AlfalfaGEDB | MS.gene045475

M. sativa cultivar XinJiangDaYe / MS.gene045475

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045475.t1	RHN61877.1	96	350	14	0	1	350	24	373	9.50E-204	719.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045475.t1	Q9LU24	28.9	246	134	11	3	235	5	222	6.8e-17	89.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045475.t1	G7JCN7	96.0	350	14	0	1	350	1	350	6.9e-204	719.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene045475	MS.gene58319	PPI
MS.gene045475	MS.gene034762	PPI
MS.gene034686	MS.gene045475	PPI
MS.gene045475	MS.gene59943	PPI
MS.gene070461	MS.gene045475	PPI
MS.gene045475	MS.gene035262	PPI
MS.gene87559	MS.gene045475	PPI
MS.gene045475	MS.gene028390	PPI
MS.gene045475	MS.gene40878	PPI
MS.gene045475	MS.gene44428	PPI
MS.gene045475	MS.gene96407	PPI
MS.gene041475	MS.gene045475	PPI
MS.gene045475	MS.gene035235	PPI
MS.gene045475	MS.gene058703	PPI
MS.gene045475	MS.gene57528	PPI
MS.gene64203	MS.gene045475	PPI
MS.gene045475	MS.gene012215	PPI
MS.gene44892	MS.gene045475	PPI
MS.gene51202	MS.gene045475	PPI
MS.gene045475	MS.gene50297	PPI
MS.gene045475	MS.gene059101	PPI
MS.gene045475	MS.gene22715	PPI
MS.gene045475	MS.gene58316	PPI
MS.gene045475	MS.gene033430	PPI
MS.gene064111	MS.gene045475	PPI
MS.gene045475	MS.gene58321	PPI
MS.gene045475	MS.gene87564	PPI
MS.gene26829	MS.gene045475	PPI
MS.gene064104	MS.gene045475	PPI
MS.gene045475	MS.gene36595	PPI
MS.gene053256	MS.gene045475	PPI
MS.gene045475	MS.gene024004	PPI
MS.gene045475	MS.gene045140	PPI
MS.gene75875	MS.gene045475	PPI
MS.gene045475	MS.gene061240	PPI
MS.gene54049	MS.gene045475	PPI
MS.gene43789	MS.gene045475	PPI
MS.gene045475	MS.gene041473	PPI
MS.gene045475	MS.gene50311	PPI
MS.gene006710	MS.gene045475	PPI
MS.gene072177	MS.gene045475	PPI
MS.gene045475	MS.gene058989	PPI
MS.gene58722	MS.gene045475	PPI
MS.gene045475	MS.gene036556	PPI
MS.gene045475	MS.gene57538	PPI
MS.gene045475	MS.gene041468	PPI
MS.gene045475	MS.gene058693	PPI
MS.gene045475	MS.gene27319	PPI
MS.gene045475	MS.gene015089	PPI
MS.gene43796	MS.gene045475	PPI
MS.gene045475	MS.gene041395	PPI
MS.gene045475	MS.gene42447	PPI
MS.gene045475	MS.gene51189	PPI
MS.gene58312	MS.gene045475	PPI
MS.gene36704	MS.gene045475	PPI
MS.gene045475	MS.gene046958	PPI
MS.gene045475	MS.gene24286	PPI
MS.gene045475	MS.gene044425	PPI
MS.gene58313	MS.gene045475	PPI
MS.gene066622	MS.gene045475	PPI
MS.gene44887	MS.gene045475	PPI
MS.gene63655	MS.gene045475	PPI
MS.gene045475	MS.gene40988	PPI
MS.gene44883	MS.gene045475	PPI
MS.gene045475	MS.gene24173	PPI
MS.gene045475	MS.gene036584	PPI
MS.gene045475	MS.gene036662	PPI
MS.gene036583	MS.gene045475	PPI
MS.gene88780	MS.gene045475	PPI
MS.gene41046	MS.gene045475	PPI
MS.gene87588	MS.gene045475	PPI
MS.gene017412	MS.gene045475	PPI
MS.gene80884	MS.gene045475	PPI
MS.gene045475	MS.gene035261	PPI
MS.gene045475	MS.gene023999	PPI
MS.gene009883	MS.gene045475	PPI
MS.gene045475	MS.gene69307	PPI
MS.gene069075	MS.gene045475	PPI
MS.gene033427	MS.gene045475	PPI
MS.gene045475	MS.gene036581	PPI
MS.gene045475	MS.gene019507	PPI
MS.gene031591	MS.gene045475	PPI
MS.gene041474	MS.gene045475	PPI
MS.gene045475	MS.gene000036	PPI
MS.gene045475	MS.gene50320	PPI
MS.gene045475	MS.gene58314	PPI
MS.gene045475	MS.gene87557	PPI
MS.gene041388	MS.gene045475	PPI
MS.gene045475	MS.gene51199	PPI
MS.gene045475	MS.gene035263	PPI
MS.gene96126	MS.gene045475	PPI
MS.gene019503	MS.gene045475	PPI
MS.gene045475	MS.gene67501	PPI
MS.gene51208	MS.gene045475	PPI
MS.gene045475	MS.gene96406	PPI
MS.gene045475	MS.gene27285	PPI
MS.gene016524	MS.gene045475	PPI
MS.gene50304	MS.gene045475	PPI
MS.gene045475	MS.gene77858	PPI
MS.gene045475	MS.gene51201	PPI
MS.gene045475	MS.gene50336	PPI
MS.gene045475	MS.gene57526	PPI
MS.gene51204	MS.gene045475	PPI
MS.gene045475	MS.gene77704	PPI
MS.gene31587	MS.gene045475	PPI
MS.gene036557	MS.gene045475	PPI
MS.gene041393	MS.gene045475	PPI
MS.gene033441	MS.gene045475	PPI
MS.gene045475	MS.gene047279	PPI
MS.gene045475	MS.gene060370	PPI
MS.gene045475	MS.gene50305	PPI
MS.gene045475	MS.gene024002	PPI
MS.gene063826	MS.gene045475	PPI
MS.gene045475	MS.gene032969	PPI
MS.gene84698	MS.gene045475	PPI
MS.gene045475	MS.gene68890	PPI
MS.gene045475	MS.gene42445	PPI
MS.gene045475	MS.gene86273	PPI
MS.gene58239	MS.gene045475	PPI
MS.gene066641	MS.gene045475	PPI
MS.gene045475	MS.gene26830	PPI
MS.gene82082	MS.gene045475	PPI
MS.gene045475	MS.gene40985	PPI
MS.gene045475	MS.gene038756	PPI
MS.gene000038	MS.gene045475	PPI
MS.gene57531	MS.gene045475	PPI
MS.gene045475	MS.gene51207	PPI
MS.gene045475	MS.gene63657	PPI
MS.gene045475	MS.gene059157	PPI
MS.gene045475	MS.gene023996	PPI
MS.gene39262	MS.gene045475	PPI
MS.gene57535	MS.gene045475	PPI
MS.gene025887	MS.gene045475	PPI
MS.gene045475	MS.gene50301	PPI
MS.gene045475	MS.gene070462	PPI
MS.gene041470	MS.gene045475	PPI
MS.gene058694	MS.gene045475	PPI
MS.gene045475	MS.gene54049	PPI
MS.gene045475	MS.gene031590	PPI
MS.gene045475	MS.gene066623	PPI
MS.gene015089	MS.gene045475	PPI
MS.gene045475	MS.gene064086	PPI
MS.gene045475	MS.gene035234	PPI
MS.gene045475	MS.gene064090	PPI
MS.gene44885	MS.gene045475	PPI
MS.gene011679	MS.gene045475	PPI
MS.gene045475	MS.gene90742	PPI
MS.gene64001	MS.gene045475	PPI
MS.gene045475	MS.gene24212	PPI
MS.gene045475	MS.gene066639	PPI
MS.gene57533	MS.gene045475	PPI
MS.gene045475	MS.gene50332	PPI
MS.gene045475	MS.gene024979	PPI
MS.gene045475	MS.gene64203	PPI
MS.gene032970	MS.gene045475	PPI
MS.gene87586	MS.gene045475	PPI
MS.gene77856	MS.gene045475	PPI
MS.gene045475	MS.gene24826	PPI
MS.gene045475	MS.gene43790	PPI
MS.gene045475	MS.gene032970	PPI
MS.gene50339	MS.gene045475	PPI
MS.gene045475	MS.gene40982	PPI
MS.gene060366	MS.gene045475	PPI
MS.gene045475	MS.gene59637	PPI
MS.gene045475	MS.gene27022	PPI
MS.gene045475	MS.gene88416	PPI
MS.gene045475	MS.gene57530	PPI
MS.gene57529	MS.gene045475	PPI
MS.gene045475	MS.gene003076	PPI
MS.gene045475	MS.gene87585	PPI
MS.gene045475	MS.gene024009	PPI
MS.gene045475	MS.gene036599	PPI
MS.gene045475	MS.gene40887	PPI
MS.gene045475	MS.gene42444	PPI
MS.gene40902	MS.gene045475	PPI
MS.gene045475	MS.gene006705	PPI
MS.gene045475	MS.gene061241	PPI
MS.gene045475	MS.gene035237	PPI
MS.gene045475	MS.gene51188	PPI
MS.gene045475	MS.gene033875	PPI
MS.gene27020	MS.gene045475	PPI
MS.gene066620	MS.gene045475	PPI
MS.gene035236	MS.gene045475	PPI
MS.gene045475	MS.gene38220	PPI
MS.gene045475	MS.gene40986	PPI
MS.gene045475	MS.gene50309	PPI
MS.gene045475	MS.gene041394	PPI
MS.gene045475	MS.gene03060	PPI
MS.gene58781	MS.gene045475	PPI
MS.gene045475	MS.gene033440	PPI
MS.gene045475	MS.gene036664	PPI
MS.gene045475	MS.gene024011	PPI
MS.gene045475	MS.gene053257	PPI
MS.gene011106	MS.gene045475	PPI
MS.gene045475	MS.gene58241	PPI
MS.gene62398	MS.gene045475	PPI
MS.gene60027	MS.gene045475	PPI
MS.gene045475	MS.gene064109	PPI
MS.gene045475	MS.gene058696	PPI
MS.gene045475	MS.gene009893	PPI
MS.gene88776	MS.gene045475	PPI
MS.gene045475	MS.gene85043	PPI
MS.gene35068	MS.gene045475	PPI
MS.gene041390	MS.gene045475	PPI
MS.gene90744	MS.gene045475	PPI
MS.gene92376	MS.gene045475	PPI
MS.gene000035	MS.gene045475	PPI
MS.gene50329	MS.gene045475	PPI
MS.gene045475	MS.gene062698	PPI
MS.gene31637	MS.gene045475	PPI
MS.gene87573	MS.gene045475	PPI
MS.gene045475	MS.gene033083	PPI
MS.gene57537	MS.gene045475	PPI
MS.gene019504	MS.gene045475	PPI
MS.gene059156	MS.gene045475	PPI
MS.gene045475	MS.gene40886	PPI
MS.gene045475	MS.gene033081	PPI
MS.gene045475	MS.gene036663	PPI
MS.gene045475	MS.gene68580	PPI
MS.gene033444	MS.gene045475	PPI
MS.gene045475	MS.gene041391	PPI
MS.gene50306	MS.gene045475	PPI
MS.gene045475	MS.gene57525	PPI
MS.gene045475	MS.gene030114	PPI
MS.gene26949	MS.gene045475	PPI
MS.gene045475	MS.gene045473	PPI
MS.gene045475	MS.gene88774	PPI
MS.gene036760	MS.gene045475	PPI
MS.gene045475	MS.gene045474	PPI
MS.gene045475	MS.gene036558	PPI
MS.gene87200	MS.gene045475	PPI
MS.gene58311	MS.gene045475	PPI
MS.gene045475	MS.gene87554	PPI
MS.gene045475	MS.gene27051	PPI
MS.gene033432	MS.gene045475	PPI
MS.gene045475	MS.gene40984	PPI
MS.gene045475	MS.gene064108	PPI
MS.gene045475	MS.gene016220	PPI
MS.gene59639	MS.gene045475	PPI
MS.gene045475	MS.gene24208	PPI
MS.gene045475	MS.gene58317	PPI
MS.gene045475	MS.gene063670	PPI
MS.gene066635	MS.gene045475	PPI
MS.gene010758	MS.gene045475	PPI
MS.gene063670	MS.gene045475	PPI
MS.gene045475	MS.gene57531	PPI
MS.gene045475	MS.gene58240	PPI
MS.gene045475	MS.gene27284	PPI
MS.gene019506	MS.gene045475	PPI
MS.gene50326	MS.gene045475	PPI
MS.gene045475	MS.gene063472	PPI
MS.gene045475	MS.gene57717	PPI
MS.gene045475	MS.gene034680	PPI
MS.gene045475	MS.gene27021	PPI
MS.gene045475	MS.gene48221	PPI
MS.gene045475	MS.gene044563	PPI
MS.gene045475	MS.gene50327	PPI
MS.gene045475	MS.gene066626	PPI
MS.gene045475	MS.gene063474	PPI
MS.gene045475	MS.gene51190	PPI
MS.gene045475	MS.gene71159	PPI
MS.gene045475	MS.gene044426	PPI
MS.gene045475	MS.gene034681	PPI
MS.gene42452	MS.gene045475	PPI
MS.gene063414	MS.gene045475	PPI
MS.gene045475	MS.gene57532	PPI
MS.gene045475	MS.gene033442	PPI
MS.gene045475	MS.gene009892	PPI
MS.gene87563	MS.gene045475	PPI
MS.gene57526	MS.gene045475	PPI
MS.gene045475	MS.gene058669	PPI
MS.gene045475	MS.gene066120	PPI
MS.gene045475	MS.gene51192	PPI
MS.gene021553	MS.gene045475	PPI
MS.gene051820	MS.gene045475	PPI
MS.gene26957	MS.gene045475	PPI
MS.gene97996	MS.gene045475	PPI
MS.gene036582	MS.gene045475	PPI
MS.gene27021	MS.gene045475	PPI
MS.gene58320	MS.gene045475	PPI
MS.gene045475	MS.gene041489	PPI
MS.gene81242	MS.gene045475	PPI
MS.gene26101	MS.gene045475	PPI
MS.gene27283	MS.gene045475	PPI
MS.gene045475	MS.gene36704	PPI
MS.gene045475	MS.gene024000	PPI
MS.gene045475	MS.gene034688	PPI
MS.gene045475	MS.gene24213	PPI
MS.gene42444	MS.gene045475	PPI
MS.gene045475	MS.gene31637	PPI
MS.gene045475	MS.gene033079	PPI
MS.gene045475	MS.gene034677	PPI
MS.gene44886	MS.gene045475	PPI
MS.gene045475	MS.gene055694	PPI
MS.gene87562	MS.gene045475	PPI
MS.gene045475	MS.gene035238	PPI
MS.gene40904	MS.gene045475	PPI
MS.gene045475	MS.gene064114	PPI
MS.gene045475	MS.gene87584	PPI
MS.gene87569	MS.gene045475	PPI
MS.gene045475	MS.gene58315	PPI
MS.gene045475	MS.gene80610	PPI
MS.gene041491	MS.gene045475	PPI
MS.gene045475	MS.gene90743	PPI
MS.gene059096	MS.gene045475	PPI
MS.gene57528	MS.gene045475	PPI
MS.gene045475	MS.gene85454	PPI
MS.gene006711	MS.gene045475	PPI
MS.gene045475	MS.gene064112	PPI
MS.gene58716	MS.gene045475	PPI
MS.gene064091	MS.gene045475	PPI
MS.gene019505	MS.gene045475	PPI
MS.gene045475	MS.gene033443	PPI
MS.gene045476	MS.gene045475	PPI
MS.gene045475	MS.gene060367	PPI
MS.gene58785	MS.gene045475	PPI
MS.gene50307	MS.gene045475	PPI
MS.gene034690	MS.gene045475	PPI
MS.gene045475	MS.gene57536	PPI
MS.gene045475	MS.gene51200	PPI
MS.gene045475	MS.gene021553	PPI
MS.gene045475	MS.gene44887	PPI
MS.gene045475	MS.gene058701	PPI
MS.gene77857	MS.gene045475	PPI
MS.gene045475	MS.gene009891	PPI
MS.gene045475	MS.gene064083	PPI
MS.gene57527	MS.gene045475	PPI
MS.gene51191	MS.gene045475	PPI
MS.gene045475	MS.gene048193	PPI
MS.gene045475	MS.gene58783	PPI
MS.gene033426	MS.gene045475	PPI
MS.gene045475	MS.gene024420	PPI
MS.gene045475	MS.gene57533	PPI
MS.gene045475	MS.gene024008	PPI
MS.gene045475	MS.gene50337	PPI
MS.gene50298	MS.gene045475	PPI
MS.gene045475	MS.gene54541	PPI
MS.gene045475	MS.gene39265	PPI
MS.gene67687	MS.gene045475	PPI
MS.gene045475	MS.gene041393	PPI
MS.gene045475	MS.gene060368	PPI
MS.gene045475	MS.gene053299	PPI
MS.gene045475	MS.gene28758	PPI
MS.gene045475	MS.gene044429	PPI
MS.gene045475	MS.gene42451	PPI
MS.gene045475	MS.gene50304	PPI
MS.gene71159	MS.gene045475	PPI
MS.gene96448	MS.gene045475	PPI
MS.gene045475	MS.gene019503	PPI
MS.gene058692	MS.gene045475	PPI
MS.gene041392	MS.gene045475	PPI
MS.gene69309	MS.gene045475	PPI
MS.gene63658	MS.gene045475	PPI
MS.gene033081	MS.gene045475	PPI
MS.gene045475	MS.gene033431	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045475.t1	MTR_4g080200	96.000	350	14	0	1	350	1	350	0.0	706
MS.gene045475.t1	MTR_1g023400	46.133	375	153	16	1	349	1	352	3.80e-88	269
MS.gene045475.t1	MTR_1g022200	46.400	375	157	18	1	349	13	369	1.89e-83	258
MS.gene045475.t1	MTR_1g009110	45.040	373	171	13	3	349	14	378	6.58e-83	256
MS.gene045475.t1	MTR_1g037540	37.778	405	185	16	3	349	5	400	9.11e-66	213
MS.gene045475.t1	MTR_1g022105	34.682	346	156	11	3	327	21	317	1.08e-46	161
MS.gene045475.t1	MTR_1g023430	49.630	135	64	3	216	349	41	172	2.83e-34	124
MS.gene045475.t1	MTR_8g093280	55.208	96	37	2	7	97	11	105	3.99e-27	103
MS.gene045475.t1	MTR_1g008000	31.034	290	142	12	70	349	27	268	1.80e-25	103
MS.gene045475.t1	MTR_1g024125	49.558	113	53	4	220	329	38	149	5.88e-24	96.7
MS.gene045475.t1	MTR_4g117780	31.405	242	135	9	3	229	11	236	2.01e-19	88.6
MS.gene045475.t1	MTR_3g034130	29.412	272	157	9	2	246	4	267	2.23e-19	88.6
MS.gene045475.t1	MTR_4g109280	28.621	290	177	11	7	282	12	285	7.09e-19	87.0
MS.gene045475.t1	MTR_5g027370	24.165	389	227	15	3	343	29	397	8.75e-19	87.4
MS.gene045475.t1	MTR_3g009240	24.847	326	188	13	10	304	43	342	1.12e-18	86.7
MS.gene045475.t1	MTR_7g016930	28.000	275	166	10	7	261	20	282	1.45e-18	85.9
MS.gene045475.t1	MTR_5g027330	24.165	389	227	15	3	343	40	408	1.84e-18	86.7
MS.gene045475.t1	MTR_3g034180	26.688	311	193	9	7	294	127	425	2.25e-18	86.3
MS.gene045475.t1	MTR_4g133170	25.926	297	180	12	10	284	11	289	3.38e-18	85.5
MS.gene045475.t1	MTR_7g070440	26.042	384	222	16	5	347	9	371	5.05e-18	84.7
MS.gene045475.t1	MTR_4g117770	31.513	238	132	9	7	229	15	236	1.30e-17	83.2
MS.gene045475.t1	MTR_4g117810	31.513	238	132	9	7	229	15	236	1.30e-17	83.2
MS.gene045475.t1	MTR_3g009260	24.185	368	197	15	10	340	48	370	1.63e-17	83.2
MS.gene045475.t1	MTR_2g021150	29.119	261	137	12	3	235	14	254	1.81e-17	83.2
MS.gene045475.t1	MTR_2g048580	27.304	293	161	12	3	275	8	268	2.51e-17	82.4
MS.gene045475.t1	MTR_3g009310	25.077	323	195	14	10	304	49	352	3.18e-17	82.4
MS.gene045475.t1	MTR_5g010610	24.148	352	185	15	3	288	34	369	7.24e-17	82.0
MS.gene045475.t1	MTR_5g010560	24.355	349	181	15	7	288	48	380	1.19e-16	81.3
MS.gene045475.t1	MTR_4g116330	26.744	258	154	9	7	246	27	267	2.32e-16	79.7
MS.gene045475.t1	MTR_3g013740	25.237	317	176	12	10	287	51	345	2.55e-16	80.1
MS.gene045475.t1	MTR_6g007135	26.059	307	178	14	7	282	30	318	3.26e-16	79.3
MS.gene045475.t1	MTR_3g103020	27.241	290	171	11	7	275	24	294	3.43e-16	79.3
MS.gene045475.t1	MTR_8g013010	28.826	281	151	15	1	256	52	308	3.74e-16	78.6
MS.gene045475.t1	MTR_3g007330	24.513	359	206	16	10	332	55	384	4.04e-16	79.3
MS.gene045475.t1	MTR_2g046920	28.968	252	144	9	3	236	24	258	4.86e-16	79.0
MS.gene045475.t1	MTR_5g010550	25.000	360	175	17	3	288	44	382	5.27e-16	79.3
MS.gene045475.t1	MTR_5g010550	25.000	360	175	17	3	288	58	396	7.51e-16	79.0
MS.gene045475.t1	MTR_4g055060	25.402	311	170	14	10	284	37	321	9.15e-16	78.2
MS.gene045475.t1	MTR_3g007360	26.333	300	178	16	10	285	59	339	9.64e-16	78.2
MS.gene045475.t1	MTR_6g065980	26.923	312	149	16	7	284	20	286	1.01e-15	77.8
MS.gene045475.t1	MTR_1g094210	27.653	311	169	15	3	282	57	342	1.09e-15	77.8
MS.gene045475.t1	MTR_0667s0010	24.471	331	204	13	10	305	13	332	1.10e-15	78.2
MS.gene045475.t1	MTR_2g034700	31.390	223	122	10	11	208	22	238	1.24e-15	77.8
MS.gene045475.t1	MTR_1g094210	27.653	311	169	15	3	282	57	342	1.47e-15	77.8
MS.gene045475.t1	MTR_1g061330	24.185	368	207	15	3	324	4	345	1.62e-15	77.4
MS.gene045475.t1	MTR_2g046900	28.740	254	150	11	3	236	28	270	2.62e-15	76.6
MS.gene045475.t1	MTR_4g117850	26.571	350	208	15	3	325	23	350	2.91e-15	76.6
MS.gene045475.t1	MTR_6g053260	25.237	317	195	14	7	297	341	641	2.99e-15	77.4
MS.gene045475.t1	MTR_3g007410	26.733	303	173	17	10	285	59	339	3.10e-15	76.6
MS.gene045475.t1	MTR_3g013770	25.329	304	178	11	10	284	40	323	3.17e-15	76.6
MS.gene045475.t1	MTR_5g057710	24.367	316	182	12	10	295	53	341	3.25e-15	76.6
MS.gene045475.t1	MTR_3g058470	28.986	207	117	5	7	189	41	241	3.47e-15	76.3
MS.gene045475.t1	MTR_6g027910	24.194	310	183	12	7	280	13	306	3.73e-15	76.3
MS.gene045475.t1	MTR_3g058440	28.906	256	143	10	7	238	39	279	4.48e-15	75.5
MS.gene045475.t1	MTR_5g070130	29.796	245	138	10	2	227	6	235	4.60e-15	75.9
MS.gene045475.t1	MTR_4g109270	26.230	305	183	13	1	282	6	291	5.67e-15	75.5
MS.gene045475.t1	MTR_1g054575	26.403	303	179	13	3	286	52	329	6.56e-15	76.3
MS.gene045475.t1	MTR_8g464770	26.364	330	193	14	7	300	16	331	9.74e-15	75.1
MS.gene045475.t1	MTR_5g010660	24.202	376	211	17	6	348	37	371	1.01e-14	75.5
MS.gene045475.t1	MTR_8g073550	29.688	192	106	6	7	180	34	214	1.22e-14	72.8
MS.gene045475.t1	MTR_6g004660	23.699	346	220	15	7	319	20	354	1.54e-14	74.3
MS.gene045475.t1	MTR_0115s0020	25.994	327	185	14	3	284	10	324	2.65e-14	73.9
MS.gene045475.t1	MTR_3g034160	28.938	273	157	11	2	246	4	267	3.31e-14	73.6
MS.gene045475.t1	MTR_4g094365	24.855	346	209	11	7	324	12	334	4.56e-14	72.8
MS.gene045475.t1	MTR_7g013590	26.959	319	182	17	7	296	40	336	4.70e-14	73.2
MS.gene045475.t1	MTR_2g026010	23.220	323	202	13	22	313	23	330	5.22e-14	72.8
MS.gene045475.t1	MTR_7g017040	27.068	266	143	10	11	235	24	279	5.54e-14	72.8
MS.gene045475.t1	MTR_3g058480	24.806	258	153	8	7	238	43	285	6.14e-14	72.4
MS.gene045475.t1	MTR_5g057020	22.378	286	170	8	10	277	53	304	7.68e-14	72.0
MS.gene045475.t1	MTR_5g074850	27.509	269	140	12	7	229	39	298	8.32e-14	73.2
MS.gene045475.t1	MTR_1g050542	26.974	304	180	12	3	289	58	336	8.77e-14	72.4
MS.gene045475.t1	MTR_3g036430	22.535	284	174	10	10	284	27	273	1.01e-13	71.6
MS.gene045475.t1	MTR_5g075370	27.372	274	141	13	5	229	10	274	1.06e-13	72.8
MS.gene045475.t1	MTR_4g023080	26.316	247	152	7	1	235	7	235	1.22e-13	71.6
MS.gene045475.t1	MTR_4g023090	24.828	290	185	8	3	275	16	289	1.27e-13	71.6
MS.gene045475.t1	MTR_4g061340	22.687	335	198	14	10	309	33	341	1.32e-13	71.6
MS.gene045475.t1	MTR_3g030350	23.881	335	201	15	7	312	39	348	1.36e-13	71.6
MS.gene045475.t1	MTR_1g097330	25.000	308	171	11	3	282	16	291	2.23e-13	71.2
MS.gene045475.t1	MTR_4g116330	28.054	221	124	9	7	209	27	230	2.47e-13	70.5
MS.gene045475.t1	MTR_5g022040	24.728	368	183	16	3	289	40	394	2.99e-13	70.9
MS.gene045475.t1	MTR_4g023440	27.197	239	137	9	3	223	18	237	3.02e-13	70.1
MS.gene045475.t1	MTR_3g014540	25.333	300	179	16	10	284	36	315	4.20e-13	70.1
MS.gene045475.t1	MTR_2g104340	25.000	292	154	13	11	260	22	290	4.53e-13	70.1
MS.gene045475.t1	MTR_8g467140	27.969	261	136	12	3	236	32	267	5.15e-13	69.3
MS.gene045475.t1	MTR_1g056710	27.200	250	150	11	7	237	38	274	7.22e-13	69.3
MS.gene045475.t1	MTR_0064s0160	28.679	265	143	12	11	239	50	304	7.95e-13	69.7
MS.gene045475.t1	MTR_1g055135	25.000	348	221	13	3	325	13	345	8.19e-13	69.3
MS.gene045475.t1	MTR_2g046830	26.482	253	148	9	3	236	25	258	9.55e-13	68.9
MS.gene045475.t1	MTR_4g107780	26.877	253	147	10	3	236	36	269	1.11e-12	68.9
MS.gene045475.t1	MTR_4g107820	26.877	253	147	10	3	236	36	269	1.12e-12	68.9
MS.gene045475.t1	MTR_4g107780	26.877	253	147	10	3	236	36	269	1.12e-12	68.9
MS.gene045475.t1	MTR_4g107820	26.877	253	147	10	3	236	36	269	1.14e-12	68.9
MS.gene045475.t1	MTR_6g048140	23.824	319	193	9	10	297	46	345	1.48e-12	68.6
MS.gene045475.t1	MTR_4g129190	23.792	269	159	8	1	236	4	259	1.60e-12	68.6
MS.gene045475.t1	MTR_5g057790	23.948	309	170	13	10	284	53	330	1.74e-12	68.2
MS.gene045475.t1	MTR_5g097330	25.000	276	152	8	5	235	18	283	2.12e-12	68.2
MS.gene045475.t1	MTR_4g023070	28.400	250	151	9	1	235	1	237	2.25e-12	67.8
MS.gene045475.t1	MTR_2g426090	24.484	339	204	16	7	305	10	336	2.61e-12	67.8
MS.gene045475.t1	MTR_3g024110	23.692	325	177	16	7	294	105	395	3.09e-12	67.8
MS.gene045475.t1	MTR_4g108820	27.615	239	131	11	3	236	42	243	3.12e-12	67.0
MS.gene045475.t1	MTR_7g017130	23.179	302	170	12	7	262	22	307	3.13e-12	67.4
MS.gene045475.t1	MTR_4g023120	28.516	256	143	10	1	235	1	237	3.32e-12	67.4
MS.gene045475.t1	MTR_4g117550	26.866	268	146	13	7	235	21	277	3.63e-12	67.4
MS.gene045475.t1	MTR_7g017170	22.185	302	173	11	7	262	22	307	3.66e-12	67.4
MS.gene045475.t1	MTR_8g012090	25.882	255	125	10	11	235	24	244	3.88e-12	67.0
MS.gene045475.t1	MTR_8g039500	23.750	320	205	12	5	295	14	323	4.51e-12	66.6
MS.gene045475.t1	MTR_1g007450	28.996	269	131	14	7	229	16	270	6.67e-12	66.6
MS.gene045475.t1	MTR_5g092850	25.103	243	132	9	7	209	20	252	6.92e-12	66.6
MS.gene045475.t1	MTR_2g028110	23.547	327	201	13	10	305	11	319	7.24e-12	66.2
MS.gene045475.t1	MTR_1g055165	32.450	151	77	5	3	139	10	149	8.60e-12	65.9
MS.gene045475.t1	MTR_3g010520	24.252	301	160	13	10	284	32	290	8.94e-12	65.9
MS.gene045475.t1	MTR_1g007410	26.061	330	171	14	11	285	30	341	9.07e-12	66.2
MS.gene045475.t1	MTR_8g433040	25.071	351	204	13	7	329	22	341	9.18e-12	65.9
MS.gene045475.t1	MTR_8g032380	25.071	351	204	13	7	329	22	341	9.18e-12	65.9
MS.gene045475.t1	MTR_7g057270	25.941	239	137	8	3	213	26	252	9.80e-12	66.2
MS.gene045475.t1	MTR_4g116340	30.000	230	133	9	3	222	36	247	1.12e-11	64.7
MS.gene045475.t1	MTR_4g021785	25.296	253	148	8	1	235	7	236	1.21e-11	65.5
MS.gene045475.t1	MTR_2g021190	24.696	247	156	7	10	238	28	262	1.31e-11	65.5
MS.gene045475.t1	MTR_1g007430	34.132	167	69	11	14	149	7	163	1.60e-11	65.1
MS.gene045475.t1	MTR_5g022420	27.586	261	137	14	3	241	27	257	2.11e-11	65.1
MS.gene045475.t1	MTR_3g006500	23.226	310	166	14	10	282	24	298	2.32e-11	64.7
MS.gene045475.t1	MTR_5g094350	26.820	261	153	12	7	235	17	271	2.64e-11	63.9
MS.gene045475.t1	MTR_8g064890	28.295	258	142	13	7	229	20	269	2.68e-11	64.7
MS.gene045475.t1	MTR_3g036335	24.845	322	175	16	10	295	48	338	2.75e-11	64.7
MS.gene045475.t1	MTR_3g011650	32.558	172	91	7	10	164	86	249	3.22e-11	63.5
MS.gene045475.t1	MTR_3g009250	29.082	196	97	8	10	184	48	222	3.63e-11	63.2
MS.gene045475.t1	MTR_4g014370	25.455	275	153	11	7	229	15	289	3.74e-11	64.3
MS.gene045475.t1	MTR_5g021860	23.529	323	193	16	6	304	107	399	4.10e-11	64.3
MS.gene045475.t1	MTR_2g078900	21.795	312	175	12	7	284	37	313	4.15e-11	63.9
MS.gene045475.t1	MTR_2g047832	25.830	271	147	12	3	236	29	282	4.50e-11	63.9
MS.gene045475.t1	MTR_5g021860	23.529	323	193	16	6	304	107	399	4.63e-11	64.3
MS.gene045475.t1	MTR_2g021155	28.340	247	138	14	10	235	43	271	4.73e-11	64.7
MS.gene045475.t1	MTR_5g048160	23.765	324	189	15	11	286	12	325	5.53e-11	63.5
MS.gene045475.t1	MTR_5g057690	23.729	295	178	9	10	284	53	320	6.11e-11	63.5
MS.gene045475.t1	MTR_2g021050	23.907	343	189	17	10	314	12	320	6.33e-11	63.5
MS.gene045475.t1	MTR_1g097490	31.288	163	84	7	2	146	48	200	7.37e-11	63.2
MS.gene045475.t1	MTR_3g014570	24.252	301	189	14	9	287	35	318	8.06e-11	63.2
MS.gene045475.t1	MTR_7g407070	23.214	336	178	16	10	291	39	348	8.62e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045475.t1	AT3G16210	28.862	246	134	11	3	235	5	222	8.76e-18	84.0
MS.gene045475.t1	AT3G06240	26.347	334	163	15	10	283	43	353	2.04e-15	77.4
MS.gene045475.t1	AT2G40925	24.161	298	192	9	7	283	31	315	2.20e-14	73.9
MS.gene045475.t1	AT1G30790	27.213	305	179	14	7	281	13	304	1.50e-13	71.6
MS.gene045475.t1	AT2G16810	27.016	248	148	10	7	236	45	277	2.71e-13	70.1
MS.gene045475.t1	AT3G07870	25.455	330	173	17	3	286	28	330	9.29e-13	69.3
MS.gene045475.t1	AT3G23880	27.243	301	173	13	10	284	21	301	6.03e-12	66.6
MS.gene045475.t1	AT3G17500	24.681	235	157	5	10	237	11	232	6.33e-12	66.6
MS.gene045475.t1	AT3G17500	24.681	235	157	5	10	237	12	233	6.35e-12	66.6
MS.gene045475.t1	AT2G43445	24.054	370	223	16	3	348	14	349	1.99e-11	65.1
MS.gene045475.t1	AT2G43440	25.135	370	217	18	5	348	16	351	2.14e-11	65.1
MS.gene045475.t1	AT1G12870	23.602	322	196	13	10	298	40	344	4.86e-11	63.9

Find 70 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAGACATCATCACAGAAAA+AGG	0.175791	4.2:-29812245	None:intergenic
AATGAAGCTTGGAGAATATT+TGG	0.183198	4.2:+29811520	None:intergenic
GTATCGTTTGGTTGGAAATA+TGG	0.217514	4.2:+29812311	MS.gene045475:CDS
ATTTCTTCTAGTGGCAAAAT+AGG	0.224361	4.2:-29811630	None:intergenic
GTTGCAAGAATTGAAATTTA+TGG	0.226085	4.2:+29811755	MS.gene045475:CDS
GATGAATCCTTGTATGGTTT+TGG	0.233004	4.2:+29811914	MS.gene045475:CDS
CTAAAGTATCAAGTTGAAAT+TGG	0.240727	4.2:-29812492	None:intergenic
GAAATCCTTGTAGGCGAGTT+TGG	0.247381	4.2:+29812424	MS.gene045475:CDS
AACAAAGATTTGATGGGAAT+TGG	0.295377	4.2:-29811722	None:intergenic
TAAACATCTCTGATACTAAT+AGG	0.315807	4.2:+29811969	MS.gene045475:CDS
GATGATGTCTTTGAGATAAA+AGG	0.343460	4.2:+29812256	MS.gene045475:CDS
GAGCTTCTAGTTTCCGAAAC+TGG	0.354394	4.2:-29812201	None:intergenic
TACTCTGATGAATCCTTGTA+TGG	0.371043	4.2:+29811908	MS.gene045475:CDS
CAGCCATCCTCCTATTACTA+TGG	0.376905	4.2:+29812063	MS.gene045475:CDS
TTTGAGATAAAAGGTTATCT+TGG	0.377564	4.2:+29812265	MS.gene045475:CDS
AAATCCTTGTAGGCGAGTTT+GGG	0.384280	4.2:+29812425	MS.gene045475:CDS
GATGGACATCTTTAGTTGTC+GGG	0.384840	4.2:-29811853	None:intergenic
TTGAGGAAACAAAGATTTGA+TGG	0.393759	4.2:-29811729	None:intergenic
AGATATAACACTCTTGTTAA+CGG	0.395015	4.2:+29812106	MS.gene045475:CDS
AAACTAGAAGCTCCAAAGTT+AGG	0.397237	4.2:+29812211	MS.gene045475:CDS
TTTCTTCTAGTGGCAAAATA+GGG	0.399929	4.2:-29811629	None:intergenic
ACAAGAGTGTTATATCTTGA+AGG	0.406492	4.2:-29812100	None:intergenic
CAAAAGATAAACTTCATGTT+AGG	0.419890	4.2:-29811677	None:intergenic
TTGTTAACGGTGTTTATCAC+TGG	0.423529	4.2:+29812119	MS.gene045475:CDS
ATTTATGGTCTTTGGAATGA+TGG	0.431496	4.2:+29812397	MS.gene045475:CDS
TTGGTTATGTTGTGCAATAT+AGG	0.435734	4.2:+29812284	MS.gene045475:CDS
ACTTTCGCGATAACCAGTTT+CGG	0.452500	4.2:+29812188	MS.gene045475:CDS
AGCCGTGTGACCATAGTAAT+AGG	0.454782	4.2:-29812073	None:intergenic
AATATAGGTGTAGTATCGTT+TGG	0.455302	4.2:+29812299	MS.gene045475:CDS
TATGGACTCTGGAACAAAAC+GGG	0.458302	4.2:+29812329	MS.gene045475:CDS
ATGATCTAAGCACAAAATCA+TGG	0.473970	4.2:+29812029	MS.gene045475:CDS
TCAATTCTTGCAACGTCTTG+AGG	0.481185	4.2:-29811746	None:intergenic
GATGGTGCTGAAATCCTTGT+AGG	0.494250	4.2:+29812415	MS.gene045475:CDS
ATATGGACTCTGGAACAAAA+CGG	0.496728	4.2:+29812328	MS.gene045475:CDS
TTTGACAATGGAGCCATGCT+TGG	0.497416	4.2:-29812547	None:intergenic
GGGATATAGTGACCTAACTT+TGG	0.499776	4.2:-29812223	None:intergenic
TAGGTGTAGTATCGTTTGGT+TGG	0.513898	4.2:+29812303	MS.gene045475:CDS
TTGGTTGGAAATATGGACTC+TGG	0.520615	4.2:+29812318	MS.gene045475:CDS
GCTGCCCAAACTCGCCTACA+AGG	0.520760	4.2:-29812429	None:intergenic
CACTGGATTACGAGCTCTGA+TGG	0.521928	4.2:+29812136	MS.gene045475:CDS
AGATGGACATCTTTAGTTGT+CGG	0.521973	4.2:-29811854	None:intergenic
GTAGGCAGCTACTTTGACAA+TGG	0.532210	4.2:-29812559	None:intergenic
ATTCCTCATGCTCCCTCACT+CGG	0.534732	4.2:+29811878	MS.gene045475:CDS
TAATAGGAGGATGGCTGACG+AGG	0.536709	4.2:-29812057	None:intergenic
TGAGGAAACAAAGATTTGAT+GGG	0.549628	4.2:-29811728	None:intergenic
AACAGCACCAAAACCATACA+AGG	0.549888	4.2:-29811921	None:intergenic
CTCACATCATGCGATCATCA+TGG	0.551098	4.2:+29812457	MS.gene045475:CDS
AGGGAGCATGAGGAATAAGA+TGG	0.552171	4.2:-29811871	None:intergenic
AATAGGAGGATGGCTGACGA+GGG	0.554286	4.2:-29812056	None:intergenic
AGAGTAATGGTTACCGAGTG+AGG	0.564348	4.2:-29811891	None:intergenic
TGAGCATAGAGAATGAAGCT+TGG	0.567853	4.2:+29811509	None:intergenic
GAAATTTATGGTAGTTGCGA+CGG	0.568199	4.2:+29811767	MS.gene045475:CDS
TAGGAGGATGGCTGACGAGG+GGG	0.568758	4.2:-29812054	None:intergenic
CATCTCTGATACTAATAGGA+TGG	0.572474	4.2:+29811973	MS.gene045475:CDS
ACAAGGATTCATCAGAGTAA+TGG	0.574491	4.2:-29811904	None:intergenic
GACTCTGGAACAAAACGGGT+GGG	0.578193	4.2:+29812333	MS.gene045475:CDS
TTGTAGGCGAGTTTGGGCAG+CGG	0.578405	4.2:+29812431	MS.gene045475:CDS
AGGAGGATGGCTGACGAGGG+GGG	0.580453	4.2:-29812053	None:intergenic
TAGAAGACGATTTCTTCTAG+TGG	0.593425	4.2:-29811639	None:intergenic
GAGTAATGGTTACCGAGTGA+GGG	0.602835	4.2:-29811890	None:intergenic
TTACGAGTATGTGCCAAGCA+TGG	0.605100	4.2:+29812534	MS.gene045475:CDS
CTCCTATTACTATGGTCACA+CGG	0.608239	4.2:+29812071	MS.gene045475:CDS
TGACCATAGTAATAGGAGGA+TGG	0.619998	4.2:-29812066	None:intergenic
ATAGGAGGATGGCTGACGAG+GGG	0.623335	4.2:-29812055	None:intergenic
GGACTCTGGAACAAAACGGG+TGG	0.624566	4.2:+29812332	MS.gene045475:CDS
CGTGTGACCATAGTAATAGG+AGG	0.626714	4.2:-29812070	None:intergenic
TGGAGATAGAGATATTGTTG+CGG	0.647060	4.2:+29811540	MS.gene045475:CDS
TTACCGAGTGAGGGAGCATG+AGG	0.656501	4.2:-29811881	None:intergenic
TATCGCGAAAGTCAAAGCAA+AGG	0.669569	4.2:-29812177	None:intergenic
ATCGTGACGAGTTATGCATG+AGG	0.722344	4.2:-29811813	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATGTCAATTTTTCATATTTA+TGG	+	chr4.2:29812382-29812401	MS.gene045475:CDS	15.0%
!!!	GAAAATAAATTCTCTTTTGA+AGG	+	chr4.2:29811997-29812016	MS.gene045475:CDS	20.0%
!!!	TGTATCAATGTTATACTTTT+TGG	-	chr4.2:29812359-29812378	None:intergenic	20.0%
!!!	TTTTTCATATTTATGGTCTT+TGG	+	chr4.2:29812389-29812408	MS.gene045475:CDS	20.0%
!	AGATATAACACTCTTGTTAA+CGG	+	chr4.2:29812106-29812125	MS.gene045475:CDS	25.0%
!	CAAAAGATAAACTTCATGTT+AGG	-	chr4.2:29811680-29811699	None:intergenic	25.0%
!	GTTGCAAGAATTGAAATTTA+TGG	+	chr4.2:29811755-29811774	MS.gene045475:CDS	25.0%
!	TAAACATCTCTGATACTAAT+AGG	+	chr4.2:29811969-29811988	MS.gene045475:CDS	25.0%
!	TCAAATGTGTTCAAAAATCA+TGG	+	chr4.2:29811588-29811607	MS.gene045475:CDS	25.0%
!!	ATGAAGTTTATCTTTTGTGA+TGG	+	chr4.2:29811683-29811702	MS.gene045475:CDS	25.0%
!!	TTTGAGATAAAAGGTTATCT+TGG	+	chr4.2:29812265-29812284	MS.gene045475:CDS	25.0%
!!!	AATAAATTCTCTTTTGAAGG+CGG	+	chr4.2:29812000-29812019	MS.gene045475:CDS	25.0%
!!!	CTAAAGTATCAAGTTGAAAT+TGG	-	chr4.2:29812495-29812514	None:intergenic	25.0%
	AAAGACATCATCACAGAAAA+AGG	-	chr4.2:29812248-29812267	None:intergenic	30.0%
	AACAAAGATTTGATGGGAAT+TGG	-	chr4.2:29811725-29811744	None:intergenic	30.0%
	AAGACATCATCACAGAAAAA+GGG	-	chr4.2:29812247-29812266	None:intergenic	30.0%
	AATATAGGTGTAGTATCGTT+TGG	+	chr4.2:29812299-29812318	MS.gene045475:CDS	30.0%
	ATGATCTAAGCACAAAATCA+TGG	+	chr4.2:29812029-29812048	MS.gene045475:CDS	30.0%
	ATTTCTTCTAGTGGCAAAAT+AGG	-	chr4.2:29811633-29811652	None:intergenic	30.0%
	TGAGGAAACAAAGATTTGAT+GGG	-	chr4.2:29811731-29811750	None:intergenic	30.0%
	TTGAGGAAACAAAGATTTGA+TGG	-	chr4.2:29811732-29811751	None:intergenic	30.0%
	TTGGTTATGTTGTGCAATAT+AGG	+	chr4.2:29812284-29812303	MS.gene045475:CDS	30.0%
	TTTCTTCTAGTGGCAAAATA+GGG	-	chr4.2:29811632-29811651	None:intergenic	30.0%
!	AAGTTTATCTTTTGTGATGG+AGG	+	chr4.2:29811686-29811705	MS.gene045475:CDS	30.0%
!!	ACAAGAGTGTTATATCTTGA+AGG	-	chr4.2:29812103-29812122	None:intergenic	30.0%
!!	ATTTATGGTCTTTGGAATGA+TGG	+	chr4.2:29812397-29812416	MS.gene045475:CDS	30.0%
!!	CTTTAGAGAATGCTTGTTTT+TGG	+	chr4.2:29812509-29812528	MS.gene045475:CDS	30.0%
!!	GATGATGTCTTTGAGATAAA+AGG	+	chr4.2:29812256-29812275	MS.gene045475:CDS	30.0%
	AAACTAGAAGCTCCAAAGTT+AGG	+	chr4.2:29812211-29812230	MS.gene045475:CDS	35.0%
	ACAAGGATTCATCAGAGTAA+TGG	-	chr4.2:29811907-29811926	None:intergenic	35.0%
	AGACATCATCACAGAAAAAG+GGG	-	chr4.2:29812246-29812265	None:intergenic	35.0%
	AGATGGACATCTTTAGTTGT+CGG	-	chr4.2:29811857-29811876	None:intergenic	35.0%
	CATCTCTGATACTAATAGGA+TGG	+	chr4.2:29811973-29811992	MS.gene045475:CDS	35.0%
	GAAATTTATGGTAGTTGCGA+CGG	+	chr4.2:29811767-29811786	MS.gene045475:CDS	35.0%
	GTATCGTTTGGTTGGAAATA+TGG	+	chr4.2:29812311-29812330	MS.gene045475:CDS	35.0%
	TACTCTGATGAATCCTTGTA+TGG	+	chr4.2:29811908-29811927	MS.gene045475:CDS	35.0%
	TAGAAGACGATTTCTTCTAG+TGG	-	chr4.2:29811642-29811661	None:intergenic	35.0%
	TGGAGATAGAGATATTGTTG+CGG	+	chr4.2:29811540-29811559	MS.gene045475:CDS	35.0%
	TTGTTAACGGTGTTTATCAC+TGG	+	chr4.2:29812119-29812138	MS.gene045475:CDS	35.0%
!	GATGAATCCTTGTATGGTTT+TGG	+	chr4.2:29811914-29811933	MS.gene045475:CDS	35.0%
!!	ATATGGACTCTGGAACAAAA+CGG	+	chr4.2:29812328-29812347	MS.gene045475:CDS	35.0%
!!	GTCACGATCAATTGATTTTG+TGG	+	chr4.2:29811828-29811847	MS.gene045475:CDS	35.0%
	AAATCCTTGTAGGCGAGTTT+GGG	+	chr4.2:29812425-29812444	MS.gene045475:CDS	40.0%
	AACAGCACCAAAACCATACA+AGG	-	chr4.2:29811924-29811943	None:intergenic	40.0%
	ACTTTCGCGATAACCAGTTT+CGG	+	chr4.2:29812188-29812207	MS.gene045475:CDS	40.0%
	CTCCTATTACTATGGTCACA+CGG	+	chr4.2:29812071-29812090	MS.gene045475:CDS	40.0%
	GATGGACATCTTTAGTTGTC+GGG	-	chr4.2:29811856-29811875	None:intergenic	40.0%
	GGGATATAGTGACCTAACTT+TGG	-	chr4.2:29812226-29812245	None:intergenic	40.0%
	TAGGTGTAGTATCGTTTGGT+TGG	+	chr4.2:29812303-29812322	MS.gene045475:CDS	40.0%
	TATCGCGAAAGTCAAAGCAA+AGG	-	chr4.2:29812180-29812199	None:intergenic	40.0%
	TCAATTCTTGCAACGTCTTG+AGG	-	chr4.2:29811749-29811768	None:intergenic	40.0%
	TGACCATAGTAATAGGAGGA+TGG	-	chr4.2:29812069-29812088	None:intergenic	40.0%
	TTGGTTGGAAATATGGACTC+TGG	+	chr4.2:29812318-29812337	MS.gene045475:CDS	40.0%
!	AAACGCGACAAAGATTTTGC+TGG	-	chr4.2:29811569-29811588	None:intergenic	40.0%
!	TCATGTTAGGTGCGTTTTGA+AGG	-	chr4.2:29811667-29811686	None:intergenic	40.0%
!!	TATGGACTCTGGAACAAAAC+GGG	+	chr4.2:29812329-29812348	MS.gene045475:CDS	40.0%
!!!	GACGGTGTTTTTTGTCTCAA+AGG	+	chr4.2:29811785-29811804	MS.gene045475:CDS	40.0%
	AGAGTAATGGTTACCGAGTG+AGG	-	chr4.2:29811894-29811913	None:intergenic	45.0%
	AGCCGTGTGACCATAGTAAT+AGG	-	chr4.2:29812076-29812095	None:intergenic	45.0%
	ATCGTGACGAGTTATGCATG+AGG	-	chr4.2:29811816-29811835	None:intergenic	45.0%
	CAGCCATCCTCCTATTACTA+TGG	+	chr4.2:29812063-29812082	MS.gene045475:CDS	45.0%
	CGTGTGACCATAGTAATAGG+AGG	-	chr4.2:29812073-29812092	None:intergenic	45.0%
	CTCACATCATGCGATCATCA+TGG	+	chr4.2:29812457-29812476	MS.gene045475:CDS	45.0%
	GAAATCCTTGTAGGCGAGTT+TGG	+	chr4.2:29812424-29812443	MS.gene045475:CDS	45.0%
	GAGTAATGGTTACCGAGTGA+GGG	-	chr4.2:29811893-29811912	None:intergenic	45.0%
	TTACGAGTATGTGCCAAGCA+TGG	+	chr4.2:29812534-29812553	MS.gene045475:CDS	45.0%
	TTTGACAATGGAGCCATGCT+TGG	-	chr4.2:29812550-29812569	None:intergenic	45.0%
!	AGGGAGCATGAGGAATAAGA+TGG	-	chr4.2:29811874-29811893	None:intergenic	45.0%
!	GATGGTGCTGAAATCCTTGT+AGG	+	chr4.2:29812415-29812434	MS.gene045475:CDS	45.0%
!!	GAGCTTCTAGTTTCCGAAAC+TGG	-	chr4.2:29812204-29812223	None:intergenic	45.0%
	AATAGGAGGATGGCTGACGA+GGG	-	chr4.2:29812059-29812078	None:intergenic	50.0%
	ATTCCTCATGCTCCCTCACT+CGG	+	chr4.2:29811878-29811897	MS.gene045475:CDS	50.0%
	TAATAGGAGGATGGCTGACG+AGG	-	chr4.2:29812060-29812079	None:intergenic	50.0%
!	CACTGGATTACGAGCTCTGA+TGG	+	chr4.2:29812136-29812155	MS.gene045475:CDS	50.0%
!!	GACTCTGGAACAAAACGGGT+GGG	+	chr4.2:29812333-29812352	MS.gene045475:CDS	50.0%
	ATAGGAGGATGGCTGACGAG+GGG	-	chr4.2:29812058-29812077	None:intergenic	55.0%
	TTGTAGGCGAGTTTGGGCAG+CGG	+	chr4.2:29812431-29812450	MS.gene045475:CDS	55.0%
!	TTACCGAGTGAGGGAGCATG+AGG	-	chr4.2:29811884-29811903	None:intergenic	55.0%
!!	GGACTCTGGAACAAAACGGG+TGG	+	chr4.2:29812332-29812351	MS.gene045475:CDS	55.0%
	GCTGCCCAAACTCGCCTACA+AGG	-	chr4.2:29812432-29812451	None:intergenic	60.0%
	TAGGAGGATGGCTGACGAGG+GGG	-	chr4.2:29812057-29812076	None:intergenic	60.0%
	AGGAGGATGGCTGACGAGGG+GGG	-	chr4.2:29812056-29812075	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	29811521	29812573	29811521	ID=MS.gene045475
chr4.2	mRNA	29811521	29812573	29811521	ID=MS.gene045475.t1;Parent=MS.gene045475
chr4.2	exon	29811521	29812573	29811521	ID=MS.gene045475.t1.exon1;Parent=MS.gene045475.t1
chr4.2	CDS	29811521	29812573	29811521	ID=cds.MS.gene045475.t1;Parent=MS.gene045475.t1

Gene Sequence

>MS.gene045475

ATGAAGCTTGGAGAATATTTGGAGATAGAGATATTGTTGCGGCTACCAGCAAAATCTTTGTCGCGTTTCAAATGTGTTCAAAAATCATGGAACAATATCATCAATAGTCCCTATTTTGCCACTAGAAGAAATCGTCTTCTAATCCTTCAAAACGCACCTAACATGAAGTTTATCTTTTGTGATGGAGGCAATGATCAGAAACCAATTCCCATCAAATCTTTGTTTCCTCAAGACGTTGCAAGAATTGAAATTTATGGTAGTTGCGACGGTGTTTTTTGTCTCAAAGGTATTTCCTCATGCATAACTCGTCACGATCAATTGATTTTGTGGAACCCGACAACTAAAGATGTCCATCTTATTCCTCATGCTCCCTCACTCGGTAACCATTACTCTGATGAATCCTTGTATGGTTTTGGTGCTGTTAACGACGACTTCAAAGTTGTCAAACTAAACATCTCTGATACTAATAGGATGGCGAAAATAAATTCTCTTTTGAAGGCGGACATTTATGATCTAAGCACAAAATCATGGACCCCCCTCGTCAGCCATCCTCCTATTACTATGGTCACACGGCTACAGCCTTCAAGATATAACACTCTTGTTAACGGTGTTTATCACTGGATTACGAGCTCTGATGGCTCTAATGCTGCACAAATCCTTTGCTTTGACTTTCGCGATAACCAGTTTCGGAAACTAGAAGCTCCAAAGTTAGGTCACTATATCCCCTTTTTCTGTGATGATGTCTTTGAGATAAAAGGTTATCTTGGTTATGTTGTGCAATATAGGTGTAGTATCGTTTGGTTGGAAATATGGACTCTGGAACAAAACGGGTGGGCCAAAAAGTATAACATTGATACAAAAATGTCAATTTTTCATATTTATGGTCTTTGGAATGATGGTGCTGAAATCCTTGTAGGCGAGTTTGGGCAGCGGCAGCTCACATCATGCGATCATCATGGAAACGTTCTTCGCCAATTTCAACTTGATACTTTAGAGAATGCTTGTTTTTGGTTTTACGAGTATGTGCCAAGCATGGCTCCATTGTCAAAGTAG

Protein sequence

>MS.gene045475.t1

MKLGEYLEIEILLRLPAKSLSRFKCVQKSWNNIINSPYFATRRNRLLILQNAPNMKFIFCDGGNDQKPIPIKSLFPQDVARIEIYGSCDGVFCLKGISSCITRHDQLILWNPTTKDVHLIPHAPSLGNHYSDESLYGFGAVNDDFKVVKLNISDTNRMAKINSLLKADIYDLSTKSWTPLVSHPPITMVTRLQPSRYNTLVNGVYHWITSSDGSNAAQILCFDFRDNQFRKLEAPKLGHYIPFFCDDVFEIKGYLGYVVQYRCSIVWLEIWTLEQNGWAKKYNIDTKMSIFHIYGLWNDGAEILVGEFGQRQLTSCDHHGNVLRQFQLDTLENACFWFYEYVPSMAPLSK