AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96407

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96407.t1 MTR_4g116330 54.237 236 82 2 27 262 171 380 1.19e-74 232
MS.gene96407.t1 MTR_4g116320 49.638 276 93 3 7 260 5 256 5.87e-73 224
MS.gene96407.t1 MTR_3g103020 51.667 240 87 4 26 262 165 378 1.02e-67 214
MS.gene96407.t1 MTR_6g060650 50.840 238 89 3 24 261 163 372 3.17e-64 205
MS.gene96407.t1 MTR_4g109270 50.622 241 85 5 24 262 156 364 2.78e-63 202
MS.gene96407.t1 MTR_4g117720 50.207 241 95 7 24 262 161 378 6.90e-62 199
MS.gene96407.t1 MTR_3g034180 49.798 247 88 6 25 262 270 489 3.84e-61 200
MS.gene96407.t1 MTR_4g117850 47.009 234 97 4 26 255 163 373 1.57e-60 196
MS.gene96407.t1 MTR_4g109280 49.772 219 80 5 47 262 168 359 1.90e-59 192
MS.gene96407.t1 MTR_3g034130 53.807 197 80 3 25 212 156 350 2.86e-58 189
MS.gene96407.t1 MTR_4g023130 47.881 236 86 6 25 259 111 310 1.44e-55 181
MS.gene96407.t1 MTR_4g023090 44.915 236 103 6 27 257 166 379 2.87e-55 182
MS.gene96407.t1 MTR_4g023080 46.610 236 89 6 25 259 152 351 1.63e-54 179
MS.gene96407.t1 MTR_4g122850 47.107 242 97 8 25 262 150 364 2.11e-54 180
MS.gene96407.t1 MTR_4g118380 50.500 200 76 4 24 209 165 355 2.81e-54 179
MS.gene96407.t1 MTR_4g021785 46.186 236 91 5 25 259 152 352 2.79e-53 176
MS.gene96407.t1 MTR_3g034160 47.541 244 92 5 27 261 158 374 3.60e-53 177
MS.gene96407.t1 MTR_4g094365 44.167 240 102 5 25 262 155 364 4.37e-53 176
MS.gene96407.t1 MTR_8g040935 44.889 225 99 4 41 262 6 208 1.18e-52 170
MS.gene96407.t1 MTR_8g433030 44.872 234 97 6 27 257 133 337 1.28e-51 172
MS.gene96407.t1 MTR_8g032390 44.872 234 97 6 27 257 166 370 4.90e-51 171
MS.gene96407.t1 MTR_4g116330 44.492 236 66 3 27 262 171 341 2.00e-50 169
MS.gene96407.t1 MTR_4g023070 41.365 249 105 5 25 259 146 367 4.42e-50 169
MS.gene96407.t1 MTR_4g023120 40.476 252 109 5 25 262 146 370 1.00e-47 162
MS.gene96407.t1 MTR_4g023380 43.697 238 83 5 49 262 169 379 2.50e-47 161
MS.gene96407.t1 MTR_4g117780 44.398 241 100 6 26 262 157 367 5.58e-47 160
MS.gene96407.t1 MTR_4g117770 43.568 241 102 6 26 262 157 367 1.02e-46 159
MS.gene96407.t1 MTR_4g117810 43.568 241 102 6 26 262 157 367 1.02e-46 159
MS.gene96407.t1 MTR_6g463430 42.544 228 100 6 37 262 4 202 1.62e-43 147
MS.gene96407.t1 MTR_5g070080 44.017 234 103 7 25 257 174 380 3.12e-43 151
MS.gene96407.t1 MTR_4g118400 42.723 213 76 4 47 255 123 293 4.97e-43 148
MS.gene96407.t1 MTR_5g097210 42.373 236 102 7 25 255 150 356 1.42e-42 149
