AlfalfaGEDB | MS.gene50297

M. sativa cultivar XinJiangDaYe / MS.gene50297

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50297.t1	AES87252.1	66.2	148	26	3	1	124	232	379	4.20E-45	190.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50297.t1	G7JDC4	66.2	148	26	3	1	124	232	379	3.0e-45	190.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene41046	MS.gene50297	PPI
MS.gene87588	MS.gene50297	PPI
MS.gene017412	MS.gene50297	PPI
MS.gene80884	MS.gene50297	PPI
MS.gene50297	MS.gene58240	PPI
MS.gene50297	MS.gene27284	PPI
MS.gene50297	MS.gene063472	PPI
MS.gene51192	MS.gene50297	PPI
MS.gene009883	MS.gene50297	PPI
MS.gene50297	MS.gene57717	PPI
MS.gene50297	MS.gene034680	PPI
MS.gene50297	MS.gene48221	PPI
MS.gene044563	MS.gene50297	PPI
MS.gene069075	MS.gene50297	PPI
MS.gene50297	MS.gene044563	PPI
MS.gene033427	MS.gene50297	PPI
MS.gene50297	MS.gene50327	PPI
MS.gene50297	MS.gene066626	PPI
MS.gene40985	MS.gene50297	PPI
MS.gene041474	MS.gene50297	PPI
MS.gene27020	MS.gene50297	PPI
MS.gene50297	MS.gene063474	PPI
MS.gene50297	MS.gene51190	PPI
MS.gene50297	MS.gene044426	PPI
MS.gene50297	MS.gene88416	PPI
MS.gene50297	MS.gene034681	PPI
MS.gene50297	MS.gene51192	PPI
MS.gene041388	MS.gene50297	PPI
MS.gene50297	MS.gene57532	PPI
MS.gene50297	MS.gene003076	PPI
MS.gene062698	MS.gene50297	PPI
MS.gene57536	MS.gene50297	PPI
MS.gene96126	MS.gene50297	PPI
MS.gene51208	MS.gene50297	PPI
MS.gene016524	MS.gene50297	PPI
MS.gene50304	MS.gene50297	PPI
MS.gene50297	MS.gene009892	PPI
MS.gene045475	MS.gene50297	PPI
MS.gene88776	MS.gene50297	PPI
MS.gene50297	MS.gene058669	PPI
MS.gene50297	MS.gene066120	PPI
MS.gene90744	MS.gene50297	PPI
MS.gene51204	MS.gene50297	PPI
MS.gene31587	MS.gene50297	PPI
MS.gene036557	MS.gene50297	PPI
MS.gene041393	MS.gene50297	PPI
MS.gene50297	MS.gene041489	PPI
MS.gene50297	MS.gene40986	PPI
MS.gene50297	MS.gene034688	PPI
MS.gene50297	MS.gene24213	PPI
MS.gene50297	MS.gene033440	PPI
MS.gene84698	MS.gene50297	PPI
MS.gene50297	MS.gene034677	PPI
MS.gene50297	MS.gene055694	PPI
MS.gene066641	MS.gene50297	PPI
MS.gene82082	MS.gene50297	PPI
MS.gene50297	MS.gene035238	PPI
MS.gene50297	MS.gene85043	PPI
MS.gene000038	MS.gene50297	PPI
MS.gene50297	MS.gene064114	PPI
MS.gene50297	MS.gene87584	PPI
MS.gene50297	MS.gene062698	PPI
MS.gene57535	MS.gene50297	PPI
MS.gene025887	MS.gene50297	PPI
MS.gene50297	MS.gene80610	PPI
MS.gene041470	MS.gene50297	PPI
MS.gene87200	MS.gene50297	PPI
MS.gene50297	MS.gene90743	PPI
MS.gene50297	MS.gene85454	PPI
MS.gene015089	MS.gene50297	PPI
MS.gene50297	MS.gene064112	PPI
MS.gene50297	MS.gene041391	PPI
MS.gene44885	MS.gene50297	PPI
MS.gene011679	MS.gene50297	PPI
MS.gene50297	MS.gene033443	PPI
MS.gene060370	MS.gene50297	PPI
MS.gene066635	MS.gene50297	PPI
