AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene044563


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044563.t1 MTR_3g103020 59.398 399 124 8 3 397 14 378 2.81e-151 432
MS.gene044563.t1 MTR_4g109270 59.305 403 116 10 3 397 2 364 3.65e-147 422
MS.gene044563.t1 MTR_3g034180 56.691 411 126 11 1 396 115 488 1.93e-136 399
MS.gene044563.t1 MTR_4g023090 55.243 391 141 10 9 392 16 379 1.03e-131 383
MS.gene044563.t1 MTR_4g109280 58.040 398 124 10 3 397 2 359 7.17e-131 380
MS.gene044563.t1 MTR_3g034160 55.474 411 131 11 1 396 1 374 1.33e-129 377
MS.gene044563.t1 MTR_3g034130 59.341 364 125 10 1 349 1 356 4.10e-129 376
MS.gene044563.t1 MTR_4g023080 53.634 399 136 9 1 396 1 353 1.36e-125 367
MS.gene044563.t1 MTR_4g117770 55.172 406 131 11 3 397 2 367 7.31e-125 365
MS.gene044563.t1 MTR_4g117810 55.172 406 131 11 3 397 2 367 7.31e-125 365
MS.gene044563.t1 MTR_4g122850 55.013 389 128 13 20 397 12 364 1.23e-124 365
MS.gene044563.t1 MTR_6g060650 55.970 402 126 11 9 396 8 372 7.72e-124 363
MS.gene044563.t1 MTR_4g021785 53.500 400 138 9 1 397 1 355 2.45e-122 358
MS.gene044563.t1 MTR_4g117780 54.523 398 133 12 8 397 10 367 2.62e-122 358
MS.gene044563.t1 MTR_4g117720 52.250 400 120 11 3 397 45 378 8.12e-121 355
MS.gene044563.t1 MTR_4g117850 54.822 394 130 11 9 394 23 376 1.06e-119 352
MS.gene044563.t1 MTR_4g094365 51.861 403 146 10 3 397 2 364 4.72e-119 350
MS.gene044563.t1 MTR_4g023070 50.732 410 141 12 7 396 1 369 1.55e-118 349
MS.gene044563.t1 MTR_4g023120 50.376 399 161 12 7 397 1 370 5.90e-115 340
MS.gene044563.t1 MTR_8g433040 50.248 404 145 10 1 397 10 364 1.39e-114 339
MS.gene044563.t1 MTR_8g032380 50.248 404 145 10 1 397 10 364 1.39e-114 339
MS.gene044563.t1 MTR_4g118380 56.267 359 123 10 9 342 8 357 2.70e-113 335
MS.gene044563.t1 MTR_5g070080 49.165 419 153 11 3 397 4 386 3.33e-112 333
MS.gene044563.t1 MTR_4g023380 49.403 419 127 12 9 397 16 379 3.45e-110 328
MS.gene044563.t1 MTR_4g116330 49.502 402 160 10 2 397 16 380 1.59e-109 327
MS.gene044563.t1 MTR_4g023190 51.000 400 145 12 2 395 3 357 8.16e-108 321
MS.gene044563.t1 MTR_5g097210 47.643 403 159 12 1 394 1 360 2.43e-105 315
MS.gene044563.t1 MTR_5g070130 48.000 400 164 10 9 397 11 377 5.02e-104 313
MS.gene044563.t1 MTR_4g023150 49.500 400 152 12 2 395 3 358 3.60e-102 307
MS.gene044563.t1 MTR_4g023130 47.368 399 120 9 1 396 1 312 5.80e-101 302
MS.gene044563.t1 MTR_4g023200 49.340 379 142 12 23 395 24 358 8.92e-101 303
MS.gene044563.t1 MTR_1g055135 47.816 412 163 13 1 397 1 375 1.56e-99 301
MS.gene044563.t1 MTR_4g023440 47.328 393 125 9 9 397 18 332 4.38e-99 298
MS.gene044563.t1 MTR_8g032390 46.923 390 142 11 9 392 40 370 3.14e-98 297
MS.gene044563.t1 MTR_5g070088 44.928 414 158 11 9 392 7 380 2.92e-96 293
MS.gene044563.t1 MTR_4g121580 46.565 393 161 11 9 388 11 367 1.51e-93 286
MS.gene044563.t1 MTR_8g013010 58.423 279 97 9 3 274 48 314 4.44e-92 280
MS.gene044563.t1 MTR_4g117750 46.667 405 154 13 7 396 1 358 1.28e-91 284
MS.gene044563.t1 MTR_4g117750 47.445 137 44 2 259 395 373 481 1.36e-28 117
MS.gene044563.t1 MTR_1g055165 44.250 400 135 11 2 397 3 318 2.37e-90 275
MS.gene044563.t1 MTR_4g116330 44.500 400 144 10 2 397 16 341 3.73e-86 265
MS.gene044563.t1 MTR_4g117870 45.562 338 112 7 61 397 1 267 5.63e-84 257
MS.gene044563.t1 MTR_8g433030 43.928 387 125 11 9 392 40 337 2.49e-82 255
MS.gene044563.t1 MTR_1g055195 43.804 347 135 12 62 397 181 478 1.32e-70 229
MS.gene044563.t1 MTR_4g118400 45.938 320 104 11 80 391 36 294 1.39e-67 216
MS.gene044563.t1 MTR_8g040935 50.633 237 87 3 162 397 1 208 1.60e-63 202
MS.gene044563.t1 MTR_4g117430 65.854 164 44 4 107 270 3 154 2.26e-63 200
MS.gene044563.t1 MTR_7g079400 41.329 346 157 14 64 397 26 337 3.34e-61 201
MS.gene044563.t1 MTR_7g079370 38.933 375 168 18 38 391 16 350 2.12e-60 199
MS.gene044563.t1 MTR_2g048580 36.207 406 183 19 3 397 2 342 2.71e-57 191
MS.gene044563.t1 MTR_8g102520 35.443 395 169 13 9 397 8 322 2.83e-57 190
MS.gene044563.t1 MTR_4g116320 47.967 246 91 6 151 393 43 254 1.46e-56 186
MS.gene044563.t1 MTR_4g116340 49.356 233 84 9 12 234 39 247 1.14e-54 181
MS.gene044563.t1 MTR_4g118370 41.577 279 104 8 119 393 33 256 1.70e-54 181
MS.gene044563.t1 MTR_4g117530 38.854 314 107 9 89 397 20 253 2.35e-54 181
MS.gene044563.t1 MTR_6g463430 44.167 240 92 8 162 397 1 202 9.03e-49 164
MS.gene044563.t1 MTR_1g055175 43.421 228 90 9 174 397 9 201 4.97e-46 157
MS.gene044563.t1 MTR_4g114700 41.221 262 92 8 107 361 9 215 8.26e-45 155
MS.gene044563.t1 MTR_1g055250 43.939 198 101 7 146 340 49 239 1.28e-41 149
MS.gene044563.t1 MTR_4g109290 49.704 169 44 3 1 162 1 135 1.37e-40 142
MS.gene044563.t1 MTR_7g117720 48.744 199 70 9 1 188 1 178 2.81e-40 144
MS.gene044563.t1 MTR_7g117720 42.857 112 38 2 282 392 186 272 6.08e-15 74.7
MS.gene044563.t1 MTR_7g079420 34.426 305 122 13 106 397 905 1144 4.24e-38 146
MS.gene044563.t1 MTR_5g069120 45.098 153 70 4 19 160 1 150 2.84e-33 123
MS.gene044563.t1 MTR_4g118360 49.359 156 47 7 244 397 1 126 1.22e-31 117
MS.gene044563.t1 MTR_8g098830 43.182 176 89 7 170 342 31 198 1.06e-30 117
MS.gene044563.t1 MTR_5g057790 31.356 354 204 13 9 350 46 372 1.35e-30 121
MS.gene044563.t1 MTR_1g068875 29.341 334 203 11 8 325 3 319 3.41e-29 117
MS.gene044563.t1 MTR_5g057690 30.199 351 202 13 9 350 46 362 5.67e-29 116
MS.gene044563.t1 MTR_2g021150 29.003 331 200 13 9 320 14 328 1.09e-28 115
MS.gene044563.t1 MTR_4g122860 33.852 257 100 7 145 397 130 320 1.64e-28 114
MS.gene044563.t1 MTR_4g122860 52.500 80 37 1 9 87 70 149 4.61e-13 70.1
MS.gene044563.t1 MTR_5g057710 31.161 353 207 14 9 350 46 373 2.53e-28 115
MS.gene044563.t1 MTR_1g094210 28.011 357 209 14 1 338 49 376 3.22e-28 115
MS.gene044563.t1 MTR_2g426020 28.612 353 210 12 9 334 6 343 7.66e-28 114
MS.gene044563.t1 MTR_5g023000 47.541 122 36 1 276 397 6 99 8.21e-28 105
MS.gene044563.t1 MTR_1g094210 27.920 351 205 14 1 332 49 370 2.49e-27 112
MS.gene044563.t1 MTR_2g028160 29.050 358 209 14 8 330 4 351 3.81e-27 112
MS.gene044563.t1 MTR_5g057020 32.143 308 171 13 9 308 46 323 3.07e-26 108
MS.gene044563.t1 MTR_4g133170 27.164 335 210 9 8 326 3 319 4.04e-26 108
MS.gene044563.t1 MTR_3g007360 30.114 352 208 16 12 347 55 384 4.08e-26 108
MS.gene044563.t1 MTR_5g022420 27.954 347 211 15 9 344 27 345 1.72e-25 107
MS.gene044563.t1 MTR_3g007410 30.606 330 188 16 12 323 55 361 2.23e-25 107
MS.gene044563.t1 MTR_2g024110 27.566 341 205 15 8 325 3 324 3.40e-25 105
MS.gene044563.t1 MTR_3g036290 31.250 352 196 18 9 344 22 343 3.85e-25 105
MS.gene044563.t1 MTR_1g097330 29.518 332 188 14 9 320 16 321 4.13e-25 106
MS.gene044563.t1 MTR_1g068835 28.664 307 187 9 8 299 3 292 5.91e-25 105
MS.gene044563.t1 MTR_4g055060 30.547 311 178 10 9 299 30 322 8.56e-25 105
MS.gene044563.t1 MTR_3g007330 30.619 307 181 10 9 304 48 333 1.12e-24 104
MS.gene044563.t1 MTR_2g028130 29.023 348 194 15 8 317 4 336 1.66e-24 104
MS.gene044563.t1 MTR_0667s0010 26.590 346 207 10 9 324 6 334 1.67e-24 104
MS.gene044563.t1 MTR_3g006670 29.179 329 200 11 9 323 49 358 8.02e-24 102
MS.gene044563.t1 MTR_2g025420 26.359 368 216 10 9 334 6 360 1.74e-23 101
MS.gene044563.t1 MTR_2g055970 24.286 350 250 7 9 351 211 552 2.31e-23 102
MS.gene044563.t1 MTR_3g013740 28.698 338 170 16 9 306 44 350 2.57e-23 101
MS.gene044563.t1 MTR_4g107820 26.398 322 201 11 4 312 31 329 2.88e-23 100
MS.gene044563.t1 MTR_4g107780 26.398 322 201 11 4 312 31 329 2.88e-23 100
MS.gene044563.t1 MTR_6g034720 45.652 138 60 5 130 258 53 184 3.42e-23 97.1
MS.gene044563.t1 MTR_4g107780 26.398 322 201 11 4 312 31 329 3.50e-23 100
MS.gene044563.t1 MTR_4g107820 26.398 322 201 11 4 312 31 329 3.85e-23 100
MS.gene044563.t1 MTR_4g061340 30.000 320 176 13 9 305 26 320 4.38e-23 100
MS.gene044563.t1 MTR_7g070830 27.248 367 200 14 9 320 21 375 7.85e-23 99.8
MS.gene044563.t1 MTR_7g070880 26.757 370 198 15 9 320 21 375 8.64e-23 99.8
MS.gene044563.t1 MTR_8g467140 26.821 302 193 9 9 298 32 317 9.56e-23 98.2
MS.gene044563.t1 MTR_2g028140 28.440 327 181 13 8 294 4 317 2.65e-22 98.2
MS.gene044563.t1 MTR_2g021050 29.191 346 183 15 8 325 4 315 4.47e-22 97.1
MS.gene044563.t1 MTR_4g023430 55.914 93 35 2 2 91 34 123 6.64e-22 93.6
MS.gene044563.t1 MTR_4g023430 33.562 146 57 4 255 397 114 222 3.40e-13 68.9
MS.gene044563.t1 MTR_2g426060 29.143 350 201 14 9 325 6 341 6.68e-22 97.1
MS.gene044563.t1 MTR_1g068860 27.597 308 193 8 7 299 2 294 8.54e-22 96.3
MS.gene044563.t1 MTR_2g426090 27.410 332 206 10 12 317 9 331 1.04e-21 96.7
MS.gene044563.t1 MTR_2g426070 27.895 380 215 15 10 349 7 367 1.20e-21 96.3
MS.gene044563.t1 MTR_1g056710 27.687 307 189 13 2 294 27 314 1.53e-21 95.9
MS.gene044563.t1 MTR_8g101580 26.220 328 218 10 3 320 39 352 1.87e-21 95.5
MS.gene044563.t1 MTR_2g078900 28.618 304 184 12 9 300 33 315 1.92e-21 95.1
MS.gene044563.t1 MTR_5g011200 28.808 302 182 12 9 294 17 301 2.08e-21 95.1
MS.gene044563.t1 MTR_4g070550 28.235 340 186 15 8 306 4 326 3.42e-21 94.7
MS.gene044563.t1 MTR_6g090180 25.287 435 239 13 2 390 40 434 3.86e-21 95.1
MS.gene044563.t1 MTR_7g070440 29.664 327 175 16 12 306 10 313 4.39e-21 94.4
MS.gene044563.t1 MTR_3g014570 27.848 316 191 11 9 307 29 324 4.58e-21 94.4
MS.gene044563.t1 MTR_1g054725 25.634 355 226 11 9 347 20 352 4.80e-21 94.0
MS.gene044563.t1 MTR_8g099460 27.389 314 191 8 7 298 3 301 6.91e-21 94.0
MS.gene044563.t1 MTR_3g030250 25.879 398 223 16 9 389 37 379 8.44e-21 93.6
MS.gene044563.t1 MTR_3g007430 29.934 304 167 13 12 294 46 324 8.52e-21 93.6
MS.gene044563.t1 MTR_5g096630 25.000 404 242 12 1 354 10 402 9.37e-21 93.6
MS.gene044563.t1 MTR_3g010970 26.209 393 223 17 12 389 51 391 1.22e-20 93.2
MS.gene044563.t1 MTR_3g010620 25.064 391 243 15 12 389 39 392 2.95e-20 92.0
MS.gene044563.t1 MTR_0044s0300 26.700 397 230 18 9 389 38 389 2.95e-20 92.0
MS.gene044563.t1 MTR_3g083010 28.415 366 210 14 9 334 6 359 3.12e-20 92.0
MS.gene044563.t1 MTR_2g046900 25.360 347 231 11 9 337 28 364 4.21e-20 91.7
MS.gene044563.t1 MTR_4g129190 25.978 358 205 14 7 320 4 345 4.57e-20 91.3
MS.gene044563.t1 MTR_5g046300 27.090 299 194 10 9 300 4 285 4.70e-20 90.9
MS.gene044563.t1 MTR_5g046290 27.090 299 194 10 9 300 4 285 4.70e-20 90.9
MS.gene044563.t1 MTR_7g057270 27.844 334 196 14 9 308 26 348 5.19e-20 91.7
MS.gene044563.t1 MTR_1g097490 27.874 348 220 13 9 345 49 376 6.24e-20 90.9
MS.gene044563.t1 MTR_2g028110 27.729 339 203 12 8 323 3 322 7.18e-20 90.9
MS.gene044563.t1 MTR_7g407070 28.701 331 198 13 1 304 24 343 8.66e-20 90.9
MS.gene044563.t1 MTR_7g062100 26.963 382 223 14 9 356 24 383 1.13e-19 90.5
MS.gene044563.t1 MTR_3g011100 27.987 318 198 9 9 310 235 537 1.30e-19 91.3
MS.gene044563.t1 MTR_3g007270 27.673 318 183 11 9 299 47 344 1.49e-19 90.1
MS.gene044563.t1 MTR_3g014540 28.435 313 189 12 9 305 29 322 1.61e-19 89.7
MS.gene044563.t1 MTR_2g031680 27.213 305 189 9 9 298 6 292 1.61e-19 89.7
MS.gene044563.t1 MTR_2g021190 29.431 299 183 10 9 294 21 304 1.61e-19 89.7
MS.gene044563.t1 MTR_3g010390 27.476 313 196 12 9 299 33 336 1.86e-19 89.7
MS.gene044563.t1 MTR_3g009260 28.620 297 184 11 12 300 44 320 1.88e-19 89.7
MS.gene044563.t1 MTR_3g083640 27.124 306 173 10 9 294 55 330 1.93e-19 89.7
MS.gene044563.t1 MTR_7g055870 25.980 408 219 13 9 345 13 408 2.03e-19 89.7
MS.gene044563.t1 MTR_0128s0070 29.721 323 168 17 7 294 20 318 2.05e-19 89.7
MS.gene044563.t1 MTR_7g079450 35.882 170 74 5 229 397 2 137 2.08e-19 84.3
MS.gene044563.t1 MTR_7g055930 25.980 408 219 14 9 345 13 408 2.18e-19 89.7
MS.gene044563.t1 MTR_4g130330 27.177 379 226 14 4 344 2 368 2.45e-19 89.4
MS.gene044563.t1 MTR_0760s0010 29.795 292 173 13 14 296 52 320 2.75e-19 89.4
MS.gene044563.t1 MTR_0128s0020 27.390 387 209 20 9 347 18 380 2.76e-19 89.4
MS.gene044563.t1 MTR_6g053260 26.142 394 249 12 8 389 336 699 3.04e-19 90.1
MS.gene044563.t1 MTR_6g086825 26.302 384 230 14 9 349 70 443 3.21e-19 89.4
MS.gene044563.t1 MTR_6g065980 28.912 294 178 12 9 296 16 284 3.75e-19 88.6
MS.gene044563.t1 MTR_2g025960 28.571 252 144 7 100 324 1 243 3.91e-19 87.8
MS.gene044563.t1 MTR_2g046920 26.471 306 197 10 9 303 24 312 5.78e-19 88.2
MS.gene044563.t1 MTR_3g010590 28.283 297 177 12 9 296 39 308 6.77e-19 87.8
MS.gene044563.t1 MTR_3g009240 27.762 353 219 14 9 350 36 363 7.89e-19 87.8
MS.gene044563.t1 MTR_4g013180 27.473 364 228 12 9 340 11 370 8.68e-19 88.2
MS.gene044563.t1 MTR_7g007300 27.687 307 174 13 4 294 100 374 9.07e-19 88.2
MS.gene044563.t1 MTR_7g077970 29.532 342 191 15 9 309 7 339 1.09e-18 87.8
MS.gene044563.t1 MTR_2g026010 27.761 335 214 11 8 325 3 326 1.15e-18 87.4
MS.gene044563.t1 MTR_2g021155 29.180 305 190 11 1 294 28 317 1.17e-18 88.6
MS.gene044563.t1 MTR_2g021252 25.926 297 176 10 12 294 50 316 1.19e-18 87.4
MS.gene044563.t1 MTR_3g030350 28.094 299 193 10 9 300 35 318 1.58e-18 87.0
MS.gene044563.t1 MTR_3g013770 28.247 308 178 13 9 294 33 319 2.27e-18 86.7
MS.gene044563.t1 MTR_7g078900 27.865 384 202 16 11 338 14 378 2.53e-18 86.7
MS.gene044563.t1 MTR_3g010430 24.812 399 240 11 9 389 36 392 2.71e-18 86.7
MS.gene044563.t1 MTR_2g031720 27.198 364 210 12 9 341 6 345 2.82e-18 86.3
MS.gene044563.t1 MTR_5g046260 25.424 295 174 11 9 300 4 255 3.61e-18 84.7
MS.gene044563.t1 MTR_7g066100 27.190 331 194 12 9 303 11 330 3.96e-18 85.9
MS.gene044563.t1 MTR_5g007610 26.667 330 188 13 1 300 33 338 4.52e-18 85.9
MS.gene044563.t1 MTR_5g069930 25.634 355 203 14 5 320 2 334 4.84e-18 85.5
MS.gene044563.t1 MTR_5g096710 30.149 335 174 14 9 307 23 333 5.22e-18 85.5
MS.gene044563.t1 MTR_5g069760 24.412 340 211 11 9 320 6 327 5.62e-18 85.1
MS.gene044563.t1 MTR_2g031640 27.003 337 204 12 9 323 6 322 7.08e-18 85.1
MS.gene044563.t1 MTR_6g027910 27.301 326 185 14 1 294 1 306 7.18e-18 84.7
MS.gene044563.t1 MTR_3g009310 28.896 308 180 13 9 299 42 327 7.29e-18 85.1
MS.gene044563.t1 MTR_1g055070 27.536 276 158 12 2 248 42 304 8.23e-18 84.7
MS.gene044563.t1 MTR_4g037465 27.415 383 211 18 9 347 21 380 1.24e-17 84.3
MS.gene044563.t1 MTR_5g021860 25.414 362 194 12 8 306 29 377 1.25e-17 85.1
MS.gene044563.t1 MTR_0097s0030 27.273 363 176 16 7 320 12 335 1.29e-17 84.3
MS.gene044563.t1 MTR_2g047240 27.273 363 176 16 7 320 12 335 1.29e-17 84.3
MS.gene044563.t1 MTR_5g009060 30.120 332 176 18 9 298 25 342 1.31e-17 84.3
MS.gene044563.t1 MTR_6g053240 24.311 399 255 12 8 389 27 395 1.38e-17 84.3
MS.gene044563.t1 MTR_3g010870 27.907 301 176 13 9 294 37 311 1.41e-17 84.0
MS.gene044563.t1 MTR_2g461450 26.786 336 199 13 9 320 18 330 1.55e-17 83.6
MS.gene044563.t1 MTR_4g080200 28.479 309 175 14 7 296 1 282 1.99e-17 83.2
MS.gene044563.t1 MTR_5g021860 25.414 362 194 12 8 306 29 377 1.99e-17 84.0
MS.gene044563.t1 MTR_1g115160 26.780 295 188 12 7 294 20 293 2.11e-17 83.6
MS.gene044563.t1 MTR_2g425980 27.414 321 191 11 8 298 4 312 2.15e-17 83.6
MS.gene044563.t1 MTR_2g022000 24.130 431 251 18 9 382 16 427 2.15e-17 84.0
MS.gene044563.t1 MTR_3g036335 25.240 313 202 12 9 307 41 335 2.20e-17 83.6
MS.gene044563.t1 MTR_3g006570 27.723 303 184 14 9 296 21 303 2.27e-17 83.6
MS.gene044563.t1 MTR_6g021880 28.438 320 180 14 20 311 31 329 2.35e-17 83.2
MS.gene044563.t1 MTR_2g021770 27.930 401 227 16 1 351 4 392 2.64e-17 83.6
MS.gene044563.t1 MTR_5g057643 30.942 223 134 7 9 221 46 258 2.94e-17 81.6
MS.gene044563.t1 MTR_7g017040 26.790 377 217 14 9 343 16 375 4.16e-17 82.8
MS.gene044563.t1 MTR_7g078860 27.446 368 219 13 1 331 1 357 4.36e-17 82.8
MS.gene044563.t1 MTR_4g102410 23.618 398 244 14 3 354 55 438 4.52e-17 83.2
MS.gene044563.t1 MTR_7g028660 27.679 336 191 14 9 311 11 327 5.37e-17 82.4
MS.gene044563.t1 MTR_0064s0160 26.994 326 189 14 9 296 42 356 5.54e-17 82.8
MS.gene044563.t1 MTR_5g069390 25.464 377 223 15 9 339 26 390 5.67e-17 82.8
MS.gene044563.t1 MTR_7g078040 28.169 355 188 14 9 309 9 350 8.63e-17 82.0
MS.gene044563.t1 MTR_1g097560 25.926 351 204 20 9 337 36 352 8.70e-17 81.6
MS.gene044563.t1 MTR_4g030830 26.648 364 208 12 1 320 1 349 9.35e-17 81.6
MS.gene044563.t1 MTR_2g021210 26.689 296 184 10 9 294 84 356 9.46e-17 82.0
MS.gene044563.t1 MTR_3g036430 27.729 339 189 16 9 334 20 315 1.03e-16 81.3
MS.gene044563.t1 MTR_7g445890 27.119 354 186 17 9 320 16 339 1.13e-16 81.3
MS.gene044563.t1 MTR_0115s0020 25.962 416 246 17 8 390 9 395 1.13e-16 81.6
MS.gene044563.t1 MTR_7g078840 28.977 352 188 16 9 307 10 352 1.30e-16 81.6
MS.gene044563.t1 MTR_7g017130 26.221 389 203 16 8 343 17 374 1.37e-16 81.3
MS.gene044563.t1 MTR_2g038680 23.785 391 235 12 8 348 15 392 1.38e-16 81.3
MS.gene044563.t1 MTR_1g088120 27.606 355 206 14 12 326 13 356 1.42e-16 81.3
MS.gene044563.t1 MTR_2g031700 27.059 255 152 7 9 253 6 236 1.45e-16 80.1
MS.gene044563.t1 MTR_7g069550 27.764 407 189 21 2 341 7 375 1.47e-16 81.3
MS.gene044563.t1 MTR_1g050542 22.742 299 211 6 9 303 58 340 1.50e-16 81.3
MS.gene044563.t1 MTR_1g068905 27.309 249 144 6 8 248 3 222 1.51e-16 80.1
MS.gene044563.t1 MTR_2g029990 27.365 296 191 11 10 294 52 334 1.69e-16 80.9
MS.gene044563.t1 MTR_7g079640 27.027 370 224 15 1 344 5 354 1.80e-16 80.9
MS.gene044563.t1 MTR_4g031770 25.828 302 188 9 9 294 4 285 2.12e-16 80.5
MS.gene044563.t1 MTR_5g048160 27.523 327 191 14 8 296 3 321 2.21e-16 80.5
MS.gene044563.t1 MTR_4g024890 25.634 355 217 16 10 329 11 353 2.34e-16 80.5
MS.gene044563.t1 MTR_6g007135 26.471 306 202 9 9 300 26 322 2.35e-16 80.5
MS.gene044563.t1 MTR_8g073550 30.890 191 118 5 9 189 30 216 2.63e-16 78.2
MS.gene044563.t1 MTR_3g436150 28.931 318 192 12 9 304 32 337 2.94e-16 80.1
MS.gene044563.t1 MTR_2g024100 27.532 316 179 13 11 294 9 306 5.51e-16 79.3
MS.gene044563.t1 MTR_3g011060 25.545 321 188 10 9 300 28 326 5.89e-16 79.3
MS.gene044563.t1 MTR_6g004660 27.885 312 198 11 9 302 16 318 6.20e-16 79.0
MS.gene044563.t1 MTR_1g007450 23.907 389 237 15 2 347 5 377 6.83e-16 79.3
MS.gene044563.t1 MTR_7g017170 25.964 389 204 16 8 343 17 374 7.79e-16 79.0
MS.gene044563.t1 MTR_3g024150 27.687 307 170 13 12 296 38 314 1.02e-15 78.6
MS.gene044563.t1 MTR_5g008530 64.912 57 19 1 7 62 16 72 1.31e-15 71.6
MS.gene044563.t1 MTR_7g013590 29.773 309 176 13 12 300 39 326 1.48e-15 78.2
MS.gene044563.t1 MTR_1g055375 25.084 299 195 9 12 294 7 292 1.48e-15 77.8
MS.gene044563.t1 MTR_0242s0060 28.161 348 184 16 9 309 9 337 1.50e-15 78.2
MS.gene044563.t1 MTR_0242s0040 28.161 348 184 16 9 309 9 337 1.50e-15 78.2
MS.gene044563.t1 MTR_5g057040 31.915 188 117 5 9 188 46 230 1.59e-15 79.0
MS.gene044563.t1 MTR_1g054575 24.522 314 189 9 9 303 52 336 2.01e-15 78.6
MS.gene044563.t1 MTR_1g055145 52.222 90 38 3 19 105 43 130 2.79e-15 75.9
MS.gene044563.t1 MTR_3g010520 26.490 302 174 15 9 298 25 290 2.92e-15 77.0
MS.gene044563.t1 MTR_7g056503 23.622 381 252 13 9 362 21 389 3.26e-15 77.0
MS.gene044563.t1 MTR_4g014370 23.980 392 229 16 9 345 11 388 3.73e-15 77.0
MS.gene044563.t1 MTR_1g037540 25.995 377 220 19 12 339 8 374 3.81e-15 77.0
MS.gene044563.t1 MTR_3g023930 27.986 293 176 11 9 296 34 296 3.86e-15 76.6
MS.gene044563.t1 MTR_6g079810 24.752 404 232 16 2 351 63 448 4.20e-15 77.0
MS.gene044563.t1 MTR_3g058470 26.647 334 182 13 8 320 36 327 4.35e-15 76.6
MS.gene044563.t1 MTR_3g011020 27.469 324 175 13 9 308 28 315 4.88e-15 76.3
MS.gene044563.t1 MTR_8g464770 26.730 318 191 12 9 298 12 315 6.06e-15 76.3
MS.gene044563.t1 MTR_3g011650 32.044 181 113 5 12 187 82 257 7.30e-15 74.7
MS.gene044563.t1 MTR_3g024110 24.112 394 239 13 9 389 101 447 7.94e-15 76.3
MS.gene044563.t1 MTR_8g063440 22.678 366 241 13 9 346 12 363 9.03e-15 75.5
MS.gene044563.t1 MTR_7g061050 26.687 326 194 11 9 307 13 320 9.51e-15 75.5
MS.gene044563.t1 MTR_7g062060 25.434 346 199 12 9 309 12 343 1.07e-14 75.5
MS.gene044563.t1 MTR_7g067680 26.299 308 160 10 9 294 49 311 1.17e-14 75.5
MS.gene044563.t1 MTR_6g034830 40.708 113 55 3 1 113 12 112 1.17e-14 70.5
MS.gene044563.t1 MTR_6g017280 25.714 350 208 14 9 320 9 344 1.20e-14 75.5
MS.gene044563.t1 MTR_6g048120 24.515 412 256 12 1 389 28 407 1.55e-14 75.1
MS.gene044563.t1 MTR_4g028660 22.248 427 240 14 9 390 16 395 1.63e-14 75.1
MS.gene044563.t1 MTR_4g027450 22.248 427 240 14 9 390 16 395 1.63e-14 75.1
MS.gene044563.t1 MTR_5g068040 25.868 317 189 11 12 306 19 311 1.73e-14 74.7
MS.gene044563.t1 MTR_2g078850 26.821 302 189 12 12 300 33 315 1.83e-14 74.7
MS.gene044563.t1 MTR_2g104340 26.276 392 227 17 2 351 7 378 1.94e-14 74.7
MS.gene044563.t1 MTR_7g061060 26.377 345 206 12 9 320 13 342 1.95e-14 74.7
MS.gene044563.t1 MTR_4g028510 22.170 424 245 15 12 392 19 400 2.21e-14 74.7
MS.gene044563.t1 MTR_3g024040 26.421 299 190 13 16 307 38 313 2.27e-14 74.3
MS.gene044563.t1 MTR_3g007300 28.247 308 167 13 9 308 49 310 2.55e-14 74.3
MS.gene044563.t1 MTR_1g112930 26.578 301 179 15 9 293 25 299 2.58e-14 74.3
MS.gene044563.t1 MTR_5g097350 25.069 363 215 15 18 344 25 366 2.72e-14 74.3
MS.gene044563.t1 MTR_0267s0050 24.490 343 215 13 12 320 9 341 3.22e-14 73.9
MS.gene044563.t1 MTR_2g047832 25.688 327 193 11 9 303 29 337 3.42e-14 73.9
MS.gene044563.t1 MTR_6g055210 28.173 323 179 14 9 293 22 329 3.57e-14 74.3
MS.gene044563.t1 MTR_1g442850 27.528 356 183 19 12 320 8 335 4.01e-14 73.6
MS.gene044563.t1 MTR_5g056020 27.219 338 180 14 9 294 17 340 4.84e-14 73.9
MS.gene044563.t1 MTR_3g464500 25.496 353 212 11 9 325 27 364 4.93e-14 73.6
MS.gene044563.t1 MTR_3g058480 30.112 269 151 12 8 255 38 290 4.93e-14 72.8
MS.gene044563.t1 MTR_2g046830 26.129 310 187 13 12 303 28 313 5.00e-14 73.6
MS.gene044563.t1 MTR_3g013950 23.563 348 214 12 12 320 9 343 5.62e-14 73.2
MS.gene044563.t1 MTR_6g016285 24.359 390 233 13 9 345 21 401 5.76e-14 73.6
MS.gene044563.t1 MTR_5g023570 38.739 111 52 4 9 113 37 137 5.81e-14 69.3
MS.gene044563.t1 MTR_7g060960 26.667 315 168 12 9 303 32 303 6.18e-14 73.2
MS.gene044563.t1 MTR_8g013005 55.357 56 25 0 342 397 4 59 7.01e-14 66.2
MS.gene044563.t1 MTR_3g030330 26.582 395 233 18 9 389 20 371 7.34e-14 72.8
MS.gene044563.t1 MTR_4g013175 28.232 379 182 15 12 320 13 371 7.68e-14 73.2
MS.gene044563.t1 MTR_2g010920 23.678 397 245 15 1 347 12 400 8.08e-14 73.2
MS.gene044563.t1 MTR_8g062660 26.586 331 162 14 9 298 22 312 8.69e-14 73.6
MS.gene044563.t1 MTR_4g033495 24.167 360 214 15 9 325 27 370 9.33e-14 72.8
MS.gene044563.t1 MTR_1g055200 46.914 81 38 2 103 180 5 83 1.06e-13 67.4
MS.gene044563.t1 MTR_3g006530 23.642 313 196 11 9 300 40 330 1.31e-13 72.4
MS.gene044563.t1 MTR_3g058440 29.536 237 134 10 8 224 34 257 1.49e-13 71.2
MS.gene044563.t1 MTR_7g050520 26.480 321 171 12 9 294 22 312 2.26e-13 71.6
MS.gene044563.t1 MTR_3g010920 27.517 298 177 14 9 298 44 310 2.42e-13 71.2
MS.gene044563.t1 MTR_4g030090 25.387 323 199 11 10 303 15 324 2.52e-13 71.2
MS.gene044563.t1 MTR_7g056760 24.642 349 216 12 9 320 23 361 2.62e-13 71.2
MS.gene044563.t1 MTR_7g050480 26.791 321 170 12 9 294 22 312 2.72e-13 71.2
MS.gene044563.t1 MTR_3g009250 31.492 181 113 5 12 187 44 218 2.88e-13 69.3
MS.gene044563.t1 MTR_3g006500 25.633 316 193 12 1 298 9 300 2.99e-13 70.9
MS.gene044563.t1 MTR_7g056737 27.246 334 178 15 5 303 18 321 4.22e-13 70.9
MS.gene044563.t1 MTR_2g046800 27.711 332 172 16 9 294 14 323 4.90e-13 70.5
MS.gene044563.t1 MTR_7g060940 26.829 369 196 17 3 325 16 356 5.03e-13 70.5
MS.gene044563.t1 MTR_7g055987 27.089 347 179 17 12 318 23 335 6.70e-13 69.7
MS.gene044563.t1 MTR_7g061090 25.648 347 186 16 9 307 22 344 7.86e-13 69.7
MS.gene044563.t1 MTR_7g056710 25.656 343 205 15 9 320 18 341 8.65e-13 69.7
MS.gene044563.t1 MTR_7g077990 24.148 352 217 11 9 330 17 348 8.97e-13 69.7
MS.gene044563.t1 MTR_7g066850 25.203 369 217 15 9 338 23 371 9.23e-13 69.7
MS.gene044563.t1 MTR_7g035295 25.762 361 179 16 9 320 16 336 1.12e-12 69.3
MS.gene044563.t1 MTR_4g030110 26.269 335 180 14 9 312 30 328 1.34e-12 68.9
MS.gene044563.t1 MTR_6g017270 29.592 196 115 9 12 188 12 203 1.44e-12 68.6
MS.gene044563.t1 MTR_2g104280 25.000 432 234 18 9 392 14 403 1.46e-12 68.9
MS.gene044563.t1 MTR_4g013185 27.419 372 194 16 12 320 13 371 1.67e-12 68.9
MS.gene044563.t1 MTR_1g055055 25.649 308 183 9 9 304 26 299 1.87e-12 68.2
MS.gene044563.t1 MTR_6g013270 25.392 319 198 11 9 308 29 326 1.95e-12 68.6
MS.gene044563.t1 MTR_3g096280 25.510 294 165 11 21 298 17 272 2.32e-12 68.2
MS.gene044563.t1 MTR_6g461660 25.301 332 190 14 12 300 22 338 2.87e-12 68.2
MS.gene044563.t1 MTR_1g071010 23.729 236 162 8 10 233 16 245 2.91e-12 68.2
MS.gene044563.t1 MTR_6g048140 29.653 317 160 17 9 294 39 323 3.43e-12 67.8
MS.gene044563.t1 MTR_7g056003 27.500 360 190 18 12 320 18 357 4.05e-12 67.8
MS.gene044563.t1 MTR_7g091630 24.159 327 206 12 9 303 32 348 4.95e-12 67.4
MS.gene044563.t1 MTR_7g055977 25.424 354 200 15 9 320 7 338 5.16e-12 67.4
MS.gene044563.t1 MTR_7g037670 28.333 240 140 11 9 237 23 241 5.17e-12 67.0
MS.gene044563.t1 MTR_7g016930 25.697 323 171 13 9 295 16 305 5.31e-12 67.0
MS.gene044563.t1 MTR_3g464470 22.946 353 218 9 9 325 7 341 6.04e-12 67.0
MS.gene044563.t1 MTR_5g072060 27.642 369 212 20 5 341 2 347 1.01e-11 67.0
MS.gene044563.t1 MTR_7g056200 24.348 345 196 12 9 320 23 335 1.11e-11 66.2
MS.gene044563.t1 MTR_4g028750 24.806 387 228 14 2 344 9 376 1.11e-11 66.2
MS.gene044563.t1 MTR_3g010440 31.852 135 86 3 9 137 26 160 1.29e-11 65.9
MS.gene044563.t1 MTR_4g019990 23.410 346 196 13 9 311 6 325 1.42e-11 65.9
MS.gene044563.t1 MTR_6g004210 25.316 316 190 12 20 300 36 340 1.63e-11 65.9
MS.gene044563.t1 MTR_7g056717 27.469 324 172 17 14 303 27 321 1.73e-11 65.5
MS.gene044563.t1 MTR_7g077910 28.947 228 127 10 102 307 42 256 2.35e-11 65.1
MS.gene044563.t1 MTR_7g091640 26.970 330 189 15 9 303 35 347 2.41e-11 65.1
MS.gene044563.t1 MTR_4g006270 24.855 346 207 15 8 334 3 314 2.61e-11 65.1
MS.gene044563.t1 MTR_0649s0020 25.776 322 181 15 9 293 11 311 2.72e-11 65.1
MS.gene044563.t1 MTR_7g055850 27.803 223 121 7 9 194 13 232 2.91e-11 64.3
MS.gene044563.t1 MTR_6g478230 24.211 380 227 14 12 349 30 390 3.52e-11 64.7
MS.gene044563.t1 MTR_3g010870 27.027 222 129 8 9 217 37 238 3.81e-11 64.3
MS.gene044563.t1 MTR_7g066030 24.090 357 209 15 9 320 21 360 4.44e-11 64.3
MS.gene044563.t1 MTR_3g030310 26.198 313 189 15 9 300 21 312 4.60e-11 64.3
MS.gene044563.t1 MTR_2g010900 23.453 307 205 10 27 307 1 303 4.63e-11 64.3
MS.gene044563.t1 MTR_4g030760 27.805 205 114 7 3 188 67 256 4.77e-11 64.3
MS.gene044563.t1 MTR_5g094350 26.715 277 151 12 12 252 16 276 6.97e-11 62.8
MS.gene044563.t1 MTR_5g097820 31.276 243 125 13 9 219 23 255 7.49e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene044563.t1 AT3G06240 31.200 375 179 19 9 328 36 386 5.00e-32 125
MS.gene044563.t1 AT3G23880 29.968 317 191 13 8 311 13 311 3.04e-24 103
MS.gene044563.t1 AT4G12560 30.094 319 169 14 9 295 4 300 1.43e-23 102
MS.gene044563.t1 AT4G12560 30.094 319 169 14 9 295 4 300 1.43e-23 102
MS.gene044563.t1 AT4G12560 30.094 319 169 14 9 295 4 300 1.43e-23 102
MS.gene044563.t1 AT4G22390 24.590 366 234 13 8 347 3 352 1.68e-18 87.0
MS.gene044563.t1 AT4G22390 24.793 363 237 13 8 347 3 352 1.73e-18 87.0
MS.gene044563.t1 AT4G19940 27.119 295 188 10 8 285 34 318 4.90e-17 82.8
MS.gene044563.t1 AT3G16210 28.383 303 174 13 9 302 5 273 2.19e-16 80.5
MS.gene044563.t1 AT5G62510 26.537 309 194 11 8 300 43 334 2.60e-16 80.5
MS.gene044563.t1 AT1G30790 26.282 312 203 11 1 294 1 303 1.68e-15 78.2
MS.gene044563.t1 AT5G62660 27.586 261 135 10 8 240 40 274 3.71e-14 73.9
MS.gene044563.t1 AT2G40925 26.070 257 159 9 8 250 26 265 4.40e-14 73.6
MS.gene044563.t1 AT1G33530 24.398 332 193 14 2 309 90 387 4.35e-13 70.9
MS.gene044563.t1 AT2G40910 28.629 248 149 10 8 241 68 301 4.87e-13 70.9
MS.gene044563.t1 AT2G40910 28.629 248 149 10 8 241 61 294 6.26e-13 70.5
MS.gene044563.t1 AT3G52320 28.155 309 191 12 8 303 26 316 7.97e-13 69.7
MS.gene044563.t1 AT3G21120 29.949 197 115 11 7 189 1 188 2.75e-12 68.2
MS.gene044563.t1 AT1G47340 24.348 345 212 13 7 325 35 356 5.39e-12 67.4
MS.gene044563.t1 AT1G47340 24.348 345 212 13 7 325 4 325 5.59e-12 67.4
MS.gene044563.t1 AT1G47340 24.348 345 212 13 7 325 4 325 5.59e-12 67.4
MS.gene044563.t1 AT1G11270 27.273 242 131 11 9 227 35 254 6.16e-12 66.6
MS.gene044563.t1 AT1G11270 27.273 242 131 11 9 227 35 254 6.16e-12 66.6
MS.gene044563.t1 AT2G16220 26.409 337 202 14 9 320 6 321 6.98e-12 67.0
MS.gene044563.t1 AT5G50220 26.087 299 159 16 7 294 31 278 1.19e-11 65.9
MS.gene044563.t1 AT2G40920 25.735 272 163 12 2 250 43 298 4.26e-11 64.7
MS.gene044563.t1 AT1G47790 25.098 255 169 9 1 249 17 255 4.30e-11 64.7
MS.gene044563.t1 AT3G16590 27.987 318 187 15 9 304 5 302 4.61e-11 64.3

Find 81 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGAATTTCTTAGTTTA+TGG 0.111007 8.1:+14294263 MS.gene044563:CDS
TATCTAAATCTTGAAATTAA+AGG 0.155978 8.1:+14293767 MS.gene044563:CDS
GCAGAATATTTCTATGGTTT+TGG 0.171498 8.1:+14293902 MS.gene044563:CDS
AAAATGTGAATTAGCAAAAT+TGG 0.175629 8.1:-14293606 None:intergenic
GTCATGATTCACGTTTATTA+AGG 0.188886 8.1:+14294140 MS.gene044563:CDS
CAAATACCTTTCTCTCCTTT+TGG 0.234460 8.1:+14293866 MS.gene044563:CDS
TATTGTGGTTTGTGGGTATT+TGG 0.253702 8.1:+14294244 MS.gene044563:CDS
ATATTGATACAATTGAAATA+TGG 0.279816 8.1:+14294299 MS.gene044563:CDS
TGGAGAATTTCTTAGTTTAT+GGG 0.300088 8.1:+14294264 MS.gene044563:CDS
GTTGATATGAATAAAATTCT+AGG 0.301553 8.1:-14293644 None:intergenic
TATTGTTGTCTTTGATTTAA+CGG 0.303490 8.1:+14294168 MS.gene044563:CDS
TCAAGATTTAGATAAGATTC+AGG 0.316081 8.1:-14293758 None:intergenic
TGATGATTCAAATCCTTCTA+AGG 0.317919 8.1:+14293516 MS.gene044563:CDS
TACTAATATTTCATCGCAAT+TGG 0.320204 8.1:+14293979 MS.gene044563:CDS
GAAATATTCTGCATATAAAC+TGG 0.351251 8.1:-14293891 None:intergenic
ACTTCGCCGGTAACCTTAGA+AGG 0.357031 8.1:-14293529 None:intergenic
TGTTTGTGAAATCCAGTAGA+TGG 0.361261 8.1:-14293845 None:intergenic
TATTGATACAATTGAAATAT+GGG 0.363603 8.1:+14294300 MS.gene044563:CDS
ATTGAAACGGATGGTGATAC+TGG 0.365020 8.1:+14294436 MS.gene044563:CDS
TTATATGCAGAATATTTCTA+TGG 0.367225 8.1:+14293896 MS.gene044563:CDS
TCATGATTCACGTTTATTAA+GGG 0.367232 8.1:+14294141 MS.gene044563:CDS
CCTCAATGGGATTGCTATAA+CGG 0.368433 8.1:-14294060 None:intergenic
TCAAATCCTTCTAAGGTTAC+CGG 0.386726 8.1:+14293523 MS.gene044563:CDS
GGATTCCAGAGGTATTTGTT+TGG 0.408420 8.1:-14293824 None:intergenic
TCAAATGCGTTTCTAAGTCT+TGG 0.413160 8.1:+14293564 MS.gene044563:CDS
TGCGATGAAATATTAGTAAC+CGG 0.431931 8.1:-14293974 None:intergenic
AATACAAAATGCCTTCATCT+TGG 0.434813 8.1:+14294332 MS.gene044563:CDS
TATTTAATGAGGCTATTCAT+TGG 0.437891 8.1:+14294107 MS.gene044563:CDS
GGTTTCAATGCTCATTGATC+CGG 0.441203 8.1:+14293955 MS.gene044563:CDS
CTTAGGCTGCTCATCCTCAA+TGG 0.445603 8.1:-14294074 None:intergenic
TTAAATAGCAACCCCGGCTT+AGG 0.449345 8.1:-14294091 None:intergenic
AACTTGACTATTGTGGTTTG+TGG 0.450962 8.1:+14294236 MS.gene044563:CDS
GGGATCCATGTGAATCATTA+CGG 0.464755 8.1:-14294507 None:intergenic
AACCACAATAGTCAAGTTGA+TGG 0.467522 8.1:-14294231 None:intergenic
ATTTCTTAGTTTATGGGCTA+AGG 0.469399 8.1:+14294270 MS.gene044563:CDS
TGTCTTTGATTTAACGGAAA+GGG 0.470268 8.1:+14294174 MS.gene044563:CDS
TAATGAGGCTATTCATTGGT+TGG 0.476284 8.1:+14294111 MS.gene044563:CDS
AGTTGATGGTCAAACTCATC+TGG 0.476777 8.1:-14294217 None:intergenic
GAGACGCACGTGAAGCGTTA+CGG 0.476823 8.1:-14294691 None:intergenic
TACCTCTGGAATCCATCTAC+TGG 0.477589 8.1:+14293833 MS.gene044563:CDS
AAAGTCGCTGATTTCACTCC+CGG 0.482158 8.1:+14294730 MS.gene044563:CDS
TTAGGCTGCTCATCCTCAAT+GGG 0.484131 8.1:-14294073 None:intergenic
GTTATCCAAACAAATACCTC+TGG 0.486229 8.1:+14293819 MS.gene044563:CDS
GAGGATGAGCAGCCTAAGCC+GGG 0.489365 8.1:+14294079 MS.gene044563:CDS
TGAGGATGAGCAGCCTAAGC+CGG 0.491054 8.1:+14294078 MS.gene044563:CDS
AAGTGGTGATATTATTGAAA+CGG 0.495211 8.1:+14294423 MS.gene044563:CDS
CATGCATGCTTCTTCCTCCA+TGG 0.499331 8.1:-14293477 None:intergenic
ACTTGACTATTGTGGTTTGT+GGG 0.504506 8.1:+14294237 MS.gene044563:CDS
TAAGCTTGTTCACGGTCACC+CGG 0.504979 8.1:-14294749 None:intergenic
CTGGAACCAAAAGGAGAGAA+AGG 0.506844 8.1:-14293872 None:intergenic
AGATGGCGGTAGACTGGTAG+TGG 0.523294 8.1:+14294620 MS.gene044563:intron
CCGTTATAGCAATCCCATTG+AGG 0.526015 8.1:+14294060 MS.gene044563:CDS
CGCTTCACGTGCGTCTCAAG+TGG 0.527213 8.1:+14294697 MS.gene044563:CDS
AACAGATAATCATCCGTTGA+CGG 0.531319 8.1:-14293932 None:intergenic
GCCGGGGTTGCTATTTAATG+AGG 0.531997 8.1:+14294096 MS.gene044563:CDS
GCATATAAACTGGAACCAAA+AGG 0.540603 8.1:-14293881 None:intergenic
GACCATCAACTTGACTATTG+TGG 0.546126 8.1:+14294229 MS.gene044563:CDS
CATGGAGGAAGAAGCATGCA+TGG 0.555067 8.1:+14293478 None:intergenic
TTGTCTTTGATTTAACGGAA+AGG 0.568763 8.1:+14294173 MS.gene044563:CDS
TGAGTCTTAGTCCAAGATGA+AGG 0.569111 8.1:-14294343 None:intergenic
GTCAACGGATGATTATCTGT+TGG 0.589875 8.1:+14293934 MS.gene044563:CDS
GAAATTAAAGGCTCATGCAG+AGG 0.590051 8.1:+14293779 MS.gene044563:CDS
GTGGAAAGAAATTGAGATCG+AGG 0.598854 8.1:+14294027 MS.gene044563:CDS
GCGGTAGACTGGTAGTGGAT+TGG 0.599251 8.1:+14294625 MS.gene044563:intron
TGGAAAGAAATTGAGATCGA+GGG 0.601685 8.1:+14294028 MS.gene044563:CDS
GCCTCATTAAATAGCAACCC+CGG 0.605181 8.1:-14294097 None:intergenic
AAGCTTGTTCACGGTCACCC+GGG 0.614809 8.1:-14294748 None:intergenic
AACGGATGGTGATACTGGAT+TGG 0.615798 8.1:+14294441 MS.gene044563:CDS
TCCATGTGAATCATTACGGA+AGG 0.622341 8.1:-14294503 None:intergenic
AATGGAGAAAAGTAATCTGT+CGG 0.624209 8.1:-14294388 None:intergenic
AAGTCGCTGATTTCACTCCC+GGG 0.625982 8.1:+14294731 MS.gene044563:CDS
GGTGATATTATTGAAACGGA+TGG 0.636455 8.1:+14294427 MS.gene044563:CDS
TTGGTGAAGTTCAATGACAA+AGG 0.647651 8.1:+14294644 MS.gene044563:CDS
TCCTTCCGTAATGATTCACA+TGG 0.652483 8.1:+14294502 MS.gene044563:CDS
AAACGTATAAGAGACTTCGC+CGG 0.655034 8.1:-14293542 None:intergenic
ATTTGAATCATCAACTCGTG+AGG 0.662662 8.1:-14293506 None:intergenic
TCTCGTTGAGAGATAATACG+TGG 0.669859 8.1:+14294008 MS.gene044563:CDS
CGCACGTGAAGCGTTACGGT+AGG 0.692600 8.1:-14294687 None:intergenic
ATCCAGTAGATGGATTCCAG+AGG 0.715335 8.1:-14293835 None:intergenic
AGGATGAGCAGCCTAAGCCG+GGG 0.728363 8.1:+14294080 MS.gene044563:CDS
TTGGTGAAGTCTGATGACAA+AGG 0.797487 8.1:+14294460 MS.gene044563:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGATACAATTGAAATA+TGG + chr8.1:14294299-14294318 MS.gene044563:CDS 15.0%
!! TATCTAAATCTTGAAATTAA+AGG + chr8.1:14293767-14293786 MS.gene044563:CDS 15.0%
!! TATTGATACAATTGAAATAT+GGG + chr8.1:14294300-14294319 MS.gene044563:CDS 15.0%
!! AAAATGTGAATTAGCAAAAT+TGG - chr8.1:14293609-14293628 None:intergenic 20.0%
!! GTTGATATGAATAAAATTCT+AGG - chr8.1:14293647-14293666 None:intergenic 20.0%
!!! TATTGTTGTCTTTGATTTAA+CGG + chr8.1:14294168-14294187 MS.gene044563:CDS 20.0%
!!! TTATATGCAGAATATTTCTA+TGG + chr8.1:14293896-14293915 MS.gene044563:CDS 20.0%
! AAGTGGTGATATTATTGAAA+CGG + chr8.1:14294423-14294442 MS.gene044563:CDS 25.0%
! GAAATATTCTGCATATAAAC+TGG - chr8.1:14293894-14293913 None:intergenic 25.0%
! TACTAATATTTCATCGCAAT+TGG + chr8.1:14293979-14293998 MS.gene044563:CDS 25.0%
! TATTTAATGAGGCTATTCAT+TGG + chr8.1:14294107-14294126 MS.gene044563:CDS 25.0%
! TCAAGATTTAGATAAGATTC+AGG - chr8.1:14293761-14293780 None:intergenic 25.0%
! TCATGATTCACGTTTATTAA+GGG + chr8.1:14294141-14294160 MS.gene044563:CDS 25.0%
! TGGAGAATTTCTTAGTTTAT+GGG + chr8.1:14294264-14294283 MS.gene044563:CDS 25.0%
! TTGGAGAATTTCTTAGTTTA+TGG + chr8.1:14294263-14294282 MS.gene044563:CDS 25.0%
!!! CAGAATATTTCTATGGTTTT+GGG + chr8.1:14293903-14293922 MS.gene044563:CDS 25.0%
AATACAAAATGCCTTCATCT+TGG + chr8.1:14294332-14294351 MS.gene044563:CDS 30.0%
AATGGAGAAAAGTAATCTGT+CGG - chr8.1:14294391-14294410 None:intergenic 30.0%
GTCATGATTCACGTTTATTA+AGG + chr8.1:14294140-14294159 MS.gene044563:CDS 30.0%
TGATGATTCAAATCCTTCTA+AGG + chr8.1:14293516-14293535 MS.gene044563:CDS 30.0%
TGCGATGAAATATTAGTAAC+CGG - chr8.1:14293977-14293996 None:intergenic 30.0%
! ATTTCTTAGTTTATGGGCTA+AGG + chr8.1:14294270-14294289 MS.gene044563:CDS 30.0%
! TGTCTTTGATTTAACGGAAA+GGG + chr8.1:14294174-14294193 MS.gene044563:CDS 30.0%
! TTGTCTTTGATTTAACGGAA+AGG + chr8.1:14294173-14294192 MS.gene044563:CDS 30.0%
!! GCAGAATATTTCTATGGTTT+TGG + chr8.1:14293902-14293921 MS.gene044563:CDS 30.0%
AACAGATAATCATCCGTTGA+CGG - chr8.1:14293935-14293954 None:intergenic 35.0%
AACTTGACTATTGTGGTTTG+TGG + chr8.1:14294236-14294255 MS.gene044563:CDS 35.0%
ACTCAGTATATATAGCCACA+TGG - chr8.1:14294531-14294550 None:intergenic 35.0%
AGGACTTCTGGTGATATTAT+TGG + chr8.1:14294594-14294613 MS.gene044563:intron 35.0%
ATTTGAATCATCAACTCGTG+AGG - chr8.1:14293509-14293528 None:intergenic 35.0%
CCATTGTGTTGTACAAAAAG+TGG + chr8.1:14294406-14294425 MS.gene044563:CDS 35.0%
CTCAGTATATATAGCCACAT+GGG - chr8.1:14294530-14294549 None:intergenic 35.0%
GATATTATTGGAACAGATGG+CGG + chr8.1:14294606-14294625 MS.gene044563:intron 35.0%
GCATATAAACTGGAACCAAA+AGG - chr8.1:14293884-14293903 None:intergenic 35.0%
GGTGATATTATTGAAACGGA+TGG + chr8.1:14294427-14294446 MS.gene044563:CDS 35.0%
GGTGATATTATTGGAACAGA+TGG + chr8.1:14294603-14294622 MS.gene044563:intron 35.0%
GTTATCCAAACAAATACCTC+TGG + chr8.1:14293819-14293838 MS.gene044563:CDS 35.0%
TAATGAGGCTATTCATTGGT+TGG + chr8.1:14294111-14294130 MS.gene044563:CDS 35.0%
TCAAATGCGTTTCTAAGTCT+TGG + chr8.1:14293564-14293583 MS.gene044563:CDS 35.0%
TGGAAAGAAATTGAGATCGA+GGG + chr8.1:14294028-14294047 MS.gene044563:CDS 35.0%
TGTTTGTGAAATCCAGTAGA+TGG - chr8.1:14293848-14293867 None:intergenic 35.0%
TTGGTGAAGTTCAATGACAA+AGG + chr8.1:14294644-14294663 MS.gene044563:CDS 35.0%
! ACTTGACTATTGTGGTTTGT+GGG + chr8.1:14294237-14294256 MS.gene044563:CDS 35.0%
! CAAATACCTTTCTCTCCTTT+TGG + chr8.1:14293866-14293885 MS.gene044563:CDS 35.0%
! GGAAAGGGAACTTTTTGATA+TGG + chr8.1:14294189-14294208 MS.gene044563:CDS 35.0%
! TATTGTGGTTTGTGGGTATT+TGG + chr8.1:14294244-14294263 MS.gene044563:CDS 35.0%
!! AACCACAATAGTCAAGTTGA+TGG - chr8.1:14294234-14294253 None:intergenic 35.0%
!! TCAAATCCTTCTAAGGTTAC+CGG + chr8.1:14293523-14293542 MS.gene044563:CDS 35.0%
!!! CCACTTTTTGTACAACACAA+TGG - chr8.1:14294409-14294428 None:intergenic 35.0%
AAACGTATAAGAGACTTCGC+CGG - chr8.1:14293545-14293564 None:intergenic 40.0%
ATTGAAACGGATGGTGATAC+TGG + chr8.1:14294436-14294455 MS.gene044563:CDS 40.0%
CCTCAATGGGATTGCTATAA+CGG - chr8.1:14294063-14294082 None:intergenic 40.0%
CTTCTTTCACTTCCTTGTGA+TGG + chr8.1:14294553-14294572 MS.gene044563:intron 40.0%
GAAATTAAAGGCTCATGCAG+AGG + chr8.1:14293779-14293798 MS.gene044563:CDS 40.0%
GACCATCAACTTGACTATTG+TGG + chr8.1:14294229-14294248 MS.gene044563:CDS 40.0%
GGGATCCATGTGAATCATTA+CGG - chr8.1:14294510-14294529 None:intergenic 40.0%
GGTTTCAATGCTCATTGATC+CGG + chr8.1:14293955-14293974 MS.gene044563:CDS 40.0%
GTCAACGGATGATTATCTGT+TGG + chr8.1:14293934-14293953 MS.gene044563:CDS 40.0%
GTGGAAAGAAATTGAGATCG+AGG + chr8.1:14294027-14294046 MS.gene044563:CDS 40.0%
TCCATGTGAATCATTACGGA+AGG - chr8.1:14294506-14294525 None:intergenic 40.0%
TCCTTCCGTAATGATTCACA+TGG + chr8.1:14294502-14294521 MS.gene044563:CDS 40.0%
TCTCGTTGAGAGATAATACG+TGG + chr8.1:14294008-14294027 MS.gene044563:CDS 40.0%
TGAGTCTTAGTCCAAGATGA+AGG - chr8.1:14294346-14294365 None:intergenic 40.0%
TTGGTGAAGTCTGATGACAA+AGG + chr8.1:14294460-14294479 MS.gene044563:CDS 40.0%
! TAAGCTTGTTCACCATCACA+AGG - chr8.1:14294568-14294587 None:intergenic 40.0%
! TTGTGATGGTGAACAAGCTT+AGG + chr8.1:14294567-14294586 MS.gene044563:intron 40.0%
!! AGTTGATGGTCAAACTCATC+TGG - chr8.1:14294220-14294239 None:intergenic 40.0%
!! GGATTCCAGAGGTATTTGTT+TGG - chr8.1:14293827-14293846 None:intergenic 40.0%
!!! TTTTGGGTTTGATCCGTCAA+CGG + chr8.1:14293919-14293938 MS.gene044563:CDS 40.0%
AACGGATGGTGATACTGGAT+TGG + chr8.1:14294441-14294460 MS.gene044563:CDS 45.0%
AGCTTAGGACAAAGGACTTC+TGG + chr8.1:14294582-14294601 MS.gene044563:intron 45.0%
CCGTTATAGCAATCCCATTG+AGG + chr8.1:14294060-14294079 MS.gene044563:CDS 45.0%
CTGGAACCAAAAGGAGAGAA+AGG - chr8.1:14293875-14293894 None:intergenic 45.0%
GCCTCATTAAATAGCAACCC+CGG - chr8.1:14294100-14294119 None:intergenic 45.0%
GGTGAACAAGCTTAGGACAA+AGG + chr8.1:14294574-14294593 MS.gene044563:intron 45.0%
TGATTCACATGGATCCCATG+TGG + chr8.1:14294513-14294532 MS.gene044563:intron 45.0%
TTAAATAGCAACCCCGGCTT+AGG - chr8.1:14294094-14294113 None:intergenic 45.0%
TTAGGCTGCTCATCCTCAAT+GGG - chr8.1:14294076-14294095 None:intergenic 45.0%
! ATCCAGTAGATGGATTCCAG+AGG - chr8.1:14293838-14293857 None:intergenic 45.0%
!! AAAGTCGCTGATTTCACTCC+CGG + chr8.1:14294730-14294749 MS.gene044563:CDS 45.0%
!! TACCTCTGGAATCCATCTAC+TGG + chr8.1:14293833-14293852 MS.gene044563:CDS 45.0%
ACTTCGCCGGTAACCTTAGA+AGG - chr8.1:14293532-14293551 None:intergenic 50.0%
CTTAGGCTGCTCATCCTCAA+TGG - chr8.1:14294077-14294096 None:intergenic 50.0%
! TAAGCTTGTTCACGGTCACC+CGG - chr8.1:14294752-14294771 None:intergenic 50.0%
!! AAGTCGCTGATTTCACTCCC+GGG + chr8.1:14294731-14294750 MS.gene044563:CDS 50.0%
!! GCCGGGGTTGCTATTTAATG+AGG + chr8.1:14294096-14294115 MS.gene044563:CDS 50.0%
TGAGGATGAGCAGCCTAAGC+CGG + chr8.1:14294078-14294097 MS.gene044563:CDS 55.0%
! AAGCTTGTTCACGGTCACCC+GGG - chr8.1:14294751-14294770 None:intergenic 55.0%
! AGATGGCGGTAGACTGGTAG+TGG + chr8.1:14294620-14294639 MS.gene044563:intron 55.0%
! GAGACGCACGTGAAGCGTTA+CGG - chr8.1:14294694-14294713 None:intergenic 55.0%
! TGGAACAGATGGCGGTAGAC+TGG + chr8.1:14294614-14294633 MS.gene044563:intron 55.0%
!! GCGGTAGACTGGTAGTGGAT+TGG + chr8.1:14294625-14294644 MS.gene044563:intron 55.0%
AGGATGAGCAGCCTAAGCCG+GGG + chr8.1:14294080-14294099 MS.gene044563:CDS 60.0%
CGCTTCACGTGCGTCTCAAG+TGG + chr8.1:14294697-14294716 MS.gene044563:CDS 60.0%
GAGGATGAGCAGCCTAAGCC+GGG + chr8.1:14294079-14294098 MS.gene044563:CDS 60.0%
! CGCACGTGAAGCGTTACGGT+AGG - chr8.1:14294690-14294709 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 14293479 14294772 14293479 ID=MS.gene044563
chr8.1 mRNA 14293479 14294772 14293479 ID=MS.gene044563.t1;Parent=MS.gene044563
chr8.1 exon 14293479 14294531 14293479 ID=MS.gene044563.t1.exon1;Parent=MS.gene044563.t1
chr8.1 CDS 14293479 14294531 14293479 ID=cds.MS.gene044563.t1;Parent=MS.gene044563.t1
chr8.1 exon 14294632 14294772 14294632 ID=MS.gene044563.t1.exon2;Parent=MS.gene044563.t1
chr8.1 CDS 14294632 14294772 14294632 ID=cds.MS.gene044563.t1;Parent=MS.gene044563.t1
Gene Sequence

>MS.gene044563

ATGGAGGAAGAAGCATGCATGGATCTACCTCACGAGTTGATGATTCAAATCCTTCTAAGGTTACCGGCGAAGTCTCTTATACGTTTCAAATGCGTTTCTAAGTCTTGGTTTTCTCTTATCTCTGATACCAATTTTGCTAATTCACATTTTCAAATTACACACACTCCTAGAATTTTATTCATATCAACATCAACTTGTGAAACTCGATCTATAGATTTTGAATCATCGCTTAACGACGATGATTCTGTTTCTGCTTCACTCAATCTTGATTTTCTGCTTCCTGAATCTTATCTAAATCTTGAAATTAAAGGCTCATGCAGAGGCTTTATATTTTTGCACTGTTATCCAAACAAATACCTCTGGAATCCATCTACTGGATTTCACAAACAAATACCTTTCTCTCCTTTTGGTTCCAGTTTATATGCAGAATATTTCTATGGTTTTGGGTTTGATCCGTCAACGGATGATTATCTGTTGGTTTCAATGCTCATTGATCCGGTTACTAATATTTCATCGCAATTGGAGTTTTTCTCGTTGAGAGATAATACGTGGAAAGAAATTGAGATCGAGGGTAGTCATTTCCGTTATAGCAATCCCATTGAGGATGAGCAGCCTAAGCCGGGGTTGCTATTTAATGAGGCTATTCATTGGTTGGCTTATCGTCATGATTCACGTTTATTAAGGGATGTTATTGTTGTCTTTGATTTAACGGAAAGGGAACTTTTTGATATGGATTTGCCAGATGAGTTTGACCATCAACTTGACTATTGTGGTTTGTGGGTATTTGGAGAATTTCTTAGTTTATGGGCTAAGGATTGTTATATTGATACAATTGAAATATGGGTGATGAAAGAATACAAAATGCCTTCATCTTGGACTAAGACTCATGTTCTGTCTTTTGATAGTATGCCGACAGATTACTTTTCTCCATTGTGTTGTACAAAAAGTGGTGATATTATTGAAACGGATGGTGATACTGGATTGGTGAAGTCTGATGACAAAGGACAACTGCTTGAGCATCTCTCCTTCCGTAATGATTCACATGGATCCCATGTGGCTATATATACTGAGTCTCTTCTTTCACTTCCTTGTGATGGTGAACAAGCTTAGGACAAAGGACTTCTGGTGATATTATTGGAACAGATGGCGGTAGACTGGTAGTGGATTGGTGAAGTTCAATGACAAAGGACAGCTGCTAGAGCATCACTCCTACCGTAACGCTTCACGTGCGTCTCAAGTGGCTATGTATACAAAGTCGCTGATTTCACTCCCGGGTGACCGTGAACAAGCTTAA

Protein sequence

>MS.gene044563.t1

MEEEACMDLPHELMIQILLRLPAKSLIRFKCVSKSWFSLISDTNFANSHFQITHTPRILFISTSTCETRSIDFESSLNDDDSVSASLNLDFLLPESYLNLEIKGSCRGFIFLHCYPNKYLWNPSTGFHKQIPFSPFGSSLYAEYFYGFGFDPSTDDYLLVSMLIDPVTNISSQLEFFSLRDNTWKEIEIEGSHFRYSNPIEDEQPKPGLLFNEAIHWLAYRHDSRLLRDVIVVFDLTERELFDMDLPDEFDHQLDYCGLWVFGEFLSLWAKDCYIDTIEIWVMKEYKMPSSWTKTHVLSFDSMPTDYFSPLCCTKSGDIIETDGDTGLVKSDDKGQLLEHLSFRNDSHGSHTGSGLVKFNDKGQLLEHHSYRNASRASQVAMYTKSLISLPGDREQA