402 | 8.3:+4619006 | MS.gene012215:CDS |
AGCCACGGCACCGCAAGAAC+AGG | 0.395166 | 8.3:-4619287 | None:intergenic |
CACTTCTACCAGTGTGATAT+GGG | 0.406903 | 8.3:-4618253 | None:intergenic |
AATTGTGGTCATTATGGTTA+GGG | 0.411313 | 8.3:-4618325 | None:intergenic |
GATAGAATGAGTAAGAGCTT+TGG | 0.422097 | 8.3:+4617648 | None:intergenic |
TTTCTATTGGTGTTATTGTT+GGG | 0.425592 | 8.3:-4617890 | None:intergenic |
TTGATCGTGCATCTGCTGTT+TGG | 0.426616 | 8.3:+4619086 | MS.gene012215:CDS |
AAACAATCAATTTCAACTAC+TGG | 0.426998 | 8.3:+4618373 | MS.gene012215:CDS |
TTTGATCAGATACCACTATA+GGG | 0.427854 | 8.3:-4621478 | None:intergenic |
TCAGGTATCGCTGAGATTAA+CGG | 0.436108 | 8.3:+4623488 | MS.gene012215:intron |
GGTTAAGAATCAACAAGGTT+GGG | 0.438242 | 8.3:+4623556 | MS.gene012215:CDS |
GTTGTACGTGTTCTTTCAAA+GGG | 0.440187 | 8.3:+4623622 | MS.gene012215:CDS |
AGACTCCCTACTTCGTTAAG+AGG | 0.441446 | 8.3:+4617763 | MS.gene012215:CDS |
CGGTCAAAAGGTGCTCGATC+TGG | 0.442454 | 8.3:+4619700 | MS.gene012215:CDS |
TTTGACGAGTTTGAATTCAT+TGG | 0.444244 | 8.3:-4618114 | None:intergenic |
CCTCCGGGTTATCGGTCAAA+AGG | 0.445505 | 8.3:+4619688 | MS.gene012215:CDS |
ACCCGGAGGAAAACCATGTT+TGG | 0.446750 | 8.3:-4619674 | None:intergenic |
ATAGTTTCTGAAGGGATACT+AGG | 0.447983 | 8.3:-4618230 | None:intergenic |
AAGAATGATGTTCAAGTCCT+TGG | 0.448277 | 8.3:+4623646 | MS.gene012215:CDS |
GATACTAGGGCAAGGGATAA+GGG | 0.448796 | 8.3:-4618216 | None:intergenic |
CTAGAATTAAAATTCTTAGC+AGG | 0.448872 | 8.3:-4619544 | None:intergenic |
TTAGAAGCTCTAGTAGGAAC+AGG | 0.454194 | 8.3:-4621512 | None:intergenic |
TTCCCATAATGATTTCAATT+GGG | 0.455117 | 8.3:-4619218 | None:intergenic |
AGAATGAGTAAGAGCTTTGG+AGG | 0.465302 | 8.3:+4617651 | None:intergenic |
GGGTTAAGAATCAACAAGGT+TGG | 0.473205 | 8.3:+4623555 | MS.gene012215:CDS |
CAACTATGTCAACAGAAGGT+TGG | 0.479617 | 8.3:-4618043 | None:intergenic |
CATGTGCCTCTTAACGAAGT+AGG | 0.483046 | 8.3:-4617769 | None:intergenic |
TGCCGAAAACAATATGGAAC+TGG | 0.483604 | 8.3:-4618401 | None:intergenic |
TGCGTTCTTGTTGCAACACT+AGG | 0.487994 | 8.3:-4619438 | None:intergenic |
TGTTGTACGTGTTCTTTCAA+AGG | 0.488127 | 8.3:+4623621 | MS.gene012215:CDS |
GCTTTATGTAACGCGGGTAA+AGG | 0.489783 | 8.3:-4619409 | None:intergenic |
ACAAGGTGCGATGGCTATGC+AGG | 0.491588 | 8.3:+4619498 | MS.gene012215:CDS |
TGCGTTTCAAATGTGTCAAA+CGG | 0.496796 | 8.3:+4617721 | MS.gene012215:CDS |
TCGTTCTCAAATAATGATGA+TGG | 0.500600 | 8.3:+4619384 | MS.gene012215:CDS |
CATGTACCTCCTTAGTGGTC+GGG | 0.506953 | 8.3:-4618013 | None:intergenic |
AAGAACATGTACCTCCTTAG+TGG | 0.507758 | 8.3:-4618018 | None:intergenic |
ATGATCATAACAATAAATCA+TGG | 0.511615 | 8.3:+4618192 | MS.gene012215:CDS |
AGTACTGGTGGTCGAGGCAG+AGG | 0.511938 | 8.3:+4619565 | MS.gene012215:CDS |
CTTGTAAGGAGAGAATCGTT+AGG | 0.513160 | 8.3:-4617863 | None:intergenic |
AAAGGTGCTCGATCTGGCAA+TGG | 0.514515 | 8.3:+4619706 | MS.gene012215:CDS |
AAGGTGCTCGATCTGGCAAT+GGG | 0.519377 | 8.3:+4619707 | MS.gene012215:CDS |
GGAGTAGCCGGACATATTGA+AGG | 0.522345 | 8.3:-4621341 | None:intergenic |
CATATTGAAGGAAAATTTGG+AGG | 0.523190 | 8.3:-4621329 | None:intergenic |
TTCTCCGACAGTCCCTATAG+TGG | 0.531034 | 8.3:+4621466 | MS.gene012215:CDS |
ATGTGCCTCTTAACGAAGTA+GGG | 0.531144 | 8.3:-4617768 | None:intergenic |
TGTGCAATTCCCTGTTCTTG+CGG | 0.531894 | 8.3:+4619277 | MS.gene012215:CDS |
TTTGGCTTCTACTACAGATG+TGG | 0.540101 | 8.3:+4619741 | MS.gene012215:CDS |
TTTGTGTCCACCTTCTTCCA+AGG | 0.540661 | 8.3:-4623663 | None:intergenic |
ATGATCGATGTTGTAAAGAC+GGG | 0.541216 | 8.3:-4621586 | None:intergenic |
TGGAAGTCCTGAAGATAGCT+TGG | 0.543141 | 8.3:-4621551 | None:intergenic |
TGCTCCTTTGGTCATTGCAA+GGG | 0.544439 | 8.3:+4617942 | MS.gene012215:CDS |
ATGCTCCTTTGGTCATTGCA+AGG | 0.545465 | 8.3:+4617941 | MS.gene012215:CDS |
TAAGATTTCTGATCTTCAAG+AGG | 0.545519 | 8.3:+4619147 | MS.gene012215:CDS |
AATTCTAGTACTGGTGGTCG+AGG | 0.546260 | 8.3:+4619559 | MS.gene012215:CDS |
TCCCTGTTCTTGCGGTGCCG+TGG | 0.546445 | 8.3:+4619285 | MS.gene012215:CDS |
ATGTTCAAGTCCTTGGAAGA+AGG | 0.547835 | 8.3:+4623653 | MS.gene012215:CDS |
TAAAGCAATGTTTATGACGA+TGG | 0.548120 | 8.3:-4618145 | None:intergenic |
TCAAATGTGTCAAACGGTCA+TGG | 0.548447 | 8.3:+4617727 | MS.gene012215:CDS |
GATGATCGATGTTGTAAAGA+CGG | 0.551020 | 8.3:-4621587 | None:intergenic |
ATTCTGTTAGAAGCTCTAGT+AGG | 0.552622 | 8.3:-4621518 | None:intergenic |
TTGTAAGGAGAGAATCGTTA+GGG | 0.558622 | 8.3:-4617862 | None:intergenic |
TGTGTTCTTAAATTCCTCAA+AGG | 0.559489 | 8.3:+4619337 | MS.gene012215:CDS |
GAAATGCTTCGATTAAATCA+AGG | 0.560119 | 8.3:+4619169 | MS.gene012215:CDS |
GACACTTGTTATGCCAAACA+TGG | 0.565747 | 8.3:+4619661 | MS.gene012215:CDS |
GCGTTCTTGTTGCAACACTA+GGG | 0.566794 | 8.3:-4619437 | None:intergenic |
GAAACAGTTAAAGGAGTAGC+CGG | 0.568401 | 8.3:-4621353 | None:intergenic |
AGGAGAGGATGTTAAAATTG+TGG | 0.568698 | 8.3:-4618340 | None:intergenic |
CTGCATTAGCAGAAACAGAA+TGG | 0.572041 | 8.3:-4621385 | None:intergenic |
ACATGTACCTCCTTAGTGGT+CGG | 0.584242 | 8.3:-4618014 | None:intergenic |
TGATATGGGATAGTTTCTGA+AGG | 0.587164 | 8.3:-4618239 | None:intergenic |
TAGTTTCTGAAGGGATACTA+GGG | 0.588976 | 8.3:-4618229 | None:intergenic |
GCCACGGCACCGCAAGAACA+GGG | 0.591299 | 8.3:-4619286 | None:intergenic |
ACTTCAACTATGTCAACAGA+AGG | 0.593607 | 8.3:-4618047 | None:intergenic |
ATACTGTTGCATCGAATCCA+AGG | 0.596330 | 8.3:-4619004 | None:intergenic |
AGTTCGACTAACATAAGCAA+GGG | 0.598784 | 8.3:-4623513 | None:intergenic |
TCTAGTAGGAACAGGAACAT+TGG | 0.599622 | 8.3:-4621504 | None:intergenic |
GATATTGCACAAATTGTGAA+AGG | 0.601637 | 8.3:+4619623 | MS.gene012215:CDS |
ACAAAATGAACAAGGTGCGA+TGG | 0.607271 | 8.3:+4619489 | MS.gene012215:CDS |
GCAACAGTATGGTTCTCGCA+TGG | 0.610887 | 8.3:+4619017 | MS.gene012215:CDS |
TTCAAGTCCTTGGAAGAAGG+TGG | 0.611572 | 8.3:+4623656 | MS.gene012215:CDS |
CTGAAGGGATACTAGGGCAA+GGG | 0.614619 | 8.3:-4618223 | None:intergenic |
