Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87586.t1 | XP_003605032.1 | 72.2 | 306 | 69 | 7 | 1 | 305 | 62 | 352 | 4.60E-117 | 431 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87586.t1 | Q9LIR8 | 26.5 | 249 | 152 | 12 | 33 | 272 | 105 | 331 | 6.0e-17 | 89.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87586.t1 | G7JVS7 | 72.2 | 306 | 69 | 7 | 1 | 305 | 62 | 352 | 3.3e-117 | 431.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87586.t1 | MTR_4g023080 | 71.987 | 307 | 70 | 7 | 1 | 306 | 62 | 353 | 7.71e-148 | 419 |
MS.gene87586.t1 | MTR_4g023380 | 68.769 | 333 | 56 | 6 | 1 | 307 | 69 | 379 | 1.08e-147 | 420 |
MS.gene87586.t1 | MTR_4g023090 | 68.615 | 325 | 77 | 6 | 1 | 307 | 69 | 386 | 7.03e-147 | 418 |
MS.gene87586.t1 | MTR_4g023440 | 67.752 | 307 | 53 | 4 | 1 | 307 | 72 | 332 | 5.84e-137 | 391 |
MS.gene87586.t1 | MTR_4g021785 | 68.730 | 307 | 83 | 5 | 1 | 307 | 62 | 355 | 6.07e-137 | 392 |
MS.gene87586.t1 | MTR_4g023130 | 66.667 | 285 | 80 | 6 | 23 | 306 | 42 | 312 | 2.38e-122 | 353 |
MS.gene87586.t1 | MTR_4g023070 | 58.750 | 320 | 112 | 6 | 1 | 306 | 56 | 369 | 1.52e-119 | 348 |
MS.gene87586.t1 | MTR_4g023120 | 57.944 | 321 | 115 | 6 | 1 | 307 | 56 | 370 | 5.77e-117 | 342 |
MS.gene87586.t1 | MTR_4g023190 | 59.740 | 308 | 108 | 7 | 1 | 305 | 63 | 357 | 1.65e-115 | 337 |
MS.gene87586.t1 | MTR_4g023200 | 59.740 | 308 | 109 | 7 | 1 | 305 | 63 | 358 | 9.91e-112 | 328 |
MS.gene87586.t1 | MTR_4g023150 | 59.091 | 308 | 111 | 7 | 1 | 305 | 63 | 358 | 1.71e-111 | 327 |
MS.gene87586.t1 | MTR_3g103020 | 58.065 | 310 | 117 | 8 | 5 | 307 | 75 | 378 | 1.45e-109 | 323 |
MS.gene87586.t1 | MTR_4g109270 | 55.591 | 313 | 119 | 9 | 3 | 307 | 64 | 364 | 7.84e-104 | 308 |
MS.gene87586.t1 | MTR_4g122850 | 56.918 | 318 | 119 | 11 | 1 | 307 | 54 | 364 | 1.06e-103 | 308 |
MS.gene87586.t1 | MTR_4g117720 | 54.574 | 317 | 124 | 9 | 3 | 307 | 70 | 378 | 1.15e-99 | 298 |
MS.gene87586.t1 | MTR_3g034160 | 55.031 | 318 | 122 | 8 | 3 | 306 | 64 | 374 | 3.60e-99 | 296 |
MS.gene87586.t1 | MTR_3g034180 | 53.125 | 320 | 127 | 9 | 3 | 307 | 178 | 489 | 5.97e-97 | 295 |
MS.gene87586.t1 | MTR_4g109280 | 52.751 | 309 | 133 | 6 | 3 | 307 | 60 | 359 | 5.53e-95 | 285 |
MS.gene87586.t1 | MTR_4g094365 | 52.564 | 312 | 131 | 9 | 3 | 307 | 63 | 364 | 4.99e-94 | 283 |
MS.gene87586.t1 | MTR_4g117770 | 54.902 | 306 | 120 | 8 | 11 | 307 | 71 | 367 | 1.16e-92 | 280 |
MS.gene87586.t1 | MTR_4g117810 | 54.902 | 306 | 120 | 8 | 11 | 307 | 71 | 367 | 1.16e-92 | 280 |
MS.gene87586.t1 | MTR_6g060650 | 52.564 | 312 | 127 | 8 | 9 | 306 | 68 | 372 | 2.98e-92 | 279 |
MS.gene87586.t1 | MTR_4g116330 | 56.343 | 268 | 105 | 6 | 44 | 307 | 121 | 380 | 3.28e-92 | 279 |
MS.gene87586.t1 | MTR_8g433040 | 53.420 | 307 | 112 | 9 | 11 | 307 | 79 | 364 | 1.03e-90 | 275 |
MS.gene87586.t1 | MTR_8g032380 | 53.420 | 307 | 112 | 9 | 11 | 307 | 79 | 364 | 1.03e-90 | 275 |
MS.gene87586.t1 | MTR_4g117780 | 53.922 | 306 | 123 | 8 | 11 | 307 | 71 | 367 | 1.74e-89 | 271 |
MS.gene87586.t1 | MTR_3g034130 | 52.013 | 298 | 125 | 7 | 3 | 288 | 64 | 355 | 8.43e-89 | 270 |
MS.gene87586.t1 | MTR_4g117870 | 49.351 | 308 | 112 | 7 | 3 | 307 | 1 | 267 | 1.17e-88 | 266 |
MS.gene87586.t1 | MTR_4g117850 | 53.420 | 307 | 117 | 12 | 9 | 304 | 85 | 376 | 4.65e-87 | 265 |
MS.gene87586.t1 | MTR_5g070130 | 48.089 | 314 | 149 | 7 | 5 | 307 | 67 | 377 | 5.28e-85 | 261 |
MS.gene87586.t1 | MTR_4g118380 | 50.000 | 302 | 123 | 7 | 3 | 282 | 62 | 357 | 3.12e-83 | 255 |
MS.gene87586.t1 | MTR_8g032390 | 49.667 | 300 | 117 | 9 | 9 | 302 | 99 | 370 | 5.53e-82 | 252 |
MS.gene87586.t1 | MTR_5g097210 | 49.355 | 310 | 139 | 10 | 1 | 304 | 63 | 360 | 2.18e-80 | 248 |
MS.gene87586.t1 | MTR_4g116320 | 60.274 | 219 | 76 | 6 | 91 | 304 | 43 | 255 | 4.95e-77 | 236 |
MS.gene87586.t1 | MTR_5g070080 | 46.273 | 322 | 145 | 9 | 9 | 307 | 70 | 386 | 3.85e-76 | 238 |
MS.gene87586.t1 | MTR_5g070088 | 43.478 | 322 | 157 | 6 | 9 | 307 | 67 | 386 | 7.56e-75 | 234 |