MS.gene50297	MS.gene57536	PPI
MS.gene57533	MS.gene50297	PPI
MS.gene50297	MS.gene51200	PPI
MS.gene010758	MS.gene50297	PPI
MS.gene87586	MS.gene50297	PPI
MS.gene50297	MS.gene058701	PPI
MS.gene50297	MS.gene87554	PPI
MS.gene50297	MS.gene009891	PPI
MS.gene50297	MS.gene064083	PPI
MS.gene40887	MS.gene50297	PPI
MS.gene50297	MS.gene048193	PPI
MS.gene50339	MS.gene50297	PPI
MS.gene50297	MS.gene58783	PPI
MS.gene50297	MS.gene024420	PPI
MS.gene50297	MS.gene016220	PPI
MS.gene50297	MS.gene024008	PPI
MS.gene50297	MS.gene50337	PPI
MS.gene060366	MS.gene50297	PPI
MS.gene50297	MS.gene54541	PPI
MS.gene50297	MS.gene39265	PPI
MS.gene50297	MS.gene060368	PPI
MS.gene50297	MS.gene053299	PPI
MS.gene50297	MS.gene28758	PPI
MS.gene57529	MS.gene50297	PPI
MS.gene50297	MS.gene044429	PPI
MS.gene50297	MS.gene42451	PPI
MS.gene40902	MS.gene50297	PPI
MS.gene021553	MS.gene50297	PPI
MS.gene26957	MS.gene50297	PPI
MS.gene033875	MS.gene50297	PPI
MS.gene036582	MS.gene50297	PPI
MS.gene27021	MS.gene50297	PPI
MS.gene066620	MS.gene50297	PPI
MS.gene035236	MS.gene50297	PPI
MS.gene50297	MS.gene034762	PPI
MS.gene50297	MS.gene58319	PPI
MS.gene58320	MS.gene50297	PPI
MS.gene50297	MS.gene59943	PPI
MS.gene58781	MS.gene50297	PPI
MS.gene50297	MS.gene033442	PPI
MS.gene011106	MS.gene50297	PPI
MS.gene62398	MS.gene50297	PPI
MS.gene60027	MS.gene50297	PPI
MS.gene44886	MS.gene50297	PPI
MS.gene038756	MS.gene50297	PPI
MS.gene50297	MS.gene40878	PPI
MS.gene50297	MS.gene44428	PPI
MS.gene50297	MS.gene96407	PPI
MS.gene35068	MS.gene50297	PPI
MS.gene041390	MS.gene50297	PPI
MS.gene92376	MS.gene50297	PPI
MS.gene000035	MS.gene50297	PPI
MS.gene50329	MS.gene50297	PPI
MS.gene50297	MS.gene035235	PPI
MS.gene50297	MS.gene058703	PPI
MS.gene31637	MS.gene50297	PPI
MS.gene87573	MS.gene50297	PPI
MS.gene57537	MS.gene50297	PPI
MS.gene50297	MS.gene024000	PPI
MS.gene50297	MS.gene012215	PPI
MS.gene019504	MS.gene50297	PPI
MS.gene059156	MS.gene50297	PPI
MS.gene50297	MS.gene033079	PPI
MS.gene50297	MS.gene059101	PPI
MS.gene58716	MS.gene50297	PPI
MS.gene50297	MS.gene58316	PPI
MS.gene033444	MS.gene50297	PPI
MS.gene019505	MS.gene50297	PPI
MS.gene50297	MS.gene033430	PPI
MS.gene50306	MS.gene50297	PPI
MS.gene58785	MS.gene50297	PPI
MS.gene50297	MS.gene58321	PPI
MS.gene50297	MS.gene87564	PPI
MS.gene50297	MS.gene58315	PPI
MS.gene50297	MS.gene36595	PPI
MS.gene066639	MS.gene50297	PPI
MS.gene26949	MS.gene50297	PPI
MS.gene50297	MS.gene024004	PPI
MS.gene50297	MS.gene045140	PPI
MS.gene036760	MS.gene50297	PPI
MS.gene58311	MS.gene50297	PPI
MS.gene50297	MS.gene041473	PPI
MS.gene57527	MS.gene50297	PPI
MS.gene033432	MS.gene50297	PPI
MS.gene50297	MS.gene50311	PPI
MS.gene50297	MS.gene058989	PPI
MS.gene033426	MS.gene50297	PPI
MS.gene50297	MS.gene036556	PPI