TCTGAAGGGATACTAGGGCA+AGG | 0.614794 | 8.3:-4618224 | None:intergenic |
CACTAACGTCAGAATCAAGT+GGG | 0.627852 | 8.3:-4623600 | None:intergenic |
ATCGATGTTGTAAAGACGGG+AGG | 0.630939 | 8.3:-4621583 | None:intergenic |
GAATTCAAACTCGTCAAAGT+CGG | 0.632194 | 8.3:+4618119 | MS.gene012215:CDS |
ACACTAACGTCAGAATCAAG+TGG | 0.638041 | 8.3:-4623601 | None:intergenic |
TTTGTGGAACCCGACCACTA+AGG | 0.638887 | 8.3:+4618004 | MS.gene012215:CDS |
TACACCCTTGCAATGACCAA+AGG | 0.639440 | 8.3:-4617946 | None:intergenic |
AAGTTCGACTAACATAAGCA+AGG | 0.640680 | 8.3:-4623514 | None:intergenic |
GACCTCTACCAAAATTTCTG+CGG | 0.642704 | 8.3:-4619588 | None:intergenic |
ATTTGGGTTAAGAATCAACA+AGG | 0.647518 | 8.3:+4623551 | MS.gene012215:CDS |
GTGGAACCCGACCACTAAGG+AGG | 0.647749 | 8.3:+4618007 | MS.gene012215:CDS |
AACAAGATGAAATTTGTCGA+CGG | 0.649720 | 8.3:+4618941 | MS.gene012215:CDS |
GATACCACTATAGGGACTGT+CGG | 0.654160 | 8.3:-4621470 | None:intergenic |
TGGAGACAGAGATATTAGCG+AGG | 0.660001 | 8.3:+4617679 | MS.gene012215:CDS |
AAGACGGGAGGAGACTGCAG+TGG | 0.662283 | 8.3:-4621571 | None:intergenic |
GATATGGGATAGTTTCTGAA+GGG | 0.663277 | 8.3:-4618238 | None:intergenic |
GAAACTATCCCATATCACAC+TGG | 0.686338 | 8.3:+4618245 | MS.gene012215:CDS |
TATAATAGGACGAAATGTCG+AGG | 0.692057 | 8.3:-4619195 | None:intergenic |
GTTGATAGACAAAATGAACA+AGG | 0.700558 | 8.3:+4619481 | MS.gene012215:CDS |
ACTATGTCAACAGAAGGTTG+GGG | 0.720534 | 8.3:-4618041 | None:intergenic |
TTGTACGTGTTCTTTCAAAG+GGG | 0.744543 | 8.3:+4623623 | MS.gene012215:CDS |
TATAAAGGATCAGAAACACG+AGG | 0.753374 | 8.3:-4618977 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGAATCTTTTTTTTTTTTTT+TGG | - | chr8.3:4618748-4618767 | None:intergenic | 10.0% |
!! | AATATAATTACAAGAAATGT+TGG | - | chr8.3:4620331-4620350 | None:intergenic | 15.0% |
!! | CAAGTGTTAAAAAATATTTA+TGG | - | chr8.3:4620638-4620657 | None:intergenic | 15.0% |
!! | CATTATTTGTTTAAAGATTT+GGG | + | chr8.3:4622967-4622986 | MS.gene012215:intron | 15.0% |
!!! | ATCTTTTTTTTTTTTTTTGG+TGG | - | chr8.3:4618745-4618764 | None:intergenic | 15.0% |
!! | AGAATGTGTCAATTAATTAT+AGG | - | chr8.3:4618441-4618460 | None:intergenic | 20.0% |
!! | ATAAGAAATAAAATGTTGGA+TGG | - | chr8.3:4620001-4620020 | None:intergenic | 20.0% |
!! | ATATTGCAAAATCTATCATT+TGG | + | chr8.3:4619062-4619081 | MS.gene012215:CDS | 20.0% |
!! | ATCATCTTTCTTAACAAATA+AGG | - | chr8.3:4622257-4622276 | None:intergenic | 20.0% |
!! | ATGATCATAACAATAAATCA+TGG | + | chr8.3:4618192-4618211 | MS.gene012215:CDS | 20.0% |
!! | ATTAAATTGACGTTAAAATG+AGG | - | chr8.3:4620138-4620157 | None:intergenic | 20.0% |
!! | GCATTATTTGTTTAAAGATT+TGG | + | chr8.3:4622966-4622985 | MS.gene012215:intron | 20.0% |
!!! | AAGAATTTTAATTCTAGTAC+TGG | + | chr8.3:4619550-4619569 | MS.gene012215:CDS | 20.0% |
!!! | GTATTTTTTGTTTAGCATAA+TGG | - | chr8.3:4620521-4620540 | None:intergenic | 20.0% |
!!! | TAAATCAGTTAAGTCATTTT+TGG | + | chr8.3:4622345-4622364 | MS.gene012215:intron | 20.0% |
!!! | TAATGATAAGGTAATTTGTA+AGG | - | chr8.3:4618476-4618495 | None:intergenic | 20.0% |
!!! | TTTTGAAACAATACTTCATA+AGG | - | chr8.3:4621032-4621051 | None:intergenic | 20.0% |
! | AAAATTAAACATAATGCCGA+TGG | + | chr8.3:4621857-4621876 | MS.gene012215:intron | 25.0% |
! | AAACAATCAATTTCAACTAC+TGG | + | chr8.3:4618373-4618392 | MS.gene012215:CDS | 25.0% |
! | AAACAGAAAAATCAGATACT+GGG | - | chr8.3:4620356-4620375 | None:intergenic | 25.0% |
! | AAAGTTCATGATATGATTTC+TGG | - | chr8.3:4620715-4620734 | None:intergenic | 25.0% |
! | AACTACAATACTCTTGTTAA+TGG | + | chr8.3:4618281-4618300 | MS.gene012215:CDS | 25.0% |
! | AATAAAATGTTGGATGGAAA+AGG | - | chr8.3:4619995-4620014 | None:intergenic | 25.0% |
! | AATAGAAAGATGCCAAAAAT+TGG | - | chr8.3:4620952-4620971 | None:intergenic | 25.0% |
! | ATACCCAATTGAAATCATTA+TGG | + | chr8.3:4619215-4619234 | MS.gene012215:CDS | 25.0% |
! | ATGAGATTTAAATGGAACAA+AGG | - | chr8.3:4620478-4620497 | None:intergenic | 25.0% |
! | ATTAAGAAAGAAGAGAAATG+GGG | - | chr8.3:4618633-4618652 | None:intergenic | 25.0% |
! | CATTAAGAAAGAAGAGAAAT+GGG | - | chr8.3:4618634-4618653 | None:intergenic | 25.0% |
! | CCATGACAAATTAAATTGAA+AGG | - | chr8.3:4618772-4618791 | None:intergenic | 25.0% |
! | CTAGAATTAAAATTCTTAGC+AGG | - | chr8.3:4619547-4619566 | None:intergenic | 25.0% |
! | GAAGAATTTACAGATGAAAA+TGG | - | chr8.3:4621260-4621279 | None:intergenic | 25.0% |
! | GATCATTCTCATGAAAAATA+AGG | + | chr8.3:4620683-4620702 | MS.gene012215:intron | 25.0% |
! | GATTTAAAAACTGTTGAAAC+TGG | - | chr8.3:4619822-4619841 | None:intergenic | 25.0% |
! | GGTATATTGTGACAATAAAT+CGG | + | chr8.3:4623014-4623033 | MS.gene012215:intron | 25.0% |
! | GGTGATAAGAAATAAAATGT+TGG | - | chr8.3:4620005-4620024 | None:intergenic | 25.0% |
! | TAAGATAAGGAAGATGATAT+AGG | - | chr8.3:4621635-4621654 | None:intergenic | 25.0% |
! | TAATTATGAGGCAATACATA+AGG | - | chr8.3:4618522-4618541 | None:intergenic | 25.0% |
! | TACCCAATTGAAATCATTAT+GGG | + | chr8.3:4619216-4619235 | MS.gene012215:CDS | 25.0% |
! | TAGAAATGTAATATTCCATG+AGG | + | chr8.3:4621226-4621245 | MS.gene012215:intron | 25.0% |
! | TCATTAAGAAAGAAGAGAAA+TGG | - | chr8.3:4618635-4618654 | None:intergenic | 25.0% |
! | TCTAATAGTAGCTAATTATG+AGG | - | chr8.3:4618534-4618553 | None:intergenic | 25.0% |
! | TGAAATATATCGTCCAATTA+GGG | + | chr8.3:4619246-4619265 | MS.gene012215:CDS | 25.0% |
! | TGAGATTTAAATGGAACAAA+GGG | - | chr8.3:4620477-4620496 | None:intergenic | 25.0% |
! | TGATTTCAATTGGGTATAAT+AGG | - | chr8.3:4619212-4619231 | None:intergenic | 25.0% |
! | TGTTAAAATTGTGGTCATTA+TGG | - | chr8.3:4618334-4618353 | None:intergenic | 25.0% |
! | TTCCCATAATGATTTCAATT+GGG | - | chr8.3:4619221-4619240 | None:intergenic | 25.0% |
! | TTGAAATATATCGTCCAATT+AGG | + | chr8.3:4619245-4619264 | MS.gene012215:CDS | 25.0% |
! | TTGTTAATGGTGTTTATCAT+TGG | + | chr8.3:4618294-4618313 | MS.gene012215:CDS | 25.0% |