MS.gene96407.t1 MTR_4g023200 42.500 240 97 8 25 259 154 357 1.95e-42 148
MS.gene96407.t1 MTR_4g023190 42.500 240 96 8 25 259 154 356 2.31e-42 148
MS.gene96407.t1 MTR_8g433040 43.983 241 93 7 25 262 163 364 3.31e-42 148
MS.gene96407.t1 MTR_8g032380 43.983 241 93 7 25 262 163 364 3.31e-42 148
MS.gene96407.t1 MTR_4g118370 38.136 236 97 5 24 255 63 253 2.19e-40 140
MS.gene96407.t1 MTR_1g055195 42.798 243 87 10 25 255 269 471 9.22e-40 144
MS.gene96407.t1 MTR_5g070088 38.723 235 118 3 25 257 170 380 1.01e-39 142
MS.gene96407.t1 MTR_4g023150 41.250 240 100 9 25 259 154 357 5.02e-39 139
MS.gene96407.t1 MTR_6g034720 71.579 95 27 0 25 119 80 174 5.16e-39 135
MS.gene96407.t1 MTR_4g117750 39.754 244 106 7 24 255 138 352 1.15e-36 135
MS.gene96407.t1 MTR_4g117750 51.852 135 41 3 123 257 368 478 2.55e-29 115
MS.gene96407.t1 MTR_1g055250 39.167 240 112 7 11 223 21 253 3.95e-36 131
MS.gene96407.t1 MTR_5g070130 36.667 240 117 6 25 255 156 369 4.17e-36 132
MS.gene96407.t1 MTR_4g117530 35.021 237 89 4 26 262 82 253 1.61e-35 127
MS.gene96407.t1 MTR_4g117870 39.076 238 83 6 25 262 92 267 4.49e-35 127
MS.gene96407.t1 MTR_4g023440 36.502 263 93 7 5 262 139 332 5.70e-35 128
MS.gene96407.t1 MTR_1g055175 37.719 228 103 8 44 262 4 201 1.82e-33 120
MS.gene96407.t1 MTR_1g055135 36.992 246 107 8 25 255 156 368 2.24e-32 122
MS.gene96407.t1 MTR_4g121580 41.148 209 75 8 25 222 164 335 1.79e-31 120
MS.gene96407.t1 MTR_7g079400 37.273 220 109 7 49 262 141 337 2.20e-31 119
MS.gene96407.t1 MTR_7g079370 37.190 242 112 10 24 255 138 349 4.21e-31 118
MS.gene96407.t1 MTR_1g055165 41.530 183 78 5 82 262 163 318 1.45e-29 113
MS.gene96407.t1 MTR_4g118360 48.344 151 50 6 113 261 1 125 2.75e-29 107
MS.gene96407.t1 MTR_5g023000 52.459 122 34 2 141 262 2 99 6.13e-28 103
MS.gene96407.t1 MTR_8g102520 33.182 220 114 5 49 262 130 322 4.19e-27 107
MS.gene96407.t1 MTR_4g114700 35.043 234 70 7 27 253 60 218 1.22e-24 99.0
MS.gene96407.t1 MTR_8g098830 35.266 207 112 7 11 211 8 198 2.11e-24 97.8
MS.gene96407.t1 MTR_4g122860 34.322 236 96 8 32 262 139 320 4.45e-24 99.4
MS.gene96407.t1 MTR_4g117430 49.565 115 49 2 25 139 49 154 1.87e-23 93.6
MS.gene96407.t1 MTR_8g013010 46.610 118 57 2 25 142 203 314 3.38e-23 96.7
MS.gene96407.t1 MTR_7g079420 34.599 237 93 9 24 255 958 1137 1.33e-22 97.4
MS.gene96407.t1 MTR_7g079450 37.423 163 65 6 97 255 1 130 2.54e-19 82.0
MS.gene96407.t1 MTR_2g048580 30.769 221 105 10 49 259 158 340 3.81e-19 85.9
