AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041491


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041491.t1 MTR_5g097210 62.953 359 127 3 2 358 3 357 3.86e-153 436
MS.gene041491.t1 MTR_3g103020 58.021 374 141 9 1 366 13 378 9.17e-135 389
MS.gene041491.t1 MTR_1g055135 57.182 369 144 9 7 366 12 375 1.18e-128 374
MS.gene041491.t1 MTR_4g109270 55.026 378 144 8 1 366 1 364 2.78e-127 370
MS.gene041491.t1 MTR_4g117750 58.011 362 134 5 6 358 1 353 2.33e-124 367
MS.gene041491.t1 MTR_4g117750 54.128 109 46 3 258 362 373 481 3.27e-26 109
MS.gene041491.t1 MTR_3g034180 52.493 381 155 10 2 365 117 488 3.81e-122 361
MS.gene041491.t1 MTR_4g117850 54.717 371 144 11 4 363 19 376 2.03e-119 350
MS.gene041491.t1 MTR_3g034160 52.646 378 159 10 2 365 3 374 4.79e-117 344
MS.gene041491.t1 MTR_4g109280 54.692 373 148 12 1 366 1 359 6.67e-117 343
MS.gene041491.t1 MTR_3g034130 51.507 365 159 8 1 350 1 362 1.94e-114 337
MS.gene041491.t1 MTR_5g070080 51.020 392 156 11 2 366 4 386 9.97e-113 333
MS.gene041491.t1 MTR_4g117770 54.047 383 141 14 1 365 1 366 1.78e-108 322
MS.gene041491.t1 MTR_4g117810 54.047 383 141 14 1 365 1 366 1.78e-108 322
MS.gene041491.t1 MTR_4g023080 51.475 373 153 11 1 365 1 353 5.20e-106 315
MS.gene041491.t1 MTR_5g070088 50.000 392 162 12 1 365 1 385 1.11e-105 316
MS.gene041491.t1 MTR_5g070130 49.344 381 171 11 1 366 4 377 2.01e-105 315
MS.gene041491.t1 MTR_6g060650 50.524 382 162 9 1 365 1 372 5.23e-105 313
MS.gene041491.t1 MTR_4g122850 51.105 362 156 12 18 365 11 365 1.76e-104 312
MS.gene041491.t1 MTR_4g023070 49.344 381 160 11 6 365 1 369 5.35e-104 311
MS.gene041491.t1 MTR_4g094365 48.267 375 170 11 1 363 1 363 2.14e-102 306
MS.gene041491.t1 MTR_4g021785 50.535 374 158 12 1 366 1 355 4.44e-102 305
MS.gene041491.t1 MTR_1g055195 61.538 273 87 5 94 358 210 472 5.85e-102 310
MS.gene041491.t1 MTR_4g023090 49.742 388 149 14 7 365 15 385 1.28e-101 305
MS.gene041491.t1 MTR_4g117720 48.819 381 134 10 1 366 44 378 1.09e-100 303
MS.gene041491.t1 MTR_4g023120 48.819 381 162 12 6 365 1 369 4.95e-100 301
MS.gene041491.t1 MTR_4g116330 50.133 377 163 14 2 366 17 380 1.59e-98 297
MS.gene041491.t1 MTR_4g117780 50.670 373 152 13 8 365 11 366 1.45e-97 294
MS.gene041491.t1 MTR_4g118380 49.730 370 140 11 1 337 1 357 3.04e-95 288
MS.gene041491.t1 MTR_4g023380 46.429 392 149 10 7 365 15 378 1.35e-94 287
MS.gene041491.t1 MTR_4g023150 49.738 382 146 14 2 364 4 358 7.13e-94 285
MS.gene041491.t1 MTR_8g433040 48.267 375 154 13 5 365 15 363 1.45e-93 284
MS.gene041491.t1 MTR_8g032380 48.267 375 154 13 5 365 15 363 1.45e-93 284
MS.gene041491.t1 MTR_4g023190 49.610 385 141 15 2 364 4 357 1.89e-92 281
MS.gene041491.t1 MTR_4g023200 48.901 364 136 15 22 364 24 358 1.47e-89 273
MS.gene041491.t1 MTR_4g023130 45.989 374 131 12 1 365 1 312 8.84e-88 267
MS.gene041491.t1 MTR_4g118370 56.485 239 85 3 122 358 33 254 8.53e-85 258
MS.gene041491.t1 MTR_8g013010 52.920 274 111 7 1 267 47 309 2.94e-83 256
MS.gene041491.t1 MTR_4g117870 47.727 308 113 8 64 365 1 266 5.27e-83 253
MS.gene041491.t1 MTR_8g032390 45.013 371 149 13 5 358 37 369 7.38e-83 257
MS.gene041491.t1 MTR_1g055165 45.628 366 137 10 7 366 9 318 1.13e-82 254
MS.gene041491.t1 MTR_4g116330 45.358 377 142 15 2 366 17 341 7.21e-78 243
MS.gene041491.t1 MTR_4g023440 43.836 365 149 12 7 365 17 331 1.16e-76 239
MS.gene041491.t1 MTR_4g121580 44.898 343 141 12 5 331 8 318 7.12e-73 232
MS.gene041491.t1 MTR_8g433030 42.582 364 135 13 5 358 37 336 1.88e-68 219
MS.gene041491.t1 MTR_1g055250 58.794 199 76 4 145 340 49 244 2.53e-68 218
MS.gene041491.t1 MTR_1g055175 59.184 196 74 5 175 366 8 201 1.33e-65 207
MS.gene041491.t1 MTR_7g079370 42.229 341 172 10 37 358 16 350 6.82e-65 210
MS.gene041491.t1 MTR_7g079400 44.631 298 148 8 77 362 43 335 9.19e-65 209
MS.gene041491.t1 MTR_4g118400 39.295 369 138 11 1 358 1 294 3.64e-64 206
MS.gene041491.t1 MTR_2g048580 38.017 363 193 15 1 358 1 336 1.78e-56 188
MS.gene041491.t1 MTR_8g102520 37.538 325 161 11 44 358 24 316 3.59e-51 173
MS.gene041491.t1 MTR_4g116340 45.992 237 94 6 7 233 35 247 2.79e-49 166
MS.gene041491.t1 MTR_4g116320 46.330 218 100 4 150 358 43 252 6.58e-49 166
MS.gene041491.t1 MTR_8g040935 47.867 211 92 8 167 366 5 208 1.05e-46 158
MS.gene041491.t1 MTR_6g463430 48.095 210 89 7 164 365 4 201 4.90e-45 154
MS.gene041491.t1 MTR_4g117530 41.410 227 87 7 142 366 71 253 3.53e-41 145
MS.gene041491.t1 MTR_4g114700 36.434 258 104 6 110 355 9 218 5.65e-38 136
MS.gene041491.t1 MTR_4g117430 47.273 165 65 4 110 267 3 152 2.34e-36 129
MS.gene041491.t1 MTR_7g079420 37.011 281 107 11 109 362 905 1142 4.58e-36 139
MS.gene041491.t1 MTR_4g118360 55.263 114 47 2 255 366 15 126 3.00e-35 125
MS.gene041491.t1 MTR_2g021150 29.491 373 221 18 7 355 13 367 2.36e-32 125
MS.gene041491.t1 MTR_7g117720 43.564 202 77 9 7 197 9 184 6.88e-32 121
MS.gene041491.t1 MTR_7g117720 52.326 86 35 3 279 358 186 271 7.02e-13 68.6
MS.gene041491.t1 MTR_5g069120 44.505 182 79 6 19 184 2 177 2.44e-31 117
MS.gene041491.t1 MTR_4g109290 45.930 172 49 8 1 163 1 137 3.55e-30 114
MS.gene041491.t1 MTR_4g055060 31.494 308 175 12 8 295 30 321 3.73e-30 119
MS.gene041491.t1 MTR_1g054725 28.836 378 216 16 8 355 20 374 6.37e-28 112
MS.gene041491.t1 MTR_5g057790 30.458 371 211 16 8 355 46 392 6.94e-28 113
MS.gene041491.t1 MTR_1g068835 31.494 308 171 13 8 295 4 291 4.42e-27 110
MS.gene041491.t1 MTR_8g098830 39.429 175 100 4 176 347 35 206 8.79e-27 106
MS.gene041491.t1 MTR_5g011200 29.393 313 184 12 3 296 12 306 1.09e-26 109
MS.gene041491.t1 MTR_2g021190 31.014 345 195 17 8 329 21 345 3.04e-26 108
MS.gene041491.t1 MTR_1g068875 28.657 335 194 13 8 318 4 317 5.77e-26 107
MS.gene041491.t1 MTR_2g025420 29.428 367 194 15 8 325 6 356 8.04e-26 107
MS.gene041491.t1 MTR_8g467140 30.795 302 185 12 6 296 30 318 9.40e-26 106
MS.gene041491.t1 MTR_4g061340 27.941 340 204 12 8 326 26 345 1.04e-25 107
MS.gene041491.t1 MTR_3g072470 27.830 424 198 16 11 355 22 416 1.10e-25 107
MS.gene041491.t1 MTR_7g056390 30.488 328 164 12 11 293 21 329 1.88e-25 106
MS.gene041491.t1 MTR_2g021050 32.698 315 151 17 8 295 5 285 5.11e-25 105
MS.gene041491.t1 MTR_6g027910 30.864 324 170 14 11 300 12 315 5.45e-25 104
MS.gene041491.t1 MTR_5g023000 52.083 96 42 2 273 366 6 99 6.34e-25 97.8
MS.gene041491.t1 MTR_4g133170 29.254 335 187 13 8 316 4 314 8.51e-25 104
MS.gene041491.t1 MTR_1g094210 28.809 361 183 17 7 333 56 376 1.38e-24 104
MS.gene041491.t1 MTR_1g068860 31.392 309 172 15 8 295 4 293 2.19e-24 103
MS.gene041491.t1 MTR_1g097490 29.428 367 220 14 5 355 46 389 3.49e-24 102
MS.gene041491.t1 MTR_1g056710 29.773 309 174 11 8 296 34 319 4.11e-24 102
MS.gene041491.t1 MTR_3g007330 31.046 306 167 13 8 295 48 327 4.39e-24 102
MS.gene041491.t1 MTR_2g055970 31.715 309 175 16 5 296 208 497 1.24e-23 102
MS.gene041491.t1 MTR_1g094210 28.684 380 202 18 7 355 56 397 1.25e-23 101
MS.gene041491.t1 MTR_3g036290 31.475 305 169 14 8 300 22 298 1.55e-23 100
MS.gene041491.t1 MTR_7g056003 27.869 366 179 15 11 316 18 358 2.08e-23 100
MS.gene041491.t1 MTR_7g056290 28.806 427 190 20 11 355 25 419 2.14e-23 100
MS.gene041491.t1 MTR_8g101580 28.808 302 187 11 8 296 45 331 2.42e-23 100
MS.gene041491.t1 MTR_3g083010 27.628 409 229 18 8 363 6 400 2.79e-23 100
MS.gene041491.t1 MTR_3g009240 31.293 294 175 11 8 291 36 312 2.80e-23 100
MS.gene041491.t1 MTR_2g029990 27.642 369 226 16 9 355 52 401 4.06e-23 100
MS.gene041491.t1 MTR_7g070880 27.845 413 219 19 8 355 21 419 4.17e-23 100
MS.gene041491.t1 MTR_2g028160 26.735 389 221 15 8 344 5 381 4.18e-23 100
MS.gene041491.t1 MTR_6g013270 28.662 314 194 10 7 304 28 327 7.05e-23 99.0
MS.gene041491.t1 MTR_1g097560 28.571 350 198 16 5 332 33 352 9.20e-23 98.6
MS.gene041491.t1 MTR_3g010390 29.781 319 177 15 8 295 33 335 9.43e-23 99.0
MS.gene041491.t1 MTR_2g028140 28.000 325 181 14 8 291 5 317 9.89e-23 99.0
MS.gene041491.t1 MTR_0667s0010 27.778 360 207 12 8 332 6 347 9.96e-23 99.0
MS.gene041491.t1 MTR_3g007430 29.085 306 183 12 11 300 46 333 1.70e-22 97.8
MS.gene041491.t1 MTR_4g122860 34.759 187 86 6 180 358 156 314 1.96e-22 97.1
MS.gene041491.t1 MTR_4g122860 50.000 92 40 3 1 89 60 148 7.06e-13 69.3
MS.gene041491.t1 MTR_5g046300 29.470 302 169 13 8 291 4 279 2.42e-22 97.1
MS.gene041491.t1 MTR_5g046290 29.470 302 169 13 8 291 4 279 2.42e-22 97.1
MS.gene041491.t1 MTR_4g107820 27.673 318 196 9 8 311 36 333 2.60e-22 97.4
MS.gene041491.t1 MTR_4g107780 27.673 318 196 9 8 311 36 333 2.60e-22 97.4
MS.gene041491.t1 MTR_3g006670 30.820 305 169 14 8 291 49 332 2.61e-22 97.8
MS.gene041491.t1 MTR_4g031770 26.490 302 194 9 8 296 4 290 2.99e-22 97.1
MS.gene041491.t1 MTR_1g115160 28.956 297 187 12 6 296 20 298 3.06e-22 97.1
MS.gene041491.t1 MTR_7g070830 27.989 368 194 16 8 316 21 376 3.21e-22 97.4
MS.gene041491.t1 MTR_7g079450 42.537 134 68 3 229 358 3 131 3.29e-22 91.7
MS.gene041491.t1 MTR_1g114700 28.247 308 184 8 8 296 29 318 3.45e-22 97.1
MS.gene041491.t1 MTR_4g107820 27.673 318 196 9 8 311 36 333 3.86e-22 97.1
MS.gene041491.t1 MTR_3g009310 31.908 304 172 16 8 295 42 326 4.07e-22 97.1
MS.gene041491.t1 MTR_2g078900 30.293 307 171 14 8 296 33 314 4.09e-22 96.3
MS.gene041491.t1 MTR_5g022420 30.897 301 172 16 7 296 26 301 4.51e-22 96.7
MS.gene041491.t1 MTR_4g107780 27.673 318 196 9 8 311 36 333 4.73e-22 97.1
MS.gene041491.t1 MTR_5g007610 31.861 317 166 16 8 295 41 336 4.91e-22 96.7
MS.gene041491.t1 MTR_2g046900 27.019 359 208 15 7 332 27 364 4.98e-22 96.7
MS.gene041491.t1 MTR_0464s0020 28.442 443 194 20 3 355 18 427 8.23e-22 96.3
MS.gene041491.t1 MTR_3g437520 28.680 394 172 16 3 316 18 382 9.23e-22 96.7
MS.gene041491.t1 MTR_2g426090 29.787 329 160 16 11 295 9 310 9.28e-22 96.3
MS.gene041491.t1 MTR_1g097330 28.990 307 176 13 8 296 16 298 9.40e-22 96.3
MS.gene041491.t1 MTR_3g014540 29.085 306 182 14 8 296 29 316 1.06e-21 95.5
MS.gene041491.t1 MTR_5g057710 29.677 310 181 14 8 300 46 335 1.57e-21 95.1
MS.gene041491.t1 MTR_5g057690 28.691 359 223 13 8 355 46 382 2.16e-21 94.7
MS.gene041491.t1 MTR_2g021155 29.431 299 189 10 8 296 36 322 2.32e-21 96.3
MS.gene041491.t1 MTR_2g104340 25.831 391 233 14 8 355 14 390 2.63e-21 94.7
MS.gene041491.t1 MTR_2g028130 26.027 365 217 14 8 332 5 356 3.07e-21 94.7
MS.gene041491.t1 MTR_2g046920 28.197 305 187 12 7 297 23 309 4.17e-21 94.0
MS.gene041491.t1 MTR_2g028110 26.065 399 218 15 8 365 4 366 4.68e-21 93.6
MS.gene041491.t1 MTR_4g030830 26.952 397 228 17 8 355 9 392 5.37e-21 93.6
MS.gene041491.t1 MTR_3g023930 27.642 369 210 13 8 355 34 366 5.77e-21 93.2
MS.gene041491.t1 MTR_2g031720 27.747 364 196 15 7 331 5 340 6.32e-21 93.6
MS.gene041491.t1 MTR_1g055070 27.972 286 163 11 8 262 49 322 7.60e-21 93.2
MS.gene041491.t1 MTR_5g069930 26.437 348 203 16 6 316 4 335 9.10e-21 92.8
MS.gene041491.t1 MTR_7g070440 29.688 320 174 15 7 295 6 305 1.02e-20 92.8
MS.gene041491.t1 MTR_1g055200 54.321 81 35 1 106 184 5 85 1.03e-20 86.7
MS.gene041491.t1 MTR_5g069760 26.608 342 207 13 4 316 2 328 1.16e-20 92.4
MS.gene041491.t1 MTR_6g004660 26.613 372 243 13 7 355 15 379 1.21e-20 92.4
MS.gene041491.t1 MTR_8g046310 26.720 378 226 14 11 358 19 375 1.24e-20 92.4
MS.gene041491.t1 MTR_8g073550 35.263 190 112 6 7 189 29 214 1.25e-20 90.1
MS.gene041491.t1 MTR_3g007410 27.187 320 194 13 11 311 55 354 1.29e-20 92.8
MS.gene041491.t1 MTR_5g057020 30.033 303 182 13 8 304 46 324 1.60e-20 91.7
MS.gene041491.t1 MTR_3g013740 30.721 319 184 16 5 299 41 346 1.69e-20 92.4
MS.gene041491.t1 MTR_2g021210 27.852 298 186 11 8 296 84 361 1.71e-20 92.4
MS.gene041491.t1 MTR_6g065980 29.333 300 163 14 8 291 16 282 1.92e-20 91.7
MS.gene041491.t1 MTR_3g007360 26.667 345 213 14 11 336 55 378 2.57e-20 92.0
MS.gene041491.t1 MTR_2g026010 29.582 311 179 12 8 295 4 297 2.65e-20 91.7
MS.gene041491.t1 MTR_3g083640 29.642 307 172 14 8 296 55 335 3.45e-20 91.7
MS.gene041491.t1 MTR_2g426070 26.875 320 188 11 9 295 7 313 3.51e-20 91.3
MS.gene041491.t1 MTR_2g426060 28.000 325 179 15 8 295 6 312 6.59e-20 90.9
MS.gene041491.t1 MTR_3g024110 28.000 300 183 11 8 296 101 378 7.34e-20 90.9
MS.gene041491.t1 MTR_1g112930 29.605 304 176 14 8 296 25 305 8.94e-20 90.1
MS.gene041491.t1 MTR_1g058190 28.571 308 180 11 8 304 35 313 1.26e-19 89.4
MS.gene041491.t1 MTR_4g024890 30.945 307 180 15 7 291 9 305 1.53e-19 89.4
MS.gene041491.t1 MTR_2g024110 27.508 309 176 15 8 291 4 289 1.68e-19 89.4
MS.gene041491.t1 MTR_7g066000 28.889 315 188 12 5 291 22 328 2.98e-19 88.6
MS.gene041491.t1 MTR_7g445890 25.843 356 190 12 6 316 14 340 3.13e-19 88.6
MS.gene041491.t1 MTR_6g053260 28.526 312 195 12 8 305 337 634 4.14e-19 89.4
MS.gene041491.t1 MTR_7g055987 28.529 333 188 12 11 313 23 335 5.17e-19 87.8
MS.gene041491.t1 MTR_3g010590 26.667 300 182 12 8 296 39 311 5.79e-19 87.8
MS.gene041491.t1 MTR_7g007300 27.778 306 175 12 8 296 103 379 5.99e-19 88.2
MS.gene041491.t1 MTR_2g031640 27.528 356 201 13 8 331 6 336 6.50e-19 87.4
MS.gene041491.t1 MTR_0044s0300 28.758 306 178 12 8 296 38 320 7.98e-19 87.4
MS.gene041491.t1 MTR_4g023430 53.763 93 39 2 2 94 35 123 8.13e-19 84.7
MS.gene041491.t1 MTR_4g023430 44.578 83 39 3 288 365 141 221 4.08e-12 65.5
MS.gene041491.t1 MTR_3g013770 30.968 310 175 16 8 296 33 324 8.36e-19 87.4
MS.gene041491.t1 MTR_3g010920 25.683 366 225 11 8 355 44 380 8.85e-19 87.0
MS.gene041491.t1 MTR_3g436150 31.111 315 167 16 8 291 32 327 1.12e-18 87.0
MS.gene041491.t1 MTR_5g046260 27.645 293 156 13 8 291 4 249 1.36e-18 85.5
MS.gene041491.t1 MTR_2g046830 29.276 304 185 13 7 297 24 310 1.50e-18 86.7
MS.gene041491.t1 MTR_3g096250 28.000 300 151 10 8 296 47 292 1.65e-18 85.9
MS.gene041491.t1 MTR_3g014570 28.155 309 179 13 8 295 29 315 1.72e-18 86.3
MS.gene041491.t1 MTR_2g021252 27.826 345 186 16 11 329 50 357 1.98e-18 86.3
MS.gene041491.t1 MTR_3g007300 30.492 305 160 14 8 303 49 310 2.17e-18 85.9
MS.gene041491.t1 MTR_2g031680 26.687 326 182 14 8 306 6 301 2.19e-18 86.3
MS.gene041491.t1 MTR_4g129190 26.290 407 215 18 8 354 6 387 2.26e-18 85.9
MS.gene041491.t1 MTR_3g030330 28.188 298 185 11 8 296 20 297 2.48e-18 85.9
MS.gene041491.t1 MTR_0760s0010 26.519 362 222 14 13 355 52 388 2.48e-18 85.9
MS.gene041491.t1 MTR_2g024100 28.289 304 164 12 23 291 22 306 2.58e-18 85.9
MS.gene041491.t1 MTR_2g021770 25.871 402 240 17 11 363 15 407 3.03e-18 85.9
MS.gene041491.t1 MTR_7g057270 30.183 328 170 14 8 293 26 336 4.20e-18 85.5
MS.gene041491.t1 MTR_2g425980 28.221 326 178 14 8 295 5 312 4.57e-18 85.5
MS.gene041491.t1 MTR_6g021880 27.957 372 213 19 18 355 30 380 5.40e-18 84.7
MS.gene041491.t1 MTR_7g407070 29.193 322 170 15 8 291 32 333 5.65e-18 85.1
MS.gene041491.t1 MTR_1g115185 26.861 309 197 8 3 296 33 327 5.81e-18 85.1
MS.gene041491.t1 MTR_3g010620 26.174 298 180 9 11 297 39 307 6.84e-18 84.7
MS.gene041491.t1 MTR_4g070550 28.395 324 175 14 8 291 5 311 7.10e-18 84.7
MS.gene041491.t1 MTR_3g030250 25.890 309 175 13 8 296 37 311 7.68e-18 84.3
MS.gene041491.t1 MTR_3g011100 29.180 305 177 13 8 291 235 521 8.26e-18 85.1
MS.gene041491.t1 MTR_3g010520 27.362 307 165 14 8 296 25 291 8.30e-18 84.0
MS.gene041491.t1 MTR_3g006500 27.215 316 184 11 2 296 11 301 1.07e-17 84.0
MS.gene041491.t1 MTR_3g036430 28.428 299 160 11 8 296 20 274 1.17e-17 83.6
MS.gene041491.t1 MTR_1g055375 28.431 306 184 14 11 296 7 297 1.19e-17 83.6
MS.gene041491.t1 MTR_1g055055 28.477 302 172 14 8 297 26 295 1.24e-17 83.2
MS.gene041491.t1 MTR_8g064890 25.831 391 239 20 7 363 15 388 1.29e-17 84.0
MS.gene041491.t1 MTR_2g047832 27.844 334 171 18 7 297 28 334 1.29e-17 84.0
MS.gene041491.t1 MTR_3g011020 28.525 305 176 14 8 296 28 306 1.36e-17 83.6
MS.gene041491.t1 MTR_8g099460 26.899 316 184 12 8 295 5 301 1.54e-17 83.6
MS.gene041491.t1 MTR_2g047200 26.632 383 206 19 6 337 18 376 2.86e-17 82.8
MS.gene041491.t1 MTR_4g019990 27.515 338 194 16 5 306 3 325 3.10e-17 82.8
MS.gene041491.t1 MTR_7g055930 25.571 438 223 20 1 355 6 423 3.23e-17 82.8
MS.gene041491.t1 MTR_6g014720 26.032 315 186 9 7 304 25 309 3.51e-17 82.4
MS.gene041491.t1 MTR_7g066100 27.027 407 225 16 5 358 8 395 3.58e-17 82.4
MS.gene041491.t1 MTR_3g010970 26.421 299 179 10 11 296 51 321 4.24e-17 82.4
MS.gene041491.t1 MTR_7g056170 26.196 439 194 21 1 355 66 458 5.14e-17 82.4
MS.gene041491.t1 MTR_2g078850 29.000 300 181 11 11 296 33 314 6.29e-17 81.6
MS.gene041491.t1 MTR_3g007270 24.419 344 216 8 8 322 47 375 6.83e-17 82.0
MS.gene041491.t1 MTR_1g088120 27.692 325 193 12 6 295 8 325 7.50e-17 81.6
MS.gene041491.t1 MTR_3g024040 27.575 301 184 11 15 305 38 314 8.81e-17 81.3
MS.gene041491.t1 MTR_2g034700 26.627 338 205 13 2 314 8 327 1.02e-16 80.9
MS.gene041491.t1 MTR_2g025960 29.389 262 141 11 103 329 1 253 1.06e-16 80.1
MS.gene041491.t1 MTR_0115s0020 23.724 392 251 14 8 357 10 395 1.09e-16 81.3
MS.gene041491.t1 MTR_6g048120 26.708 322 187 14 8 301 36 336 1.14e-16 81.3
MS.gene041491.t1 MTR_7g062060 25.806 403 230 18 7 355 11 398 1.33e-16 80.9
MS.gene041491.t1 MTR_3g006570 27.152 302 191 13 8 296 21 306 1.55e-16 80.5
MS.gene041491.t1 MTR_4g130330 26.554 354 204 18 4 314 3 343 1.71e-16 80.5
MS.gene041491.t1 MTR_8g062660 26.667 315 187 10 7 296 21 316 1.95e-16 81.3
MS.gene041491.t1 MTR_0064s0160 25.628 398 244 15 8 365 42 427 2.20e-16 80.5
MS.gene041491.t1 MTR_6g090180 25.635 394 217 17 2 338 41 415 2.27e-16 80.5
MS.gene041491.t1 MTR_7g055870 25.508 443 217 19 1 355 6 423 2.35e-16 80.5
MS.gene041491.t1 MTR_4g080200 27.273 308 174 12 6 291 1 280 3.86e-16 79.0
MS.gene041491.t1 MTR_3g010430 26.948 308 186 12 8 296 36 323 4.00e-16 79.7
MS.gene041491.t1 MTR_6g053240 26.300 327 188 12 8 305 28 330 4.05e-16 79.3
MS.gene041491.t1 MTR_7g069550 25.000 368 214 16 5 324 11 364 4.55e-16 79.3
MS.gene041491.t1 MTR_5g072060 25.278 360 218 15 8 335 6 346 4.93e-16 79.7
MS.gene041491.t1 MTR_3g010870 24.917 301 193 10 8 296 37 316 5.10e-16 79.0
MS.gene041491.t1 MTR_7g056760 28.616 318 190 14 6 293 21 331 5.21e-16 79.3
MS.gene041491.t1 MTR_0242s0060 28.144 334 176 12 6 293 7 322 5.28e-16 79.3
MS.gene041491.t1 MTR_0242s0040 28.144 334 176 12 6 293 7 322 5.28e-16 79.3
MS.gene041491.t1 MTR_3g030240 25.000 308 174 12 8 296 40 309 6.77e-16 78.6
MS.gene041491.t1 MTR_6g034720 43.689 103 55 2 145 247 73 172 8.36e-16 75.9
MS.gene041491.t1 MTR_4g055820 26.176 340 198 14 8 303 14 344 1.13e-15 77.8
MS.gene041491.t1 MTR_4g013180 26.913 379 215 18 6 337 9 372 1.31e-15 78.2
MS.gene041491.t1 MTR_6g017280 25.620 363 194 20 6 316 7 345 1.31e-15 77.8
MS.gene041491.t1 MTR_2g047878 24.156 385 220 17 4 355 17 362 1.57e-15 77.4
MS.gene041491.t1 MTR_8g464770 25.330 379 242 19 8 358 12 377 2.08e-15 77.0
MS.gene041491.t1 MTR_5g057643 32.663 199 108 8 8 192 46 232 2.16e-15 75.9
MS.gene041491.t1 MTR_7g028660 28.135 327 177 14 6 295 9 314 2.38e-15 77.0
MS.gene041491.t1 MTR_7g060940 25.432 405 227 16 1 356 15 393 2.61e-15 77.0
MS.gene041491.t1 MTR_7g013590 29.412 306 189 13 11 302 39 331 2.67e-15 77.0
MS.gene041491.t1 MTR_4g037465 26.486 370 213 16 7 334 20 372 3.38e-15 76.6
MS.gene041491.t1 MTR_6g007135 25.949 316 191 11 8 298 26 323 4.23e-15 76.3
MS.gene041491.t1 MTR_5g023570 44.545 110 53 4 7 116 36 137 5.08e-15 72.0
MS.gene041491.t1 MTR_3g024150 26.299 308 177 13 11 296 38 317 5.41e-15 75.9
MS.gene041491.t1 MTR_7g066850 24.339 378 222 17 6 335 21 382 6.75e-15 76.3
MS.gene041491.t1 MTR_7g062100 27.949 390 221 20 8 355 24 395 7.79e-15 75.5
MS.gene041491.t1 MTR_3g009260 29.252 294 172 12 11 291 44 314 8.64e-15 75.5
MS.gene041491.t1 MTR_7g077970 28.399 331 179 15 8 293 7 324 1.16e-14 75.1
MS.gene041491.t1 MTR_1g055145 53.333 75 33 2 209 282 129 202 1.26e-14 73.9
MS.gene041491.t1 MTR_1g055145 52.222 90 38 4 20 108 45 130 2.89e-14 72.8
MS.gene041491.t1 MTR_5g037680 23.678 397 244 17 1 355 1 380 1.51e-14 75.1
MS.gene041491.t1 MTR_4g030760 25.064 391 224 19 5 356 70 430 2.01e-14 74.7
MS.gene041491.t1 MTR_5g048160 27.103 321 192 15 8 291 4 319 2.03e-14 74.3
MS.gene041491.t1 MTR_6g055210 27.879 330 171 14 7 290 21 329 2.27e-14 74.3
MS.gene041491.t1 MTR_4g028750 26.257 358 207 16 2 316 10 353 2.35e-14 74.3
MS.gene041491.t1 MTR_3g013950 25.250 400 240 16 5 360 4 388 2.52e-14 73.9
MS.gene041491.t1 MTR_0267s0050 25.945 397 239 17 5 360 4 386 2.89e-14 73.9
MS.gene041491.t1 MTR_2g078870 29.379 177 105 5 123 296 78 237 3.04e-14 73.2
MS.gene041491.t1 MTR_7g055977 27.720 386 197 20 6 337 5 362 3.21e-14 73.6
MS.gene041491.t1 MTR_0649s0020 24.682 393 234 16 8 355 11 386 3.26e-14 73.6
MS.gene041491.t1 MTR_7g061060 26.997 363 185 18 5 316 10 343 3.33e-14 73.6
MS.gene041491.t1 MTR_7g091630 26.284 331 186 15 4 293 28 341 4.16e-14 73.6
MS.gene041491.t1 MTR_7g067680 26.861 309 165 15 8 296 49 316 4.39e-14 73.2
MS.gene041491.t1 MTR_3g464470 24.084 382 211 14 3 331 2 357 6.48e-14 72.8
MS.gene041491.t1 MTR_6g016285 24.396 414 233 16 6 355 19 416 6.71e-14 73.2
MS.gene041491.t1 MTR_0054s0090 22.670 397 251 17 7 357 16 402 7.39e-14 72.8
MS.gene041491.t1 MTR_2g031700 27.160 243 141 9 8 236 6 226 7.90e-14 71.6
MS.gene041491.t1 MTR_7g091640 27.964 329 179 16 4 293 31 340 8.06e-14 72.4
MS.gene041491.t1 MTR_7g078860 27.829 327 192 11 1 293 1 317 8.08e-14 72.4
MS.gene041491.t1 MTR_3g036335 26.710 307 177 13 8 291 41 322 1.08e-13 72.0
MS.gene041491.t1 MTR_7g022600 26.786 336 184 14 5 291 20 342 1.22e-13 72.0
MS.gene041491.t1 MTR_1g050542 23.569 297 191 11 7 290 57 330 1.24e-13 72.0
MS.gene041491.t1 MTR_2g046800 26.946 334 186 16 5 296 11 328 1.39e-13 71.6
MS.gene041491.t1 MTR_2g437110 26.158 367 219 17 6 335 20 371 1.42e-13 72.0
MS.gene041491.t1 MTR_3g023940 25.566 309 189 12 8 296 34 321 1.52e-13 71.6
MS.gene041491.t1 MTR_7g066010 24.934 377 197 15 4 336 17 351 1.66e-13 71.2
MS.gene041491.t1 MTR_5g056020 25.178 421 236 19 2 355 11 419 1.72e-13 72.0
MS.gene041491.t1 MTR_7g056260 28.012 332 165 17 6 293 12 313 1.84e-13 70.9
MS.gene041491.t1 MTR_6g017270 30.348 201 116 10 6 188 7 201 1.87e-13 70.9
MS.gene041491.t1 MTR_0097s0030 25.946 370 204 15 4 331 10 351 2.00e-13 71.2
MS.gene041491.t1 MTR_2g047240 25.946 370 204 15 4 331 10 351 2.00e-13 71.2
MS.gene041491.t1 MTR_5g069390 24.818 411 235 22 8 363 26 417 2.10e-13 71.6
MS.gene041491.t1 MTR_3g058480 32.692 208 108 10 8 190 39 239 2.96e-13 70.5
MS.gene041491.t1 MTR_5g008530 63.934 61 19 2 5 65 15 72 3.08e-13 64.7
MS.gene041491.t1 MTR_8g063440 24.346 382 245 16 5 355 9 377 3.46e-13 70.5
MS.gene041491.t1 MTR_3g030350 28.296 311 163 16 8 291 35 312 3.50e-13 70.5
MS.gene041491.t1 MTR_3g058470 26.239 343 178 15 8 321 37 333 3.62e-13 70.5
MS.gene041491.t1 MTR_2g021950 25.779 353 194 17 11 314 19 352 3.69e-13 70.5
MS.gene041491.t1 MTR_2g047892 26.444 329 172 14 6 291 20 321 3.80e-13 70.5
MS.gene041491.t1 MTR_3g011120 24.363 353 200 14 2 314 8 333 3.82e-13 70.5
MS.gene041491.t1 MTR_5g043160 26.975 367 192 18 10 312 52 406 3.91e-13 70.9
MS.gene041491.t1 MTR_3g058440 29.694 229 138 9 8 222 35 254 5.04e-13 69.3
MS.gene041491.t1 MTR_7g079640 24.339 378 202 17 8 338 13 353 5.37e-13 70.1
MS.gene041491.t1 MTR_1g071010 23.514 387 251 15 3 355 10 385 5.98e-13 69.7
MS.gene041491.t1 MTR_7g078040 28.655 342 173 13 8 293 9 335 6.74e-13 69.7
MS.gene041491.t1 MTR_5g046280 28.061 196 113 8 108 291 3 182 8.13e-13 68.2
MS.gene041491.t1 MTR_7g066030 24.427 393 219 14 1 337 14 384 8.20e-13 69.3
MS.gene041491.t1 MTR_7g052670 24.455 413 241 17 6 355 19 423 8.35e-13 69.7
MS.gene041491.t1 MTR_0831s0010 24.938 401 223 18 3 355 45 415 8.86e-13 69.3
MS.gene041491.t1 MTR_7g017170 25.532 329 190 17 8 295 18 332 1.07e-12 69.3
MS.gene041491.t1 MTR_7g017130 25.610 328 191 16 8 295 18 332 1.07e-12 68.9
MS.gene041491.t1 MTR_3g464500 24.282 383 212 15 3 331 22 380 1.21e-12 68.9
MS.gene041491.t1 MTR_7g056200 23.647 351 193 11 6 316 21 336 1.30e-12 68.9
MS.gene041491.t1 MTR_7g056570 25.210 357 191 16 7 316 17 344 1.34e-12 68.9
MS.gene041491.t1 MTR_7g050480 26.923 338 182 12 1 302 15 323 1.91e-12 68.2
MS.gene041491.t1 MTR_5g057040 31.000 200 110 10 8 192 46 232 1.98e-12 68.9
MS.gene041491.t1 MTR_3g010440 34.586 133 79 4 8 136 26 154 2.07e-12 67.8
MS.gene041491.t1 MTR_6g004210 25.076 327 201 13 19 310 36 353 2.10e-12 68.2
MS.gene041491.t1 MTR_3g006640 25.764 229 134 6 107 311 20 236 2.16e-12 67.4
MS.gene041491.t1 MTR_3g009300 25.070 359 200 16 11 344 37 351 2.24e-12 67.8
MS.gene041491.t1 MTR_6g042600 37.342 158 66 6 11 160 39 171 2.99e-12 67.8
MS.gene041491.t1 MTR_7g016930 25.157 318 183 15 5 292 13 305 3.26e-12 67.4
MS.gene041491.t1 MTR_1g054575 25.574 305 187 14 8 296 52 332 3.74e-12 68.2
MS.gene041491.t1 MTR_4g024870 28.632 234 143 10 9 228 45 268 4.19e-12 67.4
MS.gene041491.t1 MTR_4g013185 25.970 335 192 14 7 293 9 335 5.30e-12 67.0
MS.gene041491.t1 MTR_1g015730 27.077 325 170 15 7 293 8 303 6.33e-12 66.6
MS.gene041491.t1 MTR_7g078840 26.957 345 194 13 1 293 3 341 6.69e-12 67.0
MS.gene041491.t1 MTR_7g035295 24.566 403 213 16 6 355 14 378 7.42e-12 66.6
MS.gene041491.t1 MTR_7g061050 25.625 320 183 13 5 291 10 307 8.91e-12 66.2
MS.gene041491.t1 MTR_2g064950 24.031 387 217 14 8 342 10 371 9.47e-12 66.2
MS.gene041491.t1 MTR_0627s0010 24.495 396 224 19 8 343 38 418 2.09e-11 65.1
MS.gene041491.t1 MTR_3g096280 25.914 301 168 12 20 302 17 280 2.23e-11 64.7
MS.gene041491.t1 MTR_2g010950 23.797 395 243 15 8 355 20 403 2.59e-11 65.1
MS.gene041491.t1 MTR_6g017305 25.532 235 128 11 120 316 14 239 3.41e-11 63.5
MS.gene041491.t1 MTR_7g050520 26.822 343 176 13 1 302 15 323 3.48e-11 64.3
MS.gene041491.t1 MTR_0134s0060 24.573 293 165 12 7 250 11 296 3.69e-11 64.3
MS.gene041491.t1 MTR_4g011660 23.659 410 245 15 5 355 16 416 4.37e-11 64.3
MS.gene041491.t1 MTR_7g061010 27.660 329 170 15 3 293 17 315 4.88e-11 63.9
MS.gene041491.t1 MTR_5g027370 21.884 361 234 13 12 345 33 372 5.13e-11 64.3
MS.gene041491.t1 MTR_5g027330 21.884 361 234 13 12 345 44 383 5.16e-11 64.3
MS.gene041491.t1 MTR_5g096710 27.564 312 190 13 5 291 20 320 7.38e-11 63.5
MS.gene041491.t1 MTR_1g442850 30.693 202 105 8 7 187 4 191 8.65e-11 63.2
MS.gene041491.t1 MTR_7g050490 31.754 211 95 9 1 187 1 186 8.88e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041491.t1 AT3G23880 32.249 369 213 16 3 349 5 358 1.31e-31 122
MS.gene041491.t1 AT3G06240 28.070 399 226 17 5 355 33 418 3.62e-23 100
MS.gene041491.t1 AT4G22390 25.575 348 218 13 9 333 5 334 1.32e-18 87.0
MS.gene041491.t1 AT4G22390 25.575 348 218 13 9 333 5 334 1.45e-18 86.7
MS.gene041491.t1 AT4G12560 28.296 311 189 15 8 295 4 303 4.45e-18 85.5
MS.gene041491.t1 AT4G12560 28.296 311 189 15 8 295 4 303 4.45e-18 85.5
MS.gene041491.t1 AT4G12560 28.296 311 189 15 8 295 4 303 4.45e-18 85.5
MS.gene041491.t1 AT1G30790 26.984 315 194 12 8 298 9 311 4.10e-16 79.3
MS.gene041491.t1 AT1G33530 26.351 296 192 12 3 292 92 367 1.34e-15 78.2
MS.gene041491.t1 AT5G49610 27.795 331 181 14 7 309 8 308 1.41e-13 71.6
MS.gene041491.t1 AT3G52320 25.291 344 225 11 8 340 27 349 2.51e-13 71.2
MS.gene041491.t1 AT1G47790 24.561 285 196 8 8 287 25 295 3.75e-12 67.4
MS.gene041491.t1 AT3G17530 23.103 290 194 10 8 282 6 281 4.91e-12 67.0
MS.gene041491.t1 AT3G10430 33.333 159 89 6 8 159 5 153 5.13e-12 67.0
MS.gene041491.t1 AT2G40910 23.323 313 199 11 8 295 62 358 1.75e-11 65.5
MS.gene041491.t1 AT2G40910 23.323 313 199 11 8 295 69 365 2.07e-11 65.5
MS.gene041491.t1 AT4G19940 23.836 365 229 13 8 340 35 382 4.68e-11 64.3

Find 81 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTACACATTGTGGTTTA+TGG 0.100871 8.2:+11544574 MS.gene041491:CDS
TATTTAGATCTTAGAATTAA+AGG 0.165690 8.2:+11544117 MS.gene041491:CDS
TATAAACATTTCTATGGTTT+TGG 0.167038 8.2:+11544240 MS.gene041491:CDS
AAACTCTGGGTTTGGATTAA+AGG 0.169325 8.2:-11544427 None:intergenic
CAAAATGTGAATTTGCAAAT+TGG 0.228313 8.2:-11543948 None:intergenic
AATTCATATAAACATTTCTA+TGG 0.273345 8.2:+11544234 MS.gene041491:CDS
TTAGAGGATTTCTCAGTCTA+TGG 0.277856 8.2:+11544601 MS.gene041491:CDS
ATAGAAATGTTTATATGAAT+TGG 0.289524 8.2:-11544232 None:intergenic
GTAGTAACAGATGGTTCTTA+TGG 0.310999 8.2:+11544762 MS.gene041491:CDS
ATTCTACGAGTGTGGGTTGC+GGG 0.312270 8.2:-11543979 None:intergenic
TTCTACACATTGTGGTTTAT+GGG 0.314260 8.2:+11544575 MS.gene041491:CDS
TATTGTTGCATTTCATTTAA+CGG 0.314412 8.2:+11544506 MS.gene041491:CDS
GATATGATGCAATTGATATA+TGG 0.320951 8.2:+11544631 MS.gene041491:CDS
GAAGATGCAATTCTATAAAA+AGG 0.321162 8.2:-11544405 None:intergenic
TTGAAGAGAAACTCTGGGTT+TGG 0.338871 8.2:-11544435 None:intergenic
AGATGCACTTGTATTTCTAT+TGG 0.341222 8.2:+11544839 MS.gene041491:CDS
GAATCATAGTCAACATCAAC+TGG 0.373741 8.2:-11544555 None:intergenic
GATGGCACACCATTTGAGTT+TGG 0.374593 8.2:-11544318 None:intergenic
TGTGGTTTATGGGTATTTAG+AGG 0.378055 8.2:+11544585 MS.gene041491:CDS
TTCTAAGATCTAAATAAGAT+AGG 0.391677 8.2:-11544110 None:intergenic
TGCTCGTTGTCACCAGGAAC+AGG 0.396247 8.2:-11544891 None:intergenic
TAGTAACAGATGGTTCTTAT+GGG 0.404168 8.2:+11544763 MS.gene041491:CDS
ATGAAGTCGGTGGGACCAAC+AGG 0.407414 8.2:-11544705 None:intergenic
TTAAATGTGTTTGTAAGTCT+TGG 0.408309 8.2:+11543902 MS.gene041491:CDS
CTCATATCAAATTCACATCT+TGG 0.429715 8.2:+11544006 MS.gene041491:CDS
CAATGATGCTATTCACTGGT+TGG 0.435650 8.2:+11544455 MS.gene041491:CDS
TCTAAGATCTAAATAAGATA+GGG 0.439443 8.2:-11544109 None:intergenic
AAAATGAAGGTTTGGTGAAA+CGG 0.445079 8.2:-11544079 None:intergenic
CCACTCTTTGTACAACATAC+AGG 0.447432 8.2:-11544732 None:intergenic
AAGACTCTTGTTCTTCCTGT+TGG 0.456705 8.2:+11544690 MS.gene041491:CDS
CCACTCAACAGATGATTACT+TGG 0.457447 8.2:+11544269 MS.gene041491:CDS
GCATCATTGAAGAGAAACTC+TGG 0.469803 8.2:-11544441 None:intergenic
TACAAGTGCATCTTTACAAA+AGG 0.470897 8.2:-11544829 None:intergenic
AATACAAAGTACATTCATCT+TGG 0.473647 8.2:+11544664 MS.gene041491:CDS
GATCGAATTCCAAACTCAAA+TGG 0.474811 8.2:+11544309 MS.gene041491:CDS
TCTTCAATGATGCTATTCAC+TGG 0.487695 8.2:+11544451 MS.gene041491:CDS
TAGAGGATTTCTCAGTCTAT+GGG 0.489737 8.2:+11544602 MS.gene041491:CDS
AAAGGCAAATGGGTAGTACT+TGG 0.490111 8.2:-11544387 None:intergenic
ATATGATGCAATTGATATAT+GGG 0.495926 8.2:+11544632 MS.gene041491:CDS
TTGCATTTCATTTAACGGAA+AGG 0.496118 8.2:+11544511 MS.gene041491:CDS
AATTCTACGAGTGTGGGTTG+CGG 0.497867 8.2:-11543980 None:intergenic
GTGCTTCAAGCCTCTACCTA+TGG 0.501610 8.2:+11544169 MS.gene041491:CDS
AACAGATGGTTCTTATGGGT+TGG 0.505722 8.2:+11544767 MS.gene041491:CDS
CTCAACAGATGATTACTTGG+TGG 0.509364 8.2:+11544272 MS.gene041491:CDS
AAACGTATTAGACACTTCAC+TGG 0.512661 8.2:-11543880 None:intergenic
GAATTAAAGGTTCATGTAGA+GGG 0.513006 8.2:+11544130 MS.gene041491:CDS
TAACCTTGCTCGTTGTCACC+AGG 0.523641 8.2:-11544897 None:intergenic
TGATAGTTCAAATTCTTCAA+AGG 0.527829 8.2:+11543854 MS.gene041491:CDS
CTAAGATCTAAATAAGATAG+GGG 0.529748 8.2:-11544108 None:intergenic
AGGTATTTGTTTGTGAACTC+CGG 0.539638 8.2:-11544202 None:intergenic
AGAATTAAAGGTTCATGTAG+AGG 0.542009 8.2:+11544129 MS.gene041491:CDS
CACTCTTTGTACAACATACA+GGG 0.563133 8.2:-11544731 None:intergenic
TGCAATTGATATATGGGTGA+TGG 0.565148 8.2:+11544638 MS.gene041491:CDS
ATTGAGAGCTAATGCATGGA+AGG 0.571771 8.2:+11544359 MS.gene041491:CDS
TAGTCAACATCAACTGGGAG+AGG 0.571901 8.2:-11544549 None:intergenic
TTCTACGAGTGTGGGTTGCG+GGG 0.574394 8.2:-11543978 None:intergenic
GGTGATATTGTAGTAACAGA+TGG 0.575324 8.2:+11544753 MS.gene041491:CDS
TGTTTGTGAACTCCGGTGGA+TGG 0.577672 8.2:-11544195 None:intergenic
GAGAAAAGCCACAAGTGAGA+TGG 0.578737 8.2:-11544336 None:intergenic
TGGATGGATTCCATAGGTAG+AGG 0.580952 8.2:-11544179 None:intergenic
GACTATGATTCTACACATTG+TGG 0.583006 8.2:+11544567 MS.gene041491:CDS
CATCATTGAAGAGAAACTCT+GGG 0.584497 8.2:-11544440 None:intergenic
TCTCATTGAGAGCTAATGCA+TGG 0.591835 8.2:+11544355 MS.gene041491:CDS
TACCTATGGAATCCATCCAC+CGG 0.594761 8.2:+11544183 MS.gene041491:CDS
TGAGTGCAATTCTACGAGTG+TGG 0.605167 8.2:-11543987 None:intergenic
ATTTGAACTATCAATTCATG+AGG 0.614523 8.2:-11543844 None:intergenic
GTTCCTGGTGACAACGAGCA+AGG 0.617466 8.2:+11544894 MS.gene041491:CDS
ATGGTGTGCCATCTCACTTG+TGG 0.629802 8.2:+11544328 MS.gene041491:CDS
CCTGTATGTTGTACAAAGAG+TGG 0.630075 8.2:+11544732 MS.gene041491:CDS
TACAGGGAAAATGAAGTCGG+TGG 0.632059 8.2:-11544715 None:intergenic
GCTCGTTGTCACCAGGAACA+GGG 0.633306 8.2:-11544890 None:intergenic
TTGGTGAAATATAACAACAA+AGG 0.638031 8.2:+11544786 MS.gene041491:CDS
TATTTGTTTGTGAACTCCGG+TGG 0.640963 8.2:-11544199 None:intergenic
TAAGATCTAAATAAGATAGG+GGG 0.644182 8.2:-11544107 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.645443 8.2:-11544185 None:intergenic
ACAGGGAAAATGAAGTCGGT+GGG 0.646954 8.2:-11544714 None:intergenic
CCAAGTAATCATCTGTTGAG+TGG 0.662857 8.2:-11544269 None:intergenic
ACATACAGGGAAAATGAAGT+CGG 0.663561 8.2:-11544718 None:intergenic
GAGTGCAATTCTACGAGTGT+GGG 0.664592 8.2:-11543986 None:intergenic
TTATATGAATTGGAACACAA+AGG 0.673687 8.2:-11544222 None:intergenic
AATCATAGTCAACATCAACT+GGG 0.686130 8.2:-11544554 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCATATAAACATTTCTA+TGG + chr8.2:11544234-11544253 MS.gene041491:CDS 15.0%
!! ATAGAAATGTTTATATGAAT+TGG - chr8.2:11544235-11544254 None:intergenic 15.0%
!! TATTTAGATCTTAGAATTAA+AGG + chr8.2:11544117-11544136 MS.gene041491:CDS 15.0%
!! AATTCTATAAAAAGGCAAAT+GGG - chr8.2:11544400-11544419 None:intergenic 20.0%
!! ATATGATGCAATTGATATAT+GGG + chr8.2:11544632-11544651 MS.gene041491:CDS 20.0%
!! TATTGTTGCATTTCATTTAA+CGG + chr8.2:11544506-11544525 MS.gene041491:CDS 20.0%
!!! ATAAACATTTCTATGGTTTT+GGG + chr8.2:11544241-11544260 MS.gene041491:CDS 20.0%
!!! TATAAACATTTCTATGGTTT+TGG + chr8.2:11544240-11544259 MS.gene041491:CDS 20.0%
!!! TCTAAGATCTAAATAAGATA+GGG - chr8.2:11544112-11544131 None:intergenic 20.0%
!!! TTCTAAGATCTAAATAAGAT+AGG - chr8.2:11544113-11544132 None:intergenic 20.0%
! AATACAAAGTACATTCATCT+TGG + chr8.2:11544664-11544683 MS.gene041491:CDS 25.0%
! ATTTGAACTATCAATTCATG+AGG - chr8.2:11543847-11543866 None:intergenic 25.0%
! CAAAATGTGAATTTGCAAAT+TGG - chr8.2:11543951-11543970 None:intergenic 25.0%
! CAATTCTATAAAAAGGCAAA+TGG - chr8.2:11544401-11544420 None:intergenic 25.0%
! CTAAGATCTAAATAAGATAG+GGG - chr8.2:11544111-11544130 None:intergenic 25.0%
! GAAGATGCAATTCTATAAAA+AGG - chr8.2:11544408-11544427 None:intergenic 25.0%
! GATATGATGCAATTGATATA+TGG + chr8.2:11544631-11544650 MS.gene041491:CDS 25.0%
! TAAGATCTAAATAAGATAGG+GGG - chr8.2:11544110-11544129 None:intergenic 25.0%
! TGATAGTTCAAATTCTTCAA+AGG + chr8.2:11543854-11543873 MS.gene041491:CDS 25.0%
! TTAAATGTGTTTGTAAGTCT+TGG + chr8.2:11543902-11543921 MS.gene041491:CDS 25.0%
! TTATATGAATTGGAACACAA+AGG - chr8.2:11544225-11544244 None:intergenic 25.0%
! TTGGTGAAATATAACAACAA+AGG + chr8.2:11544786-11544805 MS.gene041491:CDS 25.0%
AATCATAGTCAACATCAACT+GGG - chr8.2:11544557-11544576 None:intergenic 30.0%
AGAATTAAAGGTTCATGTAG+AGG + chr8.2:11544129-11544148 MS.gene041491:CDS 30.0%
ATTCTACACATTGTGGTTTA+TGG + chr8.2:11544574-11544593 MS.gene041491:CDS 30.0%
CTCATATCAAATTCACATCT+TGG + chr8.2:11544006-11544025 MS.gene041491:CDS 30.0%
GAATTAAAGGTTCATGTAGA+GGG + chr8.2:11544130-11544149 MS.gene041491:CDS 30.0%
TACAAGTGCATCTTTACAAA+AGG - chr8.2:11544832-11544851 None:intergenic 30.0%
TAGTAACAGATGGTTCTTAT+GGG + chr8.2:11544763-11544782 MS.gene041491:CDS 30.0%
TTCTACACATTGTGGTTTAT+GGG + chr8.2:11544575-11544594 MS.gene041491:CDS 30.0%
TTGCATTTCATTTAACGGAA+AGG + chr8.2:11544511-11544530 MS.gene041491:CDS 30.0%
! AGATGCACTTGTATTTCTAT+TGG + chr8.2:11544839-11544858 MS.gene041491:CDS 30.0%
!! AAAATGAAGGTTTGGTGAAA+CGG - chr8.2:11544082-11544101 None:intergenic 30.0%
AAACGTATTAGACACTTCAC+TGG - chr8.2:11543883-11543902 None:intergenic 35.0%
AAACTCTGGGTTTGGATTAA+AGG - chr8.2:11544430-11544449 None:intergenic 35.0%
ACATACAGGGAAAATGAAGT+CGG - chr8.2:11544721-11544740 None:intergenic 35.0%
AGGTATTTGTTTGTGAACTC+CGG - chr8.2:11544205-11544224 None:intergenic 35.0%
CACTCTTTGTACAACATACA+GGG - chr8.2:11544734-11544753 None:intergenic 35.0%
CATCATTGAAGAGAAACTCT+GGG - chr8.2:11544443-11544462 None:intergenic 35.0%
GAATCATAGTCAACATCAAC+TGG - chr8.2:11544558-11544577 None:intergenic 35.0%
GACTATGATTCTACACATTG+TGG + chr8.2:11544567-11544586 MS.gene041491:CDS 35.0%
GATCGAATTCCAAACTCAAA+TGG + chr8.2:11544309-11544328 MS.gene041491:CDS 35.0%
GGTGATATTGTAGTAACAGA+TGG + chr8.2:11544753-11544772 MS.gene041491:CDS 35.0%
GTAGTAACAGATGGTTCTTA+TGG + chr8.2:11544762-11544781 MS.gene041491:CDS 35.0%
TAGAGGATTTCTCAGTCTAT+GGG + chr8.2:11544602-11544621 MS.gene041491:CDS 35.0%
TCTTCAATGATGCTATTCAC+TGG + chr8.2:11544451-11544470 MS.gene041491:CDS 35.0%
TGCAATTGATATATGGGTGA+TGG + chr8.2:11544638-11544657 MS.gene041491:CDS 35.0%
TGTGGTTTATGGGTATTTAG+AGG + chr8.2:11544585-11544604 MS.gene041491:CDS 35.0%
TTAGAGGATTTCTCAGTCTA+TGG + chr8.2:11544601-11544620 MS.gene041491:CDS 35.0%
AAAGGCAAATGGGTAGTACT+TGG - chr8.2:11544390-11544409 None:intergenic 40.0%
AACAGATGGTTCTTATGGGT+TGG + chr8.2:11544767-11544786 MS.gene041491:CDS 40.0%
AAGACTCTTGTTCTTCCTGT+TGG + chr8.2:11544690-11544709 MS.gene041491:CDS 40.0%
ATAGGGGGCTCAAAAAATGA+AGG - chr8.2:11544095-11544114 None:intergenic 40.0%
ATTGAGAGCTAATGCATGGA+AGG + chr8.2:11544359-11544378 MS.gene041491:CDS 40.0%
CAATGATGCTATTCACTGGT+TGG + chr8.2:11544455-11544474 MS.gene041491:CDS 40.0%
CCAAGTAATCATCTGTTGAG+TGG - chr8.2:11544272-11544291 None:intergenic 40.0%
CCACTCAACAGATGATTACT+TGG + chr8.2:11544269-11544288 MS.gene041491:CDS 40.0%
CCACTCTTTGTACAACATAC+AGG - chr8.2:11544735-11544754 None:intergenic 40.0%
CCTGTATGTTGTACAAAGAG+TGG + chr8.2:11544732-11544751 MS.gene041491:CDS 40.0%
CTCAACAGATGATTACTTGG+TGG + chr8.2:11544272-11544291 MS.gene041491:CDS 40.0%
GCATCATTGAAGAGAAACTC+TGG - chr8.2:11544444-11544463 None:intergenic 40.0%
GGGCTCAAAAAATGAAGGTT+TGG - chr8.2:11544090-11544109 None:intergenic 40.0%
TATTTGTTTGTGAACTCCGG+TGG - chr8.2:11544202-11544221 None:intergenic 40.0%
TCTCATTGAGAGCTAATGCA+TGG + chr8.2:11544355-11544374 MS.gene041491:CDS 40.0%
TTGAAGAGAAACTCTGGGTT+TGG - chr8.2:11544438-11544457 None:intergenic 40.0%
ACAGGGAAAATGAAGTCGGT+GGG - chr8.2:11544717-11544736 None:intergenic 45.0%
GAGAAAAGCCACAAGTGAGA+TGG - chr8.2:11544339-11544358 None:intergenic 45.0%
GAGTGCAATTCTACGAGTGT+GGG - chr8.2:11543989-11544008 None:intergenic 45.0%
TACAGGGAAAATGAAGTCGG+TGG - chr8.2:11544718-11544737 None:intergenic 45.0%
TACCTATGGAATCCATCCAC+CGG + chr8.2:11544183-11544202 MS.gene041491:CDS 45.0%
TAGTCAACATCAACTGGGAG+AGG - chr8.2:11544552-11544571 None:intergenic 45.0%
TGAGTGCAATTCTACGAGTG+TGG - chr8.2:11543990-11544009 None:intergenic 45.0%
! AATTCTACGAGTGTGGGTTG+CGG - chr8.2:11543983-11544002 None:intergenic 45.0%
! GATGGCACACCATTTGAGTT+TGG - chr8.2:11544321-11544340 None:intergenic 45.0%
! TGGATGGATTCCATAGGTAG+AGG - chr8.2:11544182-11544201 None:intergenic 45.0%
!!! GTTGGCTTTTCGTCATGGTA+TGG + chr8.2:11544473-11544492 MS.gene041491:CDS 45.0%
ATGGTGTGCCATCTCACTTG+TGG + chr8.2:11544328-11544347 MS.gene041491:CDS 50.0%
GTGCTTCAAGCCTCTACCTA+TGG + chr8.2:11544169-11544188 MS.gene041491:CDS 50.0%
TAACCTTGCTCGTTGTCACC+AGG - chr8.2:11544900-11544919 None:intergenic 50.0%
TGTTTGTGAACTCCGGTGGA+TGG - chr8.2:11544198-11544217 None:intergenic 50.0%
! ATTCTACGAGTGTGGGTTGC+GGG - chr8.2:11543982-11544001 None:intergenic 50.0%
!! CTGCTTTTACTCCCTGTTCC+TGG + chr8.2:11544879-11544898 MS.gene041491:CDS 50.0%
!!! CACTGGTTGGCTTTTCGTCA+TGG + chr8.2:11544468-11544487 MS.gene041491:CDS 50.0%
ATGAAGTCGGTGGGACCAAC+AGG - chr8.2:11544708-11544727 None:intergenic 55.0%
GCTCGTTGTCACCAGGAACA+GGG - chr8.2:11544893-11544912 None:intergenic 55.0%
GTTCCTGGTGACAACGAGCA+AGG + chr8.2:11544894-11544913 MS.gene041491:CDS 55.0%
TGCTCGTTGTCACCAGGAAC+AGG - chr8.2:11544894-11544913 None:intergenic 55.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr8.2:11544188-11544207 None:intergenic 55.0%
! TTCTACGAGTGTGGGTTGCG+GGG - chr8.2:11543981-11544000 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 11543820 11544920 11543820 ID=MS.gene041491
chr8.2 mRNA 11543820 11544920 11543820 ID=MS.gene041491.t1;Parent=MS.gene041491
chr8.2 exon 11543820 11544920 11543820 ID=MS.gene041491.t1.exon1;Parent=MS.gene041491.t1
chr8.2 CDS 11543820 11544920 11543820 ID=cds.MS.gene041491.t1;Parent=MS.gene041491.t1
Gene Sequence

>MS.gene041491

ATGGAGACGAATTCAATGTTTCTTCCTCATGAATTGATAGTTCAAATTCTTCAAAGGTTACCAGTGAAGTGTCTAATACGTTTTAAATGTGTTTGTAAGTCTTGGTTTTCTCTTATTTCTCATGATCTCCAATTTGCAAATTCACATTTTGAAATTAACCCCGCAACCCACACTCGTAGAATTGCACTCATATCAAATTCACATCTTGGAACTCGATCTTTCAACATAGAAGCATCACTTAACGATGATTCTGCTGTTTCCGTTTCACCAAACCTTCATTTTTTGAGCCCCCTATCTTATTTAGATCTTAGAATTAAAGGTTCATGTAGAGGGTTTATATTGTTGCATTGTGCTTCAAGCCTCTACCTATGGAATCCATCCACCGGAGTTCACAAACAAATACCTTTGTGTTCCAATTCATATAAACATTTCTATGGTTTTGGGTATGACCACTCAACAGATGATTACTTGGTGGTTTCATTGTGCAATGATCGAATTCCAAACTCAAATGGTGTGCCATCTCACTTGTGGCTTTTCTCATTGAGAGCTAATGCATGGAAGGAATTTCCAAGTACTACCCATTTGCCTTTTTATAGAATTGCATCTTCCTTTAATCCAAACCCAGAGTTTCTCTTCAATGATGCTATTCACTGGTTGGCTTTTCGTCATGGTATGGATGTCTTTGTTATTGTTGCATTTCATTTAACGGAAAGGAAACTTATAGAGATTCCTCTCCCAGTTGATGTTGACTATGATTCTACACATTGTGGTTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTTGAGATATGATGCAATTGATATATGGGTGATGGAAGAATACAAAGTACATTCATCTTGGACTAAGACTCTTGTTCTTCCTGTTGGTCCCACCGACTTCATTTTCCCTGTATGTTGTACAAAGAGTGGTGATATTGTAGTAACAGATGGTTCTTATGGGTTGGTGAAATATAACAACAAAGGAGAGTTTCTAGAGCGTAACTCCTTTTGTAAAGATGCACTTGTATTTCTATTGGCTATGTATACAGAGTCTCTGCTTTTACTCCCTGTTCCTGGTGACAACGAGCAAGGTTAA

Protein sequence

>MS.gene041491.t1

METNSMFLPHELIVQILQRLPVKCLIRFKCVCKSWFSLISHDLQFANSHFEINPATHTRRIALISNSHLGTRSFNIEASLNDDSAVSVSPNLHFLSPLSYLDLRIKGSCRGFILLHCASSLYLWNPSTGVHKQIPLCSNSYKHFYGFGYDHSTDDYLVVSLCNDRIPNSNGVPSHLWLFSLRANAWKEFPSTTHLPFYRIASSFNPNPEFLFNDAIHWLAFRHGMDVFVIVAFHLTERKLIEIPLPVDVDYDSTHCGLWVFRGFLSLWVLRYDAIDIWVMEEYKVHSSWTKTLVLPVGPTDFIFPVCCTKSGDIVVTDGSYGLVKYNNKGEFLERNSFCKDALVFLLAMYTESLLLLPVPGDNEQG