!! | AAATCTTTGAGAAGTGATAA+TGG | + | chr8.3:4620771-4620790 | MS.gene012215:intron | 25.0% |
!! | AAATTTTCCTTCAATATGTC+CGG | + | chr8.3:4621334-4621353 | MS.gene012215:CDS | 25.0% |
!! | AAGTTTACAAGCTTGTTTAA+AGG | - | chr8.3:4621723-4621742 | None:intergenic | 25.0% |
!! | ACATTGTGAATGATAATGTT+TGG | - | chr8.3:4620105-4620124 | None:intergenic | 25.0% |
!! | AGGTAATTTGTAAGGTTATA+AGG | - | chr8.3:4618468-4618487 | None:intergenic | 25.0% |
!! | ATGATAGATTTTGCAATATC+AGG | - | chr8.3:4619061-4619080 | None:intergenic | 25.0% |
!! | CTTAACTGATTTAATTTCGA+AGG | - | chr8.3:4622338-4622357 | None:intergenic | 25.0% |
!! | GTAGTTGAAATTGATTGTTT+TGG | - | chr8.3:4618373-4618392 | None:intergenic | 25.0% |
!! | TTGGAAAAGATGTTTTCTAT+TGG | - | chr8.3:4617906-4617925 | None:intergenic | 25.0% |
!! | TTTTCTGCATTATCAATGAA+AGG | - | chr8.3:4621413-4621432 | None:intergenic | 25.0% |
!! | TTTTGTTCTATGATTGTGTA+AGG | - | chr8.3:4621108-4621127 | None:intergenic | 25.0% |
!!! | AAGTTTTTTTCACATTCATC+AGG | + | chr8.3:4618654-4618673 | MS.gene012215:intron | 25.0% |
!!! | AATTTTAATTCTAGTACTGG+TGG | + | chr8.3:4619553-4619572 | MS.gene012215:CDS | 25.0% |
!!! | ACTTCTCAAAGATTTTAACT+TGG | - | chr8.3:4620766-4620785 | None:intergenic | 25.0% |
!!! | AGTTTTTTTCACATTCATCA+TGG | + | chr8.3:4618655-4618674 | MS.gene012215:intron | 25.0% |
!!! | CATGATTTTTTTCTTGCTAA+AGG | + | chr8.3:4620810-4620829 | MS.gene012215:intron | 25.0% |
!!! | CATTGATAATGCAGAAAATT+CGG | + | chr8.3:4621415-4621434 | MS.gene012215:CDS | 25.0% |
!!! | CCTTTCAATTTAATTTGTCA+TGG | + | chr8.3:4618769-4618788 | MS.gene012215:intron | 25.0% |
!!! | TTATGTTAGTCGAACTTTTT+TGG | + | chr8.3:4623520-4623539 | MS.gene012215:CDS | 25.0% |
!!! | TTTCTATTGGTGTTATTGTT+GGG | - | chr8.3:4617893-4617912 | None:intergenic | 25.0% |
!!! | TTTTCTATTGGTGTTATTGT+TGG | - | chr8.3:4617894-4617913 | None:intergenic | 25.0% |
AAAGGGAAATTGTGTAGAAA+TGG | - | chr8.3:4620460-4620479 | None:intergenic | 30.0% | |
AAATTGTGGTCATTATGGTT+AGG | - | chr8.3:4618329-4618348 | None:intergenic | 30.0% | |
AACAAAATGGAATTGTTGAG+AGG | + | chr8.3:4620868-4620887 | MS.gene012215:intron | 30.0% | |
AACAAAATTATCCAAGGTAG+GGG | - | chr8.3:4621297-4621316 | None:intergenic | 30.0% | |
AACAAGATGAAATTTGTCGA+CGG | + | chr8.3:4618941-4618960 | MS.gene012215:CDS | 30.0% | |
AAGCTTGTAAACTTGATTGT+TGG | + | chr8.3:4621729-4621748 | MS.gene012215:intron | 30.0% | |
AATTCTGCAAAATGGAACAA+TGG | - | chr8.3:4620215-4620234 | None:intergenic | 30.0% | |
AATTCTTGCCATCTAACAAT+GGG | - | chr8.3:4618877-4618896 | None:intergenic | 30.0% | |
AATTGTGGTCATTATGGTTA+GGG | - | chr8.3:4618328-4618347 | None:intergenic | 30.0% | |
ACCAAGAAAAACACAATATC+CGG | - | chr8.3:4622839-4622858 | None:intergenic | 30.0% | |
AGAAACAATCAACAGTTTCT+CGG | + | chr8.3:4622884-4622903 | MS.gene012215:intron | 30.0% | |
AGAACAAAATTATCCAAGGT+AGG | - | chr8.3:4621299-4621318 | None:intergenic | 30.0% | |
AGTTTATATGTCATTACCTC+CGG | + | chr8.3:4622078-4622097 | MS.gene012215:intron | 30.0% | |
ATGGCAAGAATTATCATTCA+TGG | + | chr8.3:4618885-4618904 | MS.gene012215:CDS | 30.0% | |
ATTCAGTTCATCTCATTAAC+CGG | + | chr8.3:4620976-4620995 | MS.gene012215:intron | 30.0% | |
ATTGGTATAGCTAAGAAGAA+GGG | + | chr8.3:4620249-4620268 | MS.gene012215:intron | 30.0% | |
CAAACAGAAAAATCAGATAC+TGG | - | chr8.3:4620357-4620376 | None:intergenic | 30.0% | |
CAGTAGCTATCTTAATGATA+AGG | - | chr8.3:4618488-4618507 | None:intergenic | 30.0% | |
CATATTGAAGGAAAATTTGG+AGG | - | chr8.3:4621332-4621351 | None:intergenic | 30.0% | |
CTTCAATACTTTGGCATAAT+AGG | + | chr8.3:4620403-4620422 | MS.gene012215:intron | 30.0% | |
CTTCCCATAATGATTTCAAT+TGG | - | chr8.3:4619222-4619241 | None:intergenic | 30.0% | |
GAAAAAGCTGAAGAATTGAT+TGG | + | chr8.3:4618071-4618090 | MS.gene012215:CDS | 30.0% | |
GAAATGCTTCGATTAAATCA+AGG | + | chr8.3:4619169-4619188 | MS.gene012215:CDS | 30.0% | |
GAACAAAATTATCCAAGGTA+GGG | - | chr8.3:4621298-4621317 | None:intergenic | 30.0% | |
GATATTGCACAAATTGTGAA+AGG | + | chr8.3:4619623-4619642 | MS.gene012215:CDS | 30.0% | |
GCTTGAAAATGAACTTCATT+TGG | - | chr8.3:4622682-4622701 | None:intergenic | 30.0% | |
GGACATATTGAAGGAAAATT+TGG | - | chr8.3:4621335-4621354 | None:intergenic | 30.0% | |
TAAAGCAATGTTTATGACGA+TGG | - | chr8.3:4618148-4618167 | None:intergenic | 30.0% | |
TAAAGTTCTTCGATACCTTA+AGG | + | chr8.3:4622708-4622727 | MS.gene012215:intron | 30.0% | |
TAAGATTTCTGATCTTCAAG+AGG | + | chr8.3:4619147-4619166 | MS.gene012215:CDS | 30.0% | |
TAAGCATACGGATCATTATA+AGG | - | chr8.3:4622568-4622587 | None:intergenic | 30.0% | |
TAATTCTTGCCATCTAACAA+TGG | - | chr8.3:4618878-4618897 | None:intergenic | 30.0% | |
TATTGAAGACTTGTCAACTT+GGG | - | chr8.3:4620391-4620410 | None:intergenic | 30.0% | |
TCGTTCTCAAATAATGATGA+TGG | + | chr8.3:4619384-4619403 | MS.gene012215:CDS | 30.0% | |
TGATTTCCATGAAATCAAAG+AGG | - | chr8.3:4622863-4622882 | None:intergenic | 30.0% | |
TGCAGATGATGATAATTGTT+TGG | - | chr8.3:4623184-4623203 | None:intergenic | 30.0% | |
TGGAAGAACAAAATTATCCA+AGG | - | chr8.3:4621303-4621322 | None:intergenic | 30.0% | |
TGTGTTCTTAAATTCCTCAA+AGG | + | chr8.3:4619337-4619356 | MS.gene012215:CDS | 30.0% | |
TTGACAAGTCTTCAATACTT+TGG | + | chr8.3:4620394-4620413 | MS.gene012215:intron | 30.0% | |
TTTGACGAGTTTGAATTCAT+TGG | - | chr8.3:4618117-4618136 | None:intergenic | 30.0% | |
TTTGATCAGATACCACTATA+GGG | - | chr8.3:4621481-4621500 | None:intergenic | 30.0% | |
! | AAACTGGGACAGATTTTATA+TGG | - | chr8.3:4620026-4620045 | None:intergenic | 30.0% |
! | AGAAAGTAGAGCAATTTTCA+TGG | - | chr8.3:4618918-4618937 | None:intergenic | 30.0% |
! | ATTTGGGTTAAGAATCAACA+AGG | + | chr8.3:4623551-4623570 | MS.gene012215:CDS | 30.0% |
! | GAAGAATGTGTATTGCTATT+AGG | - | chr8.3:4620552-4620571 | None:intergenic | 30.0% |
! | GTTGATAGACAAAATGAACA+AGG | + | chr8.3:4619481-4619500 | MS.gene012215:CDS | 30.0% |