MS.gene87586.t1 | MTR_1g055195 | 46.000 | 300 | 134 | 9 | 18 | 307 | 197 | 478 | 5.62e-71 | 228 |
MS.gene87586.t1 | MTR_1g055135 | 44.025 | 318 | 144 | 10 | 9 | 307 | 73 | 375 | 5.74e-70 | 222 |
MS.gene87586.t1 | MTR_8g433030 | 55.708 | 219 | 88 | 7 | 87 | 302 | 125 | 337 | 7.86e-69 | 218 |
MS.gene87586.t1 | MTR_6g463430 | 58.333 | 204 | 74 | 5 | 107 | 307 | 7 | 202 | 1.54e-68 | 212 |
MS.gene87586.t1 | MTR_4g118400 | 45.645 | 287 | 113 | 8 | 25 | 301 | 41 | 294 | 7.09e-68 | 214 |
MS.gene87586.t1 | MTR_4g116330 | 47.761 | 268 | 89 | 6 | 44 | 307 | 121 | 341 | 7.28e-68 | 215 |
MS.gene87586.t1 | MTR_4g117750 | 46.452 | 310 | 139 | 10 | 9 | 306 | 64 | 358 | 8.28e-68 | 219 |
MS.gene87586.t1 | MTR_4g117750 | 58.036 | 112 | 41 | 3 | 197 | 305 | 373 | 481 | 6.14e-28 | 113 |
MS.gene87586.t1 | MTR_4g121580 | 46.488 | 299 | 118 | 12 | 8 | 297 | 74 | 339 | 1.61e-66 | 213 |
MS.gene87586.t1 | MTR_8g040935 | 53.774 | 212 | 88 | 5 | 102 | 307 | 1 | 208 | 6.12e-64 | 201 |
MS.gene87586.t1 | MTR_7g079370 | 41.346 | 312 | 155 | 9 | 9 | 301 | 48 | 350 | 1.72e-62 | 202 |
MS.gene87586.t1 | MTR_7g079400 | 44.000 | 325 | 146 | 14 | 6 | 307 | 26 | 337 | 3.03e-60 | 195 |
MS.gene87586.t1 | MTR_1g055165 | 39.159 | 309 | 126 | 9 | 5 | 307 | 66 | 318 | 4.11e-57 | 187 |
MS.gene87586.t1 | MTR_4g117530 | 44.578 | 249 | 91 | 6 | 64 | 307 | 47 | 253 | 1.21e-54 | 178 |
MS.gene87586.t1 | MTR_8g013010 | 51.923 | 208 | 89 | 6 | 3 | 206 | 109 | 309 | 1.59e-54 | 180 |
MS.gene87586.t1 | MTR_4g118370 | 44.444 | 252 | 107 | 10 | 59 | 304 | 33 | 257 | 2.81e-54 | 177 |
MS.gene87586.t1 | MTR_8g102520 | 39.048 | 315 | 148 | 12 | 3 | 307 | 42 | 322 | 3.29e-51 | 172 |
MS.gene87586.t1 | MTR_4g114700 | 39.245 | 265 | 101 | 4 | 43 | 298 | 5 | 218 | 1.63e-47 | 159 |
MS.gene87586.t1 | MTR_4g117430 | 56.667 | 150 | 53 | 4 | 58 | 206 | 14 | 152 | 1.66e-46 | 154 |
MS.gene87586.t1 | MTR_1g055175 | 45.226 | 199 | 96 | 7 | 115 | 306 | 8 | 200 | 5.88e-44 | 149 |
MS.gene87586.t1 | MTR_2g048580 | 35.690 | 297 | 151 | 13 | 20 | 307 | 77 | 342 | 3.22e-41 | 146 |
MS.gene87586.t1 | MTR_1g055250 | 39.810 | 211 | 115 | 7 | 88 | 294 | 51 | 253 | 5.21e-40 | 142 |
MS.gene87586.t1 | MTR_7g117720 | 55.474 | 137 | 54 | 4 | 9 | 139 | 52 | 187 | 2.22e-39 | 139 |
MS.gene87586.t1 | MTR_7g117720 | 59.302 | 86 | 29 | 2 | 222 | 301 | 186 | 271 | 3.28e-19 | 85.9 |
MS.gene87586.t1 | MTR_7g079420 | 36.201 | 279 | 122 | 9 | 46 | 307 | 905 | 1144 | 9.24e-39 | 145 |
MS.gene87586.t1 | MTR_4g116340 | 48.235 | 170 | 79 | 4 | 9 | 171 | 80 | 247 | 4.90e-37 | 132 |
MS.gene87586.t1 | MTR_5g023000 | 65.347 | 101 | 31 | 2 | 209 | 307 | 1 | 99 | 3.55e-35 | 123 |
MS.gene87586.t1 | MTR_4g118360 | 58.120 | 117 | 39 | 3 | 194 | 306 | 15 | 125 | 2.09e-34 | 122 |
MS.gene87586.t1 | MTR_4g122860 | 38.785 | 214 | 93 | 9 | 101 | 307 | 138 | 320 | 2.13e-32 | 122 |
MS.gene87586.t1 | MTR_8g098830 | 38.571 | 210 | 113 | 9 | 98 | 301 | 16 | 215 | 1.42e-30 | 115 |
MS.gene87586.t1 | MTR_4g023430 | 71.605 | 81 | 18 | 1 | 232 | 307 | 142 | 222 | 2.38e-30 | 114 |
MS.gene87586.t1 | MTR_7g079450 | 42.361 | 144 | 71 | 5 | 167 | 307 | 3 | 137 | 3.13e-24 | 95.9 |
MS.gene87586.t1 | MTR_4g023100 | 80.702 | 57 | 11 | 0 | 251 | 307 | 63 | 119 | 1.14e-23 | 94.0 |
MS.gene87586.t1 | MTR_6g034720 | 44.167 | 120 | 61 | 3 | 68 | 182 | 51 | 169 | 8.40e-21 | 89.0 |
MS.gene87586.t1 | MTR_7g070880 | 27.273 | 286 | 152 | 10 | 42 | 276 | 114 | 394 | 2.95e-20 | 90.9 |
MS.gene87586.t1 | MTR_4g133170 | 28.235 | 255 | 147 | 12 | 40 | 272 | 86 | 326 | 8.68e-20 | 89.0 |
MS.gene87586.t1 | MTR_2g021800 | 27.778 | 288 | 170 | 10 | 45 | 300 | 131 | 412 | 1.25e-19 | 89.0 |
MS.gene87586.t1 | MTR_7g056503 | 26.370 | 292 | 172 | 10 | 41 | 299 | 116 | 397 | 2.64e-19 | 87.8 |
MS.gene87586.t1 | MTR_2g022000 | 26.502 | 283 | 172 | 8 | 45 | 296 | 130 | 407 | 3.08e-18 | 85.1 |
MS.gene87586.t1 | MTR_7g070830 | 26.198 | 313 | 172 | 11 | 42 | 300 | 114 | 421 | 3.09e-18 | 84.7 |