MS.gene59639	MS.gene50297	PPI
MS.gene50297	MS.gene57538	PPI
MS.gene50297	MS.gene041468	PPI
MS.gene50297	MS.gene060367	PPI
MS.gene50297	MS.gene058693	PPI
MS.gene50297	MS.gene27319	PPI
MS.gene50297	MS.gene041395	PPI
MS.gene50297	MS.gene42447	PPI
MS.gene50297	MS.gene51189	PPI
MS.gene063670	MS.gene50297	PPI
MS.gene50297	MS.gene046958	PPI
MS.gene019506	MS.gene50297	PPI
MS.gene50297	MS.gene24286	PPI
MS.gene50326	MS.gene50297	PPI
MS.gene51200	MS.gene50297	PPI
MS.gene69309	MS.gene50297	PPI
MS.gene024002	MS.gene50297	PPI
MS.gene50297	MS.gene40988	PPI
MS.gene88774	MS.gene50297	PPI
MS.gene50297	MS.gene24173	PPI
MS.gene50297	MS.gene036584	PPI
MS.gene50297	MS.gene036662	PPI
MS.gene034686	MS.gene50297	PPI
MS.gene40982	MS.gene50297	PPI
MS.gene42452	MS.gene50297	PPI
MS.gene063414	MS.gene50297	PPI
MS.gene50297	MS.gene035261	PPI
MS.gene50297	MS.gene023999	PPI
MS.gene50297	MS.gene69307	PPI
MS.gene87563	MS.gene50297	PPI
MS.gene57526	MS.gene50297	PPI
MS.gene50297	MS.gene036581	PPI
MS.gene50297	MS.gene019507	PPI
MS.gene50297	MS.gene033431	PPI
MS.gene051820	MS.gene50297	PPI
MS.gene97996	MS.gene50297	PPI
MS.gene50297	MS.gene000036	PPI
MS.gene81242	MS.gene50297	PPI
MS.gene26101	MS.gene50297	PPI
MS.gene50297	MS.gene50320	PPI
MS.gene27283	MS.gene50297	PPI
MS.gene64203	MS.gene50297	PPI
MS.gene50297	MS.gene58314	PPI
MS.gene50297	MS.gene87557	PPI
MS.gene50297	MS.gene51199	PPI
MS.gene50297	MS.gene035263	PPI
MS.gene50297	MS.gene67501	PPI
MS.gene42444	MS.gene50297	PPI
MS.gene50297	MS.gene96406	PPI
MS.gene50297	MS.gene27285	PPI
MS.gene51202	MS.gene50297	PPI
MS.gene50297	MS.gene035262	PPI
MS.gene50297	MS.gene51201	PPI
MS.gene87562	MS.gene50297	PPI
MS.gene50297	MS.gene028390	PPI
MS.gene50297	MS.gene50336	PPI
MS.gene40904	MS.gene50297	PPI
MS.gene87569	MS.gene50297	PPI
MS.gene064104	MS.gene50297	PPI
MS.gene041491	MS.gene50297	PPI
MS.gene50297	MS.gene047279	PPI
MS.gene50297	MS.gene060370	PPI
MS.gene50297	MS.gene50305	PPI
MS.gene50297	MS.gene024002	PPI
MS.gene50297	MS.gene032969	PPI
MS.gene059096	MS.gene50297	PPI
MS.gene50297	MS.gene68890	PPI
MS.gene57528	MS.gene50297	PPI
MS.gene50297	MS.gene42445	PPI
MS.gene50297	MS.gene86273	PPI
MS.gene006711	MS.gene50297	PPI
MS.gene50297	MS.gene26830	PPI
MS.gene27285	MS.gene50297	PPI
MS.gene50297	MS.gene40985	PPI
MS.gene50297	MS.gene22715	PPI
MS.gene064091	MS.gene50297	PPI
MS.gene50297	MS.gene038756	PPI
MS.gene064112	MS.gene50297	PPI
MS.gene045476	MS.gene50297	PPI
MS.gene24208	MS.gene50297	PPI
MS.gene50297	MS.gene51207	PPI
MS.gene50297	MS.gene63657	PPI
MS.gene50307	MS.gene50297	PPI
MS.gene50297	MS.gene059157	PPI
MS.gene43796	MS.gene50297	PPI
MS.gene034690	MS.gene50297	PPI
MS.gene50297	MS.gene023996	PPI
MS.gene96407	MS.gene50297	PPI