MS.gene96407.t1 MTR_4g116340 53.247 77 34 1 27 103 173 247 1.77e-16 77.0
MS.gene96407.t1 MTR_7g117720 47.170 106 34 3 151 255 186 270 5.57e-15 73.2
MS.gene96407.t1 MTR_4g023430 37.255 102 43 1 161 262 142 222 1.80e-12 65.5
MS.gene96407.t1 MTR_1g055145 33.553 152 89 6 82 227 132 277 1.04e-11 63.9
MS.gene96407.t1 MTR_8g013005 46.341 82 20 2 180 261 1 58 1.76e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 51 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTATTGCATTTGATTTAA+TGG 0.159177 7.1:-56245964 MS.gene96407:CDS
GATTGGGGCTTGTGGGTATT+TGG 0.174170 7.1:-56245888 MS.gene96407:CDS
CATCTTGTTCTTCCTATTGA+TGG 0.208153 7.1:-56245771 MS.gene96407:CDS
AAAGTAGGTCTGTTCTTTAA+TGG 0.237963 7.1:-56246032 MS.gene96407:CDS
TGACCATGAGCCTAGGGATT+GGG 0.296728 7.1:-56245904 MS.gene96407:CDS
TCGTCGTCCTGATCTATTTA+TGG 0.296986 7.1:-56245991 MS.gene96407:CDS
ACGGTCACTTTGGATCTAAT+TGG 0.299760 7.1:+56245543 None:intergenic
TCTTTAATGGGTCTATTCAT+TGG 0.323982 7.1:-56246019 MS.gene96407:CDS
CTGCCTGATGATTTGTCAAT+TGG 0.325785 7.1:-56246646 MS.gene96407:CDS
TTCGTTGTAGAGTTGAAATA+TGG 0.329891 7.1:-56245833 MS.gene96407:CDS
GCCTAGGGATTGGGGCTTGT+GGG 0.346569 7.1:-56245895 MS.gene96407:CDS
AAGTAGGTCTGTTCTTTAAT+GGG 0.347992 7.1:-56246031 MS.gene96407:CDS
AATACAAAGTGCATTCATAT+TGG 0.369394 7.1:-56245800 MS.gene96407:CDS
TGATGATTACTTGGTGGTTT+CGG 0.378979 7.1:-56246183 MS.gene96407:CDS
TGGAATCTTGCAGAGGTTGC+CGG 0.403436 7.1:-56246626 MS.gene96407:intron
TAATGGGTCTATTCATTGGT+TGG 0.409383 7.1:-56246015 MS.gene96407:CDS
AGCCTAGGGATTGGGGCTTG+TGG 0.414020 7.1:-56245896 MS.gene96407:CDS
ATTAGTACGGATGGCCGAAC+TGG 0.419772 7.1:-56245696 MS.gene96407:CDS
GGCTCATGGTCAAAACAATC+TGG 0.423919 7.1:+56245915 None:intergenic
TTGACCATGAGCCTAGGGAT+TGG 0.440517 7.1:-56245905 MS.gene96407:CDS
ATTCCAATTGACAAATCATC+AGG 0.448746 7.1:+56246643 None:intergenic
TCACGTTGAGAAGTAATACT+TGG 0.449741 7.1:-56246106 MS.gene96407:CDS
CTCTGTATACACGGTCACTT+TGG 0.455301 7.1:+56245533 None:intergenic
ATAGTGGAAATGCCATCAAT+AGG 0.462081 7.1:+56245759 None:intergenic
GACCATGAGCCTAGGGATTG+GGG 0.464031 7.1:-56245903 MS.gene96407:CDS
TTGCATTTGATTTAATGGAA+TGG 0.469528 7.1:-56245959 MS.gene96407:CDS
GAGTCCCTGCTTTCACTCTC+CGG 0.477310 7.1:-56245513 MS.gene96407:CDS
AGTGATACATCCTTAGCCTT+AGG 0.480409 7.1:-56246155 MS.gene96407:CDS
TGGTCAAAACAATCTGGAAA+AGG 0.492421 7.1:+56245921 None:intergenic
ATCTCTCAGTCTATTTGCTA+AGG 0.492623 7.1:-56245862 MS.gene96407:CDS
CCAGTCAACTGATGATTACT+TGG 0.502794 7.1:-56246192 MS.gene96407:intron