MS.gene87586.t1 | MTR_1g097560 | 25.649 | 308 | 195 | 12 | 1 | 299 | 91 | 373 | 3.96e-18 | 84.3 |
MS.gene87586.t1 | MTR_4g117550 | 28.269 | 283 | 143 | 12 | 48 | 305 | 127 | 374 | 2.52e-17 | 82.0 |
MS.gene87586.t1 | MTR_1g097490 | 27.036 | 307 | 196 | 11 | 1 | 299 | 104 | 390 | 5.41e-17 | 80.9 |
MS.gene87586.t1 | MTR_1g055200 | 51.220 | 82 | 35 | 3 | 43 | 122 | 5 | 83 | 7.69e-17 | 75.1 |
MS.gene87586.t1 | MTR_7g062060 | 26.132 | 287 | 175 | 11 | 41 | 300 | 124 | 400 | 8.49e-17 | 80.5 |
MS.gene87586.t1 | MTR_2g046920 | 24.638 | 276 | 183 | 7 | 12 | 277 | 92 | 352 | 4.35e-16 | 78.2 |
MS.gene87586.t1 | MTR_1g097330 | 27.698 | 278 | 173 | 14 | 8 | 272 | 74 | 336 | 5.88e-16 | 78.2 |
MS.gene87586.t1 | MTR_8g013005 | 62.500 | 56 | 19 | 1 | 253 | 306 | 3 | 58 | 7.16e-16 | 71.2 |
MS.gene87586.t1 | MTR_4g122840 | 39.855 | 138 | 44 | 4 | 172 | 307 | 164 | 264 | 8.17e-16 | 76.3 |
MS.gene87586.t1 | MTR_2g021150 | 24.272 | 309 | 212 | 12 | 1 | 299 | 72 | 368 | 8.63e-16 | 77.4 |
MS.gene87586.t1 | MTR_8g101580 | 26.295 | 251 | 166 | 9 | 57 | 299 | 155 | 394 | 1.62e-15 | 76.6 |
MS.gene87586.t1 | MTR_2g021770 | 28.159 | 277 | 155 | 12 | 61 | 304 | 142 | 407 | 2.10e-15 | 76.6 |
MS.gene87586.t1 | MTR_4g070550 | 27.650 | 217 | 125 | 7 | 44 | 234 | 101 | 311 | 5.41e-15 | 75.1 |
MS.gene87586.t1 | MTR_5g022420 | 25.806 | 279 | 171 | 15 | 6 | 272 | 87 | 341 | 6.07e-15 | 75.1 |
MS.gene87586.t1 | MTR_5g097680 | 26.715 | 277 | 165 | 10 | 60 | 305 | 159 | 428 | 6.29e-15 | 75.1 |
MS.gene87586.t1 | MTR_5g069120 | 42.000 | 100 | 49 | 2 | 9 | 100 | 52 | 150 | 6.46e-15 | 72.0 |
MS.gene87586.t1 | MTR_2g426020 | 23.810 | 294 | 185 | 10 | 30 | 300 | 87 | 364 | 1.71e-14 | 73.9 |
MS.gene87586.t1 | MTR_2g055970 | 24.818 | 274 | 180 | 11 | 38 | 299 | 301 | 560 | 2.32e-14 | 73.9 |
MS.gene87586.t1 | MTR_7g079640 | 26.059 | 307 | 183 | 13 | 3 | 295 | 89 | 365 | 2.46e-14 | 73.2 |
MS.gene87586.t1 | MTR_4g130330 | 25.952 | 289 | 179 | 10 | 44 | 302 | 106 | 389 | 2.71e-14 | 73.2 |
MS.gene87586.t1 | MTR_5g037680 | 27.500 | 280 | 171 | 11 | 36 | 299 | 118 | 381 | 3.89e-14 | 72.8 |
MS.gene87586.t1 | MTR_7g078860 | 26.316 | 247 | 141 | 7 | 42 | 260 | 120 | 353 | 4.38e-14 | 72.4 |
MS.gene87586.t1 | MTR_3g083010 | 27.526 | 287 | 168 | 13 | 44 | 302 | 108 | 382 | 6.28e-14 | 72.0 |
MS.gene87586.t1 | MTR_2g038680 | 25.436 | 287 | 159 | 13 | 56 | 302 | 138 | 409 | 6.33e-14 | 72.0 |
MS.gene87586.t1 | MTR_6g086825 | 25.658 | 304 | 183 | 11 | 36 | 305 | 167 | 461 | 7.05e-14 | 72.0 |
MS.gene87586.t1 | MTR_0667s0010 | 27.801 | 241 | 130 | 12 | 28 | 234 | 72 | 302 | 1.03e-13 | 71.6 |
MS.gene87586.t1 | MTR_7g062100 | 27.099 | 262 | 148 | 9 | 42 | 272 | 119 | 368 | 1.20e-13 | 71.2 |
MS.gene87586.t1 | MTR_7g055930 | 24.038 | 312 | 151 | 14 | 40 | 283 | 116 | 409 | 2.42e-13 | 70.5 |
MS.gene87586.t1 | MTR_2g047832 | 24.252 | 301 | 193 | 8 | 2 | 277 | 87 | 377 | 2.68e-13 | 70.1 |
MS.gene87586.t1 | MTR_3g036290 | 29.557 | 203 | 113 | 9 | 42 | 239 | 117 | 294 | 3.98e-13 | 69.3 |
MS.gene87586.t1 | MTR_2g024110 | 27.273 | 286 | 175 | 14 | 44 | 304 | 93 | 370 | 4.50e-13 | 69.3 |
MS.gene87586.t1 | MTR_2g025420 | 25.321 | 312 | 177 | 12 | 24 | 297 | 84 | 377 | 4.56e-13 | 69.7 |
MS.gene87586.t1 | MTR_7g407070 | 27.698 | 278 | 165 | 15 | 44 | 299 | 135 | 398 | 4.56e-13 | 69.3 |
MS.gene87586.t1 | MTR_1g055145 | 50.649 | 77 | 33 | 2 | 149 | 225 | 131 | 202 | 5.50e-13 | 68.6 |
MS.gene87586.t1 | MTR_0129s0070 | 25.862 | 290 | 171 | 12 | 48 | 307 | 124 | 399 | 5.63e-13 | 69.3 |
MS.gene87586.t1 | MTR_2g021950 | 25.869 | 259 | 167 | 9 | 60 | 300 | 142 | 393 | 5.71e-13 | 69.3 |
MS.gene87586.t1 | MTR_0054s0090 | 25.085 | 295 | 174 | 12 | 44 | 302 | 121 | 404 | 6.13e-13 | 69.3 |
MS.gene87586.t1 | MTR_4g028660 | 26.481 | 287 | 171 | 10 | 44 | 300 | 119 | 395 | 7.57e-13 | 68.9 |
MS.gene87586.t1 | MTR_4g027450 | 26.481 | 287 | 171 | 10 | 44 | 300 | 119 | 395 | 7.57e-13 | 68.9 |