! | TCAACAATTCCATTTTGTTG+AGG | - | chr8.3:4620867-4620886 | None:intergenic | 30.0% |
! | TGCCATTTGGTAAAAAAACT+GGG | - | chr8.3:4620041-4620060 | None:intergenic | 30.0% |
! | TGTGTATTGCTATTAGGAAA+AGG | - | chr8.3:4620546-4620565 | None:intergenic | 30.0% |
! | TTATCATCATCTGCATTTTC+TGG | + | chr8.3:4623189-4623208 | MS.gene012215:intron | 30.0% |
! | TTCTTCTTTTACTGCTCTTT+TGG | + | chr8.3:4622276-4622295 | MS.gene012215:intron | 30.0% |
! | TTGCCATTTGGTAAAAAAAC+TGG | - | chr8.3:4620042-4620061 | None:intergenic | 30.0% |
! | TTTAAATCTTTTCCAACAGC+AGG | + | chr8.3:4619834-4619853 | MS.gene012215:intron | 30.0% |
! | TTTTGATCAGATACCACTAT+AGG | - | chr8.3:4621482-4621501 | None:intergenic | 30.0% |
!! | ACCAAAGGAGCATATTTTTA+AGG | - | chr8.3:4617934-4617953 | None:intergenic | 30.0% |
!! | ACGATTTTAGTCGTTTTACA+TGG | + | chr8.3:4620661-4620680 | MS.gene012215:intron | 30.0% |
!! | CAAAGGAGCATATTTTTAAG+GGG | - | chr8.3:4617932-4617951 | None:intergenic | 30.0% |
!! | CCAAAGGAGCATATTTTTAA+GGG | - | chr8.3:4617933-4617952 | None:intergenic | 30.0% |
!! | GCATATTTTTAAGGGGTTTT+TGG | - | chr8.3:4617925-4617944 | None:intergenic | 30.0% |
!!! | ATACTTTTTCATATCAGCCA+CGG | - | chr8.3:4619305-4619324 | None:intergenic | 30.0% |
!!! | TTGATTGTTTTGGAAGTCAA+AGG | - | chr8.3:4618363-4618382 | None:intergenic | 30.0% |
!!! | TTGTGTTTTAAAAGAGGAGT+GGG | - | chr8.3:4621005-4621024 | None:intergenic | 30.0% |
!!! | TTTTTTACCAAATGGCAACA+AGG | + | chr8.3:4620044-4620063 | MS.gene012215:intron | 30.0% |
AAAAACACCAAGCTATCTTC+AGG | + | chr8.3:4621544-4621563 | MS.gene012215:CDS | 35.0% | |
AAAATGGAAAAACGTCCTCA+TGG | - | chr8.3:4621244-4621263 | None:intergenic | 35.0% | |
AAATGATCAATCACAGAGTG+GGG | - | chr8.3:4618700-4618719 | None:intergenic | 35.0% | |
AACTATGTCAACAGAAGGTT+GGG | - | chr8.3:4618045-4618064 | None:intergenic | 35.0% | |
AACTTGAGAGATGGATCATA+GGG | - | chr8.3:4622526-4622545 | None:intergenic | 35.0% | |
AAGAATGATGTTCAAGTCCT+TGG | + | chr8.3:4623646-4623665 | MS.gene012215:CDS | 35.0% | |
AAGTTCGACTAACATAAGCA+AGG | - | chr8.3:4623517-4623536 | None:intergenic | 35.0% | |
AATTCCAACCAGAAGATGAT+TGG | + | chr8.3:4620231-4620250 | MS.gene012215:intron | 35.0% | |
ACAGAATGCTTACCATATGT+TGG | - | chr8.3:4619934-4619953 | None:intergenic | 35.0% | |
ACTTCAACTATGTCAACAGA+AGG | - | chr8.3:4618050-4618069 | None:intergenic | 35.0% | |
AGAAGCGATGAAATCTGAAT+TGG | + | chr8.3:4621754-4621773 | MS.gene012215:intron | 35.0% | |
AGATTGCACAAGTCTCTTTA+TGG | + | chr8.3:4622145-4622164 | MS.gene012215:intron | 35.0% | |
AGGAGAGGATGTTAAAATTG+TGG | - | chr8.3:4618343-4618362 | None:intergenic | 35.0% | |
AGTTCGACTAACATAAGCAA+GGG | - | chr8.3:4623516-4623535 | None:intergenic | 35.0% | |
AGTTGCTTCATGCTGATATT+TGG | + | chr8.3:4620583-4620602 | MS.gene012215:intron | 35.0% | |
ATACCTCTCAATAGATCCAT+CGG | - | chr8.3:4621876-4621895 | None:intergenic | 35.0% | |
ATACTTTGGCATAATAGGCT+TGG | + | chr8.3:4620408-4620427 | MS.gene012215:intron | 35.0% | |
ATCATTATAAGGAGGAGACT+CGG | - | chr8.3:4622557-4622576 | None:intergenic | 35.0% | |
ATGATCGATGTTGTAAAGAC+GGG | - | chr8.3:4621589-4621608 | None:intergenic | 35.0% | |
ATGGTAAGCATTCTGTTACT+TGG | + | chr8.3:4619938-4619957 | MS.gene012215:intron | 35.0% | |
ATTCTTGCCATCTAACAATG+GGG | - | chr8.3:4618876-4618895 | None:intergenic | 35.0% | |
ATTGTCTACTTGCTTGTTTG+AGG | - | chr8.3:4622171-4622190 | None:intergenic | 35.0% | |
CAAATGATCAATCACAGAGT+GGG | - | chr8.3:4618701-4618720 | None:intergenic | 35.0% | |
CAATGGGAAATCTGTCAATT+TGG | + | chr8.3:4619723-4619742 | MS.gene012215:CDS | 35.0% | |
CCAAAAATTGGATGGTAGAA+AGG | - | chr8.3:4620940-4620959 | None:intergenic | 35.0% | |
CCCTTAAAAATATGCTCCTT+TGG | + | chr8.3:4617930-4617949 | MS.gene012215:CDS | 35.0% | |
CGAATCCAAGGATCATATAA+AGG | - | chr8.3:4618995-4619014 | None:intergenic | 35.0% | |
CTCTTGAACTTAATCGAACA+TGG | + | chr8.3:4621780-4621799 | MS.gene012215:intron | 35.0% | |
CTGATCCTTTATATGATCCT+TGG | + | chr8.3:4618987-4619006 | MS.gene012215:CDS | 35.0% | |
CTTGTTCATCTTCGTACATT+TGG | + | chr8.3:4621062-4621081 | MS.gene012215:intron | 35.0% | |
GAAAAGAAAAGTCCTTTAGC+AGG | - | chr8.3:4622739-4622758 | None:intergenic | 35.0% | |
GAAAGATGCCAAAAATTGGA+TGG | - | chr8.3:4620948-4620967 | None:intergenic | 35.0% | |
GAAATTGCAAGATCAAAGCA+AGG | + | chr8.3:4622421-4622440 | MS.gene012215:intron | 35.0% | |
GAATTCAAACTCGTCAAAGT+CGG | + | chr8.3:4618119-4618138 | MS.gene012215:CDS | 35.0% | |
GATATGGGATAGTTTCTGAA+GGG | - | chr8.3:4618241-4618260 | None:intergenic | 35.0% | |
GATGATCGATGTTGTAAAGA+CGG | - | chr8.3:4621590-4621609 | None:intergenic | 35.0% | |
GATTGGTATAGCTAAGAAGA+AGG | + | chr8.3:4620248-4620267 | MS.gene012215:intron | 35.0% | |
GCAAAAATGCTTATAAGCGT+CGG | - | chr8.3:4621669-4621688 | None:intergenic | 35.0% | |
GCTAGTGTTTCTTCTATTTC+TGG | + | chr8.3:4620300-4620319 | MS.gene012215:intron | 35.0% | |
GGCACAATTTGCATAAGATA+AGG | - | chr8.3:4621648-4621667 | None:intergenic | 35.0% | |
GGCGTAGAATGAGATTTAAA+TGG | - | chr8.3:4620486-4620505 | None:intergenic | 35.0% | |
GGTCAAGGTAAAATGCAAAA+TGG | - | chr8.3:4620194-4620213 | None:intergenic | 35.0% | |
GGTTAAGAATCAACAAGGTT+GGG | + | chr8.3:4623556-4623575 | MS.gene012215:CDS | 35.0% | |
GTATGTAGATGACATAGTCT+TGG | + | chr8.3:4622300-4622319 | MS.gene012215:intron | 35.0% | |
GTATTGAAGACTTGTCAACT+TGG | - | chr8.3:4620392-4620411 | None:intergenic | 35.0% | |
GTTGCTTCATGCTGATATTT+GGG | + | chr8.3:4620584-4620603 | MS.gene012215:intron | 35.0% | |
GTTGGATGGAAAAGGTTATA+TGG | - | chr8.3:4619987-4620006 | None:intergenic | 35.0% | |
GTTGTACGTGTTCTTTCAAA+GGG | + | chr8.3:4623622-4623641 | MS.gene012215:CDS | 35.0% | |
GTTTATATGTCATTACCTCC+GGG | + | chr8.3:4622079-4622098 | MS.gene012215:intron | 35.0% | |
TAGCTATACCAATCATCTTC+TGG | - | chr8.3:4620242-4620261 | None:intergenic | 35.0% | |