TATTGGGGAAAAGAATATAG+TGG 0.504429 7.1:+56245743 None:intergenic
TATACTTCAACAATCCAGTT+CGG 0.512765 7.1:+56245682 None:intergenic
ACAACATCCATAAATAGATC+AGG 0.513968 7.1:+56245984 None:intergenic
TTGAAGTCGACCATCACAAA+AGG 0.531983 7.1:+56245629 None:intergenic
GTCAACTGATGATTACTTGG+TGG 0.533323 7.1:-56246189 MS.gene96407:CDS
AAACATTACTACTATTGTGA+TGG 0.536641 7.1:-56245573 MS.gene96407:CDS
AAACATAATACCTAAGGCTA+AGG 0.546030 7.1:+56246145 None:intergenic
GGCGACATCATTAGTACGGA+TGG 0.553968 7.1:-56245705 MS.gene96407:CDS
ACGTGAAAACATAATACCTA+AGG 0.560811 7.1:+56246139 None:intergenic
TCGTTGTAGAGTTGAAATAT+GGG 0.573217 7.1:-56245832 MS.gene96407:CDS
GTCACTAATCAGCTCAAAGT+AGG 0.581545 7.1:-56246047 MS.gene96407:CDS
AAGTGGCGACATCATTAGTA+CGG 0.586922 7.1:-56245709 MS.gene96407:CDS
AGCCCCAATCCCTAGGCTCA+TGG 0.595486 7.1:+56245901 None:intergenic
TTATACTTGCACATTAACAC+CGG 0.600834 7.1:+56245494 None:intergenic
ACCCACAAGCCCCAATCCCT+AGG 0.605519 7.1:+56245894 None:intergenic
TAACACCGGAGAGTGAAAGC+AGG 0.606570 7.1:+56245508 None:intergenic
TAATACTTGGAAAGAACTTG+AGG 0.609650 7.1:-56246093 MS.gene96407:CDS
TGTCAATTGGAATCTTGCAG+AGG 0.613128 7.1:-56246633 MS.gene96407:CDS
AACACCGGAGAGTGAAAGCA+GGG 0.645235 7.1:+56245509 None:intergenic
AAGCAGGGACTCTGTATACA+CGG 0.671507 7.1:+56245524 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGGAAAAAAGGAATATT+TGG + chr7.1:56245944-56245963 None:intergenic 20.0%
!! TTGATTGAAATAATCAGATT+GGG + chr7.1:56245800-56245819 None:intergenic 20.0%
!! TTTGATTGAAATAATCAGAT+TGG + chr7.1:56245801-56245820 None:intergenic 20.0%
!!! AAATATTCCTTTTTTCCATA+TGG - chr7.1:56245943-56245962 MS.gene96407:CDS 20.0%
!!! TGTTATTGCATTTGATTTAA+TGG - chr7.1:56246206-56246225 MS.gene96407:intron 20.0%
! AAACATTACTACTATTGTGA+TGG - chr7.1:56246597-56246616 MS.gene96407:intron 25.0%
! AAACGTATAAGATACTTTAC+CGG + chr7.1:56245566-56245585 None:intergenic 25.0%
! AATACAAAGTGCATTCATAT+TGG - chr7.1:56246370-56246389 MS.gene96407:intron 25.0%
! TGATTGAAATAATCAGATTG+GGG + chr7.1:56245799-56245818 None:intergenic 25.0%
!! TTGCATTTGATTTAATGGAA+TGG - chr7.1:56246211-56246230 MS.gene96407:intron 25.0%
!!! GATTTTGAAACATCATCATT+TGG - chr7.1:56245731-56245750 MS.gene96407:CDS 25.0%
AAACATAATACCTAAGGCTA+AGG + chr7.1:56246028-56246047 None:intergenic 30.0%
AAAGTAGGTCTGTTCTTTAA+TGG - chr7.1:56246138-56246157 MS.gene96407:CDS 30.0%
AAATCTAACGATAGTGTTTC+TGG + chr7.1:56245710-56245729 None:intergenic 30.0%