MS.gene87586.t1 | MTR_5g057790 | 29.259 | 270 | 159 | 14 | 44 | 299 | 142 | 393 | 8.20e-13 | 68.6 |
MS.gene87586.t1 | MTR_4g107820 | 27.755 | 245 | 148 | 11 | 40 | 272 | 128 | 355 | 8.84e-13 | 68.6 |
MS.gene87586.t1 | MTR_4g107780 | 27.755 | 245 | 148 | 11 | 40 | 272 | 128 | 355 | 8.84e-13 | 68.6 |
MS.gene87586.t1 | MTR_2g064960 | 73.171 | 41 | 9 | 1 | 268 | 306 | 18 | 58 | 9.08e-13 | 62.8 |
MS.gene87586.t1 | MTR_4g107780 | 27.755 | 245 | 148 | 11 | 40 | 272 | 128 | 355 | 9.53e-13 | 68.6 |
MS.gene87586.t1 | MTR_4g107820 | 27.755 | 245 | 148 | 11 | 40 | 272 | 128 | 355 | 1.03e-12 | 68.6 |
MS.gene87586.t1 | MTR_6g016285 | 23.718 | 312 | 177 | 12 | 41 | 299 | 114 | 417 | 1.17e-12 | 68.6 |
MS.gene87586.t1 | MTR_0128s0070 | 26.180 | 233 | 133 | 9 | 88 | 298 | 180 | 395 | 1.24e-12 | 68.2 |
MS.gene87586.t1 | MTR_5g069390 | 27.931 | 290 | 163 | 14 | 44 | 304 | 145 | 417 | 1.28e-12 | 68.6 |
MS.gene87586.t1 | MTR_1g068875 | 26.087 | 276 | 163 | 12 | 8 | 260 | 57 | 314 | 1.40e-12 | 67.8 |
MS.gene87586.t1 | MTR_7g055870 | 24.430 | 307 | 162 | 14 | 37 | 283 | 113 | 409 | 1.48e-12 | 68.2 |
MS.gene87586.t1 | MTR_5g097330 | 27.660 | 282 | 172 | 12 | 40 | 300 | 129 | 399 | 1.62e-12 | 67.8 |
MS.gene87586.t1 | MTR_5g022850 | 27.211 | 294 | 169 | 13 | 44 | 305 | 74 | 354 | 1.72e-12 | 67.4 |
MS.gene87586.t1 | MTR_8g063440 | 30.075 | 266 | 131 | 15 | 40 | 270 | 111 | 356 | 1.99e-12 | 67.4 |
MS.gene87586.t1 | MTR_7g077910 | 28.000 | 225 | 117 | 10 | 42 | 239 | 42 | 248 | 2.08e-12 | 67.0 |
MS.gene87586.t1 | MTR_2g426090 | 25.941 | 239 | 145 | 9 | 44 | 257 | 100 | 331 | 2.18e-12 | 67.4 |
MS.gene87586.t1 | MTR_4g061340 | 29.412 | 238 | 117 | 13 | 40 | 252 | 115 | 326 | 2.36e-12 | 67.4 |
MS.gene87586.t1 | MTR_5g057710 | 28.736 | 261 | 151 | 13 | 44 | 294 | 142 | 377 | 2.52e-12 | 67.4 |
MS.gene87586.t1 | MTR_4g055820 | 26.446 | 242 | 139 | 6 | 48 | 259 | 124 | 356 | 2.69e-12 | 67.0 |
MS.gene87586.t1 | MTR_4g109290 | 62.264 | 53 | 18 | 1 | 257 | 307 | 136 | 188 | 2.70e-12 | 64.7 |
MS.gene87586.t1 | MTR_5g096710 | 26.408 | 284 | 158 | 12 | 28 | 272 | 98 | 369 | 2.73e-12 | 67.0 |
MS.gene87586.t1 | MTR_8g066440 | 24.413 | 213 | 142 | 5 | 86 | 282 | 175 | 384 | 2.97e-12 | 67.0 |
MS.gene87586.t1 | MTR_7g066100 | 23.411 | 299 | 186 | 10 | 40 | 301 | 103 | 395 | 3.06e-12 | 67.0 |
MS.gene87586.t1 | MTR_3g013740 | 26.545 | 275 | 166 | 13 | 44 | 299 | 149 | 406 | 3.31e-12 | 67.0 |
MS.gene87586.t1 | MTR_2g021155 | 26.639 | 244 | 148 | 11 | 44 | 272 | 130 | 357 | 3.65e-12 | 67.4 |
MS.gene87586.t1 | MTR_2g031640 | 25.685 | 292 | 181 | 11 | 40 | 306 | 88 | 368 | 3.88e-12 | 66.6 |
MS.gene87586.t1 | MTR_8g467140 | 27.193 | 228 | 141 | 10 | 15 | 234 | 103 | 313 | 4.54e-12 | 66.2 |
MS.gene87586.t1 | MTR_4g037465 | 25.177 | 282 | 166 | 11 | 36 | 286 | 112 | 379 | 4.69e-12 | 66.6 |
MS.gene87586.t1 | MTR_7g055977 | 24.345 | 267 | 156 | 9 | 39 | 272 | 99 | 352 | 4.80e-12 | 66.2 |
MS.gene87586.t1 | MTR_6g004450 | 27.155 | 232 | 141 | 9 | 86 | 302 | 49 | 267 | 4.88e-12 | 65.5 |
MS.gene87586.t1 | MTR_5g011200 | 29.665 | 209 | 126 | 10 | 35 | 236 | 109 | 303 | 5.28e-12 | 66.2 |
MS.gene87586.t1 | MTR_1g068860 | 25.926 | 243 | 152 | 11 | 14 | 239 | 63 | 294 | 6.00e-12 | 65.9 |
MS.gene87586.t1 | MTR_2g026010 | 27.149 | 221 | 130 | 9 | 40 | 238 | 86 | 297 | 6.11e-12 | 66.2 |
MS.gene87586.t1 | MTR_7g445890 | 24.907 | 269 | 162 | 10 | 42 | 272 | 87 | 353 | 6.73e-12 | 65.9 |
MS.gene87586.t1 | MTR_2g425980 | 26.019 | 319 | 188 | 12 | 18 | 304 | 81 | 383 | 6.81e-12 | 65.9 |
MS.gene87586.t1 | MTR_7g078040 | 28.319 | 226 | 120 | 8 | 44 | 239 | 125 | 338 | 9.10e-12 | 65.9 |
MS.gene87586.t1 | MTR_0054s0100 | 25.253 | 297 | 173 | 12 | 44 | 302 | 121 | 406 | 9.26e-12 | 65.5 |
MS.gene87586.t1 | MTR_5g064700 | 23.322 | 283 | 167 | 11 | 60 | 304 | 98 | 368 | 9.78e-12 | 65.5 |
MS.gene87586.t1 | MTR_2g031720 | 24.739 | 287 | 194 | 11 | 39 | 307 | 91 | 373 | 9.90e-12 | 65.5 |
MS.gene87586.t1 | MTR_6g017295 | 26.316 | 285 | 164 | 14 | 3 | 257 | 1 | 269 | 1.00e-11 | 65.9 |