TATAAAGGATCAGAAACACG+AGG | - | chr8.3:4618980-4618999 | None:intergenic | 35.0% | |
TATAATAGGACGAAATGTCG+AGG | - | chr8.3:4619198-4619217 | None:intergenic | 35.0% | |
TATACCAATCATCTTCTGGT+TGG | - | chr8.3:4620238-4620257 | None:intergenic | 35.0% | |
TCAAACAAGCAAGTAGACAA+TGG | + | chr8.3:4622170-4622189 | MS.gene012215:intron | 35.0% | |
TCATCTTTGAATGAGCTTCA+AGG | + | chr8.3:4619796-4619815 | MS.gene012215:intron | 35.0% | |
TCATGTGTCAAGTTCAACTA+TGG | + | chr8.3:4619771-4619790 | MS.gene012215:intron | 35.0% | |
TCATTCGGATGCAAATAGTA+AGG | - | chr8.3:4618830-4618849 | None:intergenic | 35.0% | |
TCTCAACACAAGATCTTTGA+TGG | - | chr8.3:4620842-4620861 | None:intergenic | 35.0% | |
TCTTCTTCTTGTACCATAGA+TGG | - | chr8.3:4617834-4617853 | None:intergenic | 35.0% | |
TGAGAGTTAGAACCAGAATT+TGG | - | chr8.3:4622115-4622134 | None:intergenic | 35.0% | |
TGATATGGGATAGTTTCTGA+AGG | - | chr8.3:4618242-4618261 | None:intergenic | 35.0% | |
TGCGTTTCAAATGTGTCAAA+CGG | + | chr8.3:4617721-4617740 | MS.gene012215:CDS | 35.0% | |
TGGTAATATTTGAACGCTAC+CGG | - | chr8.3:4620085-4620104 | None:intergenic | 35.0% | |
TGTCACAATATACCATAGCA+GGG | - | chr8.3:4623008-4623027 | None:intergenic | 35.0% | |
TGTTCTATGATTGTGTAAGG+TGG | - | chr8.3:4621105-4621124 | None:intergenic | 35.0% | |
TGTTGTACGTGTTCTTTCAA+AGG | + | chr8.3:4623621-4623640 | MS.gene012215:CDS | 35.0% | |
TTGCTTCATGCTGATATTTG+GGG | + | chr8.3:4620585-4620604 | MS.gene012215:intron | 35.0% | |
TTGTAAGGAGAGAATCGTTA+GGG | - | chr8.3:4617865-4617884 | None:intergenic | 35.0% | |
TTGTACGTGTTCTTTCAAAG+GGG | + | chr8.3:4623623-4623642 | MS.gene012215:CDS | 35.0% | |
TTGTCACAATATACCATAGC+AGG | - | chr8.3:4623009-4623028 | None:intergenic | 35.0% | |
! | ACAACAGCAGGATTTTCATT+CGG | - | chr8.3:4618845-4618864 | None:intergenic | 35.0% |
! | ACCGGATATTGTGTTTTTCT+TGG | + | chr8.3:4622835-4622854 | MS.gene012215:intron | 35.0% |
! | ATAGTTTCTGAAGGGATACT+AGG | - | chr8.3:4618233-4618252 | None:intergenic | 35.0% |
! | ATTCTGTTAGAAGCTCTAGT+AGG | - | chr8.3:4621521-4621540 | None:intergenic | 35.0% |
! | CAAGCTTGTTTAAAGGTTGT+AGG | - | chr8.3:4621716-4621735 | None:intergenic | 35.0% |
! | CCTTTCTACCATCCAATTTT+TGG | + | chr8.3:4620937-4620956 | MS.gene012215:intron | 35.0% |
! | CTCCAGTTCCATATTGTTTT+CGG | + | chr8.3:4618399-4618418 | MS.gene012215:CDS | 35.0% |
! | GAAAAAGCTTTATGTAACGC+GGG | - | chr8.3:4619418-4619437 | None:intergenic | 35.0% |
! | GAATTTGGAACAATAACACC+CGG | - | chr8.3:4622100-4622119 | None:intergenic | 35.0% |
! | GCAAATAGTAAGGATTGGTA+GGG | - | chr8.3:4618820-4618839 | None:intergenic | 35.0% |
! | GGAAAAAGCTTTATGTAACG+CGG | - | chr8.3:4619419-4619438 | None:intergenic | 35.0% |
! | GTGAACAATGCTTTTCTTCA+CGG | + | chr8.3:4622040-4622059 | MS.gene012215:intron | 35.0% |
! | TAGTTTCTGAAGGGATACTA+GGG | - | chr8.3:4618232-4618251 | None:intergenic | 35.0% |
! | TATTGTTGGGTTGTCTTGTA+AGG | - | chr8.3:4617880-4617899 | None:intergenic | 35.0% |
! | TGAACAATGCTTTTCTTCAC+GGG | + | chr8.3:4622041-4622060 | MS.gene012215:intron | 35.0% |
! | TGAGAGGTATAAAGCAAGAT+TGG | + | chr8.3:4621886-4621905 | MS.gene012215:intron | 35.0% |
! | TGCAAATAGTAAGGATTGGT+AGG | - | chr8.3:4618821-4618840 | None:intergenic | 35.0% |
! | TGGTAAGCATTCTGTTACTT+GGG | + | chr8.3:4619939-4619958 | MS.gene012215:intron | 35.0% |
! | TGTTACTTGGGTATTAGACT+CGG | + | chr8.3:4619951-4619970 | MS.gene012215:intron | 35.0% |
! | TTGCATTAAGGGTTGGATTT+TGG | + | chr8.3:4622006-4622025 | MS.gene012215:intron | 35.0% |
! | TTGGTACCTCTTTGATTTCA+TGG | + | chr8.3:4622854-4622873 | MS.gene012215:intron | 35.0% |
!! | ACTTGCTTTAGCTTGCATTA+AGG | + | chr8.3:4621994-4622013 | MS.gene012215:intron | 35.0% |
!! | ATTCAAGAGTGTATTTTCGC+TGG | - | chr8.3:4622459-4622478 | None:intergenic | 35.0% |
!! | CAGTGTTGGTTGAAATTGAA+AGG | - | chr8.3:4621691-4621710 | None:intergenic | 35.0% |
!! | CTTGCTTTAGCTTGCATTAA+GGG | + | chr8.3:4621995-4622014 | MS.gene012215:intron | 35.0% |
!! | GGTGTTATTGTTCCAAATTC+TGG | + | chr8.3:4622100-4622119 | MS.gene012215:intron | 35.0% |
!! | GGTGTTTATCATTGGCTTAT+AGG | + | chr8.3:4618302-4618321 | MS.gene012215:CDS | 35.0% |
!!! | ATCGTCAAGACTTAGTTTTG+TGG | + | chr8.3:4617988-4618007 | MS.gene012215:CDS | 35.0% |
!!! | CTTGTGTTTTAAAAGAGGAG+TGG | - | chr8.3:4621006-4621025 | None:intergenic | 35.0% |
!!! | GCTGAAGAATTGATTGGTTT+TGG | + | chr8.3:4618077-4618096 | MS.gene012215:CDS | 35.0% |
!!! | GGTGTCTTGTGTTTTAAAAG+AGG | - | chr8.3:4621011-4621030 | None:intergenic | 35.0% |
!!! | GTCCCAGTTTTTTTACCAAA+TGG | + | chr8.3:4620036-4620055 | MS.gene012215:intron | 35.0% |
!!! | TGTGTTTTAAAAGAGGAGTG+GGG | - | chr8.3:4621004-4621023 | None:intergenic | 35.0% |
!!! | TTTTTTGGCGATGAGGATTT+GGG | + | chr8.3:4623535-4623554 | MS.gene012215:CDS | 35.0% |
AAACGCATCAATGACTTTGC+TGG | - | chr8.3:4617708-4617727 | None:intergenic | 40.0% | |
AAAGGTTGTAGGTTCAGTGT+TGG | - | chr8.3:4621705-4621724 | None:intergenic | 40.0% | |
AACACAGTCTTTCTTGCTCT+AGG | - | chr8.3:4621137-4621156 | None:intergenic | 40.0% | |
AAGAACATGTACCTCCTTAG+TGG | - | chr8.3:4618021-4618040 | None:intergenic | 40.0% | |
ACAAAATGAACAAGGTGCGA+TGG | + | chr8.3:4619489-4619508 | MS.gene012215:CDS | 40.0% | |
ACAATCCTTCTTTCCATGAG+CGG | + | chr8.3:4623052-4623071 | MS.gene012215:intron | 40.0% | |
ACACTAACGTCAGAATCAAG+TGG | - | chr8.3:4623604-4623623 | None:intergenic | 40.0% | |
ACCATATGTTGGAGAGGAAA+TGG | - | chr8.3:4619923-4619942 | None:intergenic | 40.0% | |
ACCATTGAAGCTCACAAGAA+AGG | - | chr8.3:4622945-4622964 | None:intergenic | 40.0% | |
ACCATTTCCTCTCCAACATA+TGG | + | chr8.3:4619919-4619938 | MS.gene012215:intron | 40.0% | |
ACTATGTCAACAGAAGGTTG+GGG | - | chr8.3:4618044-4618063 | None:intergenic | 40.0% | |
AGAATCCTATTGGATGCAAG+TGG | + | chr8.3:4621828-4621847 | MS.gene012215:intron | 40.0% | |