AAGTAGGTCTGTTCTTTAAT+GGG - chr7.1:56246139-56246158 MS.gene96407:CDS 30.0%
ACAACATCCATAAATAGATC+AGG + chr7.1:56246189-56246208 None:intergenic 30.0%
ACGTGAAAACATAATACCTA+AGG + chr7.1:56246034-56246053 None:intergenic 30.0%
ATTCCAATTGACAAATCATC+AGG + chr7.1:56245530-56245549 None:intergenic 30.0%
GGAATATTTGGCATCTAAAT+TGG + chr7.1:56245932-56245951 None:intergenic 30.0%
TAATACTTGGAAAGAACTTG+AGG - chr7.1:56246077-56246096 MS.gene96407:CDS 30.0%
TATACTTCAACAATCCAGTT+CGG + chr7.1:56246491-56246510 None:intergenic 30.0%
TATTGGGGAAAAGAATATAG+TGG + chr7.1:56246430-56246449 None:intergenic 30.0%
TCGTTGTAGAGTTGAAATAT+GGG - chr7.1:56246338-56246357 MS.gene96407:intron 30.0%
TTATACTTGCACATTAACAC+CGG + chr7.1:56246679-56246698 None:intergenic 30.0%
TTCGTTGTAGAGTTGAAATA+TGG - chr7.1:56246337-56246356 MS.gene96407:intron 30.0%
! ACTTTTTGTAGAGCATATTG+GGG + chr7.1:56246445-56246464 None:intergenic 30.0%
! TCTTTAATGGGTCTATTCAT+TGG - chr7.1:56246151-56246170 MS.gene96407:CDS 30.0%
!! CACTTTTTGTAGAGCATATT+GGG + chr7.1:56246446-56246465 None:intergenic 30.0%
!!! CCTTTTTTCCATATGGTTTT+CGG - chr7.1:56245950-56245969 MS.gene96407:CDS 30.0%
AGGTATTTGTTTGTGAACTC+CGG + chr7.1:56245893-56245912 None:intergenic 35.0%
CAAATTGTTAGTTCGTGTAG+AGG - chr7.1:56245817-56245836 MS.gene96407:CDS 35.0%
CATCTTGTTCTTCCTATTGA+TGG - chr7.1:56246399-56246418 MS.gene96407:intron 35.0%
CCAATATGCTCTACAAAAAG+TGG - chr7.1:56246444-56246463 MS.gene96407:intron 35.0%
CCGAAAACCATATGGAAAAA+AGG + chr7.1:56245953-56245972 None:intergenic 35.0%
GCATCTAAATTGGAATCAAG+AGG + chr7.1:56245922-56245941 None:intergenic 35.0%
GGGTTTCATAAAACTAGACT+AGG + chr7.1:56245779-56245798 None:intergenic 35.0%
TCAAATGCATTCGTAAGTCT+TGG - chr7.1:56245585-56245604 MS.gene96407:CDS 35.0%
TCACGTTGAGAAGTAATACT+TGG - chr7.1:56246064-56246083 MS.gene96407:CDS 35.0%
TGGTCAAAACAATCTGGAAA+AGG + chr7.1:56246252-56246271 None:intergenic 35.0%
! ATAGTGGAAATGCCATCAAT+AGG + chr7.1:56246414-56246433 None:intergenic 35.0%
! ATCTCTCAGTCTATTTGCTA+AGG - chr7.1:56246308-56246327 MS.gene96407:intron 35.0%
! GAACATTACACCTTTTGTGA+TGG - chr7.1:56246531-56246550 MS.gene96407:intron 35.0%
! TAATGGGTCTATTCATTGGT+TGG - chr7.1:56246155-56246174 MS.gene96407:CDS 35.0%
! TGATGATTACTTGGTGGTTT+CGG - chr7.1:56245987-56246006 MS.gene96407:CDS 35.0%
!!! CCACTTTTTGTAGAGCATAT+TGG + chr7.1:56246447-56246466 None:intergenic 35.0%
AAGTGGCGACATCATTAGTA+CGG - chr7.1:56246461-56246480 MS.gene96407:intron 40.0%
CCAAGTAATCATCAGTTGAC+TGG + chr7.1:56245981-56246000 None:intergenic 40.0%