MS.gene50297	MS.gene070462	PPI
MS.gene50297	MS.gene061240	PPI
MS.gene77857	MS.gene50297	PPI
MS.gene50297	MS.gene031590	PPI
MS.gene51191	MS.gene50297	PPI
MS.gene50297	MS.gene064086	PPI
MS.gene50297	MS.gene035234	PPI
MS.gene50297	MS.gene064090	PPI
MS.gene033430	MS.gene50297	PPI
MS.gene50298	MS.gene50297	PPI
MS.gene67687	MS.gene50297	PPI
MS.gene50297	MS.gene24212	PPI
MS.gene036583	MS.gene50297	PPI
MS.gene50297	MS.gene066639	PPI
MS.gene50297	MS.gene50332	PPI
MS.gene88780	MS.gene50297	PPI
MS.gene50297	MS.gene024979	PPI
MS.gene71159	MS.gene50297	PPI
MS.gene96448	MS.gene50297	PPI
MS.gene50297	MS.gene24826	PPI
MS.gene50297	MS.gene044425	PPI
MS.gene058692	MS.gene50297	PPI
MS.gene50297	MS.gene43790	PPI
MS.gene041392	MS.gene50297	PPI
MS.gene63658	MS.gene50297	PPI
MS.gene033081	MS.gene50297	PPI
MS.gene50297	MS.gene40982	PPI
MS.gene50297	MS.gene59637	PPI
MS.gene031591	MS.gene50297	PPI
MS.gene50297	MS.gene27022	PPI
MS.gene50297	MS.gene57530	PPI
MS.gene070461	MS.gene50297	PPI
MS.gene51199	MS.gene50297	PPI
MS.gene50297	MS.gene87585	PPI
MS.gene019503	MS.gene50297	PPI
MS.gene50297	MS.gene024009	PPI
MS.gene50297	MS.gene036599	PPI
MS.gene50297	MS.gene40887	PPI
MS.gene87559	MS.gene50297	PPI
MS.gene50297	MS.gene006705	PPI
MS.gene50297	MS.gene061241	PPI
MS.gene50297	MS.gene035237	PPI
MS.gene50297	MS.gene51188	PPI
MS.gene041475	MS.gene50297	PPI
MS.gene50297	MS.gene033875	PPI
MS.gene033441	MS.gene50297	PPI
MS.gene50297	MS.gene38220	PPI
MS.gene50297	MS.gene50309	PPI
MS.gene50297	MS.gene041394	PPI
MS.gene063826	MS.gene50297	PPI
MS.gene060367	MS.gene50297	PPI
MS.gene50297	MS.gene03060	PPI
MS.gene50297	MS.gene036664	PPI
MS.gene50297	MS.gene024011	PPI
MS.gene50297	MS.gene053257	PPI
MS.gene44892	MS.gene50297	PPI
MS.gene50297	MS.gene58241	PPI
MS.gene50297	MS.gene77858	PPI
MS.gene50297	MS.gene064109	PPI
MS.gene58239	MS.gene50297	PPI
MS.gene50297	MS.gene058696	PPI
MS.gene50297	MS.gene009893	PPI
MS.gene57531	MS.gene50297	PPI
MS.gene064111	MS.gene50297	PPI
MS.gene50297	MS.gene77704	PPI
MS.gene26829	MS.gene50297	PPI
MS.gene39262	MS.gene50297	PPI
MS.gene053256	MS.gene50297	PPI
MS.gene75875	MS.gene50297	PPI
MS.gene50297	MS.gene033083	PPI
MS.gene058694	MS.gene50297	PPI
MS.gene54049	MS.gene50297	PPI
MS.gene43789	MS.gene50297	PPI
MS.gene50297	MS.gene40886	PPI
MS.gene006710	MS.gene50297	PPI
MS.gene50297	MS.gene036663	PPI
MS.gene50297	MS.gene68580	PPI
MS.gene072177	MS.gene50297	PPI
MS.gene58722	MS.gene50297	PPI
MS.gene50297	MS.gene57525	PPI
MS.gene64001	MS.gene50297	PPI
MS.gene50297	MS.gene030114	PPI
MS.gene50297	MS.gene045473	PPI
MS.gene58312	MS.gene50297	PPI
MS.gene50297	MS.gene50301	PPI
MS.gene36704	MS.gene50297	PPI
MS.gene032970	MS.gene50297	PPI
MS.gene50297	MS.gene88774	PPI
MS.gene50297	MS.gene045474	PPI