AGCTTTCAGATCAAGGATCT+TGG | + | chr8.3:4622373-4622392 | MS.gene012215:intron | 40.0% | |
AGTCTTGACGATGATCTTCT+TGG | - | chr8.3:4617980-4617999 | None:intergenic | 40.0% | |
ATACTGTTGCATCGAATCCA+AGG | - | chr8.3:4619007-4619026 | None:intergenic | 40.0% | |
ATAGAAGAAACACTAGCAGC+AGG | - | chr8.3:4620297-4620316 | None:intergenic | 40.0% | |
ATGAGTCGTCGATAAGCATA+CGG | - | chr8.3:4622580-4622599 | None:intergenic | 40.0% | |
ATGCTTACCATATGTTGGAG+AGG | - | chr8.3:4619929-4619948 | None:intergenic | 40.0% | |
ATGTGCCTCTTAACGAAGTA+GGG | - | chr8.3:4617771-4617790 | None:intergenic | 40.0% | |
ATGTTCAAGTCCTTGGAAGA+AGG | + | chr8.3:4623653-4623672 | MS.gene012215:CDS | 40.0% | |
CAACTATGTCAACAGAAGGT+TGG | - | chr8.3:4618046-4618065 | None:intergenic | 40.0% | |
CAACTTGAGAGATGGATCAT+AGG | - | chr8.3:4622527-4622546 | None:intergenic | 40.0% | |
CACTAACGTCAGAATCAAGT+GGG | - | chr8.3:4623603-4623622 | None:intergenic | 40.0% | |
CACTTCTACCAGTGTGATAT+GGG | - | chr8.3:4618256-4618275 | None:intergenic | 40.0% | |
CCAAATGATCAATCACAGAG+TGG | - | chr8.3:4618702-4618721 | None:intergenic | 40.0% | |
CCACTCTGTGATTGATCATT+TGG | + | chr8.3:4618699-4618718 | MS.gene012215:intron | 40.0% | |
CCATGATGCCGAAAACAATA+TGG | - | chr8.3:4618410-4618429 | None:intergenic | 40.0% | |
CGGATGCAAATAGTAAGGAT+TGG | - | chr8.3:4618825-4618844 | None:intergenic | 40.0% | |
CTAATCCGAGAAAGAATCTG+AGG | - | chr8.3:4622402-4622421 | None:intergenic | 40.0% | |
CTGCATTAGCAGAAACAGAA+TGG | - | chr8.3:4621388-4621407 | None:intergenic | 40.0% | |
CTGGTTGGAATTCTGCAAAA+TGG | - | chr8.3:4620223-4620242 | None:intergenic | 40.0% | |
CTTGAATTGTTGCAAGACAG+TGG | + | chr8.3:4622472-4622491 | MS.gene012215:intron | 40.0% | |
CTTGTAAGGAGAGAATCGTT+AGG | - | chr8.3:4617866-4617885 | None:intergenic | 40.0% | |
CTTGTTACCCCATTGTTAGA+TGG | + | chr8.3:4618866-4618885 | MS.gene012215:intron | 40.0% | |
GAAACAGTTAAAGGAGTAGC+CGG | - | chr8.3:4621356-4621375 | None:intergenic | 40.0% | |
GAAACTATCCCATATCACAC+TGG | + | chr8.3:4618245-4618264 | MS.gene012215:CDS | 40.0% | |
GAAATGGTATTAAGAGCCAC+AGG | - | chr8.3:4619907-4619926 | None:intergenic | 40.0% | |
GAAGGGAGGATTATATGTCT+TGG | + | chr8.3:4620266-4620285 | MS.gene012215:intron | 40.0% | |
GAATCATGCAACTTGAGAGA+TGG | - | chr8.3:4622535-4622554 | None:intergenic | 40.0% | |
GAATCCTATTGGATGCAAGT+GGG | + | chr8.3:4621829-4621848 | MS.gene012215:intron | 40.0% | |
GAATTAACAGATGCAGGTGT+GGG | - | chr8.3:4619871-4619890 | None:intergenic | 40.0% | |
GACCTCTACCAAAATTTCTG+CGG | - | chr8.3:4619591-4619610 | None:intergenic | 40.0% | |
GAGAAACCAGAAAGTTTGAG+TGG | - | chr8.3:4622772-4622791 | None:intergenic | 40.0% | |
GCAAAATGGAACAATGGTCA+AGG | - | chr8.3:4620209-4620228 | None:intergenic | 40.0% | |
GCAAGAAAGACTGTGTTTCT+TGG | + | chr8.3:4621140-4621159 | MS.gene012215:intron | 40.0% | |
GCATAATGGCAAATGTCACA+AGG | - | chr8.3:4620507-4620526 | None:intergenic | 40.0% | |
GCATACGGATCATTATAAGG+AGG | - | chr8.3:4622565-4622584 | None:intergenic | 40.0% | |
GGAAAATTTGGAGGATCAAC+TGG | - | chr8.3:4621323-4621342 | None:intergenic | 40.0% | |
GGACAAAAGCTTTCAGATCA+AGG | + | chr8.3:4622366-4622385 | MS.gene012215:intron | 40.0% | |
GGATACAGAGATGGTACTAA+AGG | + | chr8.3:4621161-4621180 | MS.gene012215:intron | 40.0% | |
GGGTTAAGAATCAACAAGGT+TGG | + | chr8.3:4623555-4623574 | MS.gene012215:CDS | 40.0% | |
GGTAACCTCAGATTCTTTCT+CGG | + | chr8.3:4622394-4622413 | MS.gene012215:intron | 40.0% | |
GTACGAAGATGAACAAGAGT+TGG | - | chr8.3:4621059-4621078 | None:intergenic | 40.0% | |
GTCACAATATACCATAGCAG+GGG | - | chr8.3:4623007-4623026 | None:intergenic | 40.0% | |
GTGTTTCTTGGATACAGAGA+TGG | + | chr8.3:4621152-4621171 | MS.gene012215:intron | 40.0% | |
GTTACTCGCAAATCAATGAC+CGG | + | chr8.3:4622817-4622836 | MS.gene012215:intron | 40.0% | |
GTTACTTGGGTATTAGACTC+GGG | + | chr8.3:4619952-4619971 | MS.gene012215:intron | 40.0% | |
GTTGAGACTCCTCAACAAAA+TGG | + | chr8.3:4620855-4620874 | MS.gene012215:intron | 40.0% | |
GTTGCAAGACAGTGGTAATT+TGG | + | chr8.3:4622480-4622499 | MS.gene012215:intron | 40.0% | |
TAAACCCACTTGCATCCAAT+AGG | - | chr8.3:4621836-4621855 | None:intergenic | 40.0% | |
TATGCTTATCGACGACTCAT+AGG | + | chr8.3:4622580-4622599 | MS.gene012215:intron | 40.0% | |
TCAAATGTGTCAAACGGTCA+TGG | + | chr8.3:4617727-4617746 | MS.gene012215:CDS | 40.0% | |
TCACTTCTACCAGTGTGATA+TGG | - | chr8.3:4618257-4618276 | None:intergenic | 40.0% | |
TCTAGTAGGAACAGGAACAT+TGG | - | chr8.3:4621507-4621526 | None:intergenic | 40.0% | |
TCTCGTGATCTTTCCATCTA+TGG | + | chr8.3:4617818-4617837 | MS.gene012215:CDS | 40.0% | |
TCTGCTGCAGAAACAGTTAA+AGG | - | chr8.3:4621365-4621384 | None:intergenic | 40.0% | |
TCTTCTCCACTCAAACTTTC+TGG | + | chr8.3:4622763-4622782 | MS.gene012215:intron | 40.0% | |
TGCAGAAAATTCGGCAACTT+TGG | + | chr8.3:4621424-4621443 | MS.gene012215:CDS | 40.0% | |
TGCCGAAAACAATATGGAAC+TGG | - | chr8.3:4618404-4618423 | None:intergenic | 40.0% | |
TTGGATTCGATGCAACAGTA+TGG | + | chr8.3:4619006-4619025 | MS.gene012215:CDS | 40.0% | |
! | AAAGCAAGATTGGTTGCAAG+AGG | + | chr8.3:4621896-4621915 | MS.gene012215:intron | 40.0% |
! | AAGCAAGATTGGTTGCAAGA+GGG | + | chr8.3:4621897-4621916 | MS.gene012215:intron | 40.0% |
! | AGAGGGTATACTCAAATGGA+AGG | + | chr8.3:4621914-4621933 | MS.gene012215:intron | 40.0% |
! | CCATATTGTTTTCGGCATCA+TGG | + | chr8.3:4618407-4618426 | MS.gene012215:CDS | 40.0% |
! | GAACAATGCTTTTCTTCACG+GGG | + | chr8.3:4622042-4622061 | MS.gene012215:intron | 40.0% |
! | GTGATGGAATTAACAGATGC+AGG | - | chr8.3:4619877-4619896 | None:intergenic | 40.0% |
! | TCAGGTATCGCTGAGATTAA+CGG | + | chr8.3:4623488-4623507 | MS.gene012215:intron | 40.0% |
! | TGCAAGAGGGTATACTCAAA+TGG | + | chr8.3:4621910-4621929 | MS.gene012215:intron | 40.0% |
! | TTAGAAGCTCTAGTAGGAAC+AGG | - | chr8.3:4621515-4621534 | None:intergenic | 40.0% |
! | TTTGGAACGATCTCGAGTTT+AGG | + | chr8.3:4619104-4619123 | MS.gene012215:CDS | 40.0% |