CCAGTCAACTGATGATTACT+TGG - chr7.1:56245978-56245997 MS.gene96407:CDS 40.0%
GTCAACTGATGATTACTTGG+TGG - chr7.1:56245981-56246000 MS.gene96407:CDS 40.0%
GTCACTAATCAGCTCAAAGT+AGG - chr7.1:56246123-56246142 MS.gene96407:CDS 40.0%
TATTTGTTTGTGAACTCCGG+TGG + chr7.1:56245890-56245909 None:intergenic 40.0%
TCGTCGTCCTGATCTATTTA+TGG - chr7.1:56246179-56246198 MS.gene96407:CDS 40.0%
TGGTCATACCGAAAACCATA+TGG + chr7.1:56245961-56245980 None:intergenic 40.0%
TGTCAATTGGAATCTTGCAG+AGG - chr7.1:56245537-56245556 MS.gene96407:CDS 40.0%
TTGAAGTCGACCATCACAAA+AGG + chr7.1:56246544-56246563 None:intergenic 40.0%
TTGGAATCAAGAGGAGACAA+AGG + chr7.1:56245913-56245932 None:intergenic 40.0%
! AACTCTACGTGTGTGTTTTG+CGG + chr7.1:56245666-56245685 None:intergenic 40.0%
! ACGGTCACTTTGGATCTAAT+TGG + chr7.1:56246630-56246649 None:intergenic 40.0%
! AGTGATACATCCTTAGCCTT+AGG - chr7.1:56246015-56246034 MS.gene96407:CDS 40.0%
! CTGCCTGATGATTTGTCAAT+TGG - chr7.1:56245524-56245543 MS.gene96407:CDS 40.0%
!!! ATTGTTTTGACCATGAGCCT+AGG - chr7.1:56246259-56246278 MS.gene96407:intron 40.0%
!!! TTGTTTTGACCATGAGCCTA+GGG - chr7.1:56246260-56246279 MS.gene96407:intron 40.0%
AAGCAGGGACTCTGTATACA+CGG + chr7.1:56246649-56246668 None:intergenic 45.0%
CTCTGTATACACGGTCACTT+TGG + chr7.1:56246640-56246659 None:intergenic 45.0%
GGCTCATGGTCAAAACAATC+TGG + chr7.1:56246258-56246277 None:intergenic 45.0%
GTCGTTCAAGCTACTACCTT+TGG - chr7.1:56245857-56245876 MS.gene96407:CDS 45.0%
!! TACCTTTGGAATCCATCCAC+CGG - chr7.1:56245871-56245890 MS.gene96407:CDS 45.0%
AACACCGGAGAGTGAAAGCA+GGG + chr7.1:56246664-56246683 None:intergenic 50.0%
ATTAGTACGGATGGCCGAAC+TGG - chr7.1:56246474-56246493 MS.gene96407:intron 50.0%
GATTGGGGCTTGTGGGTATT+TGG - chr7.1:56246282-56246301 MS.gene96407:intron 50.0%
GGCGACATCATTAGTACGGA+TGG - chr7.1:56246465-56246484 MS.gene96407:intron 50.0%
TAACACCGGAGAGTGAAAGC+AGG + chr7.1:56246665-56246684 None:intergenic 50.0%
TGACCATGAGCCTAGGGATT+GGG - chr7.1:56246266-56246285 MS.gene96407:intron 50.0%
TGGAATCTTGCAGAGGTTGC+CGG - chr7.1:56245544-56245563 MS.gene96407:CDS 50.0%
TGTTTGTGAACTCCGGTGGA+TGG + chr7.1:56245886-56245905 None:intergenic 50.0%
TTGACCATGAGCCTAGGGAT+TGG - chr7.1:56246265-56246284 MS.gene96407:intron 50.0%
! TCTACGTGTGTGTTTTGCGG+CGG + chr7.1:56245663-56245682 None:intergenic 50.0%
GACCATGAGCCTAGGGATTG+GGG - chr7.1:56246267-56246286 MS.gene96407:intron 55.0%
GAGTCCCTGCTTTCACTCTC+CGG - chr7.1:56246657-56246676 MS.gene96407:CDS 55.0%
