AlfalfaGEDB | MS.gene88776

M. sativa cultivar XinJiangDaYe / MS.gene88776

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88776.t1	XP_013454125.1	80.3	208	41	0	1	208	179	386	3.30E-95	357.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88776.t1	Q9SU30	31.2	128	78	5	18	136	177	303	5.9e-08	59.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88776.t1	A0A072UFC7	80.3	208	41	0	1	208	179	386	2.4e-95	357.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene44892	MS.gene88776	PPI
MS.gene58239	MS.gene88776	PPI
MS.gene066641	MS.gene88776	PPI
MS.gene88776	MS.gene58319	PPI
MS.gene88776	MS.gene034762	PPI
MS.gene88776	MS.gene71159	PPI
MS.gene88776	MS.gene59943	PPI
MS.gene000038	MS.gene88776	PPI
MS.gene88776	MS.gene033441	PPI
MS.gene064111	MS.gene88776	PPI
MS.gene39262	MS.gene88776	PPI
MS.gene053256	MS.gene88776	PPI
MS.gene88776	MS.gene035262	PPI
MS.gene025887	MS.gene88776	PPI
MS.gene75875	MS.gene88776	PPI
MS.gene88776	MS.gene060366	PPI
MS.gene88776	MS.gene028390	PPI
MS.gene041470	MS.gene88776	PPI
MS.gene058694	MS.gene88776	PPI
MS.gene88776	MS.gene40878	PPI
MS.gene88776	MS.gene44428	PPI
MS.gene88776	MS.gene96407	PPI
MS.gene88776	MS.gene058694	PPI
MS.gene88776	MS.gene035235	PPI
MS.gene006710	MS.gene88776	PPI
MS.gene88776	MS.gene058703	PPI
MS.gene88776	MS.gene57528	PPI
MS.gene44885	MS.gene88776	PPI
MS.gene011679	MS.gene88776	PPI
MS.gene88776	MS.gene024000	PPI
MS.gene88776	MS.gene012215	PPI
MS.gene64001	MS.gene88776	PPI
MS.gene88776	MS.gene50297	PPI
MS.gene88776	MS.gene033079	PPI
MS.gene88776	MS.gene059101	PPI
MS.gene88776	MS.gene033444	PPI
MS.gene88776	MS.gene58316	PPI
MS