! | TTTGGCTTCTACTACAGATG+TGG | + | chr8.3:4619741-4619760 | MS.gene012215:CDS | 40.0% |
!! | ACTTTCTGGTTTCTCTGACT+CGG | + | chr8.3:4622777-4622796 | MS.gene012215:intron | 40.0% |
!! | CTCGAGTTTAGGTTTTCTCA+TGG | + | chr8.3:4619115-4619134 | MS.gene012215:CDS | 40.0% |
!! | CTTTAGCTTGCATTAAGGGT+TGG | + | chr8.3:4621999-4622018 | MS.gene012215:intron | 40.0% |
!! | GACACTTGTTATGCCAAACA+TGG | + | chr8.3:4619661-4619680 | MS.gene012215:CDS | 40.0% |
!! | TAAGAGCTTTGGAGGAGATT+TGG | + | chr8.3:4617659-4617678 | MS.gene012215:CDS | 40.0% |
!!! | CTTTTTTGGCGATGAGGATT+TGG | + | chr8.3:4623534-4623553 | MS.gene012215:CDS | 40.0% |
!!! | TGTATTTTCGCTGGTTCAAG+AGG | - | chr8.3:4622450-4622469 | None:intergenic | 40.0% |
!!! | TGTTTTGGAAGTCAAAGGAG+AGG | - | chr8.3:4618358-4618377 | None:intergenic | 40.0% |
ACAGTAGTAAGCTTTGCCAC+AGG | - | chr8.3:4621965-4621984 | None:intergenic | 45.0% | |
ACATCCATAGTCCAGCTTGA+GGG | + | chr8.3:4623238-4623257 | MS.gene012215:intron | 45.0% | |
ACATGTACCTCCTTAGTGGT+CGG | - | chr8.3:4618017-4618036 | None:intergenic | 45.0% | |
ACTGCTCATTCAAGCCTTTG+AGG | - | chr8.3:4619354-4619373 | None:intergenic | 45.0% | |
ACTGTATCCCAAAGAGAGCA+AGG | - | chr8.3:4622215-4622234 | None:intergenic | 45.0% | |
AGACTCCCTACTTCGTTAAG+AGG | + | chr8.3:4617763-4617782 | MS.gene012215:CDS | 45.0% | |
ATCGATGTTGTAAAGACGGG+AGG | - | chr8.3:4621586-4621605 | None:intergenic | 45.0% | |
ATGCCGATGGATCTATTGAG+AGG | + | chr8.3:4621870-4621889 | MS.gene012215:intron | 45.0% | |
ATGCTCCTTTGGTCATTGCA+AGG | + | chr8.3:4617941-4617960 | MS.gene012215:CDS | 45.0% | |
CAAGTGACTCGATGAGTCTT+TGG | - | chr8.3:4620167-4620186 | None:intergenic | 45.0% | |
CATGGTGTAGTTTCTGTAGC+TGG | + | chr8.3:4620612-4620631 | MS.gene012215:intron | 45.0% | |
CATGTGCCTCTTAACGAAGT+AGG | - | chr8.3:4617772-4617791 | None:intergenic | 45.0% | |
CGAAGATGAACAAGAGTTGG+AGG | - | chr8.3:4621056-4621075 | None:intergenic | 45.0% | |
CTTAAGGCTTCTCCTGCTAA+AGG | + | chr8.3:4622724-4622743 | MS.gene012215:intron | 45.0% | |
CTTTAGCAGGAGAAGCCTTA+AGG | - | chr8.3:4622726-4622745 | None:intergenic | 45.0% | |
GATACCACTATAGGGACTGT+CGG | - | chr8.3:4621473-4621492 | None:intergenic | 45.0% | |
GATACTAGGGCAAGGGATAA+GGG | - | chr8.3:4618219-4618238 | None:intergenic | 45.0% | |
GATCTCCAAGCTTGGACTTA+TGG | + | chr8.3:4623215-4623234 | MS.gene012215:intron | 45.0% | |
GATGTCCATAAGTCCAAGCT+TGG | - | chr8.3:4623223-4623242 | None:intergenic | 45.0% | |
GCACAAGTGCAATCCCTAAT+TGG | - | chr8.3:4619262-4619281 | None:intergenic | 45.0% | |
GCCTTTCTTGTGAGCTTCAA+TGG | + | chr8.3:4622941-4622960 | MS.gene012215:intron | 45.0% | |
GCGTTCTTGTTGCAACACTA+GGG | - | chr8.3:4619440-4619459 | None:intergenic | 45.0% | |
GCTACAGAAACTACACCATG+TGG | - | chr8.3:4620612-4620631 | None:intergenic | 45.0% | |
GCTTTATGTAACGCGGGTAA+AGG | - | chr8.3:4619412-4619431 | None:intergenic | 45.0% | |
GGAAAGAAGGATTGTGTGCA+AGG | - | chr8.3:4623047-4623066 | None:intergenic | 45.0% | |
GGAATTAACAGATGCAGGTG+TGG | - | chr8.3:4619872-4619891 | None:intergenic | 45.0% | |
GGATCATAGGGAGTAGAAGA+TGG | - | chr8.3:4622514-4622533 | None:intergenic | 45.0% | |
GGATGGTAGAAAGGCTTGAA+AGG | - | chr8.3:4620931-4620950 | None:intergenic | 45.0% | |
GGTATAGCTAAGAAGAAGGG+AGG | + | chr8.3:4620252-4620271 | MS.gene012215:intron | 45.0% | |
GGTATTAAGAGCCACAGGAT+TGG | - | chr8.3:4619902-4619921 | None:intergenic | 45.0% | |
TACACCCTTGCAATGACCAA+AGG | - | chr8.3:4617949-4617968 | None:intergenic | 45.0% | |
TATGTTTGATGCCCCTGCTA+TGG | + | chr8.3:4622993-4623012 | MS.gene012215:intron | 45.0% | |
TCAGCTAGTTGAGCAGAAGA+AGG | - | chr8.3:4623153-4623172 | None:intergenic | 45.0% | |
TCATCAGCCTTGCTCTCTTT+GGG | + | chr8.3:4622205-4622224 | MS.gene012215:intron | 45.0% | |
TGAAGCGGAGTATAGAGCTT+TGG | + | chr8.3:4622915-4622934 | MS.gene012215:intron | 45.0% | |
TGCGTTCTTGTTGCAACACT+AGG | - | chr8.3:4619441-4619460 | None:intergenic | 45.0% | |
TGCTCCTTTGGTCATTGCAA+GGG | + | chr8.3:4617942-4617961 | MS.gene012215:CDS | 45.0% | |
TGGAAGAAGGTGAATGAGTC+CGG | - | chr8.3:4623127-4623146 | None:intergenic | 45.0% | |
TGGAAGTCCTGAAGATAGCT+TGG | - | chr8.3:4621554-4621573 | None:intergenic | 45.0% | |
TGGACAGCAAAAGTGATGTC+AGG | - | chr8.3:4622634-4622653 | None:intergenic | 45.0% | |
TGGAGACAGAGATATTAGCG+AGG | + | chr8.3:4617679-4617698 | MS.gene012215:CDS | 45.0% | |
TGTGCAATTCCCTGTTCTTG+CGG | + | chr8.3:4619277-4619296 | MS.gene012215:CDS | 45.0% | |
TTCAAGTCCTTGGAAGAAGG+TGG | + | chr8.3:4623656-4623675 | MS.gene012215:CDS | 45.0% | |
TTCCATCACAACCAATCCTG+TGG | + | chr8.3:4619888-4619907 | MS.gene012215:intron | 45.0% | |
TTGATCGTGCATCTGCTGTT+TGG | + | chr8.3:4619086-4619105 | MS.gene012215:CDS | 45.0% | |
TTTGTGTCCACCTTCTTCCA+AGG | - | chr8.3:4623666-4623685 | None:intergenic | 45.0% | |
! | ATACAAACTGACTCAGCTGC+TGG | - | chr8.3:4622654-4622673 | None:intergenic | 45.0% |
! | ATGGTTTTCCTCCGGGTTAT+CGG | + | chr8.3:4619680-4619699 | MS.gene012215:CDS | 45.0% |
! | GTAGATGACATAGTCTTGGC+TGG | + | chr8.3:4622304-4622323 | MS.gene012215:intron | 45.0% |
! | TCTGGTTTGATCTCCAAGCT+TGG | + | chr8.3:4623207-4623226 | MS.gene012215:intron | 45.0% |
! | TGCCAAACATGGTTTTCCTC+CGG | + | chr8.3:4619672-4619691 | MS.gene012215:CDS | 45.0% |
! | TGTCAGGTCTTGTGTTAGTG+AGG | - | chr8.3:4622618-4622637 | None:intergenic | 45.0% |
! | TTTGGAACAATAACACCCGG+AGG | - | chr8.3:4622097-4622116 | None:intergenic | 45.0% |
!! | AATTCTAGTACTGGTGGTCG+AGG | + | chr8.3:4619559-4619578 | MS.gene012215:CDS | 45.0% |
!! | GTCCATAGTTGACTTGCCTA+CGG | + | chr8.3:4621802-4621821 | MS.gene012215:intron | 45.0% |
!! | TCCATAGTTGACTTGCCTAC+GGG | + | chr8.3:4621803-4621822 | MS.gene012215:intron | 45.0% |
!! | TGGTTTCTCTGACTCGGATT+GGG | + | chr8.3:4622783-4622802 | MS.gene012215:intron | 45.0% |
