AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene96406

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96406.t1 MTR_4g116330 80.679 383 67 3 7 388 4 380 0.0 608
MS.gene96406.t1 MTR_4g116330 72.324 383 60 4 7 388 4 341 0.0 519
MS.gene96406.t1 MTR_3g103020 54.145 386 157 9 9 388 7 378 1.84e-125 367
MS.gene96406.t1 MTR_4g117850 55.228 373 140 11 22 384 20 375 3.54e-123 361
MS.gene96406.t1 MTR_4g023080 54.255 376 140 12 15 384 1 350 4.70e-122 357
MS.gene96406.t1 MTR_4g023090 51.938 387 152 10 16 383 8 379 1.21e-118 350
MS.gene96406.t1 MTR_4g094365 52.255 377 157 10 20 388 3 364 7.08e-118 347
MS.gene96406.t1 MTR_4g109280 55.135 370 146 8 23 388 6 359 3.86e-117 345
MS.gene96406.t1 MTR_4g021785 52.957 372 152 8 15 384 1 351 9.24e-116 341
MS.gene96406.t1 MTR_4g023130 52.533 375 107 10 15 384 1 309 1.28e-115 339
MS.gene96406.t1 MTR_3g034180 52.284 394 157 12 10 387 110 488 2.75e-114 342
MS.gene96406.t1 MTR_4g023070 50.132 379 155 11 25 384 3 366 3.64e-113 335
MS.gene96406.t1 MTR_4g109270 51.444 381 144 10 25 388 8 364 2.34e-111 330
MS.gene96406.t1 MTR_4g023120 50.396 379 154 13 25 384 3 366 4.31e-110 327
MS.gene96406.t1 MTR_3g034130 52.186 366 147 10 15 364 1 354 8.92e-110 327
MS.gene96406.t1 MTR_6g060650 53.639 371 158 7 22 384 5 369 1.62e-109 326
MS.gene96406.t1 MTR_3g034160 52.185 389 155 12 15 387 1 374 8.82e-109 324
MS.gene96406.t1 MTR_4g117780 51.309 382 163 12 15 388 1 367 5.37e-108 322
MS.gene96406.t1 MTR_4g117770 51.948 385 156 12 15 388 1 367 1.87e-106 318
MS.gene96406.t1 MTR_4g117810 51.948 385 156 12 15 388 1 367 1.87e-106 318
MS.gene96406.t1 MTR_4g122850 52.089 359 146 14 36 381 12 357 8.04e-105 314
MS.gene96406.t1 MTR_4g023440 48.556 381 130 10 16 388 10 332 2.12e-100 301
MS.gene96406.t1 MTR_4g023150 50.131 381 155 15 14 384 1 356 3.46e-100 301
MS.gene96406.t1 MTR_4g023200 51.181 381 151 15 14 384 1 356 1.63e-99 300
MS.gene96406.t1 MTR_4g023380 49.495 396 137 13 16 381 8 370 2.42e-99 300
MS.gene96406.t1 MTR_8g433040 47.287 387 163 13 13 388 8 364 2.24e-98 297
MS.gene96406.t1 MTR_8g032380 47.287 387 163 13 13 388 8 364 2.24e-98 297
MS.gene96406.t1 MTR_4g023190 50.131 381 154 15 14 384 1 355 6.05e-98 296
MS.gene96406.t1 MTR_5g070088 47.150 386 167 13 24 383 6 380 3.54e-97 295
MS.gene96406.t1 MTR_4g118380 51.261 357 151 9 22 359 5 357 1.65e-96 292
MS.gene96406.t1 MTR_5g070080 47.328 393 153 14 24 383 9 380 6.38e-96 291
MS.gene96406.t1 MTR_4g117720 48.138 376 137 11 24 388 50 378 1.62e-95 290
MS.gene96406.t1 MTR_5g097210 47.493 379 170 12 15 384 1 359 4.42e-95 289
MS.gene96406.t1 MTR_8g032390 45.855 386 161 12 7 383 24 370 6.98e-95 288
MS.gene96406.t1 MTR_5g070130 47.423 388 179 14 15 388 1 377 1.09e-93 286
MS.gene96406.t1 MTR_1g055135 44.845 388 183 14 16 388 4 375 8.23e-93 283
MS.gene96406.t1 MTR_4g116320 63.426 216 73 2 175 386 43 256 4.69e-86 262
MS.gene96406.t1 MTR_4g117750 47.354 378 160 12 24 385 2 356 1.43e-85 268
MS.gene96406.t1 MTR_4g117750 60.550 109 41 1 276 384 373 479 5.72e-32 126
MS.gene96406.t1 MTR_4g121580 45.119 379 153 14 15 378 1 339 1.09e-80 253
MS.gene96406.t1 MTR_8g013010 51.812 276 112 8 24 291 53 315 4.71e-80 248
MS.gene96406.t1 MTR_4g116340 55.769 260 82 6 1 251 12 247 3.27e-79 244
MS.gene96406.t1 MTR_1g055165 41.444 374 160 12 17 388 2 318 1.07e-75 237
MS.gene96406.t1 MTR_4g117870 50.190 263 90 8 129 388 43 267 9.07e-72 226
MS.gene96406.t1 MTR_8g040935 55.330 197 85 2 195 388 12 208 6.89e-67 211
MS.gene96406.t1 MTR_1g055195 44.369 293 132 10 106 388 207 478 6.40e-63 209
MS.gene96406.t1 MTR_4g118400 42.756 283 115 9 105 381 52 293 9.09e-63 203
MS.gene96406.t1 MTR_8g433030 51.556 225 99 6 164 383 118 337 1.12e-62 204
MS.gene96406.t1 MTR_8g433030 63.077 65 21 2 7 71 24 85 2.88e-15 76.6
MS.gene96406.t1 MTR_7g079370 40.000 350 172 12 54 381 16 349 4.67e-59 196
MS.gene96406.t1 MTR_4g118370 47.390 249 96 9 145 384 34 256 3.70e-58 190
MS.gene96406.t1 MTR_6g463430 52.356 191 82 4 196 384 15 198 2.58e-55 181
MS.gene96406.t1 MTR_8g102520 37.726 387 164 16 14 388 1 322 6.09e-55 184
MS.gene96406.t1 MTR_4g114700 42.857 266 94 7 124 379 1 218 3.26e-54 179
MS.gene96406.t1 MTR_2g048580 33.854 384 187 15 24 388 7 342 1.37e-51 176
MS.gene96406.t1 MTR_4g117530 42.793 222 84 4 169 388 73 253 6.40e-49 166
MS.gene96406.t1 MTR_7g079400 41.176 272 142 8 130 388 71 337 1.09e-47 165
MS.gene96406.t1 MTR_7g117720 35.849 371 133 14 15 381 1 270 1.60e-44 155
MS.gene96406.t1 MTR_1g055250 42.241 232 113 10 140 360 21 242 7.36e-43 152
MS.gene96406.t1 MTR_1g055175 43.350 203 106 6 191 388 3 201 7.92e-42 146
MS.gene96406.t1 MTR_4g117430 50.000 158 71 4 132 287 3 154 1.99e-40 140
MS.gene96406.t1 MTR_7g079420 38.489 278 113 13 131 388 905 1144 5.06e-38 146
MS.gene96406.t1 MTR_4g122860 44.324 185 70 5 202 381 157 313 2.07e-36 135
MS.gene96406.t1 MTR_4g122860 30.723 166 104 5 11 173 56 213 4.75e-11 63.9
MS.gene96406.t1 MTR_5g023000 62.000 100 36 1 289 388 2 99 2.40e-32 117
MS.gene96406.t1 MTR_4g118360 52.308 130 56 3 261 388 1 126 2.15e-30 113
MS.gene96406.t1 MTR_5g022420 30.178 338 202 15 24 349 26 341 2.72e-30 120
MS.gene96406.t1 MTR_4g107820 28.723 376 222 16 25 380 36 385 1.43e-29 118
MS.gene96406.t1 MTR_4g107780 28.723 376 222 16 25 380 36 385 1.43e-29 118
MS.gene96406.t1 MTR_4g107820 28.723 376 222 16 25 380 36 385 2.30e-29 118
MS.gene96406.t1 MTR_4g107780 28.723 376 222 16 25 380 36 385 2.42e-29 118
MS.gene96406.t1 MTR_3g009310 29.508 305 181 11 25 315 42 326 1.31e-28 115
MS.gene96406.t1 MTR_4g109290 42.857 175 54 6 17 186 2 135 5.17e-28 109
MS.gene96406.t1 MTR_4g109290 61.818 55 19 1 334 388 136 188 1.18e-11 63.5
MS.gene96406.t1 MTR_8g098830 39.674 184 96 7 182 355 16 194 5.30e-28 110
MS.gene96406.t1 MTR_8g101580 27.027 370 236 13 25 380 45 394 7.39e-28 113
MS.gene96406.t1 MTR_3g007360 28.307 378 218 16 28 381 55 403 9.05e-28 113
MS.gene96406.t1 MTR_5g011200 28.994 338 204 16 1 325 1 315 2.17e-27 112
MS.gene96406.t1 MTR_1g056710 27.586 377 227 14 1 354 1 354 8.13e-27 110
MS.gene96406.t1 MTR_4g133170 28.743 334 193 17 25 337 4 313 1.15e-26 110
MS.gene96406.t1 MTR_2g024110 28.205 312 173 14 25 311 4 289 1.73e-26 109
MS.gene96406.t1 MTR_6g090180 26.214 412 251 11 12 381 34 434 1.90e-26 110
MS.gene96406.t1 MTR_4g108820 29.043 303 167 11 21 321 38 294 2.02e-26 108
MS.gene96406.t1 MTR_1g097490 28.455 369 232 14 21 380 45 390 3.35e-26 108
MS.gene96406.t1 MTR_3g007410 27.513 378 221 16 28 381 55 403 5.64e-26 108
MS.gene96406.t1 MTR_3g036290 29.236 301 174 14 25 315 22 293 1.35e-25 106
MS.gene96406.t1 MTR_1g097330 30.061 326 199 13 25 339 16 323 2.45e-25 106
MS.gene96406.t1 MTR_2g426020 27.720 386 232 15 25 379 6 375 6.41e-25 105
MS.gene96406.t1 MTR_3g030250 25.193 389 247 14 7 380 20 379 6.83e-25 105
MS.gene96406.t1 MTR_2g021150 26.146 371 253 14 24 384 13 372 2.12e-24 103
MS.gene96406.t1 MTR_8g467140 27.419 310 196 11 24 321 31 323 2.44e-24 102
MS.gene96406.t1 MTR_3g009240 31.229 301 169 13 25 311 36 312 3.05e-24 103
MS.gene96406.t1 MTR_3g006500 27.273 385 232 17 18 380 11 369 3.58e-24 102
MS.gene96406.t1 MTR_1g094210 26.724 348 216 15 22 355 54 376 3.64e-24 103
MS.gene96406.t1 MTR_2g047832 27.195 353 202 17 24 339 28 362 3.68e-24 103
MS.gene96406.t1 MTR_1g094210 26.273 373 233 16 22 380 54 398 4.10e-24 103
MS.gene96406.t1 MTR_3g006670 28.808 302 182 11 25 311 49 332 5.57e-24 102
MS.gene96406.t1 MTR_6g027910 26.972 393 223 15 25 380 9 374 6.88e-24 102
MS.gene96406.t1 MTR_5g069120 37.234 188 90 6 35 205 1 177 1.06e-23 97.1
MS.gene96406.t1 MTR_2g055970 26.685 356 238 14 9 354 196 538 1.28e-23 102
MS.gene96406.t1 MTR_6g021880 27.198 364 233 13 36 380 31 381 1.54e-23 101
MS.gene96406.t1 MTR_1g068835 26.211 351 199 14 25 349 4 320 1.67e-23 101
MS.gene96406.t1 MTR_3g072470 28.706 425 202 21 28 380 22 417 1.84e-23 101
MS.gene96406.t1 MTR_3g036430 29.568 301 168 10 19 316 15 274 2.06e-23 100
MS.gene96406.t1 MTR_3g083640 28.457 376 221 19 25 380 55 402 2.35e-23 100
MS.gene96406.t1 MTR_2g021190 26.064 376 234 14 25 380 21 372 5.19e-23 99.8
MS.gene96406.t1 MTR_6g004660 27.974 311 184 11 25 311 16 310 7.79e-23 99.4
MS.gene96406.t1 MTR_2g028160 28.090 356 214 14 25 347 5 351 1.01e-22 99.4
MS.gene96406.t1 MTR_4g028510 26.392 413 240 17 16 383 7 400 1.09e-22 99.8
MS.gene96406.t1 MTR_6g065980 28.125 288 185 10 25 311 16 282 1.78e-22 97.8
MS.gene96406.t1 MTR_1g054725 25.773 388 245 15 16 380 8 375 2.18e-22 97.8
MS.gene96406.t1 MTR_6g034720 46.610 118 54 2 155 263 53 170 2.42e-22 94.4
MS.gene96406.t1 MTR_1g097560 28.367 349 203 18 23 354 34 352 2.55e-22 97.8
MS.gene96406.t1 MTR_2g021155 30.492 305 181 15 25 316 36 322 2.77e-22 99.4
MS.gene96406.t1 MTR_4g061340 28.750 320 169 16 25 315 26 315 2.78e-22 97.4
MS.gene96406.t1 MTR_7g013590 27.321 377 243 13 28 388 39 400 2.92e-22 97.8
MS.gene96406.t1 MTR_3g011120 26.934 349 219 14 23 349 12 346 3.34e-22 97.4
MS.gene96406.t1 MTR_5g057710 30.032 313 171 15 25 316 46 331 3.79e-22 97.4
MS.gene96406.t1 MTR_2g029990 27.100 369 237 16 26 380 52 402 4.20e-22 97.4
MS.gene96406.t1 MTR_3g014540 26.433 314 183 12 25 316 29 316 4.36e-22 97.1
MS.gene96406.t1 MTR_4g030830 25.067 375 225 12 25 356 9 370 4.82e-22 97.1
MS.gene96406.t1 MTR_7g407070 27.219 338 213 13 25 337 32 361 5.15e-22 97.1
MS.gene96406.t1 MTR_3g007330 27.575 301 187 9 25 315 48 327 6.01e-22 96.7
MS.gene96406.t1 MTR_2g028140 27.692 325 185 16 25 311 5 317 6.89e-22 97.1
MS.gene96406.t1 MTR_3g010390 26.099 364 229 13 25 360 33 384 7.41e-22 96.7
MS.gene96406.t1 MTR_3g013770 27.105 380 219 14 25 372 33 386 7.43e-22 96.7
MS.gene96406.t1 MTR_2g078900 26.974 304 188 12 25 316 33 314 7.45e-22 95.9
MS.gene96406.t1 MTR_5g057790 29.299 314 172 13 25 316 46 331 8.02e-22 96.7
MS.gene96406.t1 MTR_3g010620 28.923 325 190 16 3 316 12 306 8.74e-22 96.3
MS.gene96406.t1 MTR_2g046900 27.557 352 220 16 24 354 27 364 1.06e-21 95.9
MS.gene96406.t1 MTR_2g104340 25.481 416 246 16 10 383 1 394 2.29e-21 95.1
MS.gene96406.t1 MTR_2g021770 25.000 408 257 16 18 383 5 405 2.75e-21 95.1
MS.gene96406.t1 MTR_3g464500 25.648 347 208 13 24 335 26 357 2.79e-21 95.1
MS.gene96406.t1 MTR_7g007300 27.451 306 185 12 25 319 103 382 3.24e-21 95.1
MS.gene96406.t1 MTR_7g057270 28.443 334 189 15 25 322 26 345 3.26e-21 95.1
MS.gene96406.t1 MTR_1g068875 26.426 333 203 14 25 337 4 314 4.09e-21 94.4
MS.gene96406.t1 MTR_0667s0010 25.556 360 214 14 25 351 6 344 4.82e-21 94.4
MS.gene96406.t1 MTR_2g046920 26.316 304 203 10 24 320 23 312 6.65e-21 93.6
MS.gene96406.t1 MTR_0054s0090 26.667 420 241 18 15 383 1 404 1.09e-20 93.2
MS.gene96406.t1 MTR_2g028130 27.492 331 180 16 25 315 5 315 1.30e-20 93.2
MS.gene96406.t1 MTR_3g011060 29.487 312 186 15 25 316 28 325 1.35e-20 92.8
MS.gene96406.t1 MTR_3g013740 28.024 339 204 14 2 316 21 343 1.40e-20 93.2
MS.gene96406.t1 MTR_1g068860 27.760 317 176 14 25 315 4 293 1.67e-20 92.4
MS.gene96406.t1 MTR_7g079450 42.958 142 74 4 247 388 3 137 2.10e-20 87.0
MS.gene96406.t1 MTR_3g014570 25.890 309 189 13 25 315 29 315 2.16e-20 92.0
MS.gene96406.t1 MTR_2g021050 28.060 335 190 16 25 337 5 310 2.20e-20 92.0
MS.gene96406.t1 MTR_4g117550 26.382 398 213 19 24 383 16 371 3.58e-20 91.3
MS.gene96406.t1 MTR_3g010970 28.618 304 169 14 28 316 51 321 3.80e-20 91.7
MS.gene96406.t1 MTR_3g010870 27.010 311 177 13 25 316 37 316 4.12e-20 91.3
MS.gene96406.t1 MTR_3g436150 28.042 378 233 16 25 380 32 392 4.44e-20 91.3
MS.gene96406.t1 MTR_4g028660 27.348 362 206 16 16 336 7 352 4.83e-20 91.3
MS.gene96406.t1 MTR_4g027450 27.348 362 206 16 16 336 7 352 4.83e-20 91.3
MS.gene96406.t1 MTR_3g023930 27.761 335 181 15 2 316 6 299 5.29e-20 90.9
MS.gene96406.t1 MTR_4g055060 27.010 311 188 11 25 315 30 321 5.36e-20 91.3
MS.gene96406.t1 MTR_7g028660 26.923 364 213 13 22 350 8 353 6.16e-20 90.9
MS.gene96406.t1 MTR_3g010590 25.326 383 223 15 25 380 39 385 6.56e-20 90.9
MS.gene96406.t1 MTR_3g096250 27.000 300 157 10 25 316 47 292 7.14e-20 90.1
MS.gene96406.t1 MTR_4g037465 26.992 389 216 15 16 360 12 376 8.34e-20 90.5
MS.gene96406.t1 MTR_3g024110 26.910 301 188 12 25 316 101 378 8.36e-20 90.9
MS.gene96406.t1 MTR_3g024150 26.975 367 235 15 28 380 38 385 1.06e-19 90.1
MS.gene96406.t1 MTR_4g023430 55.128 78 34 1 308 384 141 218 1.09e-19 87.4
MS.gene96406.t1 MTR_4g023430 64.706 68 21 2 4 71 22 86 5.83e-18 82.4
MS.gene96406.t1 MTR_3g030240 25.210 357 215 15 25 363 40 362 1.13e-19 90.1
MS.gene96406.t1 MTR_8g012090 26.567 335 181 15 33 339 24 321 1.31e-19 89.4
MS.gene96406.t1 MTR_3g007430 27.832 309 176 13 28 315 46 328 1.33e-19 90.1
MS.gene96406.t1 MTR_3g083010 26.817 399 238 15 25 380 6 393 1.39e-19 90.1
MS.gene96406.t1 MTR_3g006570 27.362 307 187 13 25 316 21 306 1.42e-19 89.7
MS.gene96406.t1 MTR_8g099460 26.480 321 182 14 25 315 5 301 1.44e-19 90.1
MS.gene96406.t1 MTR_7g070880 25.659 417 242 15 21 381 17 421 1.62e-19 90.1
MS.gene96406.t1 MTR_5g059430 26.619 417 238 19 24 386 25 427 1.62e-19 90.1
MS.gene96406.t1 MTR_7g061060 27.500 320 189 12 19 311 7 310 1.69e-19 89.7
MS.gene96406.t1 MTR_1g088120 27.005 374 196 17 22 339 7 359 1.73e-19 89.7
MS.gene96406.t1 MTR_2g021252 25.373 335 212 13 28 351 50 357 2.01e-19 89.4
MS.gene96406.t1 MTR_3g010920 27.407 405 226 19 2 380 19 381 2.15e-19 89.4
MS.gene96406.t1 MTR_4g031770 25.879 313 191 11 25 319 4 293 2.36e-19 89.0
MS.gene96406.t1 MTR_0128s0070 28.226 372 198 18 25 351 22 369 2.62e-19 89.4
MS.gene96406.t1 MTR_2g025420 24.311 399 230 17 25 378 6 377 3.50e-19 89.0
MS.gene96406.t1 MTR_2g046830 28.115 313 201 13 24 327 24 321 4.35e-19 88.6
MS.gene96406.t1 MTR_5g057690 28.526 312 167 14 25 316 46 321 4.36e-19 88.6
MS.gene96406.t1 MTR_4g122840 41.304 138 43 4 252 388 164 264 5.52e-19 86.3
MS.gene96406.t1 MTR_2g426070 27.907 344 203 14 26 337 7 337 5.79e-19 88.2
MS.gene96406.t1 MTR_7g055930 27.089 395 210 15 25 351 13 397 5.81e-19 88.6
MS.gene96406.t1 MTR_4g070550 26.957 345 192 15 25 325 5 333 5.82e-19 88.2
MS.gene96406.t1 MTR_4g024890 23.737 396 243 14 24 380 9 384 5.84e-19 88.2
MS.gene96406.t1 MTR_7g056003 29.305 331 175 16 21 313 11 320 6.48e-19 88.2
MS.gene96406.t1 MTR_1g055055 24.316 329 203 13 1 317 1 295 6.97e-19 87.4
MS.gene96406.t1 MTR_1g055070 28.881 277 167 12 25 278 49 318 7.73e-19 87.8
MS.gene96406.t1 MTR_2g022000 25.537 419 239 17 24 386 15 416 8.36e-19 88.2
MS.gene96406.t1 MTR_6g053240 27.070 314 187 14 25 316 28 321 1.05e-18 87.4
MS.gene96406.t1 MTR_7g055870 27.735 393 210 16 25 351 13 397 1.18e-18 87.4
MS.gene96406.t1 MTR_8g039500 26.957 345 217 13 24 346 11 342 1.42e-18 86.3
MS.gene96406.t1 MTR_0129s0070 25.385 390 238 16 28 381 20 392 1.49e-18 87.0
MS.gene96406.t1 MTR_3g010430 26.000 350 184 16 10 316 6 323 1.67e-18 87.0
MS.gene96406.t1 MTR_1g115160 25.890 309 200 13 20 320 17 304 1.79e-18 86.3
MS.gene96406.t1 MTR_7g070830 26.146 371 210 14 20 337 16 375 1.81e-18 87.0
MS.gene96406.t1 MTR_3g030330 27.134 328 183 15 11 316 4 297 1.86e-18 86.3
MS.gene96406.t1 MTR_7g069550 26.859 417 230 20 10 377 1 391 1.91e-18 86.7
MS.gene96406.t1 MTR_0128s0020 28.460 383 211 20 12 351 4 366 2.03e-18 86.7
MS.gene96406.t1 MTR_0267s0050 26.542 373 226 14 20 356 2 362 2.11e-18 86.3
MS.gene96406.t1 MTR_2g021800 26.077 418 229 21 24 381 15 412 2.15e-18 86.7
MS.gene96406.t1 MTR_2g025960 29.137 278 158 12 130 372 6 279 2.19e-18 85.5
MS.gene96406.t1 MTR_0707s0020 25.000 440 242 19 15 379 16 442 2.22e-18 86.7
MS.gene96406.t1 MTR_6g007135 26.862 376 243 16 25 380 26 389 2.23e-18 86.3
MS.gene96406.t1 MTR_4g013185 26.542 373 209 13 22 337 7 371 2.77e-18 86.3
MS.gene96406.t1 MTR_1g050542 23.433 367 250 12 25 380 58 404 3.06e-18 86.3
MS.gene96406.t1 MTR_4g013180 27.812 320 187 12 24 313 10 315 3.09e-18 86.7
MS.gene96406.t1 MTR_5g097680 23.799 437 253 17 12 383 4 425 3.39e-18 86.3
MS.gene96406.t1 MTR_7g060940 27.296 392 233 16 22 379 19 392 3.40e-18 85.9
MS.gene96406.t1 MTR_7g060960 28.402 338 173 15 22 335 29 321 3.68e-18 85.5
MS.gene96406.t1 MTR_2g426090 27.500 320 182 16 28 315 9 310 4.09e-18 85.9
MS.gene96406.t1 MTR_3g011100 26.452 310 182 12 25 311 235 521 4.13e-18 86.7
MS.gene96406.t1 MTR_2g078850 27.687 307 179 13 28 316 33 314 4.28e-18 85.5
MS.gene96406.t1 MTR_5g069390 27.384 409 230 24 24 383 25 415 4.39e-18 86.3
MS.gene96406.t1 MTR_0054s0100 25.298 419 250 17 12 383 4 406 4.62e-18 85.5
MS.gene96406.t1 MTR_7g066030 25.564 399 219 17 3 349 2 374 4.69e-18 85.5
MS.gene96406.t1 MTR_7g061050 26.970 330 197 12 19 322 7 318 4.73e-18 85.5
MS.gene96406.t1 MTR_7g017040 24.826 431 230 19 13 385 3 397 5.03e-18 85.5
MS.gene96406.t1 MTR_4g013175 24.623 398 227 13 22 357 7 393 5.12e-18 85.5
MS.gene96406.t1 MTR_0044s0300 27.124 306 186 13 25 316 38 320 6.17e-18 85.1
MS.gene96406.t1 MTR_7g091630 26.036 338 195 13 24 323 31 351 7.17e-18 85.1
MS.gene96406.t1 MTR_2g425980 26.667 390 232 17 25 379 5 375 7.24e-18 85.1
MS.gene96406.t1 MTR_0760s0010 27.491 291 188 12 30 316 52 323 7.72e-18 84.7
MS.gene96406.t1 MTR_4g028750 28.358 335 191 13 15 311 6 329 8.00e-18 84.7
MS.gene96406.t1 MTR_1g054575 27.907 301 188 14 25 316 52 332 8.73e-18 85.5
MS.gene96406.t1 MTR_7g066840 26.431 367 222 16 25 357 23 375 8.75e-18 84.7
MS.gene96406.t1 MTR_6g086825 26.238 404 240 18 24 383 69 458 9.06e-18 85.1
MS.gene96406.t1 MTR_8g073550 31.863 204 116 8 24 216 29 220 1.28e-17 81.6
MS.gene96406.t1 MTR_8g063440 26.154 390 235 17 24 381 11 379 1.43e-17 84.0
MS.gene96406.t1 MTR_0097s0030 24.242 363 225 11 25 357 14 356 1.44e-17 84.0
MS.gene96406.t1 MTR_2g047240 24.242 363 225 11 25 357 14 356 1.44e-17 84.0
MS.gene96406.t1 MTR_1g115185 25.449 334 215 8 2 319 15 330 1.81e-17 84.0
MS.gene96406.t1 MTR_2g461450 23.513 353 230 10 25 356 18 351 1.86e-17 83.2
MS.gene96406.t1 MTR_2g031680 25.301 332 202 14 25 334 6 313 1.91e-17 83.6
MS.gene96406.t1 MTR_5g022045 26.667 345 209 13 25 333 35 371 2.13e-17 84.0
MS.gene96406.t1 MTR_5g072060 28.533 368 201 19 24 356 5 345 2.29e-17 84.3
MS.gene96406.t1 MTR_7g016930 25.648 347 172 18 10 312 1 305 2.52e-17 82.8
MS.gene96406.t1 MTR_7g070440 26.462 325 193 13 24 321 6 311 2.64e-17 83.2
MS.gene96406.t1 MTR_4g130330 27.094 406 228 21 24 383 6 389 2.67e-17 83.2
MS.gene96406.t1 MTR_0115s0020 24.937 397 251 17 25 383 10 397 2.74e-17 83.2
MS.gene96406.t1 MTR_7g061090 27.640 322 188 14 24 311 21 331 3.25e-17 83.2
MS.gene96406.t1 MTR_1g114700 26.752 314 190 11 25 319 29 321 3.59e-17 82.8
MS.gene96406.t1 MTR_8g032980 23.744 438 235 18 16 381 7 417 3.72e-17 82.8
MS.gene96406.t1 MTR_7g055987 29.126 309 173 15 28 313 23 308 3.97e-17 82.4
MS.gene96406.t1 MTR_2g047892 23.196 388 234 14 11 355 6 372 4.30e-17 82.8
MS.gene96406.t1 MTR_7g056760 26.942 412 243 19 12 380 8 404 4.68e-17 82.4
MS.gene96406.t1 MTR_3g464470 24.566 346 210 12 24 335 6 334 4.81e-17 82.4
MS.gene96406.t1 MTR_5g010560 28.571 336 182 15 25 310 44 371 5.29e-17 82.8
MS.gene96406.t1 MTR_0464s0020 25.948 343 176 14 25 313 23 341 5.92e-17 82.4
MS.gene96406.t1 MTR_5g010610 26.932 427 224 20 25 388 34 435 5.94e-17 82.8
MS.gene96406.t1 MTR_3g437520 26.355 406 207 21 28 360 26 412 6.40e-17 82.4
MS.gene96406.t1 MTR_6g048140 26.513 347 189 15 25 337 39 353 8.12e-17 82.0
MS.gene96406.t1 MTR_7g062100 25.779 353 200 13 25 337 24 354 8.31e-17 81.6
MS.gene96406.t1 MTR_7g062060 28.529 333 198 16 24 321 11 338 9.03e-17 81.6
MS.gene96406.t1 MTR_5g010550 27.765 425 228 21 25 388 58 464 9.14e-17 82.0
MS.gene96406.t1 MTR_4g030090 26.970 330 190 14 15 311 4 315 9.20e-17 81.6
MS.gene96406.t1 MTR_5g010550 27.765 425 228 21 25 388 44 450 9.27e-17 82.0
MS.gene96406.t1 MTR_0064s0160 25.897 390 228 19 23 358 40 422 9.78e-17 82.0
MS.gene96406.t1 MTR_3g030350 29.450 309 165 16 25 311 35 312 1.02e-16 81.3
MS.gene96406.t1 MTR_1g058190 25.806 310 181 8 24 319 34 308 1.03e-16 81.3
MS.gene96406.t1 MTR_6g086920 24.396 455 242 21 15 380 28 469 1.05e-16 82.0
MS.gene96406.t1 MTR_5g057020 28.571 308 167 15 25 316 46 316 1.07e-16 80.9
MS.gene96406.t1 MTR_5g007610 26.943 386 226 20 25 380 41 400 1.19e-16 81.3
MS.gene96406.t1 MTR_5g048160 25.436 401 239 20 25 381 4 388 1.26e-16 81.3
MS.gene96406.t1 MTR_2g026010 27.586 319 178 14 25 315 4 297 1.45e-16 80.9
MS.gene96406.t1 MTR_3g013950 25.000 388 235 14 28 377 9 378 1.48e-16 80.9
MS.gene96406.t1 MTR_6g016285 25.455 440 248 17 8 385 4 425 1.73e-16 81.3
MS.gene96406.t1 MTR_2g034700 25.779 353 215 16 24 355 13 339 2.27e-16 80.1
MS.gene96406.t1 MTR_5g021880 27.089 347 186 15 25 311 39 378 2.60e-16 80.9
MS.gene96406.t1 MTR_4g028680 25.905 359 216 14 16 336 7 353 2.92e-16 80.1
MS.gene96406.t1 MTR_5g096910 26.303 403 227 19 24 383 16 391 3.14e-16 80.1
MS.gene96406.t1 MTR_5g021880 27.089 347 186 15 25 311 39 378 3.18e-16 80.5
MS.gene96406.t1 MTR_1g112930 27.451 306 189 11 22 316 22 305 3.93e-16 79.7
MS.gene96406.t1 MTR_5g021880 27.089 347 186 15 25 311 39 378 4.02e-16 80.1
MS.gene96406.t1 MTR_3g011020 27.564 312 177 13 25 318 28 308 6.22e-16 79.0
MS.gene96406.t1 MTR_7g078860 25.581 344 216 14 19 332 3 336 6.66e-16 79.0
MS.gene96406.t1 MTR_2g043400 28.704 324 173 16 28 313 26 329 7.26e-16 79.0
MS.gene96406.t1 MTR_3g009260 28.716 296 174 15 28 311 44 314 7.67e-16 79.0
MS.gene96406.t1 MTR_5g009060 26.332 319 198 12 25 311 25 338 8.14e-16 79.0
MS.gene96406.t1 MTR_2g047200 24.935 385 210 14 22 356 17 372 8.49e-16 78.6
MS.gene96406.t1 MTR_5g008530 71.930 57 14 2 25 81 18 72 8.60e-16 72.0
MS.gene96406.t1 MTR_7g055977 27.586 406 216 17 24 381 6 381 9.82e-16 78.6
MS.gene96406.t1 MTR_4g080200 25.000 372 207 16 25 361 3 337 1.12e-15 77.8
MS.gene96406.t1 MTR_3g010520 26.623 308 182 15 18 316 19 291 1.24e-15 77.8
MS.gene96406.t1 MTR_7g056290 24.706 425 219 18 28 380 25 420 1.26e-15 78.6
MS.gene96406.t1 MTR_0129s0120 25.676 370 200 16 28 349 20 362 1.36e-15 78.2
MS.gene96406.t1 MTR_4g129190 25.783 415 220 19 25 381 6 390 1.67e-15 77.8
MS.gene96406.t1 MTR_7g079640 24.869 382 235 17 10 364 1 357 1.76e-15 77.8
MS.gene96406.t1 MTR_2g043410 27.744 328 171 14 28 313 25 328 1.76e-15 77.8
MS.gene96406.t1 MTR_4g033495 27.083 336 195 17 22 321 24 345 1.80e-15 78.2
MS.gene96406.t1 MTR_8g062660 23.785 391 231 17 25 380 22 380 1.84e-15 78.6
MS.gene96406.t1 MTR_5g046300 21.958 378 242 13 25 380 4 350 2.08e-15 77.0
MS.gene96406.t1 MTR_5g046290 21.958 378 242 13 25 380 4 350 2.08e-15 77.0
MS.gene96406.t1 MTR_2g426060 26.269 335 194 16 25 325 6 321 2.22e-15 77.4
MS.gene96406.t1 MTR_6g013270 23.718 312 215 10 19 319 23 322 2.28e-15 77.4
MS.gene96406.t1 MTR_1g061330 23.836 365 230 16 25 360 4 349 2.63e-15 77.4
MS.gene96406.t1 MTR_3g036335 26.202 416 233 22 2 380 16 394 3.00e-15 77.0
MS.gene96406.t1 MTR_8g064890 24.390 328 201 13 16 311 7 319 3.59e-15 76.6
MS.gene96406.t1 MTR_7g067680 25.799 407 213 20 1 372 24 376 3.90e-15 76.6
MS.gene96406.t1 MTR_6g048120 24.561 399 237 16 22 380 33 407 4.32e-15 76.6
MS.gene96406.t1 MTR_0831s0010 26.836 354 204 15 18 337 43 375 4.43e-15 76.6
MS.gene96406.t1 MTR_7g111700 25.823 395 235 17 12 382 2 362 4.96e-15 76.3
MS.gene96406.t1 MTR_2g047878 25.445 393 224 19 17 380 11 363 6.03e-15 75.9
MS.gene96406.t1 MTR_7g056503 25.313 399 254 20 16 380 9 397 7.11e-15 75.9
MS.gene96406.t1 MTR_2g024100 27.796 313 173 14 32 311 14 306 7.19e-15 75.9
MS.gene96406.t1 MTR_3g080370 25.369 406 228 15 10 356 6 395 7.24e-15 76.3
MS.gene96406.t1 MTR_5g096630 26.103 272 165 9 25 264 18 285 9.02e-15 75.9
MS.gene96406.t1 MTR_8g013005 60.000 60 20 2 330 388 3 59 9.89e-15 68.6
MS.gene96406.t1 MTR_2g031720 26.415 318 183 15 25 315 6 299 1.13e-14 75.5
MS.gene96406.t1 MTR_7g017130 26.570 414 239 20 12 383 5 395 1.28e-14 75.1
MS.gene96406.t1 MTR_8g046200 26.331 357 199 14 16 315 7 356 1.30e-14 75.5
MS.gene96406.t1 MTR_6g046320 25.989 354 197 14 25 323 39 382 1.54e-14 75.1
MS.gene96406.t1 MTR_1g037540 25.203 369 222 14 28 355 8 363 1.95e-14 74.7
MS.gene96406.t1 MTR_2g104280 24.697 413 236 17 24 383 13 403 2.01e-14 74.7
MS.gene96406.t1 MTR_4g102410 25.432 405 241 20 24 383 60 448 2.03e-14 74.7
MS.gene96406.t1 MTR_5g069930 24.363 353 219 14 24 344 5 341 2.35e-14 74.3
MS.gene96406.t1 MTR_2g046800 26.829 328 191 15 25 316 14 328 2.42e-14 74.3
MS.gene96406.t1 MTR_7g017170 26.190 420 245 19 12 383 5 407 2.54e-14 74.3
MS.gene96406.t1 MTR_2g021950 23.934 422 242 23 10 381 1 393 3.05e-14 73.9
MS.gene96406.t1 MTR_8g033110 23.185 427 235 15 24 383 13 413 3.69e-14 73.9
MS.gene96406.t1 MTR_8g066440 25.134 374 229 16 25 359 23 384 3.83e-14 73.9
MS.gene96406.t1 MTR_0649s0020 26.329 414 230 18 15 380 1 387 4.15e-14 73.6
MS.gene96406.t1 MTR_7g066010 23.834 386 189 16 24 358 20 351 4.62e-14 73.2
MS.gene96406.t1 MTR_3g024040 27.596 366 217 18 32 380 38 372 4.68e-14 73.2
MS.gene96406.t1 MTR_6g017280 25.397 315 196 13 25 313 9 310 5.03e-14 73.2
MS.gene96406.t1 MTR_3g007300 27.346 373 199 16 25 380 49 366 5.37e-14 73.2
MS.gene96406.t1 MTR_4g008790 25.995 377 197 14 22 337 36 391 5.59e-14 73.6
MS.gene96406.t1 MTR_6g004210 25.076 331 197 13 36 326 36 355 6.02e-14 73.2
MS.gene96406.t1 MTR_1g055375 24.919 309 200 12 28 319 7 300 6.76e-14 72.8
MS.gene96406.t1 MTR_1g007450 26.211 351 207 11 25 336 12 349 8.26e-14 72.8
MS.gene96406.t1 MTR_4g055820 25.600 375 212 18 10 336 1 356 8.89e-14 72.4
MS.gene96406.t1 MTR_5g068040 26.582 316 181 10 22 313 13 301 9.39e-14 72.4
MS.gene96406.t1 MTR_6g055210 24.847 326 203 13 24 318 21 335 1.24e-13 72.4
MS.gene96406.t1 MTR_1g055200 43.564 101 44 4 124 213 1 99 1.31e-13 67.0
MS.gene96406.t1 MTR_5g022090 28.391 317 151 16 25 312 34 303 1.45e-13 72.0
MS.gene96406.t1 MTR_7g056200 26.287 369 197 16 24 352 22 355 1.52e-13 72.0
MS.gene96406.t1 MTR_3g058480 28.470 281 155 14 25 279 39 299 1.70e-13 71.2
MS.gene96406.t1 MTR_2g010920 23.796 353 219 13 4 313 2 347 1.82e-13 72.0
MS.gene96406.t1 MTR_3g058470 25.595 336 182 14 25 337 37 327 1.91e-13 71.6
MS.gene96406.t1 MTR_1g442850 25.938 320 183 15 24 311 4 301 2.35e-13 71.2
MS.gene96406.t1 MTR_3g023940 25.890 309 191 14 25 316 34 321 2.54e-13 71.2
MS.gene96406.t1 MTR_7g056710 26.471 306 196 11 22 311 15 307 2.71e-13 71.2
MS.gene96406.t1 MTR_1g053510 25.074 339 188 15 28 315 18 341 3.38e-13 70.9
MS.gene96406.t1 MTR_5g046260 22.753 356 213 12 25 380 4 297 3.64e-13 70.1
MS.gene96406.t1 MTR_8g013000 23.706 367 217 13 24 345 9 357 3.66e-13 70.9
MS.gene96406.t1 MTR_7g077970 25.193 389 236 17 25 374 7 379 3.93e-13 70.9
MS.gene96406.t1 MTR_7g078840 25.648 347 191 15 22 313 7 341 4.02e-13 70.9
MS.gene96406.t1 MTR_5g024260 25.272 368 208 17 15 336 12 358 4.98e-13 70.5
MS.gene96406.t1 MTR_4g019990 23.034 356 216 13 24 337 5 344 5.03e-13 70.5
MS.gene96406.t1 MTR_7g050480 27.044 318 176 14 24 311 21 312 6.39e-13 70.1
MS.gene96406.t1 MTR_7g061010 25.798 376 222 15 22 363 19 371 6.82e-13 69.7
MS.gene96406.t1 MTR_5g057643 29.707 239 127 10 25 244 46 262 7.05e-13 68.6
MS.gene96406.t1 MTR_3g010440 26.190 294 140 12 25 311 26 249 8.49e-13 69.3
MS.gene96406.t1 MTR_7g050520 26.730 318 177 14 24 311 21 312 9.11e-13 69.7
MS.gene96406.t1 MTR_2g066170 23.907 389 252 16 24 383 11 384 1.03e-12 69.3
MS.gene96406.t1 MTR_5g097220 23.558 416 229 15 28 381 16 404 1.14e-12 69.3
MS.gene96406.t1 MTR_4g023100 56.897 58 21 1 330 387 65 118 1.21e-12 64.7
MS.gene96406.t1 MTR_2g010900 24.127 315 190 12 43 322 1 301 1.82e-12 68.6
MS.gene96406.t1 MTR_3g009250 31.390 223 122 11 28 240 44 245 2.08e-12 67.0
MS.gene96406.t1 MTR_5g096710 29.022 317 176 14 25 311 23 320 2.15e-12 68.6
MS.gene96406.t1 MTR_2g010950 22.738 409 265 12 12 380 7 404 2.24e-12 68.6
MS.gene96406.t1 MTR_8g041270 23.005 426 243 16 16 383 6 404 2.29e-12 68.6
MS.gene96406.t1 MTR_3g011650 29.778 225 126 11 28 241 82 285 2.61e-12 67.4
MS.gene96406.t1 MTR_7g066100 23.951 405 241 17 24 381 10 394 2.70e-12 68.2
MS.gene96406.t1 MTR_4g011660 24.927 341 181 12 25 311 19 338 2.88e-12 68.2
MS.gene96406.t1 MTR_7g056797 26.100 341 190 12 15 309 1 325 3.49e-12 67.8
MS.gene96406.t1 MTR_3g006530 24.262 305 203 13 25 316 40 329 3.83e-12 67.8
MS.gene96406.t1 MTR_1g097370 28.750 160 99 7 171 320 135 289 4.32e-12 67.8
MS.gene96406.t1 MTR_0242s0060 27.523 327 192 15 22 313 6 322 4.60e-12 67.4
MS.gene96406.t1 MTR_0242s0040 27.523 327 192 15 22 313 6 322 4.60e-12 67.4
MS.gene96406.t1 MTR_3g096280 25.862 290 162 11 37 311 17 268 6.41e-12 66.6
MS.gene96406.t1 MTR_1g009110 26.575 365 211 17 23 355 12 351 7.57e-12 66.6
MS.gene96406.t1 MTR_5g057040 32.941 170 93 7 25 184 46 204 9.24e-12 67.4
MS.gene96406.t1 MTR_0134s0060 21.789 436 249 18 14 383 1 410 9.98e-12 66.6
MS.gene96406.t1 MTR_1g071010 27.381 252 143 12 25 253 15 249 1.45e-11 65.9
MS.gene96406.t1 MTR_5g023570 38.655 119 56 5 23 139 35 138 1.46e-11 62.4
MS.gene96406.t1 MTR_8g467670 23.750 320 190 9 24 311 13 310 1.46e-11 65.9
MS.gene96406.t1 MTR_7g052150 26.543 324 181 14 22 313 19 317 1.79e-11 65.5
MS.gene96406.t1 MTR_1g055145 42.553 94 49 4 28 120 36 125 4.08e-11 63.5
MS.gene96406.t1 MTR_3g024130 25.620 242 148 10 91 315 24 250 4.51e-11 63.9
MS.gene96406.t1 MTR_3g058440 27.016 248 145 10 25 253 35 265 5.41e-11 63.5
MS.gene96406.t1 MTR_4g030760 23.546 361 221 14 25 356 73 407 5.49e-11 64.3
MS.gene96406.t1 MTR_7g055830 26.299 308 168 13 129 383 58 359 9.98e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene96406.t1 AT4G12560 26.735 389 240 17 25 385 4 375 1.92e-30 121
MS.gene96406.t1 AT4G12560 26.735 389 240 17 25 385 4 375 1.92e-30 121
MS.gene96406.t1 AT4G12560 26.735 389 240 17 25 385 4 375 1.92e-30 121
MS.gene96406.t1 AT3G06240 27.089 395 238 14 25 380 36 419 2.61e-28 115
MS.gene96406.t1 AT4G22390 28.141 398 223 19 26 388 5 374 1.64e-25 107
MS.gene96406.t1 AT4G22390 28.141 398 223 19 26 388 5 374 1.90e-25 107
MS.gene96406.t1 AT3G16210 28.713 303 178 16 21 317 1 271 4.01e-22 97.1
MS.gene96406.t1 AT2G27520 25.414 362 198 13 25 354 6 327 6.49e-17 81.6
MS.gene96406.t1 AT3G10430 25.952 289 178 12 25 302 5 268 2.98e-14 73.9
MS.gene96406.t1 AT3G17480 23.077 312 217 12 14 313 1 301 5.70e-14 73.2
MS.gene96406.t1 AT3G49980 24.765 319 213 11 25 332 6 308 1.19e-13 72.4
MS.gene96406.t1 AT3G49980 24.765 319 213 11 25 332 5 307 1.31e-13 72.0
MS.gene96406.t1 AT3G52320 24.719 356 218 20 25 361 27 351 1.43e-12 68.9
MS.gene96406.t1 AT1G30790 23.659 317 205 11 24 317 8 310 1.70e-12 68.9
MS.gene96406.t1 AT3G18330 25.559 313 195 12 25 317 6 300 2.14e-12 68.6
MS.gene96406.t1 AT5G50220 23.837 344 203 16 2 337 10 302 8.13e-12 66.6
MS.gene96406.t1 AT1G47790 24.793 242 167 7 25 264 25 253 9.28e-12 66.6
MS.gene96406.t1 AT1G33530 24.679 312 202 12 9 312 81 367 1.14e-11 66.2
MS.gene96406.t1 AT3G18910 23.899 318 206 13 20 317 3 304 1.27e-11 66.2
MS.gene96406.t1 AT3G44120 25.407 307 198 14 25 315 6 297 1.29e-11 65.9
MS.gene96406.t1 AT3G21410 24.667 300 190 11 25 311 38 314 7.16e-11 63.9

Find 73 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATTACATTTGATTTAA+TGG 0.052331 7.1:-56240516 MS.gene96406:CDS
TTGGAGAATTTCTCAGTTTA+TGG 0.111007 7.1:-56240421 MS.gene96406:CDS
AATAGTTTCAGTTATCTTTA+TGG 0.111808 7.1:-56240767 MS.gene96406:CDS
AATATTAATTTGTGGGTATT+TGG 0.124164 7.1:-56240440 MS.gene96406:CDS
TTCAGTTATCTTTATGGATT+TGG 0.171450 7.1:-56240761 MS.gene96406:CDS
TGTCATTATACTTCAGTAAT+TGG 0.202744 7.1:+56240228 None:intergenic
AAATCAAATGTAATTATAAT+TGG 0.209676 7.1:+56240521 None:intergenic
TGTAGACCATATTGGGTAAA+AGG 0.239812 7.1:+56240286 None:intergenic
ACGACACCCACTTGTAAAAT+TGG 0.258753 7.1:-56241247 MS.gene96406:CDS
ATAGTTGGGTCACTCTTTAA+TGG 0.271301 7.1:-56240584 MS.gene96406:CDS
ACTCTTGTTCTTCCTATTGA+TGG 0.297614 7.1:-56240323 MS.gene96406:CDS
TTCTAGAGCATGGATCATTC+TGG 0.318847 7.1:-56240196 MS.gene96406:CDS
CCACTTGTAAAATTGGAAAA+AGG 0.324725 7.1:-56241240 MS.gene96406:CDS
TGGAGAATTTCTCAGTTTAT+GGG 0.329245 7.1:-56240420 MS.gene96406:CDS
CACTATTCTGATCACATAGT+TGG 0.336098 7.1:-56240599 MS.gene96406:CDS
TCAGTTATCTTTATGGATTT+GGG 0.339373 7.1:-56240760 MS.gene96406:CDS
CTAATGAAAGAGTTGAAATA+TGG 0.341411 7.1:-56240385 MS.gene96406:CDS
TGTTTGTAAACTCCAGTTGA+TGG 0.347916 7.1:+56240815 None:intergenic
TCAAATTCTGCTGAGGTTGC+GGG 0.354361 7.1:-56241164 MS.gene96406:CDS
AATTAATATTATTAGTTGAA+TGG 0.363713 7.1:+56240453 None:intergenic
TTCAAATTCTGCTGAGGTTG+CGG 0.371997 7.1:-56241165 MS.gene96406:CDS
CTGAAACTATTTGAATCATT+AGG 0.373771 7.1:+56240779 None:intergenic
AACTAATAATATTAATTTGT+GGG 0.376387 7.1:-56240447 MS.gene96406:CDS
TCTTTAATGGAGCTATTCAT+TGG 0.379072 7.1:-56240571 MS.gene96406:CDS
TCAGAATAGTGAAGAACATA+TGG 0.391022 7.1:+56240611 None:intergenic
AATACAAAGTTCATTCATCT+TGG 0.391506 7.1:-56240352 MS.gene96406:CDS
TGGGACGGTCCACTTCCATT+TGG 0.399776 7.1:-56240176 MS.gene96406:CDS
TAATGGGCTGTTCGCATTTG+AGG 0.409349 7.1:-56240685 MS.gene96406:CDS
GTTTAATAAAATTAGGGATC+GGG 0.411705 7.1:+56240939 None:intergenic
ATCTTTAGATTGTGAAGCAT+TGG 0.413376 7.1:-56240993 MS.gene96406:CDS
TCAAATGTGTTTGTAAGCCT+TGG 0.424516 7.1:-56241123 MS.gene96406:CDS
ATCATATGGAATCCATCAAC+TGG 0.425958 7.1:-56240827 MS.gene96406:CDS
TAATGGAGCTATTCATTGGT+TGG 0.434950 7.1:-56240567 MS.gene96406:CDS
GAGTCTTTGCTTTCACTCAC+TGG 0.446745 7.1:-56240131 MS.gene96406:CDS
TTTCATTGAGAGATAATACT+TGG 0.452810 7.1:-56240658 MS.gene96406:CDS
CAACTAATAATATTAATTTG+TGG 0.463413 7.1:-56240448 MS.gene96406:CDS
AGAGTCGAAATGCCATCAAT+AGG 0.468438 7.1:+56240311 None:intergenic
ATAAAATTAGGGATCGGGTT+GGG 0.473520 7.1:+56240944 None:intergenic
GGATTCCATATGATGAGGTC+TGG 0.483549 7.1:+56240836 None:intergenic
ACTATTCTGATCACATAGTT+GGG 0.493088 7.1:-56240598 MS.gene96406:CDS
TCTAGAGCATGGATCATTCT+GGG 0.494151 7.1:-56240195 MS.gene96406:CDS
GGTTTAATAAAATTAGGGAT+CGG 0.497757 7.1:+56240938 None:intergenic
ACTCTGTATACACGATCACT+TGG 0.521247 7.1:+56240150 None:intergenic
ACGATCACTTGGGATCCAAA+TGG 0.522188 7.1:+56240161 None:intergenic
AATAAAATTAGGGATCGGGT+TGG 0.528236 7.1:+56240943 None:intergenic
ATTAAGAGATGATTACTTGG+TGG 0.531811 7.1:-56240729 MS.gene96406:CDS
TTACATTTGATTTAATGGAT+CGG 0.535061 7.1:-56240511 MS.gene96406:CDS
GGCGACATTGTTGGAAGAGA+CGG 0.539406 7.1:-56240257 MS.gene96406:CDS
TCAATTAAGAGATGATTACT+TGG 0.542251 7.1:-56240732 MS.gene96406:CDS
ACTTGGGATCCAAATGGAAG+TGG 0.547144 7.1:+56240167 None:intergenic
AATACTTGGAAAGAACTTGA+GGG 0.569131 7.1:-56240644 MS.gene96406:CDS
CAATCTAAAGATAGTGTAGT+CGG 0.577331 7.1:+56241004 None:intergenic
TAATACTTGGAAAGAACTTG+AGG 0.578194 7.1:-56240645 MS.gene96406:CDS
ACAAATTCAAGTTCGTGTAG+AGG 0.585550 7.1:-56240881 MS.gene96406:CDS
TTTGAATCATTAGGAGACAA+AGG 0.589171 7.1:+56240788 None:intergenic
TCCACAACATTAAAATCACA+TGG 0.589633 7.1:+56240914 None:intergenic
CACAACATTAAAATCACATG+GGG 0.591367 7.1:+56240916 None:intergenic
TGATAGTTCAAATTCTGCTG+AGG 0.593840 7.1:-56241171 MS.gene96406:CDS
AGAGGACAACTTCTAGAGCA+TGG 0.593949 7.1:-56240206 MS.gene96406:CDS
CCACAACATTAAAATCACAT+GGG 0.594686 7.1:+56240915 None:intergenic
TAATGAAAGAGTTGAAATAT+GGG 0.595340 7.1:-56240384 MS.gene96406:CDS
AAATGCGAATTTGCAAAGTG+AGG 0.616345 7.1:+56241079 None:intergenic
CTCTGTATACACGATCACTT+GGG 0.625243 7.1:+56240151 None:intergenic
CAGAATAGTGAAGAACATAT+GGG 0.630586 7.1:+56240612 None:intergenic
ATTTGAACTATCAATTCATG+AGG 0.639280 7.1:+56241181 None:intergenic
GAGCATGGATCATTCTGGGA+CGG 0.652794 7.1:-56240191 MS.gene96406:CDS
TTGATGGATTCCATATGATG+AGG 0.658732 7.1:+56240831 None:intergenic
GACATTGTTGGAAGAGACGG+CGG 0.702786 7.1:-56240254 MS.gene96406:CDS
TTACTGAAGTATAATGACAG+AGG 0.710690 7.1:-56240224 MS.gene96406:CDS
AATTCATGAGGTAGATACCG+CGG 0.711119 7.1:+56241193 None:intergenic
TTAGAGATAAGAGAAAACCA+AGG 0.720239 7.1:+56241106 None:intergenic
ACAACATTAAAATCACATGG+GGG 0.756417 7.1:+56240917 None:intergenic
AGAAGAAGACGAATCTACCG+CGG 0.774632 7.1:-56241210 MS.gene96406:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAATGTAATTATAAT+TGG + chr7.1:56240850-56240869 None:intergenic 10.0%
!! AATTAATATTATTAGTTGAA+TGG + chr7.1:56240918-56240937 None:intergenic 10.0%
!!! AACTAATAATATTAATTTGT+GGG - chr7.1:56240921-56240940 MS.gene96406:CDS 10.0%
!!! TATAATTACATTTGATTTAA+TGG - chr7.1:56240852-56240871 MS.gene96406:CDS 10.0%
!! TTAACATCCAAAAAATTAAT+GGG - chr7.1:56240667-56240686 MS.gene96406:CDS 15.0%
!! TTTAACATCCAAAAAATTAA+TGG - chr7.1:56240666-56240685 MS.gene96406:CDS 15.0%
!!! CAACTAATAATATTAATTTG+TGG - chr7.1:56240920-56240939 MS.gene96406:CDS 15.0%
!! AATAGTTTCAGTTATCTTTA+TGG - chr7.1:56240601-56240620 MS.gene96406:CDS 20.0%
!! TAATGAAAGAGTTGAAATAT+GGG - chr7.1:56240984-56241003 MS.gene96406:CDS 20.0%
!!! AATATTAATTTGTGGGTATT+TGG - chr7.1:56240928-56240947 MS.gene96406:CDS 20.0%
!!! TTACATTTGATTTAATGGAT+CGG - chr7.1:56240857-56240876 MS.gene96406:CDS 20.0%
! AATACAAAGTTCATTCATCT+TGG - chr7.1:56241016-56241035 MS.gene96406:CDS 25.0%
! ATGGGGGTTTAATAAAATTA+GGG + chr7.1:56240438-56240457 None:intergenic 25.0%
! ATTTGAACTATCAATTCATG+AGG + chr7.1:56240190-56240209 None:intergenic 25.0%
! CTAATGAAAGAGTTGAAATA+TGG - chr7.1:56240983-56241002 MS.gene96406:CDS 25.0%
! CTGAAACTATTTGAATCATT+AGG + chr7.1:56240592-56240611 None:intergenic 25.0%
! GGTTTAATAAAATTAGGGAT+CGG + chr7.1:56240433-56240452 None:intergenic 25.0%
! GTTTAATAAAATTAGGGATC+GGG + chr7.1:56240432-56240451 None:intergenic 25.0%
! TCAATTAAGAGATGATTACT+TGG - chr7.1:56240636-56240655 MS.gene96406:CDS 25.0%
! TCAGTTATCTTTATGGATTT+GGG - chr7.1:56240608-56240627 MS.gene96406:CDS 25.0%
! TGTCATTATACTTCAGTAAT+TGG + chr7.1:56241143-56241162 None:intergenic 25.0%
! TTCAGTTATCTTTATGGATT+TGG - chr7.1:56240607-56240626 MS.gene96406:CDS 25.0%
! TTTCATTGAGAGATAATACT+TGG - chr7.1:56240710-56240729 MS.gene96406:CDS 25.0%
!! CTTTTTCCAATTTTACAAGT+GGG + chr7.1:56240130-56240149 None:intergenic 25.0%
!!! CATTTTTTGTAGACCATATT+GGG + chr7.1:56241092-56241111 None:intergenic 25.0%
AATACTTGGAAAGAACTTGA+GGG - chr7.1:56240724-56240743 MS.gene96406:CDS 30.0%
ACAACATTAAAATCACATGG+GGG + chr7.1:56240454-56240473 None:intergenic 30.0%
ACTATTCTGATCACATAGTT+GGG - chr7.1:56240770-56240789 MS.gene96406:CDS 30.0%
ATCTTTAGATTGTGAAGCAT+TGG - chr7.1:56240375-56240394 MS.gene96406:CDS 30.0%
ATTAAGAGATGATTACTTGG+TGG - chr7.1:56240639-56240658 MS.gene96406:CDS 30.0%
CAATCTAAAGATAGTGTAGT+CGG + chr7.1:56240367-56240386 None:intergenic 30.0%
CACAACATTAAAATCACATG+GGG + chr7.1:56240455-56240474 None:intergenic 30.0%
CAGAATAGTGAAGAACATAT+GGG + chr7.1:56240759-56240778 None:intergenic 30.0%
CATGGGGGTTTAATAAAATT+AGG + chr7.1:56240439-56240458 None:intergenic 30.0%
CCAATATGGTCTACAAAAAA+TGG - chr7.1:56241090-56241109 MS.gene96406:CDS 30.0%
CCACAACATTAAAATCACAT+GGG + chr7.1:56240456-56240475 None:intergenic 30.0%
CCACTTGTAAAATTGGAAAA+AGG - chr7.1:56240128-56240147 MS.gene96406:CDS 30.0%
TAATACTTGGAAAGAACTTG+AGG - chr7.1:56240723-56240742 MS.gene96406:CDS 30.0%
TCAGAATAGTGAAGAACATA+TGG + chr7.1:56240760-56240779 None:intergenic 30.0%
TCCACAACATTAAAATCACA+TGG + chr7.1:56240457-56240476 None:intergenic 30.0%
TCTTTAATGGAGCTATTCAT+TGG - chr7.1:56240797-56240816 MS.gene96406:CDS 30.0%
TGGAGAATTTCTCAGTTTAT+GGG - chr7.1:56240948-56240967 MS.gene96406:CDS 30.0%
TTACTGAAGTATAATGACAG+AGG - chr7.1:56241144-56241163 MS.gene96406:CDS 30.0%
TTAGAGATAAGAGAAAACCA+AGG + chr7.1:56240265-56240284 None:intergenic 30.0%
TTGGAGAATTTCTCAGTTTA+TGG - chr7.1:56240947-56240966 MS.gene96406:CDS 30.0%
TTTGAATCATTAGGAGACAA+AGG + chr7.1:56240583-56240602 None:intergenic 30.0%
! CCTTTTTCCAATTTTACAAG+TGG + chr7.1:56240131-56240150 None:intergenic 30.0%
! TTTTTCGTCGTGATATAAAG+AGG - chr7.1:56240824-56240843 MS.gene96406:CDS 30.0%
!!! CCATTTTTTGTAGACCATAT+TGG + chr7.1:56241093-56241112 None:intergenic 30.0%
AAATGCGAATTTGCAAAGTG+AGG + chr7.1:56240292-56240311 None:intergenic 35.0%
AATAAAATTAGGGATCGGGT+TGG + chr7.1:56240428-56240447 None:intergenic 35.0%
ACAAAAAATGGCGACATTGT+TGG - chr7.1:56241102-56241121 MS.gene96406:CDS 35.0%
ACTCTTGTTCTTCCTATTGA+TGG - chr7.1:56241045-56241064 MS.gene96406:CDS 35.0%
ATAAAATTAGGGATCGGGTT+GGG + chr7.1:56240427-56240446 None:intergenic 35.0%
ATAGTTGGGTCACTCTTTAA+TGG - chr7.1:56240784-56240803 MS.gene96406:CDS 35.0%
ATCATATGGAATCCATCAAC+TGG - chr7.1:56240541-56240560 MS.gene96406:CDS 35.0%
CACTATTCTGATCACATAGT+TGG - chr7.1:56240769-56240788 MS.gene96406:CDS 35.0%
GTTGAATGGTAAAAACCATC+AGG + chr7.1:56240904-56240923 None:intergenic 35.0%
TAATGGAGCTATTCATTGGT+TGG - chr7.1:56240801-56240820 MS.gene96406:CDS 35.0%
TCAAATGTGTTTGTAAGCCT+TGG - chr7.1:56240245-56240264 MS.gene96406:CDS 35.0%
TGATAGTTCAAATTCTGCTG+AGG - chr7.1:56240197-56240216 MS.gene96406:CDS 35.0%
TGGTAAAAACCATCAGGAAA+AGG + chr7.1:56240898-56240917 None:intergenic 35.0%
TGTAGACCATATTGGGTAAA+AGG + chr7.1:56241085-56241104 None:intergenic 35.0%
TGTTTGTAAACTCCAGTTGA+TGG + chr7.1:56240556-56240575 None:intergenic 35.0%
! ACAAATTCAAGTTCGTGTAG+AGG - chr7.1:56240487-56240506 MS.gene96406:CDS 35.0%
! ATTTTCCAGACCTCATCATA+TGG - chr7.1:56240527-56240546 MS.gene96406:CDS 35.0%
!! CCCATGTGATTTTAATGTTG+TGG - chr7.1:56240453-56240472 MS.gene96406:CDS 35.0%
!! TTGATGGATTCCATATGATG+AGG + chr7.1:56240540-56240559 None:intergenic 35.0%
!!! AACTCTAAGAGAGTGTTTTG+CGG + chr7.1:56240323-56240342 None:intergenic 35.0%
!!! CGAACAGCCCATTAATTTTT+TGG + chr7.1:56240677-56240696 None:intergenic 35.0%
AATTCATGAGGTAGATACCG+CGG + chr7.1:56240178-56240197 None:intergenic 40.0%
ACGACACCCACTTGTAAAAT+TGG - chr7.1:56240121-56240140 MS.gene96406:CDS 40.0%
ACTCTGTATACACGATCACT+TGG + chr7.1:56241221-56241240 None:intergenic 40.0%
AGAGTCGAAATGCCATCAAT+AGG + chr7.1:56241060-56241079 None:intergenic 40.0%
CTCTGTATACACGATCACTT+GGG + chr7.1:56241220-56241239 None:intergenic 40.0%
TTCAAATTCTGCTGAGGTTG+CGG - chr7.1:56240203-56240222 MS.gene96406:CDS 40.0%
! CTCTCTCCTTTTACCCAATA+TGG - chr7.1:56241076-56241095 MS.gene96406:CDS 40.0%
! TCTAGAGCATGGATCATTCT+GGG - chr7.1:56241173-56241192 MS.gene96406:CDS 40.0%
! TTAGAGATGCCTTTTCCTGA+TGG - chr7.1:56240886-56240905 MS.gene96406:CDS 40.0%
!! TTCTAGAGCATGGATCATTC+TGG - chr7.1:56241172-56241191 MS.gene96406:CDS 40.0%
ACGATCACTTGGGATCCAAA+TGG + chr7.1:56241210-56241229 None:intergenic 45.0%
ACTTGGGATCCAAATGGAAG+TGG + chr7.1:56241204-56241223 None:intergenic 45.0%
AGAAGAAGACGAATCTACCG+CGG - chr7.1:56240158-56240177 MS.gene96406:CDS 45.0%
GAGTCTTTGCTTTCACTCAC+TGG - chr7.1:56241237-56241256 MS.gene96406:CDS 45.0%
GGATTCCATATGATGAGGTC+TGG + chr7.1:56240535-56240554 None:intergenic 45.0%
TCAAATTCTGCTGAGGTTGC+GGG - chr7.1:56240204-56240223 MS.gene96406:CDS 45.0%
!! AGAGGACAACTTCTAGAGCA+TGG - chr7.1:56241162-56241181 MS.gene96406:CDS 45.0%
!! TAATGGGCTGTTCGCATTTG+AGG - chr7.1:56240683-56240702 MS.gene96406:CDS 45.0%
GACATTGTTGGAAGAGACGG+CGG - chr7.1:56241114-56241133 MS.gene96406:CDS 50.0%
GGCGACATTGTTGGAAGAGA+CGG - chr7.1:56241111-56241130 MS.gene96406:CDS 50.0%
! GAGCATGGATCATTCTGGGA+CGG - chr7.1:56241177-56241196 MS.gene96406:CDS 50.0%
TGGGACGGTCCACTTCCATT+TGG - chr7.1:56241192-56241211 MS.gene96406:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 56240112 56241278 56240112 ID=MS.gene96406
chr7.1 mRNA 56240112 56241278 56240112 ID=MS.gene96406.t1;Parent=MS.gene96406
chr7.1 exon 56240112 56241278 56240112 ID=MS.gene96406.t1.exon1;Parent=MS.gene96406.t1
chr7.1 CDS 56240112 56241278 56240112 ID=cds.MS.gene96406.t1;Parent=MS.gene96406.t1
Gene Sequence

>MS.gene96406

ATGGAGGAGACGACACCCACTTGTAAAATTGGAAAAAGGCTCATGAAGAAGAAGACGAATCTACCGCGGTATCTACCTCATGAATTGATAGTTCAAATTCTGCTGAGGTTGCGGGTGAAGTCTCTTATTCGTTTCAAATGTGTTTGTAAGCCTTGGTTTTCTCTTATCTCTAATGATCCTCACTTTGCAAATTCGCATTTTGAAATTACCGCAAAACACTCTCTTAGAGTTTTGTTCATGTCAAATCATGTTCCGACTACACTATCTTTAGATTGTGAAGCATTGGATTATGATAATGCTATTTCTGAAATACCCAACCCGATCCCTAATTTTATTAAACCCCCATGTGATTTTAATGTTGTGGATTATCTTGCTACAAATTCAAGTTCGTGTAGAGGATTTATATTTCTGCACAATTTTCCAGACCTCATCATATGGAATCCATCAACTGGAGTTTACAAACAAATACCTTTGTCTCCTAATGATTCAAATAGTTTCAGTTATCTTTATGGATTTGGGTATGATCAATTAAGAGATGATTACTTGGTGGTTTCTTTAACATCCAAAAAATTAATGGGCTGTTCGCATTTGAGGTTTTTTTCATTGAGAGATAATACTTGGAAAGAACTTGAGGGTGCTCACGTCCCATATGTTCTTCACTATTCTGATCACATAGTTGGGTCACTCTTTAATGGAGCTATTCATTGGTTGGTTTTTCGTCGTGATATAAAGAGGCCAATTATAATTACATTTGATTTAATGGATCGGAAACTTTTAGAGATGCCTTTTCCTGATGGTTTTTACCATTCAACTAATAATATTAATTTGTGGGTATTTGGAGAATTTCTCAGTTTATGGGCTAACGATTATGCTAATGAAAGAGTTGAAATATGGGTGATGAACGAATACAAAGTTCATTCATCTTGGACTAAAACTCTTGTTCTTCCTATTGATGGCATTTCGACTCTCTCCTTTTACCCAATATGGTCTACAAAAAATGGCGACATTGTTGGAAGAGACGGCGGTATCCAATTACTGAAGTATAATGACAGAGGACAACTTCTAGAGCATGGATCATTCTGGGACGGTCCACTTCCATTTGGATCCCAAGTGATCGTGTATACAGAGTCTTTGCTTTCACTCACTGGTGACATTGTGCAAGCCTAA
Protein sequence

>MS.gene96406.t1

MEETTPTCKIGKRLMKKKTNLPRYLPHELIVQILLRLRVKSLIRFKCVCKPWFSLISNDPHFANSHFEITAKHSLRVLFMSNHVPTTLSLDCEALDYDNAISEIPNPIPNFIKPPCDFNVVDYLATNSSSCRGFIFLHNFPDLIIWNPSTGVYKQIPLSPNDSNSFSYLYGFGYDQLRDDYLVVSLTSKKLMGCSHLRFFSLRDNTWKELEGAHVPYVLHYSDHIVGSLFNGAIHWLVFRRDIKRPIIITFDLMDRKLLEMPFPDGFYHSTNNINLWVFGEFLSLWANDYANERVEIWVMNEYKVHSSWTKTLVLPIDGISTLSFYPIWSTKNGDIVGRDGGIQLLKYNDRGQLLEHGSFWDGPLPFGSQVIVYTESLLSLTGDIVQA