MS.gene50297	MS.gene036558	PPI
MS.gene77856	MS.gene50297	PPI
MS.gene50297	MS.gene27051	PPI
MS.gene50297	MS.gene40984	PPI
MS.gene58313	MS.gene50297	PPI
MS.gene50297	MS.gene066623	PPI
MS.gene50297	MS.gene064108	PPI
MS.gene066622	MS.gene50297	PPI
MS.gene44887	MS.gene50297	PPI
MS.gene63655	MS.gene50297	PPI
MS.gene50297	MS.gene24208	PPI
MS.gene50297	MS.gene58317	PPI
MS.gene44883	MS.gene50297	PPI
MS.gene50297	MS.gene90742	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50297.t1	MTR_4g023380	66.216	148	26	3	1	124	232	379	4.39e-58	184
MS.gene50297.t1	MTR_4g023090	63.571	140	35	3	1	124	247	386	7.16e-54	173
MS.gene50297.t1	MTR_4g023130	70.968	124	33	2	1	123	191	312	6.63e-51	164
MS.gene50297.t1	MTR_4g023080	71.774	124	32	2	1	123	232	353	2.53e-50	163
MS.gene50297.t1	MTR_4g023070	62.500	136	38	2	1	123	234	369	3.46e-50	163
MS.gene50297.t1	MTR_4g023120	61.314	137	40	2	1	124	234	370	1.11e-48	159
MS.gene50297.t1	MTR_4g021785	68.548	124	36	2	1	123	233	354	2.37e-48	158
MS.gene50297.t1	MTR_4g109270	63.115	122	42	1	6	124	243	364	5.41e-46	152
MS.gene50297.t1	MTR_4g023440	67.241	116	28	2	10	124	226	332	4.03e-45	149
MS.gene50297.t1	MTR_3g103020	63.200	125	42	3	3	124	255	378	9.07e-45	149
MS.gene50297.t1	MTR_4g116330	61.240	129	44	3	1	124	253	380	1.49e-44	149
MS.gene50297.t1	MTR_8g040935	58.915	129	47	2	1	124	81	208	1.93e-44	144
MS.gene50297.t1	MTR_5g023000	65.657	99	31	1	29	124	1	99	2.98e-41	132
MS.gene50297.t1	MTR_4g117870	56.693	127	49	4	1	124	144	267	5.34e-41	137
MS.gene50297.t1	MTR_4g117780	65.179	112	36	2	16	124	256	367	8.21e-41	139
MS.gene50297.t1	MTR_4g116320	61.905	126	40	4	1	121	133	255	9.78e-41	136
MS.gene50297.t1	MTR_4g117770	65.179	112	36	2	16	124	256	367	1.03e-40	139
MS.gene50297.t1	MTR_4g117810	65.179	112	36	2	16	124	256	367	1.03e-40	139
MS.gene50297.t1	MTR_6g060650	55.556	126	50	3	1	123	250	372	4.00e-40	137
MS.gene50297.t1	MTR_4g094365	59.055	127	47	4	1	124	240	364	4.38e-40	137
MS.gene50297.t1	MTR_4g023190	64.865	111	36	3	15	122	247	357	1.12e-39	135
MS.gene50297.t1	MTR_8g433040	58.537	123	48	3	3	124	244	364	3.71e-39	134
MS.gene50297.t1	MTR_8g032380	58.537	123	48	3	3	124	244	364	3.71e-39	134
MS.gene50297.t1	MTR_4g118360	61.207	116	36	4	13	123	14	125	1.34e-38	126
MS.gene50297.t1	MTR_4g023150	63.964	111	37	3	15	122	248	358	1.58e-38	132
MS.gene50297.t1	MTR_4g023200	63.063	111	38	3	15	122	248	358	6.40e-38	131
MS.gene50297.t1	MTR_3g034180	60.630	127	43	5	1	124	367	489	6.91e-38	133
MS.gene50297.t1	MTR_8g433030	58.678	121	46	4	1	119	219	337	2.82e-37	129
MS.gene50297.t1	MTR_8g032390	58.678	121	46	4	1	119	252	370	7.18e-37	129
MS.gene50297.t1	MTR_4g116330	61.062	113	39	2	17	124	229	341	7.80e-37	128
MS.gene50297.t1	MTR_4g109280	57.759	116	41	4	14	124	247	359	2.78e-36	127
MS.gene50297.t1	MTR_4g117530	54.310	116	51	1	9	124	140	253	1.28e-35	122
MS.gene50297.t1	MTR_6g463430	52.756	127	52	2	1	124	81	202	5.45e-35	119
MS.gene50297.t1	MTR_4g117720	51.880	133	52	4	1	124	249	378	7.65e-35	123
MS.gene50297.t1	MTR_4g122850	55.039	129	50	6	1	124	239	364	1.59e-34	122
MS.gene50297.t1	MTR_5g070130	53.906	128	55	2	1	124	250	377	1.60e-34	123
MS.gene50297.t1	MTR_4g117850	56.000	125	49	4	1	121	254	376	3.13e-34	122
MS.gene50297.t1	MTR_3g034160	65.138	109	34	3	17	123	268	374	8.62e-34	120
MS.gene50297.t1	MTR_4g117750	55.172	116	47	2	11	122	367	481	2.02e-32	119
MS.gene50297.t1	MTR_4g117750	46.721	122	58	3	5	123	241	358	1.30e-26	102
MS.gene50297.t1	MTR_1g055195	52.000	125	52	4	1	121	355	475	6.47e-32	117
MS.gene50297.t1	MTR_5g097210	53.279	122	48	5	3	120	243	359	2.49e-31	114
MS.gene50297.t1	MTR_5g070080	58.621	116	43	3	13	124	272	386	4.25e-31	114
MS.gene50297.t1	MTR_3g034130	58.095	105	40	3	1	104	253	354	2.29e-30	111
MS.gene50297.t1	MTR_1g055175	48.438	128	57	5	1	123	77	200	3.35e-30	107
MS.gene50297.t1	MTR_4g118370	48.387	124	56	5	1	121	139	257	4.01e-30	108
MS.gene50297.t1	MTR_4g118380	57.143	98	39	2	3	100	263	357	5.69e-30	110
MS.gene50297.t1	MTR_4g118400	59.551	89	33	1	33	118	206	294	2.91e-29	107
MS.gene50297.t1	MTR_1g055165	48.438	128	57	5	1	123	194	317	9.45e-29	106
MS.gene50297.t1	MTR_4g122860	52.174	115	45	3	17	124	209	320	3.98e-28	105
MS.gene50297.t1	MTR_5g070088	49.219	128	61	2	1	124	259	386	4.32e-28	105
MS.gene50297.t1	MTR_4g023430	65.854	82	22	2	49	124	141	222	8.82e-28	102
MS.gene50297.t1	MTR_1g055135	44.615	130	62	4	1	123	248	374	1.21e-26	102
MS.gene50297.t1	MTR_7g117720	63.218	87	25	2	40	119	186	272	1.39e-26	100
MS.gene50297.t1	MTR_1g055250	48.246	114	55	3	1	114	146	255	1.78e-26	100
MS.gene50297.t1	MTR_7g079450	47.748	111	50	3	17	123	30	136	1.99e-23	88.6
MS.gene50297.t1	MTR_8g102520	47.321	112	51	3	17	124	215	322	4.69e-23	91.7
MS.gene50297.t1	MTR_4g023100	80.000	55	10	1	71	124	65	119	2.45e-22	85.1
MS.gene50297.t1	MTR_4g114700	53.261	92	37	1	30	115	127	218	5.17e-22	87.4
MS.gene50297.t1	MTR_4g121580	47.826	115	50	3	1	114	234	339	5.89e-22	89.4
MS.gene50297.t1	MTR_7g079370	49.057	106	46	3	17	118	249	350	1.04e-21	88.6
MS.gene50297.t1	MTR_7g079400	46.552	116	50	4	17	124	226	337	2.36e-21	87.4
MS.gene50297.t1	MTR_8g098830	50.000	84	37	3	13	96	116	194	1.00e-17	75.9
MS.gene50297.t1	MTR_8g013005	61.017	59	20	1	69	124	1	59	1.09e-17	71.6
MS.gene50297.t1	MTR_7g079420	41.228	114	55	5	17	124	1037	1144	7.41e-16	72.8
MS.gene50297.t1	MTR_4g122840	39.370	127	39	3	1	124	173	264	1.48e-15	70.9
MS.gene50297.t1	MTR_2g048580	37.615	109	53	5	19	124	246	342	5.89e-12	61.2
MS.gene50297.t1	MTR_4g109290	60.377	53	18	1	75	124	136	188	3.10e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 28 sgRNAs with CRISPR-Local

Find 32 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATACTGGTTTGTGGGTATT+TGG	0.151877	4.3:-74908527	MS.gene50297:CDS
CTAATGATACAATTGAAATA+TGG	0.264279	4.3:-74908472	MS.gene50297:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.267319	4.3:-74908508	MS.gene50297:CDS
ATGATAAAGGACAGTTATTA+AGG	0.300794	4.3:-74908298	MS.gene50297:CDS
ATAATCAGATGGACTATTAA+AGG	0.324115	4.3:+74908268	None:intergenic
ATCTGATTATGTCATGTATA+CGG	0.391652	4.3:-74908255	MS.gene50297:CDS
TTGGCGAAGTATAATGATAA+AGG	0.416108	4.3:-74908311	MS.gene50297:CDS
ATAGGGCGAAAGCAGGGTTC+AGG	0.417607	4.3:+74908383	None:intergenic
TGTTCAGAATCACTTGGAAT+AGG	0.431059	4.3:+74908563	None:intergenic
CACAGAGCATTAAGACATAC+TGG	0.435069	4.3:-74908542	MS.gene50297:CDS
AATACAATGTGCATTCATCT+TGG	0.441546	4.3:-74908439	MS.gene50297:CDS
GATATTATTGGAATAAGTCC+TGG	0.455002	4.3:-74908341	MS.gene50297:CDS
TAATGATACAATTGAAATAT+GGG	0.469242	4.3:-74908471	MS.gene50297:CDS
ATTAAGACATACTGGTTTGT+GGG	0.486970	4.3:-74908534	MS.gene50297:CDS
TGGAGAATTTCTCAGTCTAT+GGG	0.490268	4.3:-74908507	MS.gene50297:CDS
AATAAGTCCTGGGACTAGAT+TGG	0.496773	4.3:-74908330	MS.gene50297:CDS
CATTAAGACATACTGGTTTG+TGG	0.501728	4.3:-74908535	MS.gene50297:CDS
ATTTCTCAGTCTATGGGCTA+TGG	0.507502	4.3:-74908501	MS.gene50297:CDS
GAGTCTCTGCTTTCACTCCC+TGG	0.511723	4.3:-74908233	MS.gene50297:CDS
TAAACTTGCTCATTGTCACC+AGG	0.534960	4.3:+74908215	None:intergenic
AGAACATATAGGGCGAAAGC+AGG	0.538165	4.3:+74908376	None:intergenic
TACTTCGCCAATCTAGTCCC+AGG	0.568427	4.3:+74908323	None:intergenic
ATATTATTGGAATAAGTCCT+GGG	0.574033	4.3:-74908340	MS.gene50297:CDS
GCGAAAGCAGGGTTCAGGAA+TGG	0.589429	4.3:+74908388	None:intergenic
GTATACATGACATAATCAGA+TGG	0.633695	4.3:+74908257	None:intergenic
GAACATATAGGGCGAAAGCA+GGG	0.645510	4.3:+74908377	None:intergenic
GCTCTGTGTTCAGAATCACT+TGG	0.661251	4.3:+74908557	None:intergenic
AAACTTGCTCATTGTCACCA+GGG	0.667535	4.3:+74908216	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATGATACAATTGAAATAT+GGG	-	chr4.3:74908309-74908328	MS.gene50297:CDS	15.0%
!!	ACAAAAAATGGTGATATTAT+TGG	-	chr4.3:74908427-74908446	MS.gene50297:CDS	20.0%
!!	CTAATGATACAATTGAAATA+TGG	-	chr4.3:74908308-74908327	MS.gene50297:CDS	20.0%
!!!	CATTTTTTGTAGAACATATA+GGG	+	chr4.3:74908417-74908436	None:intergenic	20.0%
!	ATATTATTGGAATAAGTCCT+GGG	-	chr4.3:74908440-74908459	MS.gene50297:CDS	25.0%
!	ATCTGATTATGTCATGTATA+CGG	-	chr4.3:74908525-74908544	MS.gene50297:CDS	25.0%
!	ATGATAAAGGACAGTTATTA+AGG	-	chr4.3:74908482-74908501	MS.gene50297:CDS	25.0%
!	CCTATATGTTCTACAAAAAA+TGG	-	chr4.3:74908415-74908434	MS.gene50297:CDS	25.0%
!!!	ATAATCAGATGGACTATTAA+AGG	+	chr4.3:74908515-74908534	None:intergenic	25.0%
!!!	CCATTTTTTGTAGAACATAT+AGG	+	chr4.3:74908418-74908437	None:intergenic	25.0%
	AATACAATGTGCATTCATCT+TGG	-	chr4.3:74908341-74908360	MS.gene50297:CDS	30.0%
	GATATTATTGGAATAAGTCC+TGG	-	chr4.3:74908439-74908458	MS.gene50297:CDS	30.0%
	GTATACATGACATAATCAGA+TGG	+	chr4.3:74908526-74908545	None:intergenic	30.0%
	TTGGCGAAGTATAATGATAA+AGG	-	chr4.3:74908469-74908488	MS.gene50297:CDS	30.0%
!!	ATTAAGACATACTGGTTTGT+GGG	-	chr4.3:74908246-74908265	MS.gene50297:CDS	30.0%
	TGGAGAATTTCTCAGTCTAT+GGG	-	chr4.3:74908273-74908292	MS.gene50297:CDS	35.0%
	TGTTCAGAATCACTTGGAAT+AGG	+	chr4.3:74908220-74908239	None:intergenic	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr4.3:74908272-74908291	MS.gene50297:CDS	35.0%
!!	CATTAAGACATACTGGTTTG+TGG	-	chr4.3:74908245-74908264	MS.gene50297:CDS	35.0%
	AATAAGTCCTGGGACTAGAT+TGG	-	chr4.3:74908450-74908469	MS.gene50297:CDS	40.0%
!	AAACTTGCTCATTGTCACCA+GGG	+	chr4.3:74908567-74908586	None:intergenic	40.0%
!	ATTTCTCAGTCTATGGGCTA+TGG	-	chr4.3:74908279-74908298	MS.gene50297:CDS	40.0%
!	CACAGAGCATTAAGACATAC+TGG	-	chr4.3:74908238-74908257	MS.gene50297:CDS	40.0%
!	TAAACTTGCTCATTGTCACC+AGG	+	chr4.3:74908568-74908587	None:intergenic	40.0%
!!	CATACTGGTTTGTGGGTATT+TGG	-	chr4.3:74908253-74908272	MS.gene50297:CDS	40.0%
	AGAACATATAGGGCGAAAGC+AGG	+	chr4.3:74908407-74908426	None:intergenic	45.0%
	GAACATATAGGGCGAAAGCA+GGG	+	chr4.3:74908406-74908425	None:intergenic	45.0%
	GCTCTGTGTTCAGAATCACT+TGG	+	chr4.3:74908226-74908245	None:intergenic	45.0%
	TACTTCGCCAATCTAGTCCC+AGG	+	chr4.3:74908460-74908479	None:intergenic	50.0%
	ATAGGGCGAAAGCAGGGTTC+AGG	+	chr4.3:74908400-74908419	None:intergenic	55.0%
	GAGTCTCTGCTTTCACTCCC+TGG	-	chr4.3:74908547-74908566	MS.gene50297:CDS	55.0%
	GCGAAAGCAGGGTTCAGGAA+TGG	+	chr4.3:74908395-74908414	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	74908214	74908588	74908214	ID=MS.gene50297
chr4.3	mRNA	74908214	74908588	74908214	ID=MS.gene50297.t1;Parent=MS.gene50297
chr4.3	exon	74908214	74908588	74908214	ID=MS.gene50297.t1.exon1;Parent=MS.gene50297.t1
chr4.3	CDS	74908214	74908588	74908214	ID=cds.MS.gene50297.t1;Parent=MS.gene50297.t1

Gene Sequence	>MS.gene50297 ATGCCTATTCCAAGTGATTCTGAACACAGAGCATTAAGACATACTGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGGCTATGGATACTGCTAATGATACAATTGAAATATGGGTGATGAAAGAATACAATGTGCATTCATCTTGGACTAAAACTCTTGTTCTTTCTGTTGATACCATTCCTGAACCCTGCTTTCGCCCTATATGTTCTACAAAAAATGGTGATATTATTGGAATAAGTCCTGGGACTAGATTGGCGAAGTATAATGATAAAGGACAGTTATTAAGGCATCGCTCCTTTAATAGTCCATCTGATTATGTCATGTATACGGAGTCTCTGCTTTCACTCCCTGGTGACAATGAGCAAGTTTAA
Protein sequence	>MS.gene50297.t1 MPIPSDSEHRALRHTGLWVFGEFLSLWAMDTANDTIEIWVMKEYNVHSSWTKTLVLSVDTIPEPCFRPICSTKNGDIIGISPGTRLAKYNDKGQLLRHRSFNSPSDYVMYTESLLSLPGDNEQV