!!! | GTCGAACTTTTTTGGCGATG+AGG | + | chr8.3:4623528-4623547 | MS.gene012215:CDS | 45.0% |
AAGGTCTGCGCTAACATTGC+CGG | + | chr8.3:4620063-4620082 | MS.gene012215:intron | 50.0% | |
ACAGATGCAGGTGTGGGATT+AGG | - | chr8.3:4619865-4619884 | None:intergenic | 50.0% | |
ACCCGGAGGAAAACCATGTT+TGG | - | chr8.3:4619677-4619696 | None:intergenic | 50.0% | |
AGGTAGGGGATGAAGAAGTG+CGG | - | chr8.3:4621283-4621302 | None:intergenic | 50.0% | |
ATCCATAGTCCAGCTTGAGG+GGG | + | chr8.3:4623240-4623259 | MS.gene012215:intron | 50.0% | |
CACTTCTTCATCCCCTACCT+TGG | + | chr8.3:4621283-4621302 | MS.gene012215:intron | 50.0% | |
CATCCATAGTCCAGCTTGAG+GGG | + | chr8.3:4623239-4623258 | MS.gene012215:intron | 50.0% | |
CATGTACCTCCTTAGTGGTC+GGG | - | chr8.3:4618016-4618035 | None:intergenic | 50.0% | |
CCAATAGGATTCTTCCCCGT+AGG | - | chr8.3:4621821-4621840 | None:intergenic | 50.0% | |
CCTACGGGGAAGAATCCTAT+TGG | + | chr8.3:4621818-4621837 | MS.gene012215:intron | 50.0% | |
CTGAAGGGATACTAGGGCAA+GGG | - | chr8.3:4618226-4618245 | None:intergenic | 50.0% | |
GACATCCATAGTCCAGCTTG+AGG | + | chr8.3:4623237-4623256 | MS.gene012215:intron | 50.0% | |
GCAACAGTATGGTTCTCGCA+TGG | + | chr8.3:4619017-4619036 | MS.gene012215:CDS | 50.0% | |
GCTGATATTTGGGGACCACA+TGG | + | chr8.3:4620594-4620613 | MS.gene012215:intron | 50.0% | |
GGAGTAGCCGGACATATTGA+AGG | - | chr8.3:4621344-4621363 | None:intergenic | 50.0% | |
GGATACTAGGGCAAGGGATA+AGG | - | chr8.3:4618220-4618239 | None:intergenic | 50.0% | |
GTCATCAGCCTTGCTCTCTT+TGG | + | chr8.3:4622204-4622223 | MS.gene012215:intron | 50.0% | |
GTTCGAGAACGCATTCGATC+CGG | + | chr8.3:4623105-4623124 | MS.gene012215:intron | 50.0% | |
TCTGAAGGGATACTAGGGCA+AGG | - | chr8.3:4618227-4618246 | None:intergenic | 50.0% | |
TCTTCACGGGGATCTTAACG+AGG | + | chr8.3:4622054-4622073 | MS.gene012215:intron | 50.0% | |
TTAAAAGAGGAGTGGGGAGC+CGG | - | chr8.3:4620998-4621017 | None:intergenic | 50.0% | |
TTCGTCCGCTCATGGAAAGA+AGG | - | chr8.3:4623060-4623079 | None:intergenic | 50.0% | |
TTCTCCGACAGTCCCTATAG+TGG | + | chr8.3:4621466-4621485 | MS.gene012215:CDS | 50.0% | |
TTTGTGGAACCCGACCACTA+AGG | + | chr8.3:4618004-4618023 | MS.gene012215:CDS | 50.0% | |
! | AAGGTGCTCGATCTGGCAAT+GGG | + | chr8.3:4619707-4619726 | MS.gene012215:CDS | 50.0% |
! | AGAGAGTGCGAGCTACGTTA+TGG | - | chr8.3:4620908-4620927 | None:intergenic | 50.0% |
! | AGTTGAGCAGAAGAAGGCAC+TGG | - | chr8.3:4623147-4623166 | None:intergenic | 50.0% |
! | GCACCTTTTGACCGATAACC+CGG | - | chr8.3:4619694-4619713 | None:intergenic | 50.0% |
! | GCCAAACATGGTTTTCCTCC+GGG | + | chr8.3:4619673-4619692 | MS.gene012215:CDS | 50.0% |
!! | AAAGGTGCTCGATCTGGCAA+TGG | + | chr8.3:4619706-4619725 | MS.gene012215:CDS | 50.0% |
!! | AGCCACAGGATTGGTTGTGA+TGG | - | chr8.3:4619893-4619912 | None:intergenic | 50.0% |
!! | CAGAAGAAGGCACTGGAAGA+AGG | - | chr8.3:4623140-4623159 | None:intergenic | 50.0% |
!! | CCATAGTTGACTTGCCTACG+GGG | + | chr8.3:4621804-4621823 | MS.gene012215:intron | 50.0% |
!! | CTGGTTTCTCTGACTCGGAT+TGG | + | chr8.3:4622782-4622801 | MS.gene012215:intron | 50.0% |
!! | GGCCGCAGAAATTTTGGTAG+AGG | + | chr8.3:4619586-4619605 | MS.gene012215:CDS | 50.0% |
!! | TTCTCGGTCTAGCTCTGAAG+CGG | + | chr8.3:4622900-4622919 | MS.gene012215:intron | 50.0% |
ACAAGGTGCGATGGCTATGC+AGG | + | chr8.3:4619498-4619517 | MS.gene012215:CDS | 55.0% | |
CAATGTGCTTCGTCCGCTCA+TGG | - | chr8.3:4623068-4623087 | None:intergenic | 55.0% | |
CCCCGTAGGCAAGTCAACTA+TGG | - | chr8.3:4621807-4621826 | None:intergenic | 55.0% | |
CCTCCGGGTTATCGGTCAAA+AGG | + | chr8.3:4619688-4619707 | MS.gene012215:CDS | 55.0% | |
GATTAGGTGCAGCCTGCTGT+TGG | - | chr8.3:4619849-4619868 | None:intergenic | 55.0% | |
GCGCAGACCTTGTTGCCATT+TGG | - | chr8.3:4620054-4620073 | None:intergenic | 55.0% | |
GGGGTAACAAGCACAACAGC+AGG | - | chr8.3:4618857-4618876 | None:intergenic | 55.0% | |
GGTAATATGCCCCCTCAAGC+TGG | - | chr8.3:4623252-4623271 | None:intergenic | 55.0% | |
! | CCTTTTGACCGATAACCCGG+AGG | - | chr8.3:4619691-4619710 | None:intergenic | 55.0% |
! | GGCAGAGGCCGCAGAAATTT+TGG | + | chr8.3:4619580-4619599 | MS.gene012215:CDS | 55.0% |
! | GGTAGGGGATGAAGAAGTGC+GGG | - | chr8.3:4621282-4621301 | None:intergenic | 55.0% |
!! | CGGTCAAAAGGTGCTCGATC+TGG | + | chr8.3:4619700-4619719 | MS.gene012215:CDS | 55.0% |
AAGACGGGAGGAGACTGCAG+TGG | - | chr8.3:4621574-4621593 | None:intergenic | 60.0% | |
GTGGAACCCGACCACTAAGG+AGG | + | chr8.3:4618007-4618026 | MS.gene012215:CDS | 60.0% | |
TGCCCCCTCAAGCTGGACTA+TGG | - | chr8.3:4623245-4623264 | None:intergenic | 60.0% | |
!! | AGTACTGGTGGTCGAGGCAG+AGG | + | chr8.3:4619565-4619584 | MS.gene012215:CDS | 60.0% |
AGCCACGGCACCGCAAGAAC+AGG | - | chr8.3:4619290-4619309 | None:intergenic | 65.0% | |
GCCACGGCACCGCAAGAACA+GGG | - | chr8.3:4619289-4619308 | None:intergenic | 65.0% | |
! | TCCCTGTTCTTGCGGTGCCG+TGG | + | chr8.3:4619285-4619304 | MS.gene012215:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 4617654 | 4623691 | 4617654 | ID=MS.gene012215 |
chr8.3 | mRNA | 4617654 | 4623691 | 4617654 | ID=MS.gene012215.t1;Parent=MS.gene012215 |
chr8.3 | exon | 4617654 | 4618428 | 4617654 | ID=MS.gene012215.t1.exon1;Parent=MS.gene012215.t1 |
chr8.3 | CDS | 4617654 | 4618428 | 4617654 | ID=cds.MS.gene012215.t1;Parent=MS.gene012215.t1 |
chr8.3 | exon | 4618885 | 4619781 | 4618885 | ID=MS.gene012215.t1.exon2;Parent=MS.gene012215.t1 |
chr8.3 | CDS | 4618885 | 4619781 | 4618885 | ID=cds.MS.gene012215.t1;Parent=MS.gene012215.t1 |
chr8.3 | exon | 4621324 | 4621614 | 4621324 | ID=MS.gene012215.t1.exon3;Parent=MS.gene012215.t1 |
chr8.3 | CDS | 4621324 | 4621614 | 4621324 | ID=cds.MS.gene012215.t1;Parent=MS.gene012215.t1 |
chr8.3 | exon | 4623492 | 4623691 | 4623492 | ID=MS.gene012215.t1.exon4;Parent=MS.gene012215.t1 |
chr8.3 | CDS | 4623492 | 4623691 | 4623492 | ID=cds.MS.gene012215.t1;Parent=MS.gene012215.t1 |
Gene Sequence |
Protein sequence |