! CTCCGGTGGATGGATTCCAA+AGG + chr7.1:56245876-56245895 None:intergenic 55.0%
ACCCACAAGCCCCAATCCCT+AGG + chr7.1:56246279-56246298 None:intergenic 60.0%
AGCCCCAATCCCTAGGCTCA+TGG + chr7.1:56246272-56246291 None:intergenic 60.0%
AGCCTAGGGATTGGGGCTTG+TGG - chr7.1:56246274-56246293 MS.gene96407:intron 60.0%
GCCTAGGGATTGGGGCTTGT+GGG - chr7.1:56246275-56246294 MS.gene96407:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 56245494 56246698 56245494 ID=MS.gene96407
chr7.1 mRNA 56245494 56246698 56245494 ID=MS.gene96407.t1;Parent=MS.gene96407
chr7.1 exon 56246627 56246698 56246627 ID=MS.gene96407.t1.exon1;Parent=MS.gene96407.t1
chr7.1 CDS 56246627 56246698 56246627 ID=cds.MS.gene96407.t1;Parent=MS.gene96407.t1
chr7.1 exon 56245494 56246210 56245494 ID=MS.gene96407.t1.exon2;Parent=MS.gene96407.t1
chr7.1 CDS 56245494 56246210 56245494 ID=cds.MS.gene96407.t1;Parent=MS.gene96407.t1
Gene Sequence

>MS.gene96407

ATGGAGAAGAAGAAGAAGACATTGTATCTGCTGCCTGATGATTTGTCAATTGGAATCTTGCAGAGGTTGCCGGTAAAGTATCTTATACGTTTCAAATGCATTCGTAAGTCTTGGTTTTCTCTGATCTCTCATGATATTAATTTTGCAAATTCACATTTTCAACATACCGCCGCAAAACACACACGTAGAGTTATGTTCTTGTCAGATTCTAATCCAGAAACACTATCGTTAGATTTTGATTTTGAAACATCATCATTTGGCTATGAAACTGTTACTGAAATACCTAGTCTAGTTTTATGAAACCCCAATCTGATTATTTCAATCAAATTGTTAGTTCGTGTAGAGGCTTCATATTTTCTCATCGTCGTTCAAGCTACTACCTTTGGAATCCATCCACCGGAGTTCACAAACAAATACCTTTGTCTCCTCTTGATTCCAATTTAGATGCCAAATATTCCTTTTTTCCATATGGTTTTCGGTATGACCAGTCAACTGATGATTACTTGGTGGTTTCGGTGTACAGTGATACATCCTTAGCCTTAGGTATTATGTTTTCACGTTTGAAGTTTTTCACGTTGAGAAGTAATACTTGGAAAGAACTTGAGGCTACTCGCACTACTTATATGATTGTCACTAATCAGCTCAAAGTAGGTCTGTTCTTTAATGGGTCTATTCATTGGTTGGCTCGTCGTCCTGATCTATTTATGGATGTTGTTATTGCATTTGATTTAATGGAATGGAAACTTTTTGATATGCCTTTTCCAGATTGTTTTGACCATGAGCCTAGGGATTGGGGCTTGTGGGTATTTGGAGAATCTCTCAGTCTATTTGCTAAGGATTATGTTCGTTGTAGAGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCATATTGGACTTTGCATCTTGTTCTTCCTATTGATGGCATTTCCACTATATTCTTTTCCCCAATATGCTCTACAAAAAGTGGCGACATCATTAGTACGGATGGCCGAACTGGATTGTTGAAGTATAATGACAAAAAACAACTTATAGAACATTACACCTTTTGTGATGGTCGACTTCAAATTAGAAAGTATAATGACAATGAACAACTTATAAAACATTACTACTATTGTGATGGTTCACTTCCAATTAGATCCAAAGTGACCGTGTATACAGAGTCCCTGCTTTCACTCTCCGGTGTTAATGTGCAAGTATAA
Protein sequence

>MS.gene96407.t1

MEKKKKTLYLLPDDLSIGILQRLPSTDDYLVVSVYSDTSLALGIMFSRLKFFTLRSNTWKELEATRTTYMIVTNQLKVGLFFNGSIHWLARRPDLFMDVVIAFDLMEWKLFDMPFPDCFDHEPRDWGLWVFGESLSLFAKDYVRCRVEIWVMKEYKVHSYWTLHLVLPIDGISTIFFSPICSTKSGDIISTDGRTGLLKYNDKKQLIEHYTFCDGRLQIRKYNDNEQLIKHYYYCDGSLPIRSKVTVYTESLLSLSGVNVQV