MS.gene87586.t1 | MTR_3g010390 | 25.108 | 231 | 157 | 6 | 44 | 262 | 136 | 362 | 1.01e-11 | 65.5 |
MS.gene87586.t1 | MTR_4g028680 | 25.952 | 289 | 174 | 10 | 44 | 302 | 120 | 398 | 1.05e-11 | 65.5 |
MS.gene87586.t1 | MTR_0707s0020 | 24.026 | 308 | 172 | 13 | 41 | 301 | 153 | 445 | 1.07e-11 | 65.5 |
MS.gene87586.t1 | MTR_3g010870 | 26.882 | 279 | 158 | 15 | 42 | 299 | 131 | 384 | 1.10e-11 | 65.5 |
MS.gene87586.t1 | MTR_8g039500 | 25.670 | 261 | 155 | 12 | 31 | 269 | 97 | 340 | 1.15e-11 | 65.1 |
MS.gene87586.t1 | MTR_1g088120 | 25.940 | 266 | 145 | 10 | 44 | 267 | 109 | 364 | 1.29e-11 | 65.1 |
MS.gene87586.t1 | MTR_5g057690 | 27.600 | 250 | 150 | 12 | 5 | 248 | 104 | 328 | 1.30e-11 | 65.1 |
MS.gene87586.t1 | MTR_5g092850 | 27.174 | 276 | 144 | 15 | 40 | 272 | 105 | 366 | 1.43e-11 | 65.1 |
MS.gene87586.t1 | MTR_4g031770 | 25.991 | 227 | 143 | 8 | 39 | 255 | 95 | 306 | 1.57e-11 | 64.7 |
MS.gene87586.t1 | MTR_2g426070 | 26.897 | 290 | 177 | 12 | 44 | 306 | 105 | 386 | 1.62e-11 | 64.7 |
MS.gene87586.t1 | MTR_5g072060 | 27.160 | 243 | 144 | 11 | 44 | 269 | 110 | 336 | 2.27e-11 | 64.7 |
MS.gene87586.t1 | MTR_6g017305 | 26.357 | 258 | 153 | 11 | 48 | 275 | 5 | 255 | 2.31e-11 | 63.5 |
MS.gene87586.t1 | MTR_2g024100 | 25.676 | 222 | 131 | 8 | 40 | 234 | 92 | 306 | 2.40e-11 | 64.3 |
MS.gene87586.t1 | MTR_2g066200 | 25.292 | 257 | 171 | 8 | 60 | 302 | 137 | 386 | 2.85e-11 | 63.9 |
MS.gene87586.t1 | MTR_0097s0030 | 24.809 | 262 | 151 | 11 | 41 | 274 | 107 | 350 | 2.87e-11 | 63.9 |
MS.gene87586.t1 | MTR_2g047240 | 24.809 | 262 | 151 | 11 | 41 | 274 | 107 | 350 | 2.87e-11 | 63.9 |
MS.gene87586.t1 | MTR_7g078960 | 27.919 | 197 | 119 | 8 | 60 | 245 | 22 | 206 | 3.04e-11 | 63.2 |
MS.gene87586.t1 | MTR_3g464470 | 25.896 | 251 | 141 | 12 | 42 | 260 | 99 | 336 | 3.08e-11 | 63.9 |
MS.gene87586.t1 | MTR_7g056760 | 24.830 | 294 | 176 | 13 | 41 | 299 | 121 | 404 | 3.41e-11 | 63.9 |
MS.gene87586.t1 | MTR_2g461450 | 24.000 | 250 | 156 | 9 | 31 | 260 | 95 | 330 | 3.77e-11 | 63.5 |
MS.gene87586.t1 | MTR_7g066030 | 24.415 | 299 | 177 | 12 | 42 | 300 | 114 | 403 | 4.31e-11 | 63.5 |
MS.gene87586.t1 | MTR_7g017040 | 26.246 | 301 | 171 | 16 | 41 | 305 | 114 | 399 | 4.34e-11 | 63.5 |
MS.gene87586.t1 | MTR_3g036335 | 26.482 | 253 | 153 | 13 | 60 | 299 | 162 | 394 | 4.79e-11 | 63.5 |
MS.gene87586.t1 | MTR_8g046310 | 26.531 | 196 | 127 | 7 | 44 | 234 | 125 | 308 | 5.15e-11 | 63.2 |
MS.gene87586.t1 | MTR_2g021920 | 25.103 | 243 | 144 | 9 | 86 | 300 | 37 | 269 | 5.86e-11 | 62.4 |
MS.gene87586.t1 | MTR_4g030980 | 24.662 | 296 | 169 | 12 | 28 | 279 | 123 | 408 | 6.21e-11 | 63.2 |
MS.gene87586.t1 | MTR_3g014570 | 25.926 | 270 | 172 | 8 | 44 | 299 | 123 | 378 | 6.80e-11 | 62.8 |
MS.gene87586.t1 | MTR_0128s0010 | 25.517 | 290 | 179 | 11 | 40 | 299 | 115 | 397 | 7.18e-11 | 62.8 |
MS.gene87586.t1 | MTR_4g028750 | 30.942 | 223 | 117 | 12 | 44 | 238 | 120 | 333 | 7.33e-11 | 62.8 |
MS.gene87586.t1 | MTR_3g014540 | 25.362 | 276 | 165 | 10 | 44 | 299 | 123 | 377 | 7.52e-11 | 62.8 |
MS.gene87586.t1 | MTR_8g064890 | 24.812 | 266 | 168 | 11 | 58 | 305 | 138 | 389 | 7.88e-11 | 62.8 |
MS.gene87586.t1 | MTR_5g056020 | 24.451 | 319 | 171 | 15 | 42 | 299 | 111 | 420 | 8.09e-11 | 62.8 |
MS.gene87586.t1 | MTR_3g013770 | 25.725 | 276 | 167 | 11 | 42 | 299 | 132 | 387 | 8.39e-11 | 62.8 |
MS.gene87586.t1 | MTR_7g077070 | 26.616 | 263 | 142 | 13 | 42 | 262 | 122 | 375 | 9.24e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene87586.t1 | AT3G06240 | 29.218 | 243 | 145 | 10 | 40 | 272 | 163 | 388 | 6.50e-18 | 84.0 |
MS.gene87586.t1 | AT3G23880 | 25.714 | 245 | 159 | 11 | 33 | 272 | 105 | 331 | 1.81e-13 | 70.5 |
MS.gene87586.t1 | AT1G32600 | 27.746 | 173 | 96 | 8 | 19 | 184 | 22 | 172 | 2.52e-11 | 63.5 |
Find 67 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTGTTGCCTTTGATTTAA+TGG | 0.113056 | 4.1:-74899484 | MS.gene87586:CDS |
