AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009891


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009891.t1 MTR_5g070088 82.124 386 69 0 44 429 1 386 0.0 622
MS.gene009891.t1 MTR_5g070080 68.814 388 116 4 43 429 3 386 3.83e-176 497
MS.gene009891.t1 MTR_5g070130 63.520 392 116 3 45 429 6 377 4.84e-169 479
MS.gene009891.t1 MTR_3g103020 53.383 399 157 6 27 423 2 373 7.73e-130 379
MS.gene009891.t1 MTR_5g097210 51.316 380 151 10 49 423 8 358 2.92e-113 337
MS.gene009891.t1 MTR_3g034160 51.010 396 157 11 45 428 4 374 2.67e-110 330
MS.gene009891.t1 MTR_3g034180 47.343 414 178 12 28 429 104 489 1.18e-107 327
MS.gene009891.t1 MTR_4g023080 48.187 386 157 8 45 425 4 351 1.79e-106 319
MS.gene009891.t1 MTR_1g055135 50.378 397 153 12 41 423 4 370 2.81e-106 319
MS.gene009891.t1 MTR_4g117750 51.938 387 138 10 49 422 2 353 4.13e-103 315
MS.gene009891.t1 MTR_4g117750 44.615 130 63 2 302 423 350 478 1.38e-21 97.1
MS.gene009891.t1 MTR_4g109270 48.354 395 157 11 44 425 1 361 5.28e-103 310
MS.gene009891.t1 MTR_3g034130 48.312 385 162 10 44 414 1 362 1.04e-102 310
MS.gene009891.t1 MTR_4g023090 45.343 408 178 10 40 429 6 386 6.15e-102 308
MS.gene009891.t1 MTR_4g117850 48.947 380 159 10 49 421 22 373 6.96e-100 303
MS.gene009891.t1 MTR_4g021785 46.410 390 163 11 44 425 1 352 1.48e-99 301
MS.gene009891.t1 MTR_4g094365 46.859 382 169 9 47 422 5 358 3.87e-97 295
MS.gene009891.t1 MTR_4g117770 48.312 385 168 8 49 429 10 367 4.80e-96 293
MS.gene009891.t1 MTR_4g117810 48.312 385 168 8 49 429 10 367 4.80e-96 293
MS.gene009891.t1 MTR_4g109280 48.936 376 159 9 49 421 7 352 5.69e-96 292
MS.gene009891.t1 MTR_4g117780 48.969 388 159 13 50 429 11 367 7.64e-96 292
MS.gene009891.t1 MTR_6g060650 48.964 386 160 10 49 422 7 367 8.28e-96 292
MS.gene009891.t1 MTR_4g116330 44.888 401 190 10 30 425 3 377 6.52e-93 285
MS.gene009891.t1 MTR_4g023070 43.878 392 177 9 50 425 3 367 7.10e-92 282
MS.gene009891.t1 MTR_4g117720 45.128 390 144 10 49 429 50 378 1.80e-91 281
MS.gene009891.t1 MTR_4g023120 43.878 392 177 10 50 425 3 367 2.80e-90 278
MS.gene009891.t1 MTR_8g433040 44.643 392 172 12 44 429 12 364 7.56e-90 277
MS.gene009891.t1 MTR_8g032380 44.643 392 172 12 44 429 12 364 7.56e-90 277
MS.gene009891.t1 MTR_4g023380 43.645 417 165 10 40 429 6 379 2.93e-89 276
MS.gene009891.t1 MTR_4g122850 45.576 373 168 11 61 423 12 359 4.90e-89 275
MS.gene009891.t1 MTR_8g032390 44.730 389 160 10 42 424 32 371 1.02e-87 271
MS.gene009891.t1 MTR_4g023150 45.220 387 172 11 45 425 5 357 1.02e-87 271
MS.gene009891.t1 MTR_4g023190 45.220 387 171 10 45 425 5 356 3.33e-87 270
MS.gene009891.t1 MTR_4g023440 45.455 396 143 14 38 429 6 332 4.96e-87 268
MS.gene009891.t1 MTR_4g118380 47.945 365 164 9 49 401 7 357 2.82e-86 267
MS.gene009891.t1 MTR_4g023200 44.262 366 164 10 64 423 24 355 2.26e-84 263
MS.gene009891.t1 MTR_4g116330 41.147 401 166 10 30 425 3 338 3.07e-77 243
MS.gene009891.t1 MTR_8g013010 49.470 283 113 7 49 327 53 309 3.99e-77 242
MS.gene009891.t1 MTR_1g055165 41.026 390 148 12 42 425 2 315 8.81e-77 241
MS.gene009891.t1 MTR_1g055195 48.410 283 120 8 154 428 213 477 7.27e-74 239
MS.gene009891.t1 MTR_4g121580 42.025 395 161 16 41 421 2 342 4.51e-72 232
MS.gene009891.t1 MTR_4g023130 47.761 268 118 6 162 425 61 310 6.18e-70 224
MS.gene009891.t1 MTR_4g023130 75.862 58 14 0 45 102 4 61 7.74e-21 92.8
MS.gene009891.t1 MTR_7g079370 40.166 361 177 9 79 424 16 352 4.41e-66 215
MS.gene009891.t1 MTR_2g048580 37.436 390 180 15 45 424 3 338 1.63e-62 206
MS.gene009891.t1 MTR_4g117870 39.506 324 137 8 106 429 3 267 2.85e-62 202
MS.gene009891.t1 MTR_4g118370 47.791 249 98 7 180 423 34 255 1.65e-60 197
MS.gene009891.t1 MTR_7g079400 44.406 286 136 9 151 424 59 333 1.55e-59 197
MS.gene009891.t1 MTR_4g118400 39.863 291 136 8 139 422 36 294 2.23e-55 185
MS.gene009891.t1 MTR_8g102520 36.340 388 167 15 45 424 3 318 1.71e-53 181
MS.gene009891.t1 MTR_4g116320 49.767 215 100 5 211 422 43 252 1.08e-52 177
MS.gene009891.t1 MTR_8g433030 48.869 221 103 7 207 424 125 338 2.26e-50 174
MS.gene009891.t1 MTR_8g433030 57.143 84 35 1 42 125 32 114 8.30e-20 90.5
MS.gene009891.t1 MTR_1g055250 50.000 202 90 6 206 403 49 243 2.82e-50 173
MS.gene009891.t1 MTR_4g116340 39.394 264 111 7 40 292 22 247 3.49e-46 160
MS.gene009891.t1 MTR_1g055175 47.396 192 92 6 236 422 8 195 3.46e-45 155
MS.gene009891.t1 MTR_6g463430 43.415 205 109 2 222 425 1 199 5.61e-45 155
MS.gene009891.t1 MTR_8g040935 43.204 206 110 4 222 423 1 203 3.39e-40 143
MS.gene009891.t1 MTR_4g117530 38.735 253 107 6 176 423 39 248 2.18e-39 142
MS.gene009891.t1 MTR_7g117720 42.466 219 77 7 45 255 5 182 1.52e-38 140
MS.gene009891.t1 MTR_7g117720 56.322 87 34 2 341 423 186 272 1.19e-20 91.7
MS.gene009891.t1 MTR_4g117430 49.324 148 53 4 167 308 3 134 1.14e-37 134
MS.gene009891.t1 MTR_7g079420 38.095 273 118 11 166 424 905 1140 1.53e-37 145
MS.gene009891.t1 MTR_5g069120 40.609 197 86 6 60 245 1 177 1.15e-32 122
MS.gene009891.t1 MTR_4g114700 37.121 264 101 7 167 419 9 218 8.64e-32 121
MS.gene009891.t1 MTR_1g097490 28.818 406 233 14 26 420 30 390 4.72e-30 120
MS.gene009891.t1 MTR_4g109290 42.077 183 54 5 44 222 1 135 1.74e-29 114
MS.gene009891.t1 MTR_2g021150 31.269 323 181 13 49 359 13 306 2.32e-29 118
MS.gene009891.t1 MTR_5g011200 30.631 333 187 16 37 355 1 303 1.30e-28 116
MS.gene009891.t1 MTR_5g057790 29.560 318 185 10 50 359 46 332 4.11e-28 115
MS.gene009891.t1 MTR_5g057710 29.560 318 185 11 50 359 46 332 4.98e-28 114
MS.gene009891.t1 MTR_4g107820 27.559 381 235 14 50 420 36 385 3.29e-27 112
MS.gene009891.t1 MTR_4g107780 27.559 381 235 14 50 420 36 385 3.29e-27 112
MS.gene009891.t1 MTR_4g107780 27.559 381 235 14 50 420 36 385 3.32e-27 112
MS.gene009891.t1 MTR_4g107820 27.559 381 235 14 50 420 36 385 3.35e-27 112
MS.gene009891.t1 MTR_3g014570 29.573 328 186 13 50 365 29 323 5.56e-27 111
MS.gene009891.t1 MTR_7g079450 44.928 138 68 4 288 424 3 133 9.77e-27 104
MS.gene009891.t1 MTR_8g467140 29.846 325 184 10 49 362 31 322 1.02e-26 110
MS.gene009891.t1 MTR_3g030250 27.439 328 185 13 39 357 27 310 3.54e-26 109
MS.gene009891.t1 MTR_6g053260 30.968 310 182 11 50 353 337 620 3.70e-26 111
MS.gene009891.t1 MTR_6g053240 29.206 315 186 11 50 353 28 316 3.92e-26 109
MS.gene009891.t1 MTR_3g014540 30.029 343 182 16 50 375 29 330 5.48e-26 108
MS.gene009891.t1 MTR_5g022420 26.954 371 214 14 40 394 17 346 7.16e-26 108
MS.gene009891.t1 MTR_3g007360 28.090 356 202 15 53 390 55 374 8.14e-26 108
MS.gene009891.t1 MTR_2g021190 27.606 355 216 15 50 393 21 345 9.69e-26 108
MS.gene009891.t1 MTR_1g054725 29.787 329 184 14 48 361 18 314 1.10e-25 107
MS.gene009891.t1 MTR_1g094210 27.676 383 224 13 23 396 37 375 1.35e-25 108
MS.gene009891.t1 MTR_3g013770 28.614 332 205 11 50 375 33 338 2.73e-25 107
MS.gene009891.t1 MTR_3g007410 28.090 356 202 15 53 390 55 374 2.89e-25 107
MS.gene009891.t1 MTR_1g094210 27.518 407 241 14 23 420 37 398 3.10e-25 107
MS.gene009891.t1 MTR_4g061340 29.226 349 185 16 35 359 7 317 3.44e-25 106
MS.gene009891.t1 MTR_2g028130 26.613 372 223 13 50 393 5 354 3.54e-25 107
MS.gene009891.t1 MTR_4g118360 46.774 124 59 5 302 422 1 120 5.26e-25 99.8
MS.gene009891.t1 MTR_2g055970 28.829 333 177 13 49 362 210 501 6.43e-25 107
MS.gene009891.t1 MTR_7g407070 31.563 339 180 16 50 363 32 343 9.50e-25 105
MS.gene009891.t1 MTR_5g023000 54.737 95 41 1 329 423 2 94 1.11e-24 97.8
MS.gene009891.t1 MTR_4g133170 28.736 348 192 13 50 379 4 313 1.62e-24 104
MS.gene009891.t1 MTR_3g036290 30.094 319 167 14 50 358 22 294 1.69e-24 104
MS.gene009891.t1 MTR_7g056390 27.842 431 215 18 53 421 21 417 3.00e-24 104
MS.gene009891.t1 MTR_2g028140 29.118 340 195 13 50 360 5 327 3.74e-24 103
MS.gene009891.t1 MTR_3g009310 27.848 316 191 10 50 358 42 327 4.50e-24 103
MS.gene009891.t1 MTR_1g097330 27.222 360 208 11 45 389 11 331 6.64e-24 103
MS.gene009891.t1 MTR_7g070830 28.108 370 215 12 33 366 4 358 8.77e-24 103
MS.gene009891.t1 MTR_4g108820 28.319 339 171 11 32 362 19 293 1.03e-23 101
MS.gene009891.t1 MTR_8g101580 27.525 396 216 15 50 420 45 394 1.07e-23 102
MS.gene009891.t1 MTR_4g023430 48.361 122 59 3 16 135 8 127 1.18e-23 99.0
MS.gene009891.t1 MTR_4g023430 53.659 82 34 2 351 429 142 222 1.69e-18 84.3
MS.gene009891.t1 MTR_1g097560 28.460 383 218 19 25 396 15 352 1.22e-23 102
MS.gene009891.t1 MTR_8g098830 39.634 164 90 5 237 396 35 193 1.53e-23 98.6
MS.gene009891.t1 MTR_3g083640 26.478 389 227 13 50 420 55 402 1.64e-23 102
MS.gene009891.t1 MTR_2g028160 29.096 354 210 14 50 379 5 341 1.86e-23 102
MS.gene009891.t1 MTR_2g046900 28.024 339 194 14 41 362 19 324 2.16e-23 101
MS.gene009891.t1 MTR_8g073550 34.597 211 106 9 49 251 29 215 2.39e-23 98.2
MS.gene009891.t1 MTR_2g043400 30.601 366 183 17 34 362 5 336 2.41e-23 101
MS.gene009891.t1 MTR_2g046920 28.319 339 185 15 41 362 15 312 2.73e-23 100
MS.gene009891.t1 MTR_1g114700 28.615 325 198 12 50 367 29 326 3.37e-23 100
MS.gene009891.t1 MTR_7g061060 28.571 350 188 11 45 366 8 323 3.47e-23 100
MS.gene009891.t1 MTR_7g056290 27.815 453 230 19 30 420 3 420 4.46e-23 100
MS.gene009891.t1 MTR_6g021880 27.439 328 205 10 61 377 31 336 4.74e-23 100
MS.gene009891.t1 MTR_7g070880 27.226 393 219 15 33 379 4 375 6.65e-23 100
MS.gene009891.t1 MTR_1g088120 28.024 339 194 10 53 362 13 330 1.06e-22 99.8
MS.gene009891.t1 MTR_3g006500 29.358 327 169 14 50 357 17 300 1.10e-22 99.4
MS.gene009891.t1 MTR_7g056760 25.000 412 258 10 40 420 13 404 1.23e-22 99.8
MS.gene009891.t1 MTR_3g030330 27.795 331 188 14 50 368 20 311 1.34e-22 99.0
MS.gene009891.t1 MTR_4g122860 35.135 185 89 4 242 422 157 314 1.35e-22 98.6
MS.gene009891.t1 MTR_4g122860 51.250 80 38 1 46 125 66 144 2.90e-13 70.9
MS.gene009891.t1 MTR_5g057690 28.526 312 186 10 50 359 46 322 1.49e-22 99.0
MS.gene009891.t1 MTR_2g047832 27.838 370 200 16 23 362 5 337 1.52e-22 99.4
MS.gene009891.t1 MTR_2g426090 27.717 368 200 13 44 379 1 334 1.66e-22 99.4
MS.gene009891.t1 MTR_7g060940 30.423 378 179 14 18 362 2 328 1.98e-22 99.0
MS.gene009891.t1 MTR_4g055060 28.571 322 188 14 50 358 30 322 2.73e-22 98.2
MS.gene009891.t1 MTR_2g029990 27.297 381 236 16 51 420 52 402 2.85e-22 98.6
MS.gene009891.t1 MTR_7g007300 27.778 324 184 12 47 361 100 382 2.94e-22 99.0
MS.gene009891.t1 MTR_0242s0060 26.149 348 203 11 46 362 5 329 3.06e-22 98.6
MS.gene009891.t1 MTR_0242s0040 26.149 348 203 11 46 362 5 329 3.06e-22 98.6
MS.gene009891.t1 MTR_2g021155 28.834 326 174 12 50 357 36 321 3.76e-22 99.8
MS.gene009891.t1 MTR_2g021155 25.862 232 149 9 180 397 711 933 2.17e-12 69.7
MS.gene009891.t1 MTR_6g007135 27.273 319 195 10 53 359 29 322 4.93e-22 97.4
MS.gene009891.t1 MTR_5g057020 28.487 337 183 14 50 380 46 330 5.92e-22 96.7
MS.gene009891.t1 MTR_3g083010 25.310 403 248 11 50 424 6 383 6.47e-22 97.4
MS.gene009891.t1 MTR_4g013180 29.619 341 185 13 49 362 10 322 6.60e-22 98.2
MS.gene009891.t1 MTR_3g010390 27.523 327 196 11 50 358 33 336 6.77e-22 97.4
MS.gene009891.t1 MTR_2g046830 27.907 344 196 15 31 362 10 313 7.58e-22 97.1
MS.gene009891.t1 MTR_2g031640 27.778 378 209 14 50 404 6 342 9.92e-22 96.7
MS.gene009891.t1 MTR_3g013740 28.358 335 203 13 44 364 38 349 1.13e-21 96.7
MS.gene009891.t1 MTR_1g068875 26.239 343 208 9 50 379 4 314 1.24e-21 96.3
MS.gene009891.t1 MTR_1g068835 29.060 351 193 14 48 379 2 315 1.87e-21 95.9
MS.gene009891.t1 MTR_7g070440 27.647 340 195 11 44 362 1 310 1.94e-21 95.5
MS.gene009891.t1 MTR_3g072470 30.028 353 166 15 53 362 22 336 2.08e-21 96.3
MS.gene009891.t1 MTR_2g043410 30.029 343 175 13 53 362 25 335 2.61e-21 95.9
MS.gene009891.t1 MTR_3g007430 28.395 324 172 14 53 357 46 328 2.85e-21 95.5
MS.gene009891.t1 MTR_3g007330 28.875 329 180 14 50 365 48 335 3.08e-21 95.5
MS.gene009891.t1 MTR_3g010590 28.165 316 167 12 50 353 39 306 3.58e-21 95.1
MS.gene009891.t1 MTR_3g006670 26.748 329 199 13 50 367 49 346 3.61e-21 95.5
MS.gene009891.t1 MTR_7g062060 26.286 350 207 12 45 362 7 337 3.78e-21 95.1
MS.gene009891.t1 MTR_6g048120 29.114 316 187 10 50 353 36 326 3.83e-21 95.1
MS.gene009891.t1 MTR_7g078860 27.457 346 198 10 45 362 4 324 5.97e-21 94.4
MS.gene009891.t1 MTR_7g066850 26.923 338 197 12 50 366 23 331 6.13e-21 95.1
MS.gene009891.t1 MTR_7g056503 26.914 405 236 19 49 420 20 397 6.30e-21 94.4
MS.gene009891.t1 MTR_0667s0010 26.807 332 188 13 50 357 6 306 7.00e-21 94.4
MS.gene009891.t1 MTR_3g023930 28.197 305 174 11 50 353 34 294 8.60e-21 93.6
MS.gene009891.t1 MTR_4g070550 26.531 343 204 12 50 365 5 326 1.03e-20 94.0
MS.gene009891.t1 MTR_7g061090 26.879 346 197 12 48 362 20 340 1.11e-20 94.0
MS.gene009891.t1 MTR_2g021252 24.528 424 251 15 8 416 1 370 1.12e-20 93.6
MS.gene009891.t1 MTR_6g065980 27.554 323 179 14 40 353 6 282 1.15e-20 93.2
MS.gene009891.t1 MTR_2g021210 28.527 319 183 14 50 361 84 364 1.21e-20 94.0
MS.gene009891.t1 MTR_2g047200 26.914 405 231 18 50 420 20 393 1.47e-20 93.2
MS.gene009891.t1 MTR_2g078900 27.439 328 188 14 37 353 21 309 1.56e-20 92.8
MS.gene009891.t1 MTR_4g013185 28.818 347 193 13 53 362 13 342 1.75e-20 93.6
MS.gene009891.t1 MTR_6g048140 31.132 318 172 14 50 353 39 323 1.90e-20 93.2
MS.gene009891.t1 MTR_2g426070 28.045 353 208 11 51 379 7 337 2.24e-20 92.8
MS.gene009891.t1 MTR_6g004660 28.086 324 196 13 50 359 16 316 2.58e-20 92.4
MS.gene009891.t1 MTR_5g057643 28.916 249 146 6 50 292 46 269 2.72e-20 90.5
MS.gene009891.t1 MTR_2g031720 26.216 370 214 14 50 395 6 340 2.79e-20 92.4
MS.gene009891.t1 MTR_4g031770 27.964 329 185 14 48 361 2 293 2.82e-20 92.0
MS.gene009891.t1 MTR_1g055070 29.642 307 171 14 45 329 44 327 2.82e-20 92.4
MS.gene009891.t1 MTR_7g013590 28.493 365 204 16 10 359 4 326 3.41e-20 92.4
MS.gene009891.t1 MTR_7g055987 28.313 332 177 14 53 362 23 315 3.63e-20 92.0
MS.gene009891.t1 MTR_3g010430 28.882 322 172 15 50 353 36 318 5.23e-20 92.0
MS.gene009891.t1 MTR_1g115160 25.806 310 192 9 49 355 21 295 5.73e-20 91.3
MS.gene009891.t1 MTR_3g024040 28.617 311 180 13 57 363 38 310 6.67e-20 91.3
MS.gene009891.t1 MTR_8g062660 25.408 429 219 20 38 420 7 380 1.10e-19 92.0
MS.gene009891.t1 MTR_2g024110 26.409 337 206 9 50 373 4 311 1.11e-19 90.5
MS.gene009891.t1 MTR_3g011060 28.213 319 200 14 50 359 28 326 1.25e-19 90.5
MS.gene009891.t1 MTR_3g058440 31.225 253 124 11 50 283 35 256 1.34e-19 89.4
MS.gene009891.t1 MTR_1g050542 25.455 385 235 13 50 420 58 404 1.41e-19 90.5
MS.gene009891.t1 MTR_7g067680 27.763 371 197 17 50 412 49 356 1.98e-19 90.1
MS.gene009891.t1 MTR_3g010520 28.339 307 172 12 50 353 25 286 2.30e-19 89.4
MS.gene009891.t1 MTR_6g034720 41.406 128 62 4 190 310 53 174 2.50e-19 86.7
MS.gene009891.t1 MTR_0464s0020 31.609 348 175 17 53 362 26 348 2.55e-19 90.1
MS.gene009891.t1 MTR_7g061050 24.679 389 228 11 45 401 8 363 3.05e-19 89.4
MS.gene009891.t1 MTR_0128s0020 27.336 428 228 20 38 421 6 394 3.37e-19 89.4
MS.gene009891.t1 MTR_3g036335 27.327 333 182 13 50 363 41 332 4.63e-19 89.0
MS.gene009891.t1 MTR_0044s0300 28.165 316 177 13 50 353 38 315 4.74e-19 89.0
MS.gene009891.t1 MTR_2g426020 25.432 405 236 18 50 429 6 369 6.22e-19 88.6
MS.gene009891.t1 MTR_3g024110 26.791 321 182 10 50 359 101 379 6.68e-19 89.0
MS.gene009891.t1 MTR_3g437520 29.096 354 179 15 53 362 26 351 7.22e-19 89.0
MS.gene009891.t1 MTR_2g026010 27.954 347 204 13 50 379 4 321 9.19e-19 88.2
MS.gene009891.t1 MTR_3g036430 27.036 307 164 11 50 353 20 269 9.40e-19 87.4
MS.gene009891.t1 MTR_7g056260 27.976 336 178 11 53 359 17 317 9.43e-19 87.0
MS.gene009891.t1 MTR_0707s0020 24.885 434 253 17 49 422 25 445 1.07e-18 88.2
MS.gene009891.t1 MTR_1g068860 26.284 331 198 10 50 365 4 303 1.25e-18 87.4
MS.gene009891.t1 MTR_5g043160 28.818 347 195 14 53 362 53 384 1.44e-18 87.8
MS.gene009891.t1 MTR_3g009240 28.616 318 184 12 50 359 36 318 1.59e-18 87.0
MS.gene009891.t1 MTR_3g030310 26.126 333 202 14 35 353 4 306 1.76e-18 87.0
MS.gene009891.t1 MTR_4g013175 28.212 358 181 13 53 362 13 342 1.84e-18 87.4
MS.gene009891.t1 MTR_7g061010 29.101 378 209 14 50 400 22 367 2.09e-18 87.0
MS.gene009891.t1 MTR_3g006570 26.546 388 236 16 50 420 21 376 2.20e-18 86.7
MS.gene009891.t1 MTR_1g055200 51.807 83 38 1 163 245 5 85 2.28e-18 80.5
MS.gene009891.t1 MTR_3g058480 30.769 273 145 13 50 306 39 283 2.41e-18 85.9
MS.gene009891.t1 MTR_1g442850 29.674 337 176 15 53 362 8 310 2.63e-18 86.7
MS.gene009891.t1 MTR_7g060960 28.940 349 168 15 50 377 32 321 2.80e-18 86.3
MS.gene009891.t1 MTR_7g078040 27.684 354 203 11 46 362 5 342 2.85e-18 87.0
MS.gene009891.t1 MTR_2g426060 27.778 360 201 16 50 379 6 336 3.02e-18 86.7
MS.gene009891.t1 MTR_4g028510 26.500 400 247 15 53 423 19 400 3.15e-18 87.0
MS.gene009891.t1 MTR_5g046260 24.601 313 176 11 50 361 4 257 3.30e-18 85.1
MS.gene009891.t1 MTR_6g086920 25.000 448 249 19 49 422 37 471 3.89e-18 86.7
MS.gene009891.t1 MTR_0054s0090 23.981 417 255 14 45 423 12 404 4.09e-18 86.3
MS.gene009891.t1 MTR_2g028110 26.829 328 186 10 50 357 4 297 5.11e-18 85.5
MS.gene009891.t1 MTR_5g009060 28.144 334 190 15 50 353 25 338 5.57e-18 85.9
MS.gene009891.t1 MTR_5g096710 26.554 354 200 12 50 379 23 340 5.85e-18 85.5
MS.gene009891.t1 MTR_8g066440 25.229 436 242 14 32 421 5 402 6.14e-18 85.5
MS.gene009891.t1 MTR_0267s0050 27.248 367 210 16 44 379 1 341 6.15e-18 85.5
MS.gene009891.t1 MTR_4g033495 26.036 338 198 12 50 362 27 337 7.50e-18 85.5
MS.gene009891.t1 MTR_5g027330 25.305 328 214 12 54 367 44 354 7.66e-18 85.9
MS.gene009891.t1 MTR_4g037465 25.547 411 225 16 38 406 9 380 8.65e-18 85.1
MS.gene009891.t1 MTR_5g027370 25.305 328 214 12 54 367 33 343 1.09e-17 85.1
MS.gene009891.t1 MTR_3g011020 28.529 340 180 17 50 374 28 319 1.09e-17 84.7
MS.gene009891.t1 MTR_5g057040 30.769 208 115 6 50 251 46 230 1.13e-17 86.3
MS.gene009891.t1 MTR_3g007270 25.312 320 206 10 50 358 47 344 1.15e-17 84.7
MS.gene009891.t1 MTR_3g058470 27.937 315 164 15 50 353 37 299 1.27e-17 84.3
MS.gene009891.t1 MTR_6g090180 25.113 442 276 15 15 421 13 434 1.38e-17 84.7
MS.gene009891.t1 MTR_4g028660 24.500 400 258 14 48 421 14 395 1.57e-17 84.3
MS.gene009891.t1 MTR_4g027450 24.500 400 258 14 48 421 14 395 1.57e-17 84.3
MS.gene009891.t1 MTR_5g010550 27.559 381 212 14 26 360 31 393 1.60e-17 85.1
MS.gene009891.t1 MTR_2g024100 27.035 344 190 12 54 371 11 319 1.73e-17 84.3
MS.gene009891.t1 MTR_5g010550 27.559 381 212 14 26 360 17 379 1.88e-17 84.7
MS.gene009891.t1 MTR_7g056003 29.794 339 180 14 53 362 18 327 2.12e-17 84.0
MS.gene009891.t1 MTR_1g055145 49.474 95 46 1 33 125 14 108 2.29e-17 82.4
MS.gene009891.t1 MTR_2g025420 26.630 368 205 12 50 379 6 346 2.44e-17 84.0
MS.gene009891.t1 MTR_5g059430 22.857 420 267 13 45 423 21 424 3.21e-17 83.6
MS.gene009891.t1 MTR_4g030830 26.648 349 190 13 47 362 6 321 3.21e-17 83.6
MS.gene009891.t1 MTR_7g077970 28.274 336 203 13 53 363 10 332 3.22e-17 83.6
MS.gene009891.t1 MTR_1g115185 28.701 331 200 14 33 355 22 324 3.47e-17 83.6
MS.gene009891.t1 MTR_4g008790 27.711 415 207 18 53 405 42 425 3.51e-17 84.0
MS.gene009891.t1 MTR_5g008530 62.319 69 20 2 42 106 6 72 3.71e-17 76.3
MS.gene009891.t1 MTR_7g077070 28.198 344 197 14 50 359 16 343 4.00e-17 83.6
MS.gene009891.t1 MTR_2g046800 30.488 328 194 15 50 357 14 327 4.08e-17 83.2
MS.gene009891.t1 MTR_3g011100 26.606 327 189 15 50 359 235 527 4.09e-17 84.0
MS.gene009891.t1 MTR_2g021050 25.070 359 187 11 50 379 5 310 4.35e-17 82.8
MS.gene009891.t1 MTR_5g068040 27.976 336 170 15 53 362 19 308 4.43e-17 82.8
MS.gene009891.t1 MTR_0128s0070 27.933 358 185 16 38 362 10 327 4.44e-17 83.2
MS.gene009891.t1 MTR_5g056020 27.610 431 225 20 50 420 17 420 4.90e-17 83.6
MS.gene009891.t1 MTR_2g047892 27.011 348 186 14 50 366 22 332 5.74e-17 82.8
MS.gene009891.t1 MTR_7g016930 27.697 343 180 14 45 362 11 310 6.13e-17 82.0
MS.gene009891.t1 MTR_3g010920 27.742 310 171 15 50 353 44 306 6.36e-17 82.4
MS.gene009891.t1 MTR_5g010560 27.957 372 206 14 26 352 17 371 6.55e-17 82.8
MS.gene009891.t1 MTR_5g010660 27.795 331 191 10 50 366 34 330 6.72e-17 82.8
MS.gene009891.t1 MTR_7g050480 26.801 347 190 12 33 353 4 312 6.96e-17 82.4
MS.gene009891.t1 MTR_3g096250 27.900 319 149 15 50 359 47 293 9.12e-17 81.6
MS.gene009891.t1 MTR_2g031680 25.356 351 195 13 50 376 6 313 1.24e-16 81.6
MS.gene009891.t1 MTR_7g050520 26.225 347 192 12 33 353 4 312 1.57e-16 81.3
MS.gene009891.t1 MTR_6g027910 25.688 327 191 12 50 353 9 306 1.60e-16 81.3
MS.gene009891.t1 MTR_0097s0030 25.691 362 213 11 53 393 17 343 1.84e-16 81.3
MS.gene009891.t1 MTR_2g047240 25.691 362 213 11 53 393 17 343 1.84e-16 81.3
MS.gene009891.t1 MTR_2g104340 27.635 351 189 14 45 357 9 332 1.89e-16 81.3
MS.gene009891.t1 MTR_4g019990 27.273 341 199 11 48 362 4 321 2.03e-16 80.9
MS.gene009891.t1 MTR_6g055210 27.353 340 200 11 39 352 11 329 2.16e-16 81.3
MS.gene009891.t1 MTR_5g010610 28.198 344 189 13 50 352 34 360 2.27e-16 81.6
MS.gene009891.t1 MTR_0064s0160 25.000 408 248 17 49 424 41 422 2.38e-16 81.3
MS.gene009891.t1 MTR_4g028750 27.679 336 197 16 46 353 12 329 2.53e-16 80.9
MS.gene009891.t1 MTR_0054s0100 23.445 418 258 13 45 423 12 406 2.54e-16 80.9
MS.gene009891.t1 MTR_1g055375 27.492 331 191 19 48 361 2 300 2.61e-16 80.5
MS.gene009891.t1 MTR_5g037680 26.347 334 206 10 45 357 3 317 2.65e-16 80.9
MS.gene009891.t1 MTR_7g017040 24.515 412 248 15 45 421 11 394 3.49e-16 80.5
MS.gene009891.t1 MTR_3g030350 27.841 352 200 15 37 373 16 328 4.93e-16 79.7
MS.gene009891.t1 MTR_0627s0010 26.053 380 217 14 14 354 3 357 4.98e-16 80.1
MS.gene009891.t1 MTR_5g069930 26.744 344 184 14 49 362 5 310 5.05e-16 79.7
MS.gene009891.t1 MTR_3g010970 27.974 311 169 16 53 353 51 316 5.15e-16 79.7
MS.gene009891.t1 MTR_5g097680 25.467 428 256 14 45 423 12 425 5.35e-16 80.1
MS.gene009891.t1 MTR_7g056737 28.107 338 194 12 43 362 15 321 5.92e-16 79.7
MS.gene009891.t1 MTR_0760s0010 26.630 368 221 14 55 418 52 374 6.01e-16 79.7
MS.gene009891.t1 MTR_4g014370 25.581 430 241 17 45 423 6 407 1.01e-15 79.0
MS.gene009891.t1 MTR_6g086825 25.917 409 250 17 49 423 69 458 1.06e-15 79.3
MS.gene009891.t1 MTR_3g023940 26.935 323 177 14 50 353 34 316 1.07e-15 78.6
MS.gene009891.t1 MTR_7g022600 26.343 391 193 16 22 362 6 351 1.08e-15 79.0
MS.gene009891.t1 MTR_7g077990 27.003 337 198 13 46 362 13 321 1.10e-15 79.0
MS.gene009891.t1 MTR_1g054575 26.111 360 207 14 20 366 27 340 1.19e-15 79.7
MS.gene009891.t1 MTR_0649s0020 26.150 413 227 15 50 420 11 387 1.21e-15 78.6
MS.gene009891.t1 MTR_3g010870 26.730 318 176 14 50 353 37 311 1.24e-15 78.6
MS.gene009891.t1 MTR_7g056797 31.364 220 113 7 48 251 21 218 1.45e-15 78.6
MS.gene009891.t1 MTR_0115s0020 23.684 418 247 18 50 424 10 398 1.56e-15 78.2
MS.gene009891.t1 MTR_7g028660 25.070 355 212 9 48 377 9 334 1.83e-15 78.2
MS.gene009891.t1 MTR_2g461450 27.726 321 174 11 53 359 21 297 1.91e-15 77.8
MS.gene009891.t1 MTR_8g046310 26.433 314 202 11 53 357 19 312 2.00e-15 77.8
MS.gene009891.t1 MTR_7g055870 26.519 362 188 15 53 363 16 350 2.07e-15 78.2
MS.gene009891.t1 MTR_4g130330 25.432 405 238 15 44 416 1 373 2.53e-15 77.8
MS.gene009891.t1 MTR_1g007410 26.062 353 208 15 42 363 14 344 2.61e-15 77.8
MS.gene009891.t1 MTR_3g009260 27.019 322 181 13 50 359 41 320 3.91e-15 77.0
MS.gene009891.t1 MTR_3g024150 27.778 324 162 17 53 353 38 312 4.30e-15 77.0
MS.gene009891.t1 MTR_6g080680 25.743 404 237 16 48 419 17 389 5.15e-15 76.6
MS.gene009891.t1 MTR_6g017280 28.909 339 185 16 50 362 9 317 5.50e-15 76.6
MS.gene009891.t1 MTR_1g009110 23.485 396 250 13 37 410 1 365 6.75e-15 76.3
MS.gene009891.t1 MTR_1g029650 25.296 423 235 19 53 422 11 405 6.93e-15 76.3
MS.gene009891.t1 MTR_4g030980 24.863 366 212 12 44 362 9 358 7.12e-15 76.6
MS.gene009891.t1 MTR_1g015730 25.301 332 201 10 49 362 8 310 9.26e-15 75.9
MS.gene009891.t1 MTR_3g011650 29.707 239 124 10 52 281 81 284 9.63e-15 74.7
MS.gene009891.t1 MTR_6g046320 27.342 395 209 21 14 354 3 373 1.04e-14 76.3
MS.gene009891.t1 MTR_8g041270 24.460 417 255 14 45 423 10 404 1.11e-14 75.9
MS.gene009891.t1 MTR_7g079160 27.123 365 199 13 48 362 6 353 1.39e-14 75.9
MS.gene009891.t1 MTR_7g055977 25.060 419 235 16 44 421 1 381 2.05e-14 74.7
MS.gene009891.t1 MTR_5g022045 25.067 375 215 13 14 354 3 345 2.08e-14 75.1
MS.gene009891.t1 MTR_2g025960 30.734 218 120 10 164 357 5 215 2.14e-14 73.9
MS.gene009891.t1 MTR_7g056717 27.879 330 181 13 55 362 27 321 2.29e-14 74.7
MS.gene009891.t1 MTR_2g078850 27.508 309 184 12 53 353 33 309 2.42e-14 74.3
MS.gene009891.t1 MTR_2g437110 26.957 345 183 17 50 362 22 329 3.52e-14 74.7
MS.gene009891.t1 MTR_7g078840 27.500 360 197 12 48 362 8 348 3.57e-14 74.3
MS.gene009891.t1 MTR_7g055930 25.556 360 194 14 53 363 16 350 4.13e-14 74.3
MS.gene009891.t1 MTR_3g464500 25.926 378 205 17 39 377 16 357 4.93e-14 73.9
MS.gene009891.t1 MTR_2g021800 24.762 420 261 16 42 421 8 412 5.61e-14 73.6
MS.gene009891.t1 MTR_6g013270 27.302 315 193 12 50 355 29 316 5.77e-14 73.6
MS.gene009891.t1 MTR_8g099460 26.586 331 186 11 50 357 5 301 5.99e-14 73.6
MS.gene009891.t1 MTR_7g056710 26.377 345 196 14 40 362 8 316 6.17e-14 73.6
MS.gene009891.t1 MTR_3g006530 25.397 315 194 12 50 353 40 324 7.24e-14 73.2
MS.gene009891.t1 MTR_1g112930 25.078 319 185 13 50 355 25 302 1.46e-13 72.0
MS.gene009891.t1 MTR_4g134560 26.055 403 232 18 23 378 4 387 1.71e-13 72.4
MS.gene009891.t1 MTR_4g080200 26.562 320 171 11 53 353 6 280 1.80e-13 71.6
MS.gene009891.t1 MTR_7g017130 26.409 337 197 16 50 357 18 332 1.93e-13 72.0
MS.gene009891.t1 MTR_7g017170 26.409 337 197 16 50 357 18 332 2.31e-13 71.6
MS.gene009891.t1 MTR_4g031020 24.658 365 214 14 44 362 9 358 3.37e-13 71.2
MS.gene009891.t1 MTR_8g064890 26.586 331 193 15 48 353 14 319 3.61e-13 71.2
MS.gene009891.t1 MTR_4g030110 25.071 351 192 11 38 362 18 323 4.36e-13 70.9
MS.gene009891.t1 MTR_7g079640 25.424 354 215 17 43 378 6 328 6.23e-13 70.5
MS.gene009891.t1 MTR_7g052670 26.588 425 239 20 49 420 20 424 6.99e-13 70.5
MS.gene009891.t1 MTR_5g048160 24.533 428 230 20 50 424 4 391 7.15e-13 70.1
MS.gene009891.t1 MTR_1g055055 23.582 335 202 13 50 377 26 313 7.16e-13 69.7
MS.gene009891.t1 MTR_7g035295 25.926 324 188 12 50 359 16 301 8.41e-13 70.1
MS.gene009891.t1 MTR_5g096900 29.492 295 172 13 43 319 5 281 1.23e-12 68.9
MS.gene009891.t1 MTR_7g052150 26.176 340 183 13 50 360 22 322 1.38e-12 69.3
MS.gene009891.t1 MTR_6g004210 25.970 335 182 15 61 359 36 340 1.40e-12 69.3
MS.gene009891.t1 MTR_7g056570 26.822 343 180 16 49 362 17 317 1.69e-12 69.3
MS.gene009891.t1 MTR_4g129160 26.074 349 213 15 44 362 1 334 1.77e-12 68.9
MS.gene009891.t1 MTR_4g055820 25.145 346 210 10 45 357 9 338 2.05e-12 68.6
MS.gene009891.t1 MTR_4g028680 25.595 336 214 13 46 357 12 335 3.52e-12 68.2
MS.gene009891.t1 MTR_5g023570 36.508 126 55 4 49 173 36 137 4.25e-12 63.9
MS.gene009891.t1 MTR_8g013005 61.224 49 19 0 375 423 6 54 4.51e-12 61.2
MS.gene009891.t1 MTR_3g009250 28.631 241 127 10 50 281 41 245 5.27e-12 65.9
MS.gene009891.t1 MTR_6g017270 25.077 323 160 14 53 362 12 265 8.99e-12 66.6
MS.gene009891.t1 MTR_3g010620 25.161 310 182 12 50 353 36 301 9.01e-12 66.6
MS.gene009891.t1 MTR_2g022000 24.156 385 242 14 45 391 11 383 1.05e-11 66.6
MS.gene009891.t1 MTR_7g022670 24.850 334 154 11 50 362 23 280 1.06e-11 66.2
MS.gene009891.t1 MTR_7g037670 25.940 266 150 9 50 305 23 251 1.35e-11 65.9
MS.gene009891.t1 MTR_3g010870 28.182 220 112 9 50 258 37 221 3.00e-11 64.7
MS.gene009891.t1 MTR_5g094350 24.830 294 156 10 48 307 11 273 3.34e-11 63.9
MS.gene009891.t1 MTR_4g023100 54.386 57 23 2 373 429 66 119 3.34e-11 60.8
MS.gene009891.t1 MTR_4g030760 24.011 354 215 14 43 377 66 384 4.07e-11 65.1
MS.gene009891.t1 MTR_7g069550 24.462 372 217 15 45 378 9 354 6.26e-11 64.3
MS.gene009891.t1 MTR_7g050490 27.907 215 109 6 49 250 7 188 6.36e-11 61.6
MS.gene009891.t1 MTR_7g055850 29.146 199 97 8 53 221 16 200 9.98e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009891.t1 AT4G12560 29.448 326 186 10 50 357 4 303 5.61e-27 112
MS.gene009891.t1 AT4G12560 29.448 326 186 10 50 357 4 303 5.61e-27 112
MS.gene009891.t1 AT4G12560 29.448 326 186 10 50 357 4 303 5.61e-27 112
MS.gene009891.t1 AT3G23880 28.767 365 216 17 37 391 1 331 1.51e-21 95.9
MS.gene009891.t1 AT3G06240 26.341 410 237 15 50 420 36 419 8.93e-21 94.4
MS.gene009891.t1 AT2G40925 26.061 330 206 11 40 357 17 320 5.08e-15 77.0
MS.gene009891.t1 AT4G21240 26.453 344 205 14 25 359 16 320 2.06e-14 75.1
MS.gene009891.t1 AT1G30790 27.640 322 198 14 45 353 4 303 2.07e-14 75.1
MS.gene009891.t1 AT4G19930 28.173 323 195 13 49 357 42 341 4.91e-13 70.9
MS.gene009891.t1 AT2G16810 28.364 275 165 11 39 307 30 278 6.03e-13 69.7
MS.gene009891.t1 AT4G19940 27.273 308 185 9 50 343 35 317 6.71e-13 70.5
MS.gene009891.t1 AT3G47150 32.979 188 101 6 46 226 8 177 8.55e-13 69.7
MS.gene009891.t1 AT3G10240 26.254 339 206 14 50 379 27 330 5.97e-12 67.4
MS.gene009891.t1 AT1G12870 22.785 395 230 17 44 404 27 380 1.56e-11 66.2
MS.gene009891.t1 AT3G21120 28.889 180 103 6 49 222 2 162 3.72e-11 64.7
MS.gene009891.t1 AT1G33530 24.859 354 200 13 19 354 62 367 3.99e-11 65.1
MS.gene009891.t1 AT1G50870 25.767 326 189 14 32 343 12 298 6.22e-11 64.3

Find 83 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAATTATTTCTATGGTTT+TGG 0.146874 5.3:+55856644 MS.gene009891:CDS
AACAAACATGCATAGTTTAT+TGG 0.206624 5.3:+55857180 MS.gene009891:CDS
ACTTGACTGGTAACCTTAAT+AGG 0.238398 5.3:-55856214 None:intergenic
CCAGATGCAAATTATTTCTA+TGG 0.242234 5.3:+55856638 MS.gene009891:CDS
CTGGTAACCTTAATAGGATT+TGG 0.245513 5.3:-55856208 None:intergenic
GTTATTCAAGCCTCCGTATA+TGG 0.286074 5.3:+55856561 MS.gene009891:CDS
GCCTTCCTACTCGCTGCTTT+TGG 0.288891 5.3:+55857122 MS.gene009891:CDS
AAAATACTGTCCTGCGAATA+AGG 0.289089 5.3:-55856809 None:intergenic
TAATCATCCAAATCCTATTA+AGG 0.290405 5.3:+55856201 MS.gene009891:CDS
GAATCTCTGCTTTCAATTCC+TGG 0.293988 5.3:+55857286 MS.gene009891:CDS
GTGGAATCAAGTGTAGTAAA+AGG 0.326791 5.3:-55856614 None:intergenic
ATAAAGGTGCAGTTGAAATA+TGG 0.331433 5.3:+55857038 MS.gene009891:CDS
ATAAAGGATGTCTTGCTCTA+TGG 0.333566 5.3:+55857002 MS.gene009891:CDS
CTGTCCTTTGTCATTATACT+TGG 0.343254 5.3:-55857203 None:intergenic
CTAGTAGTGTGTATGAATTA+TGG 0.346010 5.3:+55856975 MS.gene009891:CDS
TCCTACTGTGACAATGAATA+TGG 0.352513 5.3:+55857241 MS.gene009891:CDS
CGGTGGATGGATTCCATATA+CGG 0.362666 5.3:-55856574 None:intergenic
ATAGATAGAGATTCAAGATA+TGG 0.384509 5.3:-55856359 None:intergenic
AGTTATCAACTGAATTCTAT+TGG 0.384764 5.3:-55856336 None:intergenic
AAATGTGAATTTGCGAAATC+AGG 0.390581 5.3:-55856290 None:intergenic
AGGTATTTGTTTGTGAAATC+CGG 0.393264 5.3:-55856594 None:intergenic
TGGGATCTTTCGTCTGATAA+AGG 0.394653 5.3:+55857022 MS.gene009891:CDS
ATATCAATTCGTGTTATTGT+TGG 0.407133 5.3:+55856890 MS.gene009891:CDS
ATTTGGATGATTAACTCAAT+AGG 0.413234 5.3:-55856191 None:intergenic
TAGTAGTGTGTATGAATTAT+GGG 0.419654 5.3:+55856976 MS.gene009891:CDS
TCTCAAATGGTGCTCTTCAC+TGG 0.420308 5.3:+55856849 MS.gene009891:CDS
GGACCATACACTATATCATT+TGG 0.433518 5.3:-55856953 None:intergenic
CATAATTCATACACACTACT+AGG 0.438164 5.3:-55856974 None:intergenic
ATAGTTCTTCTTCGTCGGAC+AGG 0.438426 5.3:+55856462 MS.gene009891:CDS
AAATGGTGCTCTTCACTGGT+TGG 0.443938 5.3:+55856853 MS.gene009891:CDS
TATGAATTATGGGTGTATAA+AGG 0.444879 5.3:+55856986 MS.gene009891:CDS
AGAGCTCGGACTCGGTTCAT+AGG 0.446194 5.3:-55856708 None:intergenic
CCATAGAAATAATTTGCATC+TGG 0.448545 5.3:-55856638 None:intergenic
TAAAGGATGTCTTGCTCTAT+GGG 0.453000 5.3:+55857003 MS.gene009891:CDS
TTGGCTTTCATTTAATTGAA+AGG 0.461881 5.3:+55856909 MS.gene009891:CDS
TTATTATAGTTCTTCTTCGT+CGG 0.478050 5.3:+55856457 MS.gene009891:CDS
CGAGTCAACAGATGATTACT+TGG 0.478220 5.3:+55856673 MS.gene009891:CDS
CACCAACAAATAAAAGAGTT+GGG 0.479055 5.3:+55856069 MS.gene009891:CDS
TTTATTTGTTGGTGGGAGGA+TGG 0.479615 5.3:-55856060 None:intergenic
TCAAATGCGTTTGTAAGTCA+TGG 0.482109 5.3:+55856249 MS.gene009891:CDS
TTGCCAAATGATATAGTGTA+TGG 0.486438 5.3:+55856950 MS.gene009891:CDS
AATACAATGTGCAATCGTCT+TGG 0.487961 5.3:+55857071 MS.gene009891:CDS
GAAACAACAGTCACAGGCCG+GGG 0.488233 5.3:+55856123 MS.gene009891:CDS
TGATGGTATGCTATCTCACT+TGG 0.499072 5.3:+55856730 MS.gene009891:CDS
TTAGTGGAGTCGCTCTCAAA+TGG 0.507369 5.3:+55856836 MS.gene009891:CDS
CCACCAACAAATAAAAGAGT+TGG 0.508332 5.3:+55856068 MS.gene009891:CDS
GAACCGAGTCCGAGCTCTGA+TGG 0.517994 5.3:+55856713 MS.gene009891:CDS
TTCTGTATACATAACCTTGA+GGG 0.520895 5.3:-55857266 None:intergenic
AGAAACAACAGTCACAGGCC+GGG 0.521224 5.3:+55856122 MS.gene009891:CDS
TAGAAACAACAGTCACAGGC+CGG 0.533130 5.3:+55856121 MS.gene009891:CDS
TAATGTGTGGAGCGAAATTG+AGG 0.540435 5.3:+55856772 MS.gene009891:CDS
TCAATTCCTGGTGGTGACAG+TGG 0.541479 5.3:+55857298 MS.gene009891:CDS
TAGTTCTTCTTCGTCGGACA+GGG 0.544528 5.3:+55856463 MS.gene009891:CDS
TAAAGGTGCAGTTGAAATAT+GGG 0.548466 5.3:+55857039 MS.gene009891:CDS
ATACCATCAGAGCTCGGACT+CGG 0.552731 5.3:-55856716 None:intergenic
GATTTCAAAGGTTCATGTAG+AGG 0.552982 5.3:+55856521 MS.gene009891:CDS
GGACTAGAGGAGGAAGACGC+AGG 0.560801 5.3:+55856146 MS.gene009891:CDS
CGACTAGAAACAACAGTCAC+AGG 0.569565 5.3:+55856117 MS.gene009891:CDS
GAAATAATTTGCATCTGGAG+TGG 0.573708 5.3:-55856633 None:intergenic
AAACGAATAAGAGACTTGAC+TGG 0.580937 5.3:-55856227 None:intergenic
TGTGTGTCGCGGCAGTAAGT+TGG 0.583141 5.3:-55856313 None:intergenic
TGCAGTTGAAATATGGGTGA+TGG 0.589143 5.3:+55857045 MS.gene009891:CDS
TCTCATTGAGAGCTAATGTG+TGG 0.589751 5.3:+55856759 MS.gene009891:CDS
TCAAACAAAGAACTAATGTC+CGG 0.589806 5.3:-55856425 None:intergenic
TGTTTGTGAAATCCGGTGGA+TGG 0.595304 5.3:-55856587 None:intergenic
ACTTGACCACTGTCACCACC+AGG 0.596131 5.3:-55857304 None:intergenic
TCCATATTCATTGTCACAGT+AGG 0.596716 5.3:-55857242 None:intergenic
CGTATATGGAATCCATCCAC+CGG 0.597368 5.3:+55856575 MS.gene009891:CDS
GCCAAAAGCAGCGAGTAGGA+AGG 0.602964 5.3:-55857123 None:intergenic
GATGGTATGCTATCTCACTT+GGG 0.616133 5.3:+55856731 MS.gene009891:CDS
CAATGAATATGGATCCCTCA+AGG 0.623502 5.3:+55857252 MS.gene009891:CDS
TTGGCCAAGTATAATGACAA+AGG 0.625260 5.3:+55857199 MS.gene009891:CDS
AATTCTATTGGTGTGTGTCG+CGG 0.629333 5.3:-55856324 None:intergenic
ATTCTGTATACATAACCTTG+AGG 0.635872 5.3:-55857267 None:intergenic
TATTTGTTTGTGAAATCCGG+TGG 0.641042 5.3:-55856591 None:intergenic
GATAGCATACCATCAGAGCT+CGG 0.646205 5.3:-55856722 None:intergenic
AAACAACAGTCACAGGCCGG+GGG 0.663167 5.3:+55856124 MS.gene009891:CDS
TTCGGCCAAAAGCAGCGAGT+AGG 0.672610 5.3:-55857127 None:intergenic
GTGTGGAGCGAAATTGAGGG+TGG 0.690291 5.3:+55856776 MS.gene009891:CDS
TCTCTGCTTTCAATTCCTGG+TGG 0.696103 5.3:+55857289 MS.gene009891:CDS
AATGTGTGGAGCGAAATTGA+GGG 0.700355 5.3:+55856773 MS.gene009891:CDS
TGGATGGATTCCATATACGG+AGG 0.720108 5.3:-55856571 None:intergenic
AACAACAGTCACAGGCCGGG+GGG 0.732676 5.3:+55856125 MS.gene009891:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAAAATTGATTTCAA+AGG + chr5.3:55856509-55856528 MS.gene009891:CDS 10.0%
!!! ATTTTAAAAAAATATTTGGG+AGG - chr5.3:55856500-55856519 None:intergenic 15.0%
!!! CAAATTATTTCTATGGTTTT+GGG + chr5.3:55856645-55856664 MS.gene009891:CDS 20.0%
! AACAAACATGCATAGTTTAT+TGG + chr5.3:55857180-55857199 MS.gene009891:CDS 25.0%
! AGTTATCAACTGAATTCTAT+TGG - chr5.3:55856339-55856358 None:intergenic 25.0%
! ATAGATAGAGATTCAAGATA+TGG - chr5.3:55856362-55856381 None:intergenic 25.0%
! ATTTGGATGATTAACTCAAT+AGG - chr5.3:55856194-55856213 None:intergenic 25.0%
! TAATCATCCAAATCCTATTA+AGG + chr5.3:55856201-55856220 MS.gene009891:CDS 25.0%
! TAGTAGTGTGTATGAATTAT+GGG + chr5.3:55856976-55856995 MS.gene009891:CDS 25.0%
! TATGAATTATGGGTGTATAA+AGG + chr5.3:55856986-55857005 MS.gene009891:CDS 25.0%
! TTATTATAGTTCTTCTTCGT+CGG + chr5.3:55856457-55856476 MS.gene009891:CDS 25.0%
!! ATATCAATTCGTGTTATTGT+TGG + chr5.3:55856890-55856909 MS.gene009891:CDS 25.0%
!! TTGGCTTTCATTTAATTGAA+AGG + chr5.3:55856909-55856928 MS.gene009891:CDS 25.0%
!!! GCAAATTATTTCTATGGTTT+TGG + chr5.3:55856644-55856663 MS.gene009891:CDS 25.0%
!!! TTCTAGTCGTTTTTGATTTA+GGG - chr5.3:55856106-55856125 None:intergenic 25.0%
!!! TTTCTAGTCGTTTTTGATTT+AGG - chr5.3:55856107-55856126 None:intergenic 25.0%
!!! TTTTTGATTTAGGGTTAGTA+AGG - chr5.3:55856097-55856116 None:intergenic 25.0%
AAATGTGAATTTGCGAAATC+AGG - chr5.3:55856293-55856312 None:intergenic 30.0%
AGGTATTTGTTTGTGAAATC+CGG - chr5.3:55856597-55856616 None:intergenic 30.0%
ATTCTGTATACATAACCTTG+AGG - chr5.3:55857270-55857289 None:intergenic 30.0%
CACCAACAAATAAAAGAGTT+GGG + chr5.3:55856069-55856088 MS.gene009891:CDS 30.0%
CATAATTCATACACACTACT+AGG - chr5.3:55856977-55856996 None:intergenic 30.0%
CTAGTAGTGTGTATGAATTA+TGG + chr5.3:55856975-55856994 MS.gene009891:CDS 30.0%
TCAAACAAAGAACTAATGTC+CGG - chr5.3:55856428-55856447 None:intergenic 30.0%
TTCTGTATACATAACCTTGA+GGG - chr5.3:55857269-55857288 None:intergenic 30.0%
TTGCCAAATGATATAGTGTA+TGG + chr5.3:55856950-55856969 MS.gene009891:CDS 30.0%
! ATAAAGGTGCAGTTGAAATA+TGG + chr5.3:55857038-55857057 MS.gene009891:CDS 30.0%
! CCATAGAAATAATTTGCATC+TGG - chr5.3:55856641-55856660 None:intergenic 30.0%
! TAAAGGTGCAGTTGAAATAT+GGG + chr5.3:55857039-55857058 MS.gene009891:CDS 30.0%
!! CAACTCTTTTATTTGTTGGT+GGG - chr5.3:55856070-55856089 None:intergenic 30.0%
!! CCAGATGCAAATTATTTCTA+TGG + chr5.3:55856638-55856657 MS.gene009891:CDS 30.0%
!! GGACAGTATTTTAAACTTAG+TGG + chr5.3:55856820-55856839 MS.gene009891:CDS 30.0%
!! TTCCCAACTCTTTTATTTGT+TGG - chr5.3:55856074-55856093 None:intergenic 30.0%
!!! CCACTTTTTGCATAGTATTT+CGG - chr5.3:55857148-55857167 None:intergenic 30.0%
AAAATACTGTCCTGCGAATA+AGG - chr5.3:55856812-55856831 None:intergenic 35.0%
AAACGAATAAGAGACTTGAC+TGG - chr5.3:55856230-55856249 None:intergenic 35.0%
AATACAATGTGCAATCGTCT+TGG + chr5.3:55857071-55857090 MS.gene009891:CDS 35.0%
ACTTGACTGGTAACCTTAAT+AGG - chr5.3:55856217-55856236 None:intergenic 35.0%
ATAAAGGATGTCTTGCTCTA+TGG + chr5.3:55857002-55857021 MS.gene009891:CDS 35.0%
CCACCAACAAATAAAAGAGT+TGG + chr5.3:55856068-55856087 MS.gene009891:CDS 35.0%
CCGAAATACTATGCAAAAAG+TGG + chr5.3:55857145-55857164 MS.gene009891:CDS 35.0%
CTGGTAACCTTAATAGGATT+TGG - chr5.3:55856211-55856230 None:intergenic 35.0%
CTGTCCTTTGTCATTATACT+TGG - chr5.3:55857206-55857225 None:intergenic 35.0%
GATTTCAAAGGTTCATGTAG+AGG + chr5.3:55856521-55856540 MS.gene009891:CDS 35.0%
GGACCATACACTATATCATT+TGG - chr5.3:55856956-55856975 None:intergenic 35.0%
GTGGAATCAAGTGTAGTAAA+AGG - chr5.3:55856617-55856636 None:intergenic 35.0%
TAAAGGATGTCTTGCTCTAT+GGG + chr5.3:55857003-55857022 MS.gene009891:CDS 35.0%
TATTTGTTTGTGAAATCCGG+TGG - chr5.3:55856594-55856613 None:intergenic 35.0%
TCAAATGCGTTTGTAAGTCA+TGG + chr5.3:55856249-55856268 MS.gene009891:CDS 35.0%
TCCATATTCATTGTCACAGT+AGG - chr5.3:55857245-55857264 None:intergenic 35.0%
TCCTACTGTGACAATGAATA+TGG + chr5.3:55857241-55857260 MS.gene009891:CDS 35.0%
TTGGCCAAGTATAATGACAA+AGG + chr5.3:55857199-55857218 MS.gene009891:CDS 35.0%
! ACTCTTGTTCTGTCTTTTGA+TGG + chr5.3:55857100-55857119 MS.gene009891:CDS 35.0%
! GAAATAATTTGCATCTGGAG+TGG - chr5.3:55856636-55856655 None:intergenic 35.0%
!! CCAACTCTTTTATTTGTTGG+TGG - chr5.3:55856071-55856090 None:intergenic 35.0%
!! TAAACTTTTGCCTTATTCGC+AGG + chr5.3:55856799-55856818 MS.gene009891:CDS 35.0%
!! TGATAGCGCTTTTTATTCAC+CGG + chr5.3:55856406-55856425 MS.gene009891:CDS 35.0%
AATGTGTGGAGCGAAATTGA+GGG + chr5.3:55856773-55856792 MS.gene009891:CDS 40.0%
AATTCTATTGGTGTGTGTCG+CGG - chr5.3:55856327-55856346 None:intergenic 40.0%
CAATGAATATGGATCCCTCA+AGG + chr5.3:55857252-55857271 MS.gene009891:CDS 40.0%
CGAGTCAACAGATGATTACT+TGG + chr5.3:55856673-55856692 MS.gene009891:CDS 40.0%
GAATCTCTGCTTTCAATTCC+TGG + chr5.3:55857286-55857305 MS.gene009891:CDS 40.0%
GATGGTATGCTATCTCACTT+GGG + chr5.3:55856731-55856750 MS.gene009891:CDS 40.0%
GCAAAAAGTGGTGATATCGT+TGG + chr5.3:55857157-55857176 MS.gene009891:CDS 40.0%
GTTATTCAAGCCTCCGTATA+TGG + chr5.3:55856561-55856580 MS.gene009891:CDS 40.0%
TAATGTGTGGAGCGAAATTG+AGG + chr5.3:55856772-55856791 MS.gene009891:CDS 40.0%
TCTCATTGAGAGCTAATGTG+TGG + chr5.3:55856759-55856778 MS.gene009891:CDS 40.0%
TGATGGTATGCTATCTCACT+TGG + chr5.3:55856730-55856749 MS.gene009891:CDS 40.0%
TGCAGTTGAAATATGGGTGA+TGG + chr5.3:55857045-55857064 MS.gene009891:CDS 40.0%
TGGGATCTTTCGTCTGATAA+AGG + chr5.3:55857022-55857041 MS.gene009891:CDS 40.0%
! TTTATTTGTTGGTGGGAGGA+TGG - chr5.3:55856063-55856082 None:intergenic 40.0%
!! CTCTTTTATTTGTTGGTGGG+AGG - chr5.3:55856067-55856086 None:intergenic 40.0%
AAATGGTGCTCTTCACTGGT+TGG + chr5.3:55856853-55856872 MS.gene009891:CDS 45.0%
ATAGTTCTTCTTCGTCGGAC+AGG + chr5.3:55856462-55856481 MS.gene009891:CDS 45.0%
CGACTAGAAACAACAGTCAC+AGG + chr5.3:55856117-55856136 MS.gene009891:CDS 45.0%
CGTATATGGAATCCATCCAC+CGG + chr5.3:55856575-55856594 MS.gene009891:CDS 45.0%
GATAGCATACCATCAGAGCT+CGG - chr5.3:55856725-55856744 None:intergenic 45.0%
TAGAAACAACAGTCACAGGC+CGG + chr5.3:55856121-55856140 MS.gene009891:CDS 45.0%
TAGTTCTTCTTCGTCGGACA+GGG + chr5.3:55856463-55856482 MS.gene009891:CDS 45.0%
TCTCAAATGGTGCTCTTCAC+TGG + chr5.3:55856849-55856868 MS.gene009891:CDS 45.0%
TCTCTGCTTTCAATTCCTGG+TGG + chr5.3:55857289-55857308 MS.gene009891:CDS 45.0%
TGTTTGTGAAATCCGGTGGA+TGG - chr5.3:55856590-55856609 None:intergenic 45.0%
TTAGTGGAGTCGCTCTCAAA+TGG + chr5.3:55856836-55856855 MS.gene009891:CDS 45.0%
! CGGTGGATGGATTCCATATA+CGG - chr5.3:55856577-55856596 None:intergenic 45.0%
! TGGATGGATTCCATATACGG+AGG - chr5.3:55856574-55856593 None:intergenic 45.0%
!!! ATCAATTTTAAAAAAATATT+TGG - chr5.3:55856504-55856523 None:intergenic 5.0%
!!! TCAATTTTAAAAAAATATTT+GGG - chr5.3:55856503-55856522 None:intergenic 5.0%
AGAAACAACAGTCACAGGCC+GGG + chr5.3:55856122-55856141 MS.gene009891:CDS 50.0%
ATACCATCAGAGCTCGGACT+CGG - chr5.3:55856719-55856738 None:intergenic 50.0%
! TCAATTCCTGGTGGTGACAG+TGG + chr5.3:55857298-55857317 MS.gene009891:CDS 50.0%
AAACAACAGTCACAGGCCGG+GGG + chr5.3:55856124-55856143 MS.gene009891:CDS 55.0%
ACTTGACCACTGTCACCACC+AGG - chr5.3:55857307-55857326 None:intergenic 55.0%
GAAACAACAGTCACAGGCCG+GGG + chr5.3:55856123-55856142 MS.gene009891:CDS 55.0%
GCCAAAAGCAGCGAGTAGGA+AGG - chr5.3:55857126-55857145 None:intergenic 55.0%
GTGTGGAGCGAAATTGAGGG+TGG + chr5.3:55856776-55856795 MS.gene009891:CDS 55.0%
TGTGTGTCGCGGCAGTAAGT+TGG - chr5.3:55856316-55856335 None:intergenic 55.0%
TTCGGCCAAAAGCAGCGAGT+AGG - chr5.3:55857130-55857149 None:intergenic 55.0%
! AGAGCTCGGACTCGGTTCAT+AGG - chr5.3:55856711-55856730 None:intergenic 55.0%
!! GCCTTCCTACTCGCTGCTTT+TGG + chr5.3:55857122-55857141 MS.gene009891:CDS 55.0%
AACAACAGTCACAGGCCGGG+GGG + chr5.3:55856125-55856144 MS.gene009891:CDS 60.0%
GGACTAGAGGAGGAAGACGC+AGG + chr5.3:55856146-55856165 MS.gene009891:CDS 60.0%
TCTTCCTCCTCTAGTCCCCC+CGG - chr5.3:55856143-55856162 None:intergenic 60.0%
! GAACCGAGTCCGAGCTCTGA+TGG + chr5.3:55856713-55856732 MS.gene009891:CDS 60.0%
TCACAGGCCGGGGGGACTAG+AGG + chr5.3:55856133-55856152 MS.gene009891:CDS 70.0%
CAGGCCGGGGGGACTAGAGG+AGG + chr5.3:55856136-55856155 MS.gene009891:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 55856041 55857330 55856041 ID=MS.gene009891
chr5.3 mRNA 55856041 55857330 55856041 ID=MS.gene009891.t1;Parent=MS.gene009891
chr5.3 exon 55856041 55857330 55856041 ID=MS.gene009891.t1.exon1;Parent=MS.gene009891.t1
chr5.3 CDS 55856041 55857330 55856041 ID=cds.MS.gene009891.t1;Parent=MS.gene009891.t1
Gene Sequence

>MS.gene009891

ATGGCAAATAGGTCTTTTACCATCCTCCCACCAACAAATAAAAGAGTTGGGAACCTTACTAACCCTAAATCAAAAACGACTAGAAACAACAGTCACAGGCCGGGGGGACTAGAGGAGGAAGACGCAGGAATGCAGACAGAGACATATCTTCCTATTGAGTTAATCATCCAAATCCTATTAAGGTTACCAGTCAAGTCTCTTATTCGTTTCAAATGCGTTTGTAAGTCATGGTTTTCTCTTATCTCTCAACCTGATTTCGCAAATTCACATTTCCAACTTACTGCCGCGACACACACCAATAGAATTCAGTTGATAACTCCATATCTTGAATCTCTATCTATAGATCTTGAATCATCGCTTAGCGATGATAGCGCTTTTTATTCACCGGACATTAGTTCTTTGTTTGACGATGATGATTATTATAGTTCTTCTTCGTCGGACAGGGATGATTTAATGCCTCCCAAATATTTTTTTAAAATTGATTTCAAAGGTTCATGTAGAGGCTTTATACTTTTGAACTGTTATTCAAGCCTCCGTATATGGAATCCATCCACCGGATTTCACAAACAAATACCTTTTACTACACTTGATTCCACTCCAGATGCAAATTATTTCTATGGTTTTGGGTATGACGAGTCAACAGATGATTACTTGGTGCTTTCAATGTCCTATGAACCGAGTCCGAGCTCTGATGGTATGCTATCTCACTTGGGAATTTTCTCATTGAGAGCTAATGTGTGGAGCGAAATTGAGGGTGGTAAACTTTTGCCTTATTCGCAGGACAGTATTTTAAACTTAGTGGAGTCGCTCTCAAATGGTGCTCTTCACTGGTTGGCTTATCGTGATGATATATCAATTCGTGTTATTGTTGGCTTTCATTTAATTGAAAGGAAACTTCTAGAGTTGCGTTTGCCAAATGATATAGTGTATGGTCCTAGTAGTGTGTATGAATTATGGGTGTATAAAGGATGTCTTGCTCTATGGGATCTTTCGTCTGATAAAGGTGCAGTTGAAATATGGGTGATGGAAAAATACAATGTGCAATCGTCTTGGACTAAGACTCTTGTTCTGTCTTTTGATGGCCTTCCTACTCGCTGCTTTTGGCCGAAATACTATGCAAAAAGTGGTGATATCGTTGGAACAAACATGCATAGTTTATTGGCCAAGTATAATGACAAAGGACAGCTGCAAGAGCATCGCTCCTACTGTGACAATGAATATGGATCCCTCAAGGTTATGTATACAGAATCTCTGCTTTCAATTCCTGGTGGTGACAGTGGTCAAGTTTAA

Protein sequence

>MS.gene009891.t1

MANRSFTILPPTNKRVGNLTNPKSKTTRNNSHRPGGLEEEDAGMQTETYLPIELIIQILLRLPVKSLIRFKCVCKSWFSLISQPDFANSHFQLTAATHTNRIQLITPYLESLSIDLESSLSDDSAFYSPDISSLFDDDDYYSSSSSDRDDLMPPKYFFKIDFKGSCRGFILLNCYSSLRIWNPSTGFHKQIPFTTLDSTPDANYFYGFGYDESTDDYLVLSMSYEPSPSSDGMLSHLGIFSLRANVWSEIEGGKLLPYSQDSILNLVESLSNGALHWLAYRDDISIRVIVGFHLIERKLLELRLPNDIVYGPSSVYELWVYKGCLALWDLSSDKGAVEIWVMEKYNVQSSWTKTLVLSFDGLPTRCFWPKYYAKSGDIVGTNMHSLLAKYNDKGQLQEHRSYCDNEYGSLKVMYTESLLSIPGGDSGQV