AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51200.t1 MTR_7g079370 84.615 338 20 1 38 343 16 353 0.0 577
MS.gene51200.t1 MTR_2g048580 50.282 354 147 11 3 343 2 339 9.96e-103 306
MS.gene51200.t1 MTR_5g069120 92.537 134 10 0 19 152 1 134 2.47e-87 260
MS.gene51200.t1 MTR_8g102520 46.556 363 125 9 4 343 3 319 2.21e-85 261
MS.gene51200.t1 MTR_7g079400 50.163 307 117 8 70 342 29 333 7.33e-84 257
MS.gene51200.t1 MTR_4g109280 44.384 365 155 14 8 341 7 354 4.66e-78 243
MS.gene51200.t1 MTR_3g103020 42.663 368 176 11 1 340 12 372 1.89e-76 239
MS.gene51200.t1 MTR_4g023080 41.854 356 178 10 3 339 2 347 1.64e-74 234
MS.gene51200.t1 MTR_3g034180 40.263 380 176 11 1 340 115 483 2.16e-73 235
MS.gene51200.t1 MTR_3g034160 41.053 380 173 11 1 340 1 369 7.43e-72 228
MS.gene51200.t1 MTR_4g116330 41.979 374 168 14 2 340 15 374 7.03e-71 225
MS.gene51200.t1 MTR_6g060650 42.895 373 171 10 3 340 2 367 1.56e-70 224
MS.gene51200.t1 MTR_4g021785 39.776 357 188 10 1 339 1 348 1.49e-69 221
MS.gene51200.t1 MTR_3g034130 39.106 358 171 8 1 319 1 350 2.66e-68 218
MS.gene51200.t1 MTR_5g070080 39.793 387 179 12 2 342 3 381 4.54e-68 218
MS.gene51200.t1 MTR_4g023090 38.095 378 186 11 3 340 9 378 2.17e-67 217
MS.gene51200.t1 MTR_4g109270 42.350 366 174 13 3 340 2 358 4.86e-67 215
MS.gene51200.t1 MTR_5g070130 40.751 373 183 11 3 342 5 372 8.40e-67 215
MS.gene51200.t1 MTR_4g094365 40.379 369 177 13 3 340 2 358 1.26e-66 214
MS.gene51200.t1 MTR_5g097210 39.011 364 191 9 1 340 1 357 9.06e-66 212
MS.gene51200.t1 MTR_7g079420 54.286 245 97 8 106 343 905 1141 1.13e-65 224
MS.gene51200.t1 MTR_4g023130 38.592 355 150 10 3 339 2 306 2.17e-65 209
MS.gene51200.t1 MTR_4g122850 42.373 354 166 16 20 341 12 359 2.84e-65 211
MS.gene51200.t1 MTR_4g117850 40.331 362 176 11 8 339 22 373 1.07e-64 209
MS.gene51200.t1 MTR_1g055135 38.398 362 196 6 8 343 12 372 1.12e-64 209
MS.gene51200.t1 MTR_8g433040 39.730 370 166 14 4 340 13 358 3.94e-64 207
MS.gene51200.t1 MTR_8g032380 39.730 370 166 14 4 340 13 358 3.94e-64 207
MS.gene51200.t1 MTR_5g070088 39.175 388 163 12 12 342 10 381 1.71e-63 206
MS.gene51200.t1 MTR_4g117750 39.143 350 176 8 22 343 16 356 3.39e-63 208
MS.gene51200.t1 MTR_4g117750 50.000 110 42 6 239 340 373 477 3.99e-15 76.6
MS.gene51200.t1 MTR_4g023070 39.130 368 174 12 12 339 6 363 4.01e-63 205
MS.gene51200.t1 MTR_4g117770 40.489 368 181 12 3 340 2 361 1.81e-62 203
MS.gene51200.t1 MTR_4g117810 40.489 368 181 12 3 340 2 361 1.81e-62 203
MS.gene51200.t1 MTR_4g117720 39.247 372 151 11 3 342 45 373 9.15e-62 202
MS.gene51200.t1 MTR_4g023120 39.130 368 174 13 12 339 6 363 1.28e-61 201
MS.gene51200.t1 MTR_4g023380 37.960 353 173 8 23 340 30 371 3.46e-61 200
MS.gene51200.t1 MTR_8g032390 39.516 372 164 14 1 342 31 371 4.24e-61 200
MS.gene51200.t1 MTR_4g117780 39.402 368 185 13 3 340 2 361 5.57e-61 199
MS.gene51200.t1 MTR_4g116330 38.874 373 140 14 3 340 16 335 2.33e-59 194
MS.gene51200.t1 MTR_4g023150 42.308 364 173 16 2 340 3 354 3.07e-59 195
MS.gene51200.t1 MTR_4g023190 42.740 365 169 17 2 340 3 353 3.36e-59 194
MS.gene51200.t1 MTR_1g055165 38.682 349 170 12 1 341 1 313 6.40e-59 192
MS.gene51200.t1 MTR_4g118380 39.766 342 156 10 22 318 21 357 1.42e-58 193
MS.gene51200.t1 MTR_4g023440 38.571 350 150 11 12 340 21 326 2.21e-57 189
MS.gene51200.t1 MTR_8g098830 56.173 162 69 2 154 314 34 194 1.51e-55 181
MS.gene51200.t1 MTR_4g023200 40.816 343 166 16 23 340 24 354 2.11e-55 185
MS.gene51200.t1 MTR_4g118400 42.857 280 125 10 75 340 36 294 3.57e-54 180
MS.gene51200.t1 MTR_8g433030 39.031 351 162 14 1 342 31 338 9.69e-53 177
MS.gene51200.t1 MTR_8g013010 40.741 270 126 8 3 247 48 308 1.18e-49 169
MS.gene51200.t1 MTR_4g121580 36.043 369 161 13 6 336 8 339 8.34e-48 166
MS.gene51200.t1 MTR_1g055195 39.768 259 129 7 102 340 221 472 1.81e-43 156
MS.gene51200.t1 MTR_7g079450 60.741 135 50 2 209 343 3 134 5.04e-43 145
MS.gene51200.t1 MTR_4g117870 37.793 299 120 10 70 343 7 264 2.02e-41 145
MS.gene51200.t1 MTR_6g463430 45.500 200 97 8 144 340 6 196 3.87e-39 137
MS.gene51200.t1 MTR_1g055175 42.640 197 106 5 149 341 3 196 5.87e-38 134
MS.gene51200.t1 MTR_4g118370 39.095 243 106 6 119 340 33 254 1.97e-36 132
MS.gene51200.t1 MTR_4g116340 37.021 235 97 7 8 213 35 247 1.22e-35 130
MS.gene51200.t1 MTR_4g116320 44.560 193 97 6 153 341 67 253 1.46e-35 130
MS.gene51200.t1 MTR_8g040935 42.564 195 101 7 153 340 12 202 7.81e-33 121
MS.gene51200.t1 MTR_1g055250 37.500 184 108 5 152 333 75 253 6.36e-26 106
MS.gene51200.t1 MTR_4g114700 33.205 259 96 8 107 337 9 218 6.90e-26 103
MS.gene51200.t1 MTR_4g117530 37.566 189 79 6 154 340 96 247 3.40e-25 102
MS.gene51200.t1 MTR_4g118360 46.667 120 62 2 223 340 1 120 3.46e-25 99.0
MS.gene51200.t1 MTR_3g007410 27.961 304 172 10 12 282 55 344 3.92e-25 105
MS.gene51200.t1 MTR_2g021150 28.065 310 174 12 12 285 17 313 5.48e-25 104
MS.gene51200.t1 MTR_3g007360 28.618 304 170 11 12 282 55 344 5.53e-25 104
MS.gene51200.t1 MTR_6g065980 29.225 284 158 11 12 272 19 282 3.24e-24 102
MS.gene51200.t1 MTR_3g007330 29.180 305 160 13 12 282 51 333 4.46e-23 99.4
MS.gene51200.t1 MTR_2g043410 29.073 313 179 8 9 279 22 333 5.68e-23 99.4
MS.gene51200.t1 MTR_2g029990 26.519 362 218 12 12 338 54 402 9.44e-23 98.6
MS.gene51200.t1 MTR_8g467140 30.667 300 148 14 12 272 35 313 1.50e-22 96.7
MS.gene51200.t1 MTR_3g009310 29.355 310 165 13 4 277 36 327 1.54e-22 97.8
MS.gene51200.t1 MTR_3g036290 27.852 298 174 12 9 283 21 300 2.39e-22 96.7
MS.gene51200.t1 MTR_5g022420 29.577 284 164 13 12 274 30 298 3.92e-22 96.3
MS.gene51200.t1 MTR_3g013740 29.483 329 163 15 4 282 39 348 4.42e-22 96.7
MS.gene51200.t1 MTR_1g097330 29.966 297 156 14 12 275 19 296 8.90e-22 95.9
MS.gene51200.t1 MTR_3g083640 27.336 289 166 11 12 272 58 330 9.78e-22 95.5
MS.gene51200.t1 MTR_2g078900 28.421 285 169 11 12 272 36 309 1.13e-21 94.7
MS.gene51200.t1 MTR_3g007430 28.344 314 159 13 12 284 46 334 1.77e-21 94.7
MS.gene51200.t1 MTR_7g056003 27.331 311 186 8 9 279 15 325 3.86e-21 94.0
MS.gene51200.t1 MTR_5g011200 26.421 299 165 13 12 272 20 301 4.56e-21 93.2
MS.gene51200.t1 MTR_3g013770 28.955 335 153 16 4 282 24 329 4.62e-21 93.6
MS.gene51200.t1 MTR_3g006500 27.483 302 175 12 1 272 9 296 5.75e-21 92.8
MS.gene51200.t1 MTR_3g010870 26.087 368 215 16 9 338 36 384 7.90e-21 92.8
MS.gene51200.t1 MTR_4g055060 26.087 322 181 12 2 282 22 327 1.53e-20 92.0
MS.gene51200.t1 MTR_2g043400 29.393 313 178 11 9 279 23 334 1.65e-20 92.0
MS.gene51200.t1 MTR_4g108820 27.740 292 134 10 12 275 45 287 1.80e-20 90.9
MS.gene51200.t1 MTR_4g117430 38.400 125 58 4 119 229 15 134 1.85e-20 87.0
MS.gene51200.t1 MTR_1g097560 30.033 303 176 14 6 288 33 319 2.15e-20 91.3
MS.gene51200.t1 MTR_3g024110 28.136 295 173 11 12 282 104 383 2.99e-20 91.7
MS.gene51200.t1 MTR_3g014570 25.893 336 169 14 6 288 19 327 5.36e-20 90.5
MS.gene51200.t1 MTR_7g070830 24.938 405 220 13 12 339 24 421 5.40e-20 90.5
MS.gene51200.t1 MTR_3g014540 28.947 304 169 12 12 282 32 321 6.43e-20 90.1
MS.gene51200.t1 MTR_4g107820 27.682 289 173 8 12 275 39 316 6.57e-20 90.1
MS.gene51200.t1 MTR_4g107780 27.682 289 173 8 12 275 39 316 6.57e-20 90.1
MS.gene51200.t1 MTR_4g107820 27.682 289 173 8 12 275 39 316 7.90e-20 90.1
MS.gene51200.t1 MTR_4g107780 27.682 289 173 8 12 275 39 316 8.78e-20 90.1
MS.gene51200.t1 MTR_3g036430 27.465 284 146 11 12 272 23 269 9.49e-20 89.4
MS.gene51200.t1 MTR_2g046920 25.946 370 221 11 5 338 20 372 1.18e-19 89.4
MS.gene51200.t1 MTR_7g117720 32.864 213 91 8 1 183 1 191 1.51e-19 87.4
MS.gene51200.t1 MTR_7g117720 51.724 87 37 3 260 341 186 272 4.46e-15 74.7
MS.gene51200.t1 MTR_5g057710 25.648 347 216 12 12 332 49 379 2.31e-19 88.6
MS.gene51200.t1 MTR_0464s0020 28.097 331 171 14 9 279 23 346 2.38e-19 89.0
MS.gene51200.t1 MTR_7g055870 26.588 425 220 19 1 338 5 424 3.30e-19 88.6
MS.gene51200.t1 MTR_6g021880 26.923 364 208 13 20 338 31 381 3.45e-19 87.8
MS.gene51200.t1 MTR_5g023000 55.056 89 37 2 254 340 6 93 3.96e-19 81.6
MS.gene51200.t1 MTR_3g010970 26.829 287 163 11 12 272 51 316 4.30e-19 87.8
MS.gene51200.t1 MTR_3g072470 26.875 320 181 11 9 279 19 334 4.42e-19 87.8
MS.gene51200.t1 MTR_3g009240 28.425 292 160 11 12 272 39 312 5.08e-19 87.4
MS.gene51200.t1 MTR_0760s0010 26.124 356 214 11 14 338 52 389 5.36e-19 87.4
MS.gene51200.t1 MTR_2g055970 28.990 307 162 15 3 272 205 492 7.73e-19 87.8
MS.gene51200.t1 MTR_7g070880 24.938 405 220 13 12 339 24 421 1.06e-18 87.0
MS.gene51200.t1 MTR_1g055055 28.322 286 175 14 12 282 29 299 1.13e-18 85.9
MS.gene51200.t1 MTR_5g057790 26.000 300 187 9 12 285 49 339 1.41e-18 86.3
MS.gene51200.t1 MTR_3g006670 29.293 297 158 11 12 272 52 332 1.46e-18 86.3
MS.gene51200.t1 MTR_1g054575 28.571 294 159 11 9 270 51 325 1.71e-18 87.0
MS.gene51200.t1 MTR_0044s0300 27.483 302 175 12 2 272 27 315 1.75e-18 85.9
MS.gene51200.t1 MTR_1g097490 29.180 305 190 11 2 288 42 338 2.02e-18 85.9
MS.gene51200.t1 MTR_1g068875 26.144 306 171 10 9 277 4 291 2.09e-18 85.9
MS.gene51200.t1 MTR_7g055930 25.412 425 225 18 1 338 5 424 2.20e-18 85.9
MS.gene51200.t1 MTR_7g060940 26.875 320 182 13 3 279 16 326 2.65e-18 85.5
MS.gene51200.t1 MTR_4g061340 26.349 315 162 12 12 280 29 319 2.71e-18 85.5
MS.gene51200.t1 MTR_7g056290 28.037 321 177 12 9 279 22 338 3.17e-18 85.5
MS.gene51200.t1 MTR_1g050542 28.276 290 163 12 9 270 57 329 3.28e-18 85.5
MS.gene51200.t1 MTR_1g056710 24.702 336 193 13 12 310 37 349 3.55e-18 85.1
MS.gene51200.t1 MTR_3g030240 24.912 285 167 11 12 272 43 304 4.25e-18 84.7
MS.gene51200.t1 MTR_1g054725 23.711 388 210 16 7 338 18 375 5.73e-18 84.3
MS.gene51200.t1 MTR_3g030330 26.429 280 177 10 12 272 23 292 6.17e-18 84.3
MS.gene51200.t1 MTR_7g091630 24.765 319 192 8 5 277 28 344 7.24e-18 84.3
MS.gene51200.t1 MTR_4g031770 24.830 294 173 10 12 272 7 285 7.43e-18 84.0
MS.gene51200.t1 MTR_7g070440 27.329 322 157 13 12 279 10 308 7.45e-18 84.0
MS.gene51200.t1 MTR_0128s0020 26.994 326 178 11 1 279 10 322 1.06e-17 84.0
MS.gene51200.t1 MTR_2g024110 26.316 304 168 11 12 276 7 293 1.14e-17 83.6
MS.gene51200.t1 MTR_3g010520 26.389 288 173 12 4 272 19 286 1.39e-17 83.2
MS.gene51200.t1 MTR_2g028140 27.964 329 162 15 6 272 2 317 1.52e-17 83.6
MS.gene51200.t1 MTR_1g115160 28.378 296 164 13 7 274 20 295 1.53e-17 83.2
MS.gene51200.t1 MTR_7g055987 26.710 307 176 10 9 279 20 313 1.75e-17 82.8
MS.gene51200.t1 MTR_4g030830 25.697 323 178 11 1 272 1 312 1.99e-17 82.8
MS.gene51200.t1 MTR_1g094210 28.523 298 168 15 5 275 52 331 2.11e-17 83.2
MS.gene51200.t1 MTR_1g094210 28.523 298 168 15 5 275 52 331 2.16e-17 82.8
MS.gene51200.t1 MTR_3g464500 25.962 312 186 9 6 277 23 329 2.51e-17 82.8
MS.gene51200.t1 MTR_3g010440 25.524 286 155 7 12 288 29 265 2.63e-17 82.0
MS.gene51200.t1 MTR_7g013590 27.211 294 169 12 12 272 39 320 2.66e-17 82.8
MS.gene51200.t1 MTR_0115s0020 24.372 398 232 15 8 343 9 399 3.03e-17 82.4
MS.gene51200.t1 MTR_3g024150 26.408 284 177 12 12 272 38 312 3.20e-17 82.4
MS.gene51200.t1 MTR_7g077990 27.673 318 194 13 6 287 13 330 4.29e-17 82.0
MS.gene51200.t1 MTR_3g011020 26.844 339 188 13 12 317 31 342 5.47e-17 81.6
MS.gene51200.t1 MTR_3g010590 25.352 284 170 11 12 272 42 306 5.74e-17 81.6
MS.gene51200.t1 MTR_2g028130 26.911 327 172 15 6 277 2 316 6.63e-17 81.6
MS.gene51200.t1 MTR_3g464470 26.861 309 184 11 6 277 3 306 7.80e-17 81.3
MS.gene51200.t1 MTR_3g010620 26.224 286 169 10 9 272 36 301 1.26e-16 80.5
MS.gene51200.t1 MTR_7g077970 25.069 363 195 15 9 310 7 353 1.29e-16 80.9
MS.gene51200.t1 MTR_5g069760 25.413 303 193 11 7 279 4 303 1.35e-16 80.5
MS.gene51200.t1 MTR_2g426090 24.839 310 178 8 9 272 6 306 1.61e-16 80.5
MS.gene51200.t1 MTR_3g023930 25.984 381 195 19 4 338 28 367 2.26e-16 79.7
MS.gene51200.t1 MTR_3g437520 26.866 335 173 13 9 279 23 349 2.30e-16 80.1
MS.gene51200.t1 MTR_3g010390 28.173 323 161 16 12 281 36 340 2.59e-16 79.7
MS.gene51200.t1 MTR_3g030250 25.267 281 176 9 12 272 40 306 2.74e-16 79.3
MS.gene51200.t1 MTR_3g083010 27.245 323 165 13 9 272 6 317 2.83e-16 79.7
MS.gene51200.t1 MTR_1g112930 25.694 288 166 11 13 270 29 298 2.83e-16 79.3
MS.gene51200.t1 MTR_4g070550 28.049 328 157 16 6 272 2 311 3.11e-16 79.3
MS.gene51200.t1 MTR_7g052150 26.398 322 176 14 4 279 16 322 3.22e-16 79.3
MS.gene51200.t1 MTR_3g007300 26.441 295 169 13 6 280 40 306 5.56e-16 78.6
MS.gene51200.t1 MTR_1g100763 25.597 293 168 14 15 287 4 266 7.28e-16 77.4
MS.gene51200.t1 MTR_0667s0010 23.743 358 204 14 6 310 3 344 8.27e-16 78.2
MS.gene51200.t1 MTR_7g007300 26.990 289 163 15 12 272 106 374 8.27e-16 78.6
MS.gene51200.t1 MTR_2g028160 28.313 332 165 18 6 277 2 320 1.04e-15 78.2
MS.gene51200.t1 MTR_1g442850 26.603 312 166 11 9 272 5 301 1.06e-15 77.8
MS.gene51200.t1 MTR_3g006570 25.753 299 182 10 3 272 14 301 1.07e-15 77.8
MS.gene51200.t1 MTR_2g047832 25.967 362 213 12 5 317 25 380 1.26e-15 77.8
MS.gene51200.t1 MTR_6g007135 24.866 374 227 13 9 338 26 389 1.28e-15 77.4
MS.gene51200.t1 MTR_7g066030 24.627 402 223 13 4 339 16 403 1.48e-15 77.4
MS.gene51200.t1 MTR_4g129190 25.078 319 190 10 5 279 2 315 1.56e-15 77.4
MS.gene51200.t1 MTR_4g024890 24.921 317 191 11 1 277 1 310 1.56e-15 77.4
MS.gene51200.t1 MTR_2g461450 24.051 316 198 10 7 300 16 311 1.90e-15 76.6
MS.gene51200.t1 MTR_4g122860 32.632 190 89 8 159 340 156 314 2.03e-15 76.6
MS.gene51200.t1 MTR_7g062100 26.578 301 183 12 12 277 27 324 4.00e-15 76.3
MS.gene51200.t1 MTR_2g047892 26.899 316 172 15 9 276 21 325 4.27e-15 76.3
MS.gene51200.t1 MTR_5g069930 23.453 307 199 11 7 279 4 308 4.28e-15 75.9
MS.gene51200.t1 MTR_3g024040 25.926 297 168 9 15 282 37 310 4.46e-15 75.9
MS.gene51200.t1 MTR_7g066850 25.658 304 189 11 9 277 22 323 6.65e-15 75.9
MS.gene51200.t1 MTR_6g017280 24.876 402 223 18 1 338 1 387 7.02e-15 75.5
MS.gene51200.t1 MTR_1g061330 23.370 368 236 13 9 342 4 359 7.50e-15 75.5
MS.gene51200.t1 MTR_0649s0020 25.205 365 206 13 9 315 10 365 8.53e-15 75.1
MS.gene51200.t1 MTR_2g021050 26.441 295 174 10 6 272 2 281 9.18e-15 75.1
MS.gene51200.t1 MTR_3g011060 26.332 319 148 14 12 272 31 320 1.09e-14 74.7
MS.gene51200.t1 MTR_3g023940 23.333 360 230 13 12 338 37 383 1.21e-14 74.7
MS.gene51200.t1 MTR_8g062660 26.537 309 176 13 1 270 13 309 1.34e-14 75.1
MS.gene51200.t1 MTR_6g016285 25.148 338 162 14 9 277 20 335 1.48e-14 74.7
MS.gene51200.t1 MTR_4g030760 24.207 347 211 12 2 309 66 399 1.84e-14 74.3
MS.gene51200.t1 MTR_1g055070 25.362 276 142 11 3 227 42 304 2.43e-14 73.9
MS.gene51200.t1 MTR_3g036335 24.658 292 176 9 12 272 44 322 2.57e-14 73.6
MS.gene51200.t1 MTR_7g056260 25.478 314 178 10 9 277 14 316 2.65e-14 73.2
MS.gene51200.t1 MTR_3g010920 24.157 356 226 13 7 338 46 381 2.68e-14 73.6
MS.gene51200.t1 MTR_5g046300 25.503 298 160 13 12 272 7 279 5.42e-14 72.4
MS.gene51200.t1 MTR_5g046290 25.503 298 160 13 12 272 7 279 5.42e-14 72.4
MS.gene51200.t1 MTR_1g055375 23.102 303 184 13 7 272 2 292 7.43e-14 72.0
MS.gene51200.t1 MTR_4g080200 24.716 352 200 15 7 318 1 327 7.75e-14 72.0
MS.gene51200.t1 MTR_3g010430 24.359 312 172 11 3 272 29 318 1.27e-13 71.6
MS.gene51200.t1 MTR_4g013175 25.648 347 170 12 7 279 8 340 1.29e-13 71.6
MS.gene51200.t1 MTR_8g101580 25.743 303 170 12 10 275 45 329 1.32e-13 71.6
MS.gene51200.t1 MTR_7g022670 26.780 295 147 12 12 279 26 278 1.56e-13 71.2
MS.gene51200.t1 MTR_4g008790 25.836 329 175 11 12 279 42 362 1.57e-13 71.6
MS.gene51200.t1 MTR_5g068040 27.483 302 167 14 12 277 19 304 1.72e-13 71.2
MS.gene51200.t1 MTR_2g426060 24.233 326 162 13 9 272 6 308 3.63e-13 70.5
MS.gene51200.t1 MTR_4g013185 24.699 332 182 12 12 279 13 340 4.47e-13 70.1
MS.gene51200.t1 MTR_3g006530 22.812 377 218 15 12 338 43 396 5.54e-13 69.7
MS.gene51200.t1 MTR_3g009260 25.667 300 173 10 12 281 44 323 8.31e-13 69.3
MS.gene51200.t1 MTR_7g050520 26.073 303 179 13 6 272 19 312 9.59e-13 68.9
MS.gene51200.t1 MTR_7g050480 26.403 303 178 13 6 272 19 312 1.05e-12 68.9
MS.gene51200.t1 MTR_1g114700 26.246 301 167 13 12 274 32 315 1.29e-12 68.6
MS.gene51200.t1 MTR_7g035295 24.746 295 180 11 7 272 14 295 2.45e-12 67.8
MS.gene51200.t1 MTR_8g073550 28.877 187 102 7 12 170 33 216 2.66e-12 66.2
MS.gene51200.t1 MTR_1g015740 24.468 282 162 9 9 279 8 249 4.54e-12 66.6
MS.gene51200.t1 MTR_7g055977 25.234 321 175 11 7 279 5 308 4.56e-12 67.0
MS.gene51200.t1 MTR_8g012090 24.837 306 175 12 6 275 13 299 4.58e-12 66.6
MS.gene51200.t1 MTR_5g097350 25.199 377 209 15 18 339 25 383 4.76e-12 67.0
MS.gene51200.t1 MTR_2g047200 25.078 319 178 14 9 277 19 326 6.94e-12 66.2
MS.gene51200.t1 MTR_7g066010 24.126 286 156 10 4 236 16 293 7.50e-12 66.2
MS.gene51200.t1 MTR_3g030310 23.841 302 170 12 12 272 24 306 1.14e-11 65.9
MS.gene51200.t1 MTR_5g023570 37.615 109 63 3 7 114 34 138 1.29e-11 62.4
MS.gene51200.t1 MTR_3g009300 25.850 294 157 12 12 281 37 293 2.24e-11 64.7
MS.gene51200.t1 MTR_7g061060 25.397 315 183 13 6 277 10 315 2.32e-11 64.7
MS.gene51200.t1 MTR_7g056373 56.000 50 22 0 9 58 22 71 2.42e-11 60.8
MS.gene51200.t1 MTR_4g023430 40.506 79 47 0 3 81 35 113 2.65e-11 63.2
MS.gene51200.t1 MTR_7g056797 26.101 318 188 12 6 279 20 334 2.69e-11 64.7
MS.gene51200.t1 MTR_5g008530 56.364 55 21 1 6 60 15 66 2.85e-11 59.3
MS.gene51200.t1 MTR_2g043420 37.607 117 58 3 9 115 26 137 3.29e-11 61.6
MS.gene51200.t1 MTR_1g115185 24.667 300 172 9 12 274 42 324 4.16e-11 63.9
MS.gene51200.t1 MTR_7g078050 34.959 123 68 5 12 125 9 128 4.73e-11 62.8
MS.gene51200.t1 MTR_2g022170 36.364 132 70 5 9 137 4 124 4.99e-11 60.1
MS.gene51200.t1 MTR_7g055850 34.459 148 75 6 1 127 5 151 5.86e-11 62.8
MS.gene51200.t1 MTR_1g029650 24.601 313 189 13 9 279 8 315 6.06e-11 63.5
MS.gene51200.t1 MTR_3g010870 25.114 219 119 10 9 198 36 238 7.15e-11 62.8
MS.gene51200.t1 MTR_7g056570 25.995 377 216 17 12 339 21 383 8.34e-11 63.2
MS.gene51200.t1 MTR_3g058480 31.387 137 78 2 12 132 42 178 9.03e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51200.t1 AT3G06240 27.273 407 210 18 2 338 29 419 1.84e-22 97.8
MS.gene51200.t1 AT3G23880 26.000 300 187 10 3 274 7 299 2.18e-14 73.9
MS.gene51200.t1 AT1G33530 24.055 291 174 15 10 273 97 367 1.28e-12 68.9
MS.gene51200.t1 AT1G47790 22.105 285 177 11 12 268 28 295 3.61e-11 64.3

Find 89 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCCTTGATTTAA+AGG 0.097182 7.3:+27760014 MS.gene51200:CDS
CTCTGTATACACGGCCATTT+TGG 0.162048 7.3:-27760367 None:intergenic
AAATCAATGGATAAGGTTTC+AGG 0.212005 7.3:-27759494 None:intergenic
AAAGTGTAAAGTTGCAAAAT+TGG 0.244332 7.3:-27759417 None:intergenic
CCGACAAAGGCTTCTATCTA+TGG 0.300497 7.3:+27759630 MS.gene51200:CDS
TTCTATACAATATGATTTGT+TGG 0.329655 7.3:+27760086 MS.gene51200:CDS
TCTCATTGAGAGCTAATAAC+TGG 0.335376 7.3:+27759860 MS.gene51200:CDS
AGGATTTCTGTTATCACTTC+CGG 0.338610 7.3:-27759320 None:intergenic
CAAGAACAACCCAACTTTGT+TGG 0.347764 7.3:-27759941 None:intergenic
CTTGAATGGGGCTATTCATT+GGG 0.357670 7.3:+27759960 MS.gene51200:CDS
CCTAGGTCACCTATGACTAT+TGG 0.359555 7.3:+27759683 MS.gene51200:CDS
TCTTGAATGGGGCTATTCAT+TGG 0.366732 7.3:+27759959 MS.gene51200:CDS
ACAAATTGTGGTGATATAGT+TGG 0.372938 7.3:+27760255 MS.gene51200:CDS
AAAGTTGGGTTGTTCTTGAA+TGG 0.378544 7.3:+27759946 MS.gene51200:CDS
TTTAAAGGAAACGACAATAT+CGG 0.386229 7.3:+27760029 MS.gene51200:CDS
AAGAAGCGTGCATCTGCTTC+CGG 0.386581 7.3:+27759301 MS.gene51200:CDS
ACTTCACCGGCAACCTCAAT+AGG 0.386853 7.3:-27759340 None:intergenic
TTAGTATTAATGACCATATA+AGG 0.398204 7.3:-27759910 None:intergenic
TATGATTTGTTGGTGCTTGA+TGG 0.399308 7.3:+27760096 MS.gene51200:CDS
TTGTCGTTTCCTTTAAATCA+AGG 0.403819 7.3:-27760023 None:intergenic
TGAAGTATGTACTACGTTAC+AGG 0.406160 7.3:+27759357 MS.gene51200:CDS
CTGCATGAACCTCCGATTTG+AGG 0.419923 7.3:-27759587 None:intergenic
AAGTTGGGTTGTTCTTGAAT+GGG 0.426332 7.3:+27759947 MS.gene51200:CDS
AATAGATGGTTATGATGAAT+TGG 0.429575 7.3:+27760278 MS.gene51200:CDS
ACATGGATACAGTGGAGATA+TGG 0.432548 7.3:+27760142 MS.gene51200:CDS
AGCTTGATTCCAATAGTCAT+AGG 0.434478 7.3:-27759692 None:intergenic
GTGACCTAGGTATTTGTTTG+TGG 0.437568 7.3:-27759670 None:intergenic
GGTGATATAGTTGGAATAGA+TGG 0.438979 7.3:+27760264 MS.gene51200:CDS
AGAAATCCTATTGAGGTTGC+CGG 0.439306 7.3:+27759334 MS.gene51200:CDS
AATATGCAGTGCATTCATCT+TGG 0.443353 7.3:+27760175 MS.gene51200:CDS
AGGGAAACAATCATTTCCTA+TGG 0.444045 7.3:-27759474 None:intergenic
AATCGTCCTTCCAACAAAGT+TGG 0.444065 7.3:+27759931 MS.gene51200:CDS
ATCGTCCTTCCAACAAAGTT+GGG 0.448542 7.3:+27759932 MS.gene51200:CDS
CACAATTTGTAAAGTATACT+AGG 0.449978 7.3:-27760242 None:intergenic
TGCATCAAAATCAATGGATA+AGG 0.452169 7.3:-27759501 None:intergenic
AATCATTTCCTATGGACAAA+AGG 0.452510 7.3:-27759466 None:intergenic
CTCAAATCGGAGGTTCATGC+AGG 0.454413 7.3:+27759588 MS.gene51200:CDS
GCTATCTAGTTTGAGTAACT+TGG 0.455895 7.3:+27759831 MS.gene51200:intron
CTCCGATTTGAGGATGTTGT+TGG 0.463805 7.3:-27759577 None:intergenic
ATGATTTGTTGGTGCTTGAT+GGG 0.469175 7.3:+27760097 MS.gene51200:CDS
ACAGGTGTGTTTGCAAATCA+TGG 0.470956 7.3:+27759375 MS.gene51200:CDS
CAAAAGGTTGTGTGTGGGTG+AGG 0.472240 7.3:-27759450 None:intergenic
AATCAATGGATAAGGTTTCA+GGG 0.476772 7.3:-27759493 None:intergenic
CTAGTATACTTTACAAATTG+TGG 0.480538 7.3:+27760243 MS.gene51200:CDS
AAGTGTAAAGTTGCAAAATT+GGG 0.480705 7.3:-27759416 None:intergenic
CACCAACAACATCCTCAAAT+CGG 0.482160 7.3:+27759575 MS.gene51200:CDS
ACTAGGAAGAAGTCCGGATC+AGG 0.484951 7.3:-27760225 None:intergenic
GAAGTCCGGATCAGGATGTA+TGG 0.490826 7.3:-27760217 None:intergenic
CCATAGATAGAAGCCTTTGT+CGG 0.491901 7.3:-27759630 None:intergenic
GGCAATAATAACAACAATGT+TGG 0.492889 7.3:-27760001 None:intergenic
AAGAGATGCATCAAAATCAA+TGG 0.496420 7.3:-27759507 None:intergenic
AGGTATTTGTTTGTGGACTC+CGG 0.506163 7.3:-27759663 None:intergenic
TGTCGTTTCCTTTAAATCAA+GGG 0.506960 7.3:-27760022 None:intergenic
GTGATCCATAAAATCAAGGA+TGG 0.510701 7.3:-27759555 None:intergenic
GAATGGGGCTATTCATTGGG+TGG 0.513164 7.3:+27759963 MS.gene51200:CDS
AACTGGAAACAAGTTGAGGT+TGG 0.514529 7.3:+27759877 MS.gene51200:CDS
CATGGATACAGTGGAGATAT+GGG 0.524392 7.3:+27760143 MS.gene51200:CDS
TTGGTGAAGTTTAATTACAA+AGG 0.525559 7.3:+27760297 MS.gene51200:CDS
AAGTATACTAGGAAGAAGTC+CGG 0.536637 7.3:-27760231 None:intergenic
AACAACCCAACTTTGTTGGA+AGG 0.537379 7.3:-27759937 None:intergenic
ATGAGAGATTCTCTAGCAGC+TGG 0.543433 7.3:-27760320 None:intergenic
TGTTTGTGGACTCCGGTGGA+TGG 0.562979 7.3:-27759656 None:intergenic
TGACCAATCAAACGCCGGTA+GGG 0.568769 7.3:-27760404 None:intergenic
CCAATAGTCATAGGTGACCT+AGG 0.574680 7.3:-27759683 None:intergenic
TTGATGGGCTTGTTAGTGCA+TGG 0.575399 7.3:+27760112 MS.gene51200:CDS
AGTTGGGTTGTTCTTGAATG+GGG 0.579967 7.3:+27759948 MS.gene51200:CDS
TAACGTAGTACATACTTCAC+CGG 0.582782 7.3:-27759353 None:intergenic
GTTGGTGATCCATAAAATCA+AGG 0.583053 7.3:-27759559 None:intergenic
TCCATAAAATCAAGGATGGG+TGG 0.589372 7.3:-27759551 None:intergenic
TAGTGCATGGACTGTGGACA+TGG 0.590800 7.3:+27760125 MS.gene51200:CDS
TTGACCAATCAAACGCCGGT+AGG 0.594456 7.3:-27760405 None:intergenic
TCAAATCGGAGGTTCATGCA+GGG 0.599924 7.3:+27759589 MS.gene51200:CDS
TGATAACAGAAATCCTATTG+AGG 0.606738 7.3:+27759327 MS.gene51200:CDS
TATCTATGGAATCCATCCAC+CGG 0.610615 7.3:+27759644 MS.gene51200:CDS
AAATCGGAGGTTCATGCAGG+GGG 0.612641 7.3:+27759591 MS.gene51200:CDS
TCTCTGCTTTCACTCCCTAC+CGG 0.631705 7.3:+27760390 MS.gene51200:CDS
TTCATTGACCAATCAAACGC+CGG 0.633561 7.3:-27760409 None:intergenic
TATTTGTTTGTGGACTCCGG+TGG 0.635344 7.3:-27759660 None:intergenic
TATGGACAAAAGGTTGTGTG+TGG 0.643394 7.3:-27759456 None:intergenic
CAAATCGGAGGTTCATGCAG+GGG 0.646676 7.3:+27759590 MS.gene51200:CDS
TAATAACTGGAAACAAGTTG+AGG 0.646892 7.3:+27759873 MS.gene51200:CDS
AAGCAGAGACTCTGTATACA+CGG 0.652046 7.3:-27760376 None:intergenic
GAGTCCACAAACAAATACCT+AGG 0.656423 7.3:+27759666 MS.gene51200:CDS
TGATCCATAAAATCAAGGAT+GGG 0.658623 7.3:-27759554 None:intergenic
AAGGTTGTGTGTGGGTGAGG+CGG 0.658631 7.3:-27759447 None:intergenic
GACTGTGGACATGGATACAG+TGG 0.664275 7.3:+27760134 MS.gene51200:CDS
CAACAACATCCTCAAATCGG+AGG 0.684331 7.3:+27759578 MS.gene51200:CDS
GCTTGTTAGTGCATGGACTG+TGG 0.689938 7.3:+27760119 MS.gene51200:CDS
ATGGACAAAAGGTTGTGTGT+GGG 0.716607 7.3:-27759455 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTAAGGTTTTTGTA+TGG + chr7.3:27759731-27759750 MS.gene51200:intron 15.0%
!! ATAGTCATTATAGCATTTAT+AGG - chr7.3:27759806-27759825 None:intergenic 20.0%
!! TTAGTATTAATGACCATATA+AGG - chr7.3:27759913-27759932 None:intergenic 20.0%
!!! ATGATTACTTAGTAGTTTTA+GGG + chr7.3:27759777-27759796 MS.gene51200:intron 20.0%
!!! TTCTATACAATATGATTTGT+TGG + chr7.3:27760086-27760105 MS.gene51200:CDS 20.0%
! AAAGTGTAAAGTTGCAAAAT+TGG - chr7.3:27759420-27759439 None:intergenic 25.0%
! AAGTGTAAAGTTGCAAAATT+GGG - chr7.3:27759419-27759438 None:intergenic 25.0%
! AATAGATGGTTATGATGAAT+TGG + chr7.3:27760278-27760297 MS.gene51200:CDS 25.0%
! AATGCTATAATGACTATGAT+CGG + chr7.3:27759809-27759828 MS.gene51200:intron 25.0%
! CACAATTTGTAAAGTATACT+AGG - chr7.3:27760245-27760264 None:intergenic 25.0%
! CTAGTATACTTTACAAATTG+TGG + chr7.3:27760243-27760262 MS.gene51200:CDS 25.0%
! TAAGTAACACAAAAATCATC+TGG - chr7.3:27760066-27760085 None:intergenic 25.0%
! TATTATTGCCCTTGATTTAA+AGG + chr7.3:27760014-27760033 MS.gene51200:CDS 25.0%
! TTGGTGAAGTTTAATTACAA+AGG + chr7.3:27760297-27760316 MS.gene51200:CDS 25.0%
! TTTAAAGGAAACGACAATAT+CGG + chr7.3:27760029-27760048 MS.gene51200:CDS 25.0%
!! GATGATTACTTAGTAGTTTT+AGG + chr7.3:27759776-27759795 MS.gene51200:intron 25.0%
!! TGGTTTTCATTTACCTTATA+TGG + chr7.3:27759897-27759916 MS.gene51200:CDS 25.0%
!! TTCTCAATCGCAATATTTTA+AGG + chr7.3:27759720-27759739 MS.gene51200:CDS 25.0%
AAATCAATGGATAAGGTTTC+AGG - chr7.3:27759497-27759516 None:intergenic 30.0%
AAGAGATGCATCAAAATCAA+TGG - chr7.3:27759510-27759529 None:intergenic 30.0%
AATCAATGGATAAGGTTTCA+GGG - chr7.3:27759496-27759515 None:intergenic 30.0%
AATCATTTCCTATGGACAAA+AGG - chr7.3:27759469-27759488 None:intergenic 30.0%
ACAAATTGTGGTGATATAGT+TGG + chr7.3:27760255-27760274 MS.gene51200:CDS 30.0%
ACTAAGTAATCATCAGTTGA+AGG - chr7.3:27759770-27759789 None:intergenic 30.0%
GGCAATAATAACAACAATGT+TGG - chr7.3:27760004-27760023 None:intergenic 30.0%
TAATAACTGGAAACAAGTTG+AGG + chr7.3:27759873-27759892 MS.gene51200:CDS 30.0%
TGATAACAGAAATCCTATTG+AGG + chr7.3:27759327-27759346 MS.gene51200:CDS 30.0%
TGATCCATAAAATCAAGGAT+GGG - chr7.3:27759557-27759576 None:intergenic 30.0%
TGCATCAAAATCAATGGATA+AGG - chr7.3:27759504-27759523 None:intergenic 30.0%
! TGTCGTTTCCTTTAAATCAA+GGG - chr7.3:27760025-27760044 None:intergenic 30.0%
! TTGTCGTTTCCTTTAAATCA+AGG - chr7.3:27760026-27760045 None:intergenic 30.0%
!! GATTTTGATGCATCTCTTAA+CGG + chr7.3:27759512-27759531 MS.gene51200:CDS 30.0%
!!! TTTTTCAGGTAGATCCAAAA+TGG + chr7.3:27760353-27760372 MS.gene51200:CDS 30.0%
AAGTATACTAGGAAGAAGTC+CGG - chr7.3:27760234-27760253 None:intergenic 35.0%
AATATGCAGTGCATTCATCT+TGG + chr7.3:27760175-27760194 MS.gene51200:CDS 35.0%
AGCTTGATTCCAATAGTCAT+AGG - chr7.3:27759695-27759714 None:intergenic 35.0%
AGGATTTCTGTTATCACTTC+CGG - chr7.3:27759323-27759342 None:intergenic 35.0%
AGGGAAACAATCATTTCCTA+TGG - chr7.3:27759477-27759496 None:intergenic 35.0%
GGTGATATAGTTGGAATAGA+TGG + chr7.3:27760264-27760283 MS.gene51200:CDS 35.0%
GTGATCCATAAAATCAAGGA+TGG - chr7.3:27759558-27759577 None:intergenic 35.0%
TAACGTAGTACATACTTCAC+CGG - chr7.3:27759356-27759375 None:intergenic 35.0%
TCTCATTGAGAGCTAATAAC+TGG + chr7.3:27759860-27759879 MS.gene51200:CDS 35.0%
TGAAGTATGTACTACGTTAC+AGG + chr7.3:27759357-27759376 MS.gene51200:CDS 35.0%
! AAAGTTGGGTTGTTCTTGAA+TGG + chr7.3:27759946-27759965 MS.gene51200:CDS 35.0%
! AAGTTGGGTTGTTCTTGAAT+GGG + chr7.3:27759947-27759966 MS.gene51200:CDS 35.0%
! GCTATCTAGTTTGAGTAACT+TGG + chr7.3:27759831-27759850 MS.gene51200:intron 35.0%
! TTTTTCCATACATCCTGATC+CGG + chr7.3:27760212-27760231 MS.gene51200:CDS 35.0%
!! ATGATTTGTTGGTGCTTGAT+GGG + chr7.3:27760097-27760116 MS.gene51200:CDS 35.0%
!! GTTGGTGATCCATAAAATCA+AGG - chr7.3:27759562-27759581 None:intergenic 35.0%
!! TATGATTTGTTGGTGCTTGA+TGG + chr7.3:27760096-27760115 MS.gene51200:CDS 35.0%
!!! TCATATCGTAGCTGTTTTTC+AGG + chr7.3:27760339-27760358 MS.gene51200:CDS 35.0%
AACAACCCAACTTTGTTGGA+AGG - chr7.3:27759940-27759959 None:intergenic 40.0%
AAGCAGAGACTCTGTATACA+CGG - chr7.3:27760379-27760398 None:intergenic 40.0%
AATCGTCCTTCCAACAAAGT+TGG + chr7.3:27759931-27759950 MS.gene51200:CDS 40.0%
ACAGGTGTGTTTGCAAATCA+TGG + chr7.3:27759375-27759394 MS.gene51200:CDS 40.0%
ACATGGATACAGTGGAGATA+TGG + chr7.3:27760142-27760161 MS.gene51200:CDS 40.0%
AGAAATCCTATTGAGGTTGC+CGG + chr7.3:27759334-27759353 MS.gene51200:CDS 40.0%
AGGTATTTGTTTGTGGACTC+CGG - chr7.3:27759666-27759685 None:intergenic 40.0%
ATCGTCCTTCCAACAAAGTT+GGG + chr7.3:27759932-27759951 MS.gene51200:CDS 40.0%
ATGGACAAAAGGTTGTGTGT+GGG - chr7.3:27759458-27759477 None:intergenic 40.0%
CAAGAACAACCCAACTTTGT+TGG - chr7.3:27759944-27759963 None:intergenic 40.0%
CACCAACAACATCCTCAAAT+CGG + chr7.3:27759575-27759594 MS.gene51200:CDS 40.0%
CATGGATACAGTGGAGATAT+GGG + chr7.3:27760143-27760162 MS.gene51200:CDS 40.0%
CCATAGATAGAAGCCTTTGT+CGG - chr7.3:27759633-27759652 None:intergenic 40.0%
CTTGAATGGGGCTATTCATT+GGG + chr7.3:27759960-27759979 MS.gene51200:CDS 40.0%
GAGTCCACAAACAAATACCT+AGG + chr7.3:27759666-27759685 MS.gene51200:CDS 40.0%
GTGACCTAGGTATTTGTTTG+TGG - chr7.3:27759673-27759692 None:intergenic 40.0%
TATCTATGGAATCCATCCAC+CGG + chr7.3:27759644-27759663 MS.gene51200:CDS 40.0%
TATGGACAAAAGGTTGTGTG+TGG - chr7.3:27759459-27759478 None:intergenic 40.0%
TCCATAAAATCAAGGATGGG+TGG - chr7.3:27759554-27759573 None:intergenic 40.0%
TCTTGAATGGGGCTATTCAT+TGG + chr7.3:27759959-27759978 MS.gene51200:CDS 40.0%
! AACTGGAAACAAGTTGAGGT+TGG + chr7.3:27759877-27759896 MS.gene51200:CDS 40.0%
! ACACACAACCTTTTGTCCAT+AGG + chr7.3:27759458-27759477 MS.gene51200:CDS 40.0%
! AGTTGGGTTGTTCTTGAATG+GGG + chr7.3:27759948-27759967 MS.gene51200:CDS 40.0%
! TCCACCCATCCTTGATTTTA+TGG + chr7.3:27759550-27759569 MS.gene51200:CDS 40.0%
ATGAGAGATTCTCTAGCAGC+TGG - chr7.3:27760323-27760342 None:intergenic 45.0%
CAACAACATCCTCAAATCGG+AGG + chr7.3:27759578-27759597 MS.gene51200:CDS 45.0%
CCAATAGTCATAGGTGACCT+AGG - chr7.3:27759686-27759705 None:intergenic 45.0%
CCGACAAAGGCTTCTATCTA+TGG + chr7.3:27759630-27759649 MS.gene51200:CDS 45.0%
CCTAGGTCACCTATGACTAT+TGG + chr7.3:27759683-27759702 MS.gene51200:CDS 45.0%
TATTTGTTTGTGGACTCCGG+TGG - chr7.3:27759663-27759682 None:intergenic 45.0%
TCAAATCGGAGGTTCATGCA+GGG + chr7.3:27759589-27759608 MS.gene51200:CDS 45.0%
! CTCCGATTTGAGGATGTTGT+TGG - chr7.3:27759580-27759599 None:intergenic 45.0%
! CTCTGTATACACGGCCATTT+TGG - chr7.3:27760370-27760389 None:intergenic 45.0%
!! GTGTTTTTGCACTCCGACAA+AGG + chr7.3:27759617-27759636 MS.gene51200:CDS 45.0%
!! TTGATGGGCTTGTTAGTGCA+TGG + chr7.3:27760112-27760131 MS.gene51200:CDS 45.0%
AAATCGGAGGTTCATGCAGG+GGG + chr7.3:27759591-27759610 MS.gene51200:CDS 50.0%
ACTAGGAAGAAGTCCGGATC+AGG - chr7.3:27760228-27760247 None:intergenic 50.0%
ACTTCACCGGCAACCTCAAT+AGG - chr7.3:27759343-27759362 None:intergenic 50.0%
CAAAAGGTTGTGTGTGGGTG+AGG - chr7.3:27759453-27759472 None:intergenic 50.0%
CAAATCGGAGGTTCATGCAG+GGG + chr7.3:27759590-27759609 MS.gene51200:CDS 50.0%
CTCAAATCGGAGGTTCATGC+AGG + chr7.3:27759588-27759607 MS.gene51200:CDS 50.0%
GAAGTCCGGATCAGGATGTA+TGG - chr7.3:27760220-27760239 None:intergenic 50.0%
GAATGGGGCTATTCATTGGG+TGG + chr7.3:27759963-27759982 MS.gene51200:CDS 50.0%
GACTGTGGACATGGATACAG+TGG + chr7.3:27760134-27760153 MS.gene51200:CDS 50.0%
TCTCTGCTTTCACTCCCTAC+CGG + chr7.3:27760390-27760409 MS.gene51200:CDS 50.0%
! AAGAAGCGTGCATCTGCTTC+CGG + chr7.3:27759301-27759320 MS.gene51200:CDS 50.0%
! CTGCATGAACCTCCGATTTG+AGG - chr7.3:27759590-27759609 None:intergenic 50.0%
! GCTTGTTAGTGCATGGACTG+TGG + chr7.3:27760119-27760138 MS.gene51200:CDS 50.0%
! TAGTGCATGGACTGTGGACA+TGG + chr7.3:27760125-27760144 MS.gene51200:CDS 50.0%
AAGGTTGTGTGTGGGTGAGG+CGG - chr7.3:27759450-27759469 None:intergenic 55.0%
TGTTTGTGGACTCCGGTGGA+TGG - chr7.3:27759659-27759678 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 27759290 27760419 27759290 ID=MS.gene51200
chr7.3 mRNA 27759290 27760419 27759290 ID=MS.gene51200.t1;Parent=MS.gene51200
chr7.3 exon 27759290 27759741 27759290 ID=MS.gene51200.t1.exon1;Parent=MS.gene51200.t1
chr7.3 CDS 27759290 27759741 27759290 ID=cds.MS.gene51200.t1;Parent=MS.gene51200.t1
chr7.3 exon 27759840 27760419 27759840 ID=MS.gene51200.t1.exon2;Parent=MS.gene51200.t1
chr7.3 CDS 27759840 27760419 27759840 ID=cds.MS.gene51200.t1;Parent=MS.gene51200.t1
Gene Sequence

>MS.gene51200

ATGGCTGAGAGAAGAAGCGTGCATCTGCTTCCGGAAGTGATAACAGAAATCCTATTGAGGTTGCCGGTGAAGTATGTACTACGTTACAGGTGTGTTTGCAAATCATGGCTGTCTCTCATCTCTCATCCCAATTTTGCAACTTTACACTTTCATCTTGCCGCCTCACCCACACACAACCTTTTGTCCATAGGAAATGATTGTTTCCCTGAAACCTTATCCATTGATTTTGATGCATCTCTTAACGGTGATTCTGCTTATGTTCCACCCATCCTTGATTTTATGGATCACCAACAACATCCTCAAATCGGAGGTTCATGCAGGGGGTTTGTGTTTTTGCACTCCGACAAAGGCTTCTATCTATGGAATCCATCCACCGGAGTCCACAAACAAATACCTAGGTCACCTATGACTATTGGAATCAAGCTAAATATTCTCAATCGCAATATTTTAAGGTTTTTGTATGGCTTTGCATACGAACCTTCAACTGATGATTACTTAGTAGTTTTAGGGTGTCCTATAAATGCTATAATGACTATGATCGGCTATCTAGTTTGAGTAACTTGGAGATTTTCTCATTGAGAGCTAATAACTGGAAACAAGTTGAGGTTGGTTTTCATTTACCTTATATGGTCATTAATACTAATCGTCCTTCCAACAAAGTTGGGTTGTTCTTGAATGGGGCTATTCATTGGGTGGTTCATAATCATGAGACCAACATTGTTGTTATTATTGCCCTTGATTTAAAGGAAACGACAATATCGGAGATAGCTCTGCCAGATGATTTTTGTGTTACTTATTCTATACAATATGATTTGTTGGTGCTTGATGGGCTTGTTAGTGCATGGACTGTGGACATGGATACAGTGGAGATATGGGTGATGCAAGAATATGCAGTGCATTCATCTTGGATTAAAACTCTTGTTTTTTCCATACATCCTGATCCGGACTTCTTCCTAGTATACTTTACAAATTGTGGTGATATAGTTGGAATAGATGGTTATGATGAATTGGTGAAGTTTAATTACAAAGGCCAGCTGCTAGAGAATCTCTCATATCGTAGCTGTTTTTCAGGTAGATCCAAAATGGCCGTGTATACAGAGTCTCTGCTTTCACTCCCTACCGGCGTTTGA
Protein sequence

>MS.gene51200.t1

MAERRSVHLLPEVITEILLRLPVKYVLRYRCVCKSWLSLISHPNFATLHFHLAASPTHNLLSIGNDCFPETLSIDFDASLNGDSAYVPPILDFMDHQQHPQIGGSCRGFVFLHSDKGFYLWNPSTGVHKQIPRSPMTIGIKLNILNRNILSLSNLEIFSLRANNWKQVEVGFHLPYMVINTNRPSNKVGLFLNGAIHWVVHNHETNIVVIIALDLKETTISEIALPDDFCVTYSIQYDLLVLDGLVSAWTVDMDTVEIWVMQEYAVHSSWIKTLVFSIHPDPDFFLVYFTNCGDIVGIDGYDELVKFNYKGQLLENLSYRSCFSGRSKMAVYTESLLSLPTGV