ACCATGTTCTACTACTAATT+TGG | 0.157426 | 4.1:+74899752 | None:intergenic |
CATTCTGGTTTGTGGGTATT+TGG | 0.166612 | 4.1:-74899405 | MS.gene87586:CDS |
ATTAGTTACGATTTGATTAT+AGG | 0.211597 | 4.1:+74899677 | None:intergenic |
AGAAAAGGGTTGCTATTTAA+TGG | 0.222065 | 4.1:-74899552 | MS.gene87586:CDS |
ATAATTATACAGTTGAAATA+TGG | 0.229851 | 4.1:-74899344 | MS.gene87586:CDS |
ACTCTTGACCTTTCTGTTGA+TGG | 0.274042 | 4.1:-74899282 | MS.gene87586:CDS |
TTGGAGAATTTCTCAGTCTA+TGG | 0.276927 | 4.1:-74899386 | MS.gene87586:CDS |
TTGGCTTTGCATTGTGATTT+AGG | 0.292167 | 4.1:-74899516 | MS.gene87586:CDS |
GTAGAACATGGTCATGGTTT+TGG | 0.306417 | 4.1:-74899741 | MS.gene87586:CDS |
ATGATAAAGGACAACTATTA+AGG | 0.310438 | 4.1:-74899170 | MS.gene87586:CDS |
GAAAAGGGTTGCTATTTAAT+GGG | 0.312116 | 4.1:-74899551 | MS.gene87586:CDS |
TAATGCTGTTTCACCACATT+TGG | 0.316278 | 4.1:-74899658 | MS.gene87586:CDS |
TTAGTTACGATTTGATTATA+GGG | 0.330820 | 4.1:+74899678 | None:intergenic |
TATTTAATGGGGTTATTCAT+TGG | 0.346478 | 4.1:-74899539 | MS.gene87586:CDS |
ATTTCTCAGTCTATGGGATA+TGG | 0.353010 | 4.1:-74899379 | MS.gene87586:CDS |
TACAGAGCATTAGTACATTC+TGG | 0.361339 | 4.1:-74899420 | MS.gene87586:CDS |
TGAAACTAGATCTATAGATT+TGG | 0.373628 | 4.1:-74899961 | MS.gene87586:CDS |
TCTTCTTGCAGTTGCAGAAA+AGG | 0.375018 | 4.1:-74899567 | MS.gene87586:CDS |
AAGAAATCTTAGTTCTAGAT+TGG | 0.386816 | 4.1:-74899202 | MS.gene87586:CDS |
CATGAACCTCTAATTTCAAC+TGG | 0.398042 | 4.1:+74899870 | None:intergenic |
GGATTCCATATGTAGATGTT+TGG | 0.409871 | 4.1:+74899819 | None:intergenic |
CTTCTTGCAGTTGCAGAAAA+GGG | 0.422499 | 4.1:-74899566 | MS.gene87586:CDS |
CAAGAAGAGATGGCAACATA+AGG | 0.426838 | 4.1:+74899582 | None:intergenic |
ATTAGTACATTCTGGTTTGT+GGG | 0.428082 | 4.1:-74899412 | MS.gene87586:CDS |
CATTAGTACATTCTGGTTTG+TGG | 0.428815 | 4.1:-74899413 | MS.gene87586:CDS |
TAGTCAAAATCACTTGGAAT+AGG | 0.431393 | 4.1:+74899441 | None:intergenic |
TAATGGGGTTATTCATTGGT+TGG | 0.432729 | 4.1:-74899535 | MS.gene87586:CDS |
ATAGGTTGAAAGTAGTAATC+AGG | 0.434446 | 4.1:+74899255 | None:intergenic |
ATCTGAAGTTGTCATGTATA+CGG | 0.441550 | 4.1:-74899124 | MS.gene87586:CDS |
TAATTATACAGTTGAAATAT+GGG | 0.447592 | 4.1:-74899343 | MS.gene87586:CDS |
AACGACCAAACATCTACATA+TGG | 0.462629 | 4.1:-74899824 | MS.gene87586:CDS |
TTCAACTGGAAAATAAGATC+GGG | 0.464112 | 4.1:+74899884 | None:intergenic |
ACTACTAATTTGGAACGAAA+AGG | 0.465993 | 4.1:+74899762 | None:intergenic |
TTAAACTTGCTCATTGTCAC+CGG | 0.470224 | 4.1:+74899083 | None:intergenic |
AAAGTAATGTTGAGTGAAGC+AGG | 0.474703 | 4.1:+74899915 | None:intergenic |
CTTCCTTTCCATTAAATCAA+AGG | 0.474732 | 4.1:+74899476 | None:intergenic |
CCAGTCAAGAGATGATTACT+TGG | 0.479956 | 4.1:-74899712 | MS.gene87586:CDS |
TGGAGAATTTCTCAGTCTAT+GGG | 0.488704 | 4.1:-74899385 | MS.gene87586:CDS |
TTTCAACTGGAAAATAAGAT+CGG | 0.489177 | 4.1:+74899883 | None:intergenic |
TTGGTGAAGTATAATGATAA+AGG | 0.492510 | 4.1:-74899183 | MS.gene87586:CDS |
CTTTGCATTGTGATTTAGGT+CGG | 0.499151 | 4.1:-74899512 | MS.gene87586:CDS |
AATACAAAGTGCATTCGTCT+TGG | 0.503299 | 4.1:-74899311 | MS.gene87586:CDS |
GAAATTAGAGGTTCATGTAG+AGG | 0.505698 | 4.1:-74899864 | MS.gene87586:CDS |
TCTGCAACTGCAAGAAGAGA+TGG | 0.527547 | 4.1:+74899572 | None:intergenic |
AAATTAGAGGTTCATGTAGA+GGG | 0.527818 | 4.1:-74899863 | MS.gene87586:CDS |
GTCAAGAGATGATTACTTGG+TGG | 0.535085 | 4.1:-74899709 | MS.gene87586:CDS |
AAGAAGAGATGGCAACATAA+GGG | 0.541759 | 4.1:+74899583 | None:intergenic |
TTCAGATGGACTATTAAAGA+AGG | 0.541863 | 4.1:+74899140 | None:intergenic |
TCTCGTTTAGAGATAATACA+TGG | 0.549279 | 4.1:-74899629 | MS.gene87586:CDS |
TAATACATGGAAACAAATTG+AGG | 0.549896 | 4.1:-74899616 | MS.gene87586:CDS |
TACATATGGAATCCATCCAC+TGG | 0.550790 | 4.1:-74899810 | MS.gene87586:CDS |
CAGGAATGCCATCAACAGAA+AGG | 0.557378 | 4.1:+74899274 | None:intergenic |
ATATGTAGATGTTTGGTCGT+TGG | 0.557551 | 4.1:+74899826 | None:intergenic |
GAGTCTCTGCTTTCACTCCC+CGG | 0.557564 | 4.1:-74899102 | MS.gene87586:CDS |
