AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40984

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40984.t1 MTR_1g055165 70.423 355 49 3 1 355 20 318 3.15e-174 487
MS.gene40984.t1 MTR_1g055135 65.676 370 95 6 1 355 23 375 4.51e-159 451
MS.gene40984.t1 MTR_5g097210 54.396 364 132 8 1 352 19 360 1.38e-123 360
MS.gene40984.t1 MTR_1g055195 60.443 316 111 8 49 355 168 478 6.47e-120 355
MS.gene40984.t1 MTR_1g055175 83.085 201 34 0 155 355 1 201 1.04e-116 337
MS.gene40984.t1 MTR_4g109270 51.743 373 136 13 1 355 18 364 6.94e-109 323
MS.gene40984.t1 MTR_4g117750 52.033 369 133 8 4 354 16 358 5.25e-108 325
MS.gene40984.t1 MTR_4g117750 49.091 110 53 3 246 353 373 481 1.64e-22 98.6
MS.gene40984.t1 MTR_3g103020 50.269 372 145 10 1 355 30 378 1.89e-105 314
MS.gene40984.t1 MTR_3g034180 48.936 376 150 10 1 354 133 488 9.81e-104 314
MS.gene40984.t1 MTR_4g117850 50.543 368 135 13 1 348 33 373 3.56e-103 308
MS.gene40984.t1 MTR_4g122850 47.312 372 159 10 2 355 12 364 4.85e-103 308
MS.gene40984.t1 MTR_4g109280 52.688 372 129 12 1 355 18 359 8.87e-102 304
MS.gene40984.t1 MTR_6g060650 49.465 374 144 11 4 354 21 372 2.78e-101 303
MS.gene40984.t1 MTR_5g070080 48.819 381 155 11 1 355 20 386 3.50e-99 299
MS.gene40984.t1 MTR_3g034130 48.774 367 139 11 1 341 19 362 3.41e-98 296
MS.gene40984.t1 MTR_4g094365 48.238 369 155 9 1 355 18 364 9.82e-97 291
MS.gene40984.t1 MTR_3g034160 48.148 378 150 10 1 354 19 374 9.42e-95 287
MS.gene40984.t1 MTR_5g070088 47.680 388 141 14 1 350 17 380 1.11e-94 287
MS.gene40984.t1 MTR_4g023090 44.186 387 154 11 1 354 26 383 1.56e-94 287
MS.gene40984.t1 MTR_5g070130 47.467 375 159 12 1 355 21 377 2.03e-94 286
MS.gene40984.t1 MTR_4g116330 46.341 369 159 13 3 355 35 380 3.47e-94 286
MS.gene40984.t1 MTR_4g117770 47.059 374 152 10 1 355 21 367 3.77e-94 285
MS.gene40984.t1 MTR_4g117810 47.059 374 152 10 1 355 21 367 3.77e-94 285
MS.gene40984.t1 MTR_4g023080 46.832 363 154 11 1 353 19 352 9.97e-94 283
MS.gene40984.t1 MTR_4g117720 52.548 314 118 10 59 350 68 372 1.92e-92 281
MS.gene40984.t1 MTR_4g021785 47.268 366 153 11 1 355 19 355 1.40e-91 278
MS.gene40984.t1 MTR_4g117780 46.237 372 158 11 1 355 21 367 2.66e-91 278
MS.gene40984.t1 MTR_4g118380 47.632 359 129 13 4 326 21 356 5.23e-91 277
MS.gene40984.t1 MTR_4g023380 42.674 389 146 12 5 355 30 379 1.76e-88 271
MS.gene40984.t1 MTR_4g023070 42.708 384 161 13 1 353 13 368 6.30e-84 259
MS.gene40984.t1 MTR_4g023200 44.199 362 162 14 5 353 24 358 1.65e-83 258
MS.gene40984.t1 MTR_4g023190 43.597 367 158 13 4 353 23 357 2.55e-83 257
MS.gene40984.t1 MTR_4g118370 55.285 246 80 5 117 352 32 257 3.23e-83 253
MS.gene40984.t1 MTR_8g433040 44.054 370 159 11 1 355 28 364 2.11e-82 255
MS.gene40984.t1 MTR_8g032380 44.054 370 159 11 1 355 28 364 2.11e-82 255
MS.gene40984.t1 MTR_4g023150 44.077 363 163 15 4 353 23 358 2.47e-82 254
MS.gene40984.t1 MTR_4g023120 41.432 391 160 13 1 355 13 370 5.33e-82 254
MS.gene40984.t1 MTR_4g023440 41.935 372 132 12 1 355 28 332 1.19e-77 242
MS.gene40984.t1 MTR_1g055250 62.500 200 64 4 142 332 49 246 4.93e-73 230
MS.gene40984.t1 MTR_8g032390 41.962 367 150 12 1 350 50 370 9.38e-72 228
MS.gene40984.t1 MTR_4g116330 41.463 369 138 14 3 355 35 341 2.45e-71 226
MS.gene40984.t1 MTR_4g023130 40.659 364 136 12 1 354 19 312 1.95e-67 215
MS.gene40984.t1 MTR_8g013010 47.955 269 103 8 1 255 64 309 1.28e-66 213
MS.gene40984.t1 MTR_4g118400 45.033 302 138 11 52 349 17 294 6.53e-64 205
MS.gene40984.t1 MTR_4g117870 42.857 280 110 6 87 355 27 267 1.61e-62 201
MS.gene40984.t1 MTR_8g433030 39.889 361 133 12 1 350 50 337 1.30e-60 198
MS.gene40984.t1 MTR_7g079400 43.796 274 131 8 101 355 68 337 4.50e-60 197
MS.gene40984.t1 MTR_4g121580 42.442 344 129 14 1 321 21 318 4.03e-58 193
MS.gene40984.t1 MTR_7g079370 40.556 360 161 16 20 350 16 351 4.01e-56 187
MS.gene40984.t1 MTR_2g048580 35.376 359 194 11 1 355 18 342 2.55e-55 184
MS.gene40984.t1 MTR_8g102520 37.861 346 152 11 26 355 24 322 5.68e-55 183
MS.gene40984.t1 MTR_8g040935 50.246 203 89 8 160 355 11 208 6.03e-48 161
MS.gene40984.t1 MTR_4g116320 46.364 220 97 6 147 352 43 255 3.98e-47 160
MS.gene40984.t1 MTR_6g463430 43.662 213 106 7 145 355 2 202 1.13e-42 147
MS.gene40984.t1 MTR_4g117530 39.759 249 92 8 123 355 47 253 2.99e-41 145
MS.gene40984.t1 MTR_7g079420 38.351 279 127 11 94 355 894 1144 1.79e-36 140
MS.gene40984.t1 MTR_4g116340 39.749 239 89 8 1 221 46 247 3.54e-35 129
MS.gene40984.t1 MTR_4g114700 36.293 259 98 8 106 346 9 218 5.01e-35 128
MS.gene40984.t1 MTR_4g117430 48.252 143 64 3 118 255 15 152 3.23e-33 121
MS.gene40984.t1 MTR_4g118360 49.618 131 55 5 231 355 1 126 4.68e-31 114
MS.gene40984.t1 MTR_7g117720 38.384 198 66 8 1 179 20 180 1.30e-26 107
MS.gene40984.t1 MTR_7g117720 42.574 101 54 3 254 350 172 272 1.99e-14 73.2
MS.gene40984.t1 MTR_2g021155 29.670 364 204 16 2 339 47 384 2.56e-26 110
MS.gene40984.t1 MTR_1g094210 26.667 375 204 13 1 347 67 398 3.93e-26 108
MS.gene40984.t1 MTR_4g122860 31.839 223 116 6 139 355 128 320 6.09e-26 106
MS.gene40984.t1 MTR_1g094210 26.171 363 199 12 1 335 67 388 2.11e-25 106
MS.gene40984.t1 MTR_3g036290 29.532 342 194 15 2 335 33 335 3.22e-25 105
MS.gene40984.t1 MTR_2g028140 28.226 372 184 14 2 322 16 355 3.77e-25 105
MS.gene40984.t1 MTR_1g055145 66.265 83 27 1 189 271 121 202 7.27e-25 102
MS.gene40984.t1 MTR_1g055145 52.885 104 33 2 1 104 43 130 6.34e-22 94.4
MS.gene40984.t1 MTR_2g021050 28.409 352 180 14 2 321 16 327 7.64e-25 104
MS.gene40984.t1 MTR_5g023000 52.000 100 38 3 261 355 5 99 7.88e-25 97.1
MS.gene40984.t1 MTR_1g068875 27.832 309 164 11 3 285 16 291 9.07e-25 103
MS.gene40984.t1 MTR_5g057790 29.677 310 155 14 2 284 57 330 9.79e-25 104
MS.gene40984.t1 MTR_1g068835 29.126 309 161 13 3 285 16 292 9.93e-25 103
MS.gene40984.t1 MTR_4g055060 29.773 309 165 12 2 285 41 322 1.02e-24 103
MS.gene40984.t1 MTR_5g057020 32.302 291 147 14 2 279 57 310 1.47e-24 102
MS.gene40984.t1 MTR_0667s0010 29.193 322 157 14 2 284 17 306 1.63e-24 103
MS.gene40984.t1 MTR_5g069120 39.286 196 77 8 1 172 1 178 1.64e-24 99.0
MS.gene40984.t1 MTR_2g028130 31.975 319 164 15 2 285 16 316 1.84e-24 103
MS.gene40984.t1 MTR_2g028110 28.090 356 184 15 2 321 15 334 2.67e-24 102
MS.gene40984.t1 MTR_2g021190 30.100 299 163 12 2 280 32 304 5.40e-24 101
MS.gene40984.t1 MTR_8g098830 40.491 163 92 4 163 323 35 194 8.11e-24 98.6
MS.gene40984.t1 MTR_5g057690 31.561 301 151 14 2 284 57 320 1.02e-23 101
MS.gene40984.t1 MTR_2g028160 29.503 322 170 12 2 285 16 318 1.32e-23 101
MS.gene40984.t1 MTR_4g070550 28.075 374 191 14 2 325 16 361 2.85e-23 100
MS.gene40984.t1 MTR_4g109290 39.881 168 51 7 1 164 19 140 3.86e-23 95.5
MS.gene40984.t1 MTR_2g426020 26.263 396 218 13 2 352 17 383 1.14e-22 98.6
MS.gene40984.t1 MTR_0760s0010 29.693 293 162 12 2 281 58 319 1.71e-22 97.8
MS.gene40984.t1 MTR_5g057710 31.190 311 149 17 2 284 57 330 2.54e-22 97.4
MS.gene40984.t1 MTR_7g079450 39.568 139 80 3 217 355 3 137 2.61e-22 91.7
MS.gene40984.t1 MTR_2g425980 28.678 401 201 18 3 352 17 383 3.42e-22 97.1
MS.gene40984.t1 MTR_2g426090 26.171 363 193 14 2 323 17 345 3.49e-22 97.1
MS.gene40984.t1 MTR_2g426060 26.829 328 165 12 3 286 18 314 4.24e-22 97.1
MS.gene40984.t1 MTR_1g055200 69.841 63 18 1 102 163 5 67 4.53e-22 90.1
MS.gene40984.t1 MTR_2g026010 25.828 302 172 8 10 285 23 298 4.90e-22 96.7
MS.gene40984.t1 MTR_3g006670 29.492 295 168 14 3 280 61 332 1.26e-21 95.5
MS.gene40984.t1 MTR_4g133170 27.184 309 157 12 2 280 15 285 1.41e-21 95.1
MS.gene40984.t1 MTR_3g030250 27.682 289 177 11 2 284 48 310 3.04e-21 94.0
MS.gene40984.t1 MTR_2g031720 27.157 313 168 11 2 284 17 299 5.53e-21 93.6
MS.gene40984.t1 MTR_2g046830 27.333 300 174 12 2 284 36 308 8.29e-21 93.2
MS.gene40984.t1 MTR_5g011200 29.494 356 198 18 2 336 28 351 1.03e-20 92.4
MS.gene40984.t1 MTR_8g099460 25.513 341 184 13 3 305 17 325 1.34e-20 92.4
MS.gene40984.t1 MTR_5g022420 26.552 290 177 12 1 282 37 298 1.47e-20 92.0
MS.gene40984.t1 MTR_2g025420 25.836 329 177 12 2 285 17 323 2.03e-20 92.0
MS.gene40984.t1 MTR_3g007330 30.201 298 166 12 2 285 59 328 2.83e-20 91.3
MS.gene40984.t1 MTR_1g068860 28.065 310 165 12 3 285 16 294 3.24e-20 91.3
MS.gene40984.t1 MTR_2g021150 24.800 375 232 15 1 351 24 372 5.67e-20 90.5
MS.gene40984.t1 MTR_7g056290 29.299 314 188 11 2 288 33 339 6.71e-20 90.5
MS.gene40984.t1 MTR_2g024110 25.817 306 169 11 2 280 15 289 6.99e-20 90.1
MS.gene40984.t1 MTR_3g010590 27.208 283 176 10 2 280 50 306 1.21e-19 89.7
MS.gene40984.t1 MTR_6g021880 29.677 310 159 14 2 280 31 312 1.51e-19 89.4
MS.gene40984.t1 MTR_3g007410 27.187 320 178 12 2 297 63 351 1.59e-19 89.4
MS.gene40984.t1 MTR_6g027910 29.167 384 205 20 2 347 20 374 1.88e-19 89.0
MS.gene40984.t1 MTR_6g065980 27.682 289 166 13 2 280 27 282 2.41e-19 88.6
MS.gene40984.t1 MTR_2g024100 27.673 318 154 13 6 280 22 306 2.77e-19 88.6
MS.gene40984.t1 MTR_3g009310 28.947 304 167 12 2 285 53 327 3.25e-19 88.2
MS.gene40984.t1 MTR_2g031680 27.331 311 163 13 2 284 17 292 3.37e-19 88.2
MS.gene40984.t1 MTR_3g007360 26.154 325 175 13 2 297 63 351 4.79e-19 87.8
MS.gene40984.t1 MTR_3g007430 27.419 310 163 12 2 284 54 328 6.14e-19 87.4
MS.gene40984.t1 MTR_3g009240 29.530 298 159 14 2 280 47 312 6.49e-19 87.4
MS.gene40984.t1 MTR_1g056710 29.739 306 160 14 2 284 45 318 6.81e-19 87.4
MS.gene40984.t1 MTR_3g006500 27.336 289 188 9 2 284 28 300 8.01e-19 87.0
MS.gene40984.t1 MTR_6g090180 26.630 368 194 14 2 319 58 399 1.86e-18 86.7
MS.gene40984.t1 MTR_7g056390 29.022 317 185 12 2 288 29 335 1.93e-18 86.3
MS.gene40984.t1 MTR_3g083010 26.471 408 211 17 2 349 17 395 1.96e-18 86.3
MS.gene40984.t1 MTR_7g056003 25.700 393 234 14 2 347 26 407 2.93e-18 85.9
MS.gene40984.t1 MTR_3g072470 27.900 319 185 10 2 288 30 335 3.61e-18 85.5
MS.gene40984.t1 MTR_3g023930 27.972 286 163 11 2 280 45 294 4.39e-18 84.7
MS.gene40984.t1 MTR_4g006270 26.441 295 158 9 2 278 15 268 4.79e-18 85.1
MS.gene40984.t1 MTR_3g024150 27.148 291 176 12 2 280 46 312 6.31e-18 84.7
MS.gene40984.t1 MTR_3g007270 26.861 309 179 13 2 285 58 344 6.77e-18 84.7
MS.gene40984.t1 MTR_3g011100 28.990 307 167 18 3 285 247 526 7.56e-18 85.1
MS.gene40984.t1 MTR_2g047832 26.266 316 177 12 2 284 40 332 9.76e-18 84.3
MS.gene40984.t1 MTR_7g007300 29.210 291 172 13 2 284 114 378 1.14e-17 84.3
MS.gene40984.t1 MTR_7g070830 25.845 414 216 15 2 348 32 421 1.39e-17 84.0
MS.gene40984.t1 MTR_2g025960 26.577 222 120 7 99 284 1 215 1.39e-17 82.8
MS.gene40984.t1 MTR_1g050542 24.865 370 222 14 1 347 68 404 1.47e-17 83.6
MS.gene40984.t1 MTR_1g097560 26.901 342 184 18 1 317 46 346 1.54e-17 83.2
MS.gene40984.t1 MTR_1g097330 28.525 305 164 15 1 284 26 297 1.94e-17 83.2
MS.gene40984.t1 MTR_1g114700 28.814 295 175 12 3 282 41 315 1.96e-17 83.2
MS.gene40984.t1 MTR_8g101580 23.913 368 230 14 1 347 56 394 1.97e-17 83.2
MS.gene40984.t1 MTR_2g046920 26.159 302 175 12 2 284 35 307 2.11e-17 82.8
MS.gene40984.t1 MTR_1g097490 26.776 366 215 17 1 347 59 390 2.56e-17 82.8
MS.gene40984.t1 MTR_4g061340 27.597 308 171 14 2 285 37 316 2.92e-17 82.4
MS.gene40984.t1 MTR_7g407070 29.747 316 158 15 3 280 44 333 3.13e-17 82.8
MS.gene40984.t1 MTR_2g029990 29.097 299 166 14 2 280 62 334 3.33e-17 82.4
MS.gene40984.t1 MTR_7g070880 25.659 417 213 16 2 348 32 421 4.46e-17 82.4
MS.gene40984.t1 MTR_2g031640 26.101 318 161 13 2 284 17 295 4.59e-17 82.0
MS.gene40984.t1 MTR_3g436150 30.492 305 164 18 3 280 44 327 5.02e-17 82.0
MS.gene40984.t1 MTR_3g013740 29.808 312 166 15 2 284 55 342 7.68e-17 81.6
MS.gene40984.t1 MTR_6g053260 28.000 300 168 12 2 280 348 620 1.09e-16 81.6
MS.gene40984.t1 MTR_2g046900 25.325 308 178 12 2 284 39 319 1.35e-16 80.5
MS.gene40984.t1 MTR_3g010430 27.303 304 164 14 2 280 47 318 1.37e-16 80.9
MS.gene40984.t1 MTR_3g010970 28.169 284 173 12 2 280 59 316 1.53e-16 80.5
MS.gene40984.t1 MTR_3g006530 25.532 376 220 15 2 347 51 396 1.59e-16 80.5
MS.gene40984.t1 MTR_2g021252 26.722 363 219 14 2 350 58 387 2.49e-16 79.7
MS.gene40984.t1 MTR_8g062660 24.607 382 202 14 2 348 33 363 3.57e-16 80.1
MS.gene40984.t1 MTR_2g043400 26.168 321 178 11 2 285 34 332 3.66e-16 79.7
MS.gene40984.t1 MTR_8g467140 26.230 305 175 11 1 284 42 317 5.71e-16 78.2
MS.gene40984.t1 MTR_7g060940 26.367 311 175 9 3 282 34 321 7.40e-16 78.6
MS.gene40984.t1 MTR_8g046310 26.596 376 225 16 2 351 27 377 8.89e-16 78.2
MS.gene40984.t1 MTR_3g010870 26.460 291 173 11 3 280 49 311 1.02e-15 78.2
MS.gene40984.t1 MTR_2g055970 27.331 311 164 16 1 284 221 496 1.13e-15 78.6
MS.gene40984.t1 MTR_2g021210 30.584 291 161 13 2 280 95 356 1.29e-15 77.8
MS.gene40984.t1 MTR_3g007300 26.005 373 183 17 2 347 60 366 1.29e-15 77.4
MS.gene40984.t1 MTR_5g007610 28.165 316 165 14 2 285 52 337 1.39e-15 77.8
MS.gene40984.t1 MTR_3g024110 26.389 288 177 12 2 280 112 373 1.43e-15 77.8
MS.gene40984.t1 MTR_3g010390 29.355 310 176 16 2 285 44 336 1.87e-15 77.4
MS.gene40984.t1 MTR_3g010520 26.667 285 169 11 2 280 36 286 2.16e-15 77.0
MS.gene40984.t1 MTR_1g054575 27.027 296 168 11 1 279 62 326 2.78e-15 77.4
MS.gene40984.t1 MTR_7g077970 29.154 319 180 13 3 285 19 327 3.52e-15 76.6
MS.gene40984.t1 MTR_0044s0300 27.119 295 171 14 2 280 49 315 4.75e-15 76.3
MS.gene40984.t1 MTR_3g010920 26.667 285 170 10 2 280 55 306 6.36e-15 75.5
MS.gene40984.t1 MTR_0464s0020 28.313 332 175 17 2 288 34 347 6.56e-15 75.9
MS.gene40984.t1 MTR_5g097680 25.990 404 213 19 2 331 28 419 6.63e-15 75.9
MS.gene40984.t1 MTR_2g461450 25.597 293 172 9 3 280 30 291 9.87e-15 74.7
MS.gene40984.t1 MTR_8g012090 27.108 332 173 16 2 304 27 318 1.01e-14 74.7
MS.gene40984.t1 MTR_2g046800 26.727 333 180 16 1 291 24 334 1.10e-14 75.1
MS.gene40984.t1 MTR_6g034720 41.322 121 50 3 129 232 53 169 1.20e-14 72.8
MS.gene40984.t1 MTR_3g006570 26.936 297 172 11 2 280 32 301 1.63e-14 74.3
MS.gene40984.t1 MTR_3g030240 26.174 298 157 14 2 280 51 304 1.88e-14 74.3
MS.gene40984.t1 MTR_3g036335 26.263 297 175 13 2 280 52 322 1.96e-14 74.3
MS.gene40984.t1 MTR_4g028510 27.475 404 204 20 2 348 27 398 2.19e-14 74.3
MS.gene40984.t1 MTR_5g097330 23.664 393 234 13 2 348 27 399 2.62e-14 73.9
MS.gene40984.t1 MTR_4g023430 70.213 47 14 0 1 47 51 97 3.17e-14 71.6
MS.gene40984.t1 MTR_0115s0020 23.618 398 238 14 2 352 21 399 3.20e-14 73.6
MS.gene40984.t1 MTR_0129s0070 25.281 356 205 14 2 317 28 362 3.53e-14 73.6
MS.gene40984.t1 MTR_6g004660 27.597 308 170 13 2 280 27 310 3.57e-14 73.6
MS.gene40984.t1 MTR_3g013770 26.733 303 179 11 2 284 44 323 4.74e-14 73.2
MS.gene40984.t1 MTR_1g442850 26.791 321 172 16 3 288 17 309 5.61e-14 72.8
MS.gene40984.t1 MTR_3g083640 26.703 367 218 19 2 347 66 402 5.79e-14 72.8
MS.gene40984.t1 MTR_0064s0160 25.000 392 238 13 2 355 53 426 6.33e-14 72.8
MS.gene40984.t1 MTR_3g030330 26.159 302 194 12 2 297 31 309 7.09e-14 72.4
MS.gene40984.t1 MTR_5g037680 27.070 314 183 12 2 284 19 317 8.72e-14 72.4
MS.gene40984.t1 MTR_1g054725 29.801 302 163 18 2 280 31 306 9.71e-14 72.0
MS.gene40984.t1 MTR_8g073550 28.571 189 106 6 2 176 41 214 9.73e-14 70.5
MS.gene40984.t1 MTR_3g010620 25.496 353 204 14 2 339 47 355 1.26e-13 71.6
MS.gene40984.t1 MTR_4g117550 24.282 383 213 14 2 348 28 369 1.30e-13 71.6
MS.gene40984.t1 MTR_2g021770 26.488 336 178 12 2 284 23 342 1.40e-13 71.6
MS.gene40984.t1 MTR_6g086825 26.471 408 203 19 2 346 81 454 1.75e-13 71.6
MS.gene40984.t1 MTR_1g088120 25.826 333 175 10 3 288 22 329 2.01e-13 71.2
MS.gene40984.t1 MTR_7g079640 26.012 346 215 15 2 325 24 350 2.63e-13 70.9
MS.gene40984.t1 MTR_1g055375 25.497 302 186 12 2 284 15 296 3.41e-13 70.5
MS.gene40984.t1 MTR_8g013005 53.333 60 27 1 296 355 1 59 3.54e-13 63.9
MS.gene40984.t1 MTR_5g046260 25.770 357 180 16 2 347 15 297 4.10e-13 69.3
MS.gene40984.t1 MTR_4g030830 23.604 394 231 14 3 347 21 393 4.89e-13 70.1
MS.gene40984.t1 MTR_1g055070 27.969 261 145 13 2 235 60 304 6.21e-13 69.7
MS.gene40984.t1 MTR_3g009260 26.910 301 158 13 3 280 53 314 7.09e-13 69.3
MS.gene40984.t1 MTR_7g067680 29.966 297 145 18 2 280 60 311 1.13e-12 68.9
MS.gene40984.t1 MTR_7g055977 28.882 322 156 15 3 285 19 306 1.35e-12 68.6
MS.gene40984.t1 MTR_7g056260 25.240 313 184 10 2 285 25 316 1.41e-12 68.2
MS.gene40984.t1 MTR_4g055820 24.786 351 197 13 2 304 25 356 1.68e-12 68.2
MS.gene40984.t1 MTR_0128s0020 28.527 319 172 18 3 289 30 324 1.99e-12 68.2
MS.gene40984.t1 MTR_2g043410 26.623 308 193 10 2 285 33 331 2.05e-12 68.2
MS.gene40984.t1 MTR_0242s0060 27.673 318 176 14 3 282 21 322 2.80e-12 67.8
MS.gene40984.t1 MTR_0242s0040 27.673 318 176 14 3 282 21 322 2.80e-12 67.8
MS.gene40984.t1 MTR_7g062100 26.006 323 174 15 3 290 36 328 3.09e-12 67.8
MS.gene40984.t1 MTR_5g022045 25.228 329 180 12 1 286 45 350 3.44e-12 67.8
MS.gene40984.t1 MTR_2g022000 26.111 360 193 16 2 304 27 370 3.58e-12 67.4
MS.gene40984.t1 MTR_5g043160 26.829 328 180 16 3 282 62 377 3.84e-12 67.4
MS.gene40984.t1 MTR_6g461660 26.205 332 171 14 2 284 30 336 3.85e-12 67.4
MS.gene40984.t1 MTR_5g057643 27.632 228 120 8 2 210 57 258 4.85e-12 65.9
MS.gene40984.t1 MTR_7g013590 28.302 318 178 14 2 296 47 337 5.02e-12 67.0
MS.gene40984.t1 MTR_7g055987 24.691 324 165 11 3 288 32 314 5.15e-12 66.6
MS.gene40984.t1 MTR_7g050520 26.433 314 160 13 3 280 34 312 5.41e-12 67.0
MS.gene40984.t1 MTR_6g004210 27.893 337 186 15 2 300 36 353 6.18e-12 66.6
MS.gene40984.t1 MTR_7g055930 24.940 417 224 20 3 347 25 424 6.46e-12 66.6
MS.gene40984.t1 MTR_4g013180 25.758 330 170 11 3 288 23 321 7.07e-12 66.6
MS.gene40984.t1 MTR_4g024890 25.083 303 185 12 2 280 21 305 7.44e-12 66.2
MS.gene40984.t1 MTR_8g039500 24.026 308 183 12 2 280 23 308 8.60e-12 65.9
MS.gene40984.t1 MTR_0097s0030 23.947 380 225 15 3 346 26 377 8.78e-12 66.2
MS.gene40984.t1 MTR_2g047240 23.947 380 225 15 3 346 26 377 8.78e-12 66.2
MS.gene40984.t1 MTR_3g437520 25.305 328 193 15 2 288 34 350 9.10e-12 66.2
MS.gene40984.t1 MTR_3g011120 27.273 308 174 16 2 280 25 311 9.53e-12 65.9
MS.gene40984.t1 MTR_3g030310 26.316 304 170 15 2 280 32 306 1.23e-11 65.9
MS.gene40984.t1 MTR_5g057040 31.313 198 94 10 2 179 57 232 1.44e-11 66.2
MS.gene40984.t1 MTR_7g017130 24.699 332 173 14 2 284 29 332 1.53e-11 65.5
MS.gene40984.t1 MTR_7g017170 24.699 332 173 14 2 284 29 332 1.59e-11 65.5
MS.gene40984.t1 MTR_7g050480 27.070 314 158 14 3 280 34 312 1.78e-11 65.1
MS.gene40984.t1 MTR_6g048140 26.280 293 183 10 2 280 50 323 1.84e-11 65.1
MS.gene40984.t1 MTR_4g134560 25.989 177 112 5 118 284 195 362 1.98e-11 65.5
MS.gene40984.t1 MTR_5g008530 65.957 47 14 1 1 47 28 72 2.32e-11 59.3
MS.gene40984.t1 MTR_5g097350 24.557 395 218 18 2 351 27 386 2.68e-11 64.7
MS.gene40984.t1 MTR_7g061050 26.498 317 170 14 3 285 25 312 2.90e-11 64.7
MS.gene40984.t1 MTR_7g055870 24.460 417 226 18 3 347 25 424 2.90e-11 64.7
MS.gene40984.t1 MTR_4g030980 23.544 395 220 16 3 333 27 403 3.26e-11 64.7
MS.gene40984.t1 MTR_5g064700 26.224 286 136 17 119 348 98 364 4.98e-11 63.9
MS.gene40984.t1 MTR_7g066000 24.543 383 232 16 3 346 37 401 5.64e-11 63.9
MS.gene40984.t1 MTR_5g027330 22.769 325 199 14 1 295 50 352 6.10e-11 63.9
MS.gene40984.t1 MTR_4g130330 27.957 372 176 21 2 319 18 351 6.24e-11 63.5
MS.gene40984.t1 MTR_3g009300 25.506 247 148 11 65 285 53 289 6.65e-11 63.2
MS.gene40984.t1 MTR_2g031700 25.984 254 127 11 2 231 17 233 7.40e-11 62.8
MS.gene40984.t1 MTR_4g023100 50.000 56 25 1 299 354 66 118 7.54e-11 59.3
MS.gene40984.t1 MTR_5g027370 22.531 324 201 14 1 295 39 341 9.35e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40984.t1 AT3G06240 28.646 384 227 15 1 347 46 419 2.67e-24 103
MS.gene40984.t1 AT4G12560 28.165 387 205 18 1 346 14 368 2.15e-19 89.0
MS.gene40984.t1 AT4G12560 28.165 387 205 18 1 346 14 368 2.15e-19 89.0
MS.gene40984.t1 AT4G12560 28.165 387 205 18 1 346 14 368 2.15e-19 89.0
MS.gene40984.t1 AT3G07870 27.848 316 175 13 2 287 39 331 8.05e-17 81.6
MS.gene40984.t1 AT1G33530 28.920 287 153 15 2 267 108 364 1.17e-16 81.3
MS.gene40984.t1 AT3G23880 26.821 302 175 10 1 282 24 299 1.37e-16 80.5
MS.gene40984.t1 AT4G22390 24.540 326 188 12 1 296 14 311 3.13e-12 67.8
MS.gene40984.t1 AT4G22390 24.540 326 188 12 1 296 14 311 3.28e-12 67.8

Find 81 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCTACGGATTGTGGTTTA+TGG 0.213999 1.3:+40634278 MS.gene40984:CDS
TTAGAGGATTTCTAAGTCTA+TGG 0.269614 1.3:+40634305 MS.gene40984:CDS
TTAGTAGAGTCAGTCTTTAA+TGG 0.282092 1.3:+40634142 MS.gene40984:CDS
ACGACGATACGGTTGATATA+TGG 0.294104 1.3:+40634338 MS.gene40984:CDS
ATTGTTCAAAATCTTATATA+TGG 0.302122 1.3:+40633897 MS.gene40984:CDS
AATTCACAGTTTCAACCTTC+AGG 0.325285 1.3:+40633704 MS.gene40984:CDS
TGTTGTTGCCTTTGATTTAG+TGG 0.332426 1.3:+40634210 MS.gene40984:CDS
TAGTAGAGTCAGTCTTTAAT+GGG 0.333603 1.3:+40634143 MS.gene40984:CDS
ACTACTTATGATACCGTTCA+TGG 0.346768 1.3:+40634412 MS.gene40984:CDS
AGGTTGAAACTGTGAATTTA+CGG 0.353135 1.3:-40633699 None:intergenic
TTCTACGGATTGTGGTTTAT+GGG 0.357215 1.3:+40634279 MS.gene40984:CDS
AAATCTATAGATCGAAATTC+AGG 0.360952 1.3:-40633749 None:intergenic
CGACGATACGGTTGATATAT+GGG 0.366063 1.3:+40634339 MS.gene40984:CDS
ATTTCTAAGTCTATGGGTTA+TGG 0.375932 1.3:+40634312 MS.gene40984:CDS
TCAAATCGGTTTGTAAATCA+TGG 0.379438 1.3:+40633591 MS.gene40984:CDS
AAACTTAAATGTGAAGCATT+AGG 0.385926 1.3:-40633959 None:intergenic
TGTGGTTTATGGGTATTTAG+AGG 0.386481 1.3:+40634289 MS.gene40984:CDS
TCTTTAATGGGGCTATTCAC+TGG 0.388768 1.3:+40634155 MS.gene40984:CDS
TATTGCAAAGATTCACGAAA+TGG 0.390999 1.3:+40634541 MS.gene40984:CDS
TTCAGTTTCATATGATTACT+TGG 0.394868 1.3:+40634027 MS.gene40984:CDS
TCGTGAATCTTTGCAATAGT+AGG 0.398959 1.3:-40634536 None:intergenic
TGAAGATCAAAATGAGATTC+CGG 0.400161 1.3:-40633836 None:intergenic
GAACGATAATCAATATCATC+TGG 0.402025 1.3:-40634259 None:intergenic
AAACTAGGGTTCAGTGGAAC+AGG 0.418034 1.3:-40633806 None:intergenic
AATACAAAGTGCAGTCATCT+TGG 0.424763 1.3:+40634371 MS.gene40984:CDS
CGAATCAACAGAGGATTACT+TGG 0.432662 1.3:+40634000 MS.gene40984:CDS
TCTCATTGCGAGCTAATGAA+TGG 0.436521 1.3:+40634056 MS.gene40984:CDS
GTTGGAACAGATTGCCGTAC+TGG 0.437052 1.3:+40634472 MS.gene40984:CDS
TAAGCTTCCTCGCTGTCACT+AGG 0.442156 1.3:-40634604 None:intergenic
CTTCTTCAACTCACACTCCT+AGG 0.444515 1.3:+40633663 MS.gene40984:CDS
GTCTCTTATCCGTTTCAAAT+CGG 0.446287 1.3:+40633577 MS.gene40984:CDS
TCAAAATGAGATTCCGGAAG+TGG 0.451896 1.3:-40633830 None:intergenic
ATTAAAGACTGACTCTACTA+AGG 0.451966 1.3:-40634140 None:intergenic
AAACGGATAAGAGACTTAAT+CGG 0.454069 1.3:-40633569 None:intergenic
TAATGGGGCTATTCACTGGT+TGG 0.454880 1.3:+40634159 MS.gene40984:CDS
ATTTACAAACCGATTTGAAA+CGG 0.464432 1.3:-40633586 None:intergenic
TCAGTTTCATATGATTACTT+GGG 0.465391 1.3:+40634028 MS.gene40984:CDS
CTTCACTAAAATAAAGCAAA+TGG 0.469098 1.3:-40634099 None:intergenic
TGATATTGATTATCGTTCTA+CGG 0.471118 1.3:+40634264 MS.gene40984:CDS
TAGAGGATTTCTAAGTCTAT+GGG 0.497173 1.3:+40634306 MS.gene40984:CDS
TTTCCTTTCCACTAAATCAA+AGG 0.497308 1.3:-40634218 None:intergenic
CTCATTGCGAGCTAATGAAT+GGG 0.499506 1.3:+40634057 MS.gene40984:CDS
GATTATCGTTCTACGGATTG+TGG 0.499803 1.3:+40634271 MS.gene40984:CDS
AGATCGAAATTCAGGAGTAT+AGG 0.500191 1.3:-40633741 None:intergenic
ACGGTTAAGAACAGAATCCT+AGG 0.511097 1.3:-40633680 None:intergenic
GGAGTATAGGTGAAGAGTGT+TGG 0.513256 1.3:-40633728 None:intergenic
GGTTATGGTGGACGACGATA+CGG 0.513716 1.3:+40634327 MS.gene40984:CDS
CATATTAAAGGTTCATGTAG+AGG 0.518393 1.3:+40633857 MS.gene40984:CDS
GATTCCGGAAGTGGAAAACT+AGG 0.519170 1.3:-40633821 None:intergenic
ATATTAAAGGTTCATGTAGA+GGG 0.531812 1.3:+40633858 MS.gene40984:CDS
CTTAAATGTGAAGCATTAGG+AGG 0.535227 1.3:-40633956 None:intergenic
TGTGAAGCATTAGGAGGGAA+AGG 0.535589 1.3:-40633950 None:intergenic
TAATGAATGGGAAGAAATTG+TGG 0.536494 1.3:+40634069 MS.gene40984:CDS
CAGTTTCATATGATTACTTG+GGG 0.542122 1.3:+40634029 MS.gene40984:CDS
TGTCTATGAAATCCAGTGGA+TGG 0.545801 1.3:-40633923 None:intergenic
TTCACGAAATGGATTCCGAT+TGG 0.548703 1.3:+40634552 MS.gene40984:CDS
TATATATGGAATCCATCCAC+TGG 0.555167 1.3:+40633911 MS.gene40984:CDS
TTAAAGACTGACTCTACTAA+GGG 0.559116 1.3:-40634139 None:intergenic
AACAGATTGCCGTACTGGAT+TGG 0.563604 1.3:+40634477 MS.gene40984:CDS
ACTCGGTATACATAGCCAAT+CGG 0.565695 1.3:-40634567 None:intergenic
TTGCCTTTGATTTAGTGGAA+AGG 0.569093 1.3:+40634215 MS.gene40984:CDS
AACGATAATCAATATCATCT+GGG 0.569232 1.3:-40634258 None:intergenic
TAATCAATATCATCTGGGAC+AGG 0.570575 1.3:-40634253 None:intergenic
AAGCTTCCTCGCTGTCACTA+GGG 0.589829 1.3:-40634603 None:intergenic
GTGAAGAGTGTTGGACCTGA+AGG 0.598704 1.3:-40633719 None:intergenic
TCTAAGTCTATGGGTTATGG+TGG 0.598732 1.3:+40634315 MS.gene40984:CDS
TACAAGGGAAACGCCATGAA+CGG 0.600180 1.3:-40634425 None:intergenic
CATATCTCACCAATCCAGTA+CGG 0.602204 1.3:-40634486 None:intergenic
CTCTACTAAGGGATAAACAA+AGG 0.626924 1.3:-40634128 None:intergenic
TTAAATGTGAAGCATTAGGA+GGG 0.627505 1.3:-40633955 None:intergenic
TTGGTGAGATATGATGAGGA+AGG 0.631695 1.3:+40634496 MS.gene40984:CDS
ATTCCGGAAGTGGAAAACTA+GGG 0.638843 1.3:-40633820 None:intergenic
AGTGGAAAACTAGGGTTCAG+TGG 0.646670 1.3:-40633812 None:intergenic
AGGTTCATTATAAACATCGT+CGG 0.659218 1.3:-40633786 None:intergenic
AGTAGAGTCAGTCTTTAATG+GGG 0.662815 1.3:+40634144 MS.gene40984:CDS
ACATCGTCGGTAAACAATGA+CGG 0.666823 1.3:-40633773 None:intergenic
TATTTGTCTATGAAATCCAG+TGG 0.670705 1.3:-40633927 None:intergenic
AGGGAGTGAAAGCAAAGACT+CGG 0.676821 1.3:-40634584 None:intergenic
TGGGTACGACGAATCAACAG+AGG 0.680849 1.3:+40633991 MS.gene40984:CDS
TGGATTGGTGAGATATGATG+AGG 0.686473 1.3:+40634492 MS.gene40984:CDS
TTCACTCCCTAGTGACAGCG+AGG 0.699783 1.3:+40634597 MS.gene40984:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTTCAAAATCTTATATA+TGG + chr1.3:40633897-40633916 MS.gene40984:CDS 15.0%
!!! ATTTAAGTTTTTATGGTTTT+GGG + chr1.3:40633972-40633991 MS.gene40984:CDS 15.0%
!!! CATTTAAGTTTTTATGGTTT+TGG + chr1.3:40633971-40633990 MS.gene40984:CDS 20.0%
!!! CATTTTGATCTTCATATTAA+AGG + chr1.3:40633845-40633864 MS.gene40984:CDS 20.0%
! AAATCTATAGATCGAAATTC+AGG - chr1.3:40633752-40633771 None:intergenic 25.0%
! AACGATAATCAATATCATCT+GGG - chr1.3:40634261-40634280 None:intergenic 25.0%
! ATATTAAAGGTTCATGTAGA+GGG + chr1.3:40633858-40633877 MS.gene40984:CDS 25.0%
! CTTCACTAAAATAAAGCAAA+TGG - chr1.3:40634102-40634121 None:intergenic 25.0%
! TCAGTTTCATATGATTACTT+GGG + chr1.3:40634028-40634047 MS.gene40984:CDS 25.0%
! TTCAGTTTCATATGATTACT+TGG + chr1.3:40634027-40634046 MS.gene40984:CDS 25.0%
!! AAACTTAAATGTGAAGCATT+AGG - chr1.3:40633962-40633981 None:intergenic 25.0%
!! TGATATTGATTATCGTTCTA+CGG + chr1.3:40634264-40634283 MS.gene40984:CDS 25.0%
!!! ATTTACAAACCGATTTGAAA+CGG - chr1.3:40633589-40633608 None:intergenic 25.0%
!!! GCTTCACATTTAAGTTTTTA+TGG + chr1.3:40633965-40633984 MS.gene40984:CDS 25.0%
AAACGGATAAGAGACTTAAT+CGG - chr1.3:40633572-40633591 None:intergenic 30.0%
ACAAAAAGTGGTGATATTGT+TGG + chr1.3:40634454-40634473 MS.gene40984:CDS 30.0%
AGGTTCATTATAAACATCGT+CGG - chr1.3:40633789-40633808 None:intergenic 30.0%
AGGTTGAAACTGTGAATTTA+CGG - chr1.3:40633702-40633721 None:intergenic 30.0%
CAGTTTCATATGATTACTTG+GGG + chr1.3:40634029-40634048 MS.gene40984:CDS 30.0%
CATATTAAAGGTTCATGTAG+AGG + chr1.3:40633857-40633876 MS.gene40984:CDS 30.0%
GAACGATAATCAATATCATC+TGG - chr1.3:40634262-40634281 None:intergenic 30.0%
TAATGAATGGGAAGAAATTG+TGG + chr1.3:40634069-40634088 MS.gene40984:CDS 30.0%
TAGAGGATTTCTAAGTCTAT+GGG + chr1.3:40634306-40634325 MS.gene40984:CDS 30.0%
TAGTAGAGTCAGTCTTTAAT+GGG + chr1.3:40634143-40634162 MS.gene40984:CDS 30.0%
TATTGCAAAGATTCACGAAA+TGG + chr1.3:40634541-40634560 MS.gene40984:CDS 30.0%
TATTTGTCTATGAAATCCAG+TGG - chr1.3:40633930-40633949 None:intergenic 30.0%
TGAAGATCAAAATGAGATTC+CGG - chr1.3:40633839-40633858 None:intergenic 30.0%
TTAGAGGATTTCTAAGTCTA+TGG + chr1.3:40634305-40634324 MS.gene40984:CDS 30.0%
TTAGTAGAGTCAGTCTTTAA+TGG + chr1.3:40634142-40634161 MS.gene40984:CDS 30.0%
TTTCCTTTCCACTAAATCAA+AGG - chr1.3:40634221-40634240 None:intergenic 30.0%
! ACTTTTTGTGCAACATACAA+GGG - chr1.3:40634443-40634462 None:intergenic 30.0%
! ATTAAAGACTGACTCTACTA+AGG - chr1.3:40634143-40634162 None:intergenic 30.0%
! ATTTCTAAGTCTATGGGTTA+TGG + chr1.3:40634312-40634331 MS.gene40984:CDS 30.0%
! TTAAAGACTGACTCTACTAA+GGG - chr1.3:40634142-40634161 None:intergenic 30.0%
! TTAAATGTGAAGCATTAGGA+GGG - chr1.3:40633958-40633977 None:intergenic 30.0%
!! TCAAATCGGTTTGTAAATCA+TGG + chr1.3:40633591-40633610 MS.gene40984:CDS 30.0%
AATACAAAGTGCAGTCATCT+TGG + chr1.3:40634371-40634390 MS.gene40984:CDS 35.0%
AATTCACAGTTTCAACCTTC+AGG + chr1.3:40633704-40633723 MS.gene40984:CDS 35.0%
ACTACTTATGATACCGTTCA+TGG + chr1.3:40634412-40634431 MS.gene40984:CDS 35.0%
AGTAGAGTCAGTCTTTAATG+GGG + chr1.3:40634144-40634163 MS.gene40984:CDS 35.0%
CTCTACTAAGGGATAAACAA+AGG - chr1.3:40634131-40634150 None:intergenic 35.0%
CTTGTATGTTGCACAAAAAG+TGG + chr1.3:40634442-40634461 MS.gene40984:CDS 35.0%
GTCTCTTATCCGTTTCAAAT+CGG + chr1.3:40633577-40633596 MS.gene40984:CDS 35.0%
TATATATGGAATCCATCCAC+TGG + chr1.3:40633911-40633930 MS.gene40984:CDS 35.0%
TCGTGAATCTTTGCAATAGT+AGG - chr1.3:40634539-40634558 None:intergenic 35.0%
TGTGGTTTATGGGTATTTAG+AGG + chr1.3:40634289-40634308 MS.gene40984:CDS 35.0%
! AGATCGAAATTCAGGAGTAT+AGG - chr1.3:40633744-40633763 None:intergenic 35.0%
! CTTAAATGTGAAGCATTAGG+AGG - chr1.3:40633959-40633978 None:intergenic 35.0%
! TAATCAATATCATCTGGGAC+AGG - chr1.3:40634256-40634275 None:intergenic 35.0%
! TGTTGTTGCCTTTGATTTAG+TGG + chr1.3:40634210-40634229 MS.gene40984:CDS 35.0%
! TTCTACGGATTGTGGTTTAT+GGG + chr1.3:40634279-40634298 MS.gene40984:CDS 35.0%
! TTGCCTTTGATTTAGTGGAA+AGG + chr1.3:40634215-40634234 MS.gene40984:CDS 35.0%
!! CACTTTTTGTGCAACATACA+AGG - chr1.3:40634444-40634463 None:intergenic 35.0%
ACATCGTCGGTAAACAATGA+CGG - chr1.3:40633776-40633795 None:intergenic 40.0%
ACGGTTAAGAACAGAATCCT+AGG - chr1.3:40633683-40633702 None:intergenic 40.0%
ACTCGGTATACATAGCCAAT+CGG - chr1.3:40634570-40634589 None:intergenic 40.0%
ATTCCGGAAGTGGAAAACTA+GGG - chr1.3:40633823-40633842 None:intergenic 40.0%
CATATCTCACCAATCCAGTA+CGG - chr1.3:40634489-40634508 None:intergenic 40.0%
CGAATCAACAGAGGATTACT+TGG + chr1.3:40634000-40634019 MS.gene40984:CDS 40.0%
CTCATTGCGAGCTAATGAAT+GGG + chr1.3:40634057-40634076 MS.gene40984:CDS 40.0%
TCAAAATGAGATTCCGGAAG+TGG - chr1.3:40633833-40633852 None:intergenic 40.0%
TCTCATTGCGAGCTAATGAA+TGG + chr1.3:40634056-40634075 MS.gene40984:CDS 40.0%
TCTTTAATGGGGCTATTCAC+TGG + chr1.3:40634155-40634174 MS.gene40984:CDS 40.0%
TGTCTATGAAATCCAGTGGA+TGG - chr1.3:40633926-40633945 None:intergenic 40.0%
TTGGTGAGATATGATGAGGA+AGG + chr1.3:40634496-40634515 MS.gene40984:CDS 40.0%
! ACGACGATACGGTTGATATA+TGG + chr1.3:40634338-40634357 MS.gene40984:CDS 40.0%
! CGACGATACGGTTGATATAT+GGG + chr1.3:40634339-40634358 MS.gene40984:CDS 40.0%
! GATTATCGTTCTACGGATTG+TGG + chr1.3:40634271-40634290 MS.gene40984:CDS 40.0%
! GTTCTACGGATTGTGGTTTA+TGG + chr1.3:40634278-40634297 MS.gene40984:CDS 40.0%
! TCTAAGTCTATGGGTTATGG+TGG + chr1.3:40634315-40634334 MS.gene40984:CDS 40.0%
! TTCACGAAATGGATTCCGAT+TGG + chr1.3:40634552-40634571 MS.gene40984:CDS 40.0%
!! TGGATTGGTGAGATATGATG+AGG + chr1.3:40634492-40634511 MS.gene40984:CDS 40.0%
AAACTAGGGTTCAGTGGAAC+AGG - chr1.3:40633809-40633828 None:intergenic 45.0%
AACAGATTGCCGTACTGGAT+TGG + chr1.3:40634477-40634496 MS.gene40984:CDS 45.0%
AGGGAGTGAAAGCAAAGACT+CGG - chr1.3:40634587-40634606 None:intergenic 45.0%
AGTGGAAAACTAGGGTTCAG+TGG - chr1.3:40633815-40633834 None:intergenic 45.0%
CTTCTTCAACTCACACTCCT+AGG + chr1.3:40633663-40633682 MS.gene40984:CDS 45.0%
GATTCCGGAAGTGGAAAACT+AGG - chr1.3:40633824-40633843 None:intergenic 45.0%
TAATGGGGCTATTCACTGGT+TGG + chr1.3:40634159-40634178 MS.gene40984:CDS 45.0%
TACAAGGGAAACGCCATGAA+CGG - chr1.3:40634428-40634447 None:intergenic 45.0%
! GGAGTATAGGTGAAGAGTGT+TGG - chr1.3:40633731-40633750 None:intergenic 45.0%
! TGTGAAGCATTAGGAGGGAA+AGG - chr1.3:40633953-40633972 None:intergenic 45.0%
!! GAACCCTAGTTTTCCACTTC+CGG + chr1.3:40633817-40633836 MS.gene40984:CDS 45.0%
AAGCTTCCTCGCTGTCACTA+GGG - chr1.3:40634606-40634625 None:intergenic 50.0%
GTTGGAACAGATTGCCGTAC+TGG + chr1.3:40634472-40634491 MS.gene40984:CDS 50.0%
TAAGCTTCCTCGCTGTCACT+AGG - chr1.3:40634607-40634626 None:intergenic 50.0%
TGGGTACGACGAATCAACAG+AGG + chr1.3:40633991-40634010 MS.gene40984:CDS 50.0%
!! GGTTATGGTGGACGACGATA+CGG + chr1.3:40634327-40634346 MS.gene40984:CDS 50.0%
!! GTGAAGAGTGTTGGACCTGA+AGG - chr1.3:40633722-40633741 None:intergenic 50.0%
TTCACTCCCTAGTGACAGCG+AGG + chr1.3:40634597-40634616 MS.gene40984:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 40633560 40634627 40633560 ID=MS.gene40984
chr1.3 mRNA 40633560 40634627 40633560 ID=MS.gene40984.t1;Parent=MS.gene40984
chr1.3 exon 40633560 40634627 40633560 ID=MS.gene40984.t1.exon1;Parent=MS.gene40984.t1
chr1.3 CDS 40633560 40634627 40633560 ID=cds.MS.gene40984.t1;Parent=MS.gene40984.t1
Gene Sequence

>MS.gene40984

ATGAGGTTACCGATTAAGTCTCTTATCCGTTTCAAATCGGTTTGTAAATCATGGTTTTCTCTTATCTCTTATAATCACTTTGCAAATTCACATTTTCAACTTACTTCTTCAACTCACACTCCTAGGATTCTGTTCTTAACCGTAAATTCACAGTTTCAACCTTCAGGTCCAACACTCTTCACCTATACTCCTGAATTTCGATCTATAGATTTACCGTCATTGTTTACCGACGATGTTTATAATGAACCTGTTCCACTGAACCCTAGTTTTCCACTTCCGGAATCTCATTTTGATCTTCATATTAAAGGTTCATGTAGAGGGTTTATATTTTTGCACAATTGTTCAAAATCTTATATATGGAATCCATCCACTGGATTTCATAGACAAATACCTTTCCCTCCTAATGCTTCACATTTAAGTTTTTATGGTTTTGGGTACGACGAATCAACAGAGGATTACTTGGTTGTTTCAGTTTCATATGATTACTTGGGGATTTTCTCATTGCGAGCTAATGAATGGGAAGAAATTGTGGATACTGTCCATTTGCTTTATTTTAGTGAAGACTCTTCCTTTGTTTATCCCTTAGTAGAGTCAGTCTTTAATGGGGCTATTCACTGGTTGGCTTTACGTCTTGATACACGTGACTATCTTGTTGTTGCCTTTGATTTAGTGGAAAGGAAACTTGTAGAGATTCCTGTCCCAGATGATATTGATTATCGTTCTACGGATTGTGGTTTATGGGTATTTAGAGGATTTCTAAGTCTATGGGTTATGGTGGACGACGATACGGTTGATATATGGGTAATGAAAGAATACAAAGTGCAGTCATCTTGGACTAAAGCTCTTGTTCTTACTACTTATGATACCGTTCATGGCGTTTCCCTTGTATGTTGCACAAAAAGTGGTGATATTGTTGGAACAGATTGCCGTACTGGATTGGTGAGATATGATGAGGAAGGAGAGTTTTTAGAGCATACCTACTATTGCAAAGATTCACGAAATGGATTCCGATTGGCTATGTATACCGAGTCTTTGCTTTCACTCCCTAGTGACAGCGAGGAAGCTTAA
Protein sequence

>MS.gene40984.t1

MRLPIKSLIRFKSVCKSWFSLISYNHFANSHFQLTSSTHTPRILFLTVNSQFQPSGPTLFTYTPEFRSIDLPSLFTDDVYNEPVPLNPSFPLPESHFDLHIKGSCRGFIFLHNCSKSYIWNPSTGFHRQIPFPPNASHLSFYGFGYDESTEDYLVVSVSYDYLGIFSLRANEWEEIVDTVHLLYFSEDSSFVYPLVESVFNGAIHWLALRLDTRDYLVVAFDLVERKLVEIPVPDDIDYRSTDCGLWVFRGFLSLWVMVDDDTVDIWVMKEYKVQSSWTKALVLTTYDTVHGVSLVCCTKSGDIVGTDCRTGLVRYDEEGEFLEHTYYCKDSRNGFRLAMYTESLLSLPSDSEEA