AATACATGGAAACAAATTGA+GGG | 0.558519 | 4.1:-74899615 | MS.gene87586:CDS |
TAAACTTGCTCATTGTCACC+GGG | 0.560747 | 4.1:+74899084 | None:intergenic |
GCTCTGTAGTCAAAATCACT+TGG | 0.561634 | 4.1:+74899435 | None:intergenic |
CCAAGTAATCATCTCTTGAC+TGG | 0.573666 | 4.1:+74899712 | None:intergenic |
TTGCCTTTGATTTAATGGAA+AGG | 0.580450 | 4.1:-74899479 | MS.gene87586:CDS |
AAAAGGGTTGCTATTTAATG+GGG | 0.580733 | 4.1:-74899550 | MS.gene87586:CDS |
GTATACATGACAACTTCAGA+TGG | 0.612712 | 4.1:+74899126 | None:intergenic |
TTAGTAGTAGAACATGGTCA+TGG | 0.620803 | 4.1:-74899747 | MS.gene87586:CDS |
TTGGAACGAAAAGGAGACAC+AGG | 0.637002 | 4.1:+74899771 | None:intergenic |
TCAACTGGAAAATAAGATCG+GGG | 0.677195 | 4.1:+74899885 | None:intergenic |
TCCAAATTAGTAGTAGAACA+TGG | 0.694374 | 4.1:-74899753 | MS.gene87586:CDS |
AAACTTGCTCATTGTCACCG+GGG | 0.738393 | 4.1:+74899085 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTATACAGTTGAAATA+TGG | - | chr4.1:74899723-74899742 | MS.gene87586:CDS | 15.0% |
!! | TAATTATACAGTTGAAATAT+GGG | - | chr4.1:74899724-74899743 | MS.gene87586:CDS | 15.0% |
!! | ATTAGTTACGATTTGATTAT+AGG | + | chr4.1:74899393-74899412 | None:intergenic | 20.0% |
!! | TTAGTTACGATTTGATTATA+GGG | + | chr4.1:74899392-74899411 | None:intergenic | 20.0% |
!!! | TATTTGTTTTTTAAATCCAG+TGG | + | chr4.1:74899276-74899295 | None:intergenic | 20.0% |
! | AATACATGGAAACAAATTGA+GGG | - | chr4.1:74899452-74899471 | MS.gene87586:CDS | 25.0% |
! | ATGATAAAGGACAACTATTA+AGG | - | chr4.1:74899897-74899916 | MS.gene87586:CDS | 25.0% |
! | TAATACATGGAAACAAATTG+AGG | - | chr4.1:74899451-74899470 | MS.gene87586:CDS | 25.0% |
! | TATTTAATGGGGTTATTCAT+TGG | - | chr4.1:74899528-74899547 | MS.gene87586:CDS | 25.0% |
! | TGAAACTAGATCTATAGATT+TGG | - | chr4.1:74899106-74899125 | MS.gene87586:CDS | 25.0% |
! | TTGGTGAAGTATAATGATAA+AGG | - | chr4.1:74899884-74899903 | MS.gene87586:CDS | 25.0% |
! | TTTCAACTGGAAAATAAGAT+CGG | + | chr4.1:74899187-74899206 | None:intergenic | 25.0% |
!! | TATTTTCCAGTTGAAATTAG+AGG | - | chr4.1:74899191-74899210 | MS.gene87586:CDS | 25.0% |
!!! | AAGAAATCTTAGTTCTAGAT+TGG | - | chr4.1:74899865-74899884 | MS.gene87586:CDS | 25.0% |
AAATTAGAGGTTCATGTAGA+GGG | - | chr4.1:74899204-74899223 | MS.gene87586:CDS | 30.0% | |
ACCATGTTCTACTACTAATT+TGG | + | chr4.1:74899318-74899337 | None:intergenic | 30.0% | |
CTTCCTTTCCATTAAATCAA+AGG | + | chr4.1:74899594-74899613 | None:intergenic | 30.0% | |
TAGTCAAAATCACTTGGAAT+AGG | + | chr4.1:74899629-74899648 | None:intergenic | 30.0% | |
TCCAAATTAGTAGTAGAACA+TGG | - | chr4.1:74899314-74899333 | MS.gene87586:CDS | 30.0% | |
TCTCGTTTAGAGATAATACA+TGG | - | chr4.1:74899438-74899457 | MS.gene87586:CDS | 30.0% | |
TTCAACTGGAAAATAAGATC+GGG | + | chr4.1:74899186-74899205 | None:intergenic | 30.0% | |
! | ACTACTAATTTGGAACGAAA+AGG | + | chr4.1:74899308-74899327 | None:intergenic | 30.0% |
! | ATAGGTTGAAAGTAGTAATC+AGG | + | chr4.1:74899815-74899834 | None:intergenic | 30.0% |
! | ATCTGAAGTTGTCATGTATA+CGG | - | chr4.1:74899943-74899962 | MS.gene87586:CDS | 30.0% |
! | CATTGTTGCCTTTGATTTAA+TGG | - | chr4.1:74899583-74899602 | MS.gene87586:CDS | 30.0% |
! | TTGCCTTTGATTTAATGGAA+AGG | - | chr4.1:74899588-74899607 | MS.gene87586:CDS | 30.0% |
!! | AAAAGGGTTGCTATTTAATG+GGG | - | chr4.1:74899517-74899536 | MS.gene87586:CDS | 30.0% |
!! | AGAAAAGGGTTGCTATTTAA+TGG | - | chr4.1:74899515-74899534 | MS.gene87586:CDS | 30.0% |
!! | ATTAGTACATTCTGGTTTGT+GGG | - | chr4.1:74899655-74899674 | MS.gene87586:CDS | 30.0% |
!! | GAAAAGGGTTGCTATTTAAT+GGG | - | chr4.1:74899516-74899535 | MS.gene87586:CDS | 30.0% |
!! | TTCAGATGGACTATTAAAGA+AGG | + | chr4.1:74899930-74899949 | None:intergenic | 30.0% |
!!! | TGTTTTTTAAATCCAGTGGA+TGG | + | chr4.1:74899272-74899291 | None:intergenic | 30.0% |
AAAGTAATGTTGAGTGAAGC+AGG | + | chr4.1:74899155-74899174 | None:intergenic | 35.0% | |
AACGACCAAACATCTACATA+TGG | - | chr4.1:74899243-74899262 | MS.gene87586:CDS | 35.0% | |
AACGAGAAAAACTCCAAATG+TGG | + | chr4.1:74899425-74899444 | None:intergenic | 35.0% | |
AAGAAGAGATGGCAACATAA+GGG | + | chr4.1:74899487-74899506 | None:intergenic | 35.0% | |
AATACAAAGTGCATTCGTCT+TGG | - | chr4.1:74899756-74899775 | MS.gene87586:CDS | 35.0% | |
ATATGTAGATGTTTGGTCGT+TGG | + | chr4.1:74899244-74899263 | None:intergenic | 35.0% | |
ATTTCTCAGTCTATGGGATA+TGG | - | chr4.1:74899688-74899707 | MS.gene87586:CDS | 35.0% | |
CATGAACCTCTAATTTCAAC+TGG | + | chr4.1:74899200-74899219 | None:intergenic | 35.0% | |
CCTATACACTCTACCAAAAA+CGG | - | chr4.1:74899830-74899849 | MS.gene87586:CDS | 35.0% | |
CTTTGCATTGTGATTTAGGT+CGG | - | chr4.1:74899555-74899574 | MS.gene87586:CDS | 35.0% | |
GAAATTAGAGGTTCATGTAG+AGG | - | chr4.1:74899203-74899222 | MS.gene87586:CDS | 35.0% | |
GGATTCCATATGTAGATGTT+TGG | + | chr4.1:74899251-74899270 | None:intergenic | 35.0% | |
GTATACATGACAACTTCAGA+TGG | + | chr4.1:74899944-74899963 | None:intergenic | 35.0% | |
TAATGGGGTTATTCATTGGT+TGG | - | chr4.1:74899532-74899551 | MS.gene87586:CDS | 35.0% | |
TCAACTGGAAAATAAGATCG+GGG | + | chr4.1:74899185-74899204 | None:intergenic | 35.0% | |
TGGAGAATTTCTCAGTCTAT+GGG | - | chr4.1:74899682-74899701 | MS.gene87586:CDS | 35.0% | |
TTAGTAGTAGAACATGGTCA+TGG | - | chr4.1:74899320-74899339 | MS.gene87586:CDS | 35.0% | |
TTGGAGAATTTCTCAGTCTA+TGG | - | chr4.1:74899681-74899700 | MS.gene87586:CDS | 35.0% | |
! | TACAGAGCATTAGTACATTC+TGG | - | chr4.1:74899647-74899666 | MS.gene87586:CDS | 35.0% |
! | TTAAACTTGCTCATTGTCAC+CGG | + | chr4.1:74899987-74900006 | None:intergenic | 35.0% |
!! | CATTAGTACATTCTGGTTTG+TGG | - | chr4.1:74899654-74899673 | MS.gene87586:CDS | 35.0% |
!! | TAATGCTGTTTCACCACATT+TGG | - | chr4.1:74899409-74899428 | MS.gene87586:CDS | 35.0% |
!! | TGCAATAATATCGCCGTTTT+TGG | + | chr4.1:74899846-74899865 | None:intergenic | 35.0% |
!! | TTGGCTTTGCATTGTGATTT+AGG | - | chr4.1:74899551-74899570 | MS.gene87586:CDS | 35.0% |
ACTCTTGACCTTTCTGTTGA+TGG | - | chr4.1:74899785-74899804 | MS.gene87586:CDS | 40.0% | |
CAAGAAGAGATGGCAACATA+AGG | + | chr4.1:74899488-74899507 | None:intergenic | 40.0% | |
CCAAGTAATCATCTCTTGAC+TGG | + | chr4.1:74899358-74899377 | None:intergenic | 40.0% | |
CCAGTCAAGAGATGATTACT+TGG | - | chr4.1:74899355-74899374 | MS.gene87586:CDS | 40.0% | |
CTTCTTGCAGTTGCAGAAAA+GGG | - | chr4.1:74899501-74899520 | MS.gene87586:CDS | 40.0% | |
GCTCTGTAGTCAAAATCACT+TGG | + | chr4.1:74899635-74899654 | None:intergenic | 40.0% | |
GTCAAGAGATGATTACTTGG+TGG | - | chr4.1:74899358-74899377 | MS.gene87586:CDS | 40.0% | |
TACATATGGAATCCATCCAC+TGG | - | chr4.1:74899257-74899276 | MS.gene87586:CDS | 40.0% | |
TCTTCTTGCAGTTGCAGAAA+AGG | - | chr4.1:74899500-74899519 | MS.gene87586:CDS | 40.0% | |
! | GTAGAACATGGTCATGGTTT+TGG | - | chr4.1:74899326-74899345 | MS.gene87586:CDS | 40.0% |
! | TAAACTTGCTCATTGTCACC+GGG | + | chr4.1:74899986-74900005 | None:intergenic | 40.0% |
!! | CATTCTGGTTTGTGGGTATT+TGG | - | chr4.1:74899662-74899681 | MS.gene87586:CDS | 40.0% |
!!! | CCGTTTTTGGTAGAGTGTAT+AGG | + | chr4.1:74899833-74899852 | None:intergenic | 40.0% |
CAGGAATGCCATCAACAGAA+AGG | + | chr4.1:74899796-74899815 | None:intergenic | 45.0% | |
TCTGCAACTGCAAGAAGAGA+TGG | + | chr4.1:74899498-74899517 | None:intergenic | 45.0% | |
TTGGAACGAAAAGGAGACAC+AGG | + | chr4.1:74899299-74899318 | None:intergenic | 45.0% | |
! | AAACTTGCTCATTGTCACCG+GGG | + | chr4.1:74899985-74900004 | None:intergenic | 45.0% |
GAGTCTCTGCTTTCACTCCC+CGG | - | chr4.1:74899965-74899984 | MS.gene87586:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 74899083 | 74900006 | 74899083 | ID=MS.gene87586 |
chr4.1 | mRNA | 74899083 | 74900006 | 74899083 | ID=MS.gene87586.t1;Parent=MS.gene87586 |
chr4.1 | exon | 74899083 | 74900006 | 74899083 | ID=MS.gene87586.t1.exon1;Parent=MS.gene87586.t1 |
chr4.1 | CDS | 74899083 | 74900006 | 74899083 | ID=cds.MS.gene87586.t1;Parent=MS.gene87586.t1 |
Gene Sequence |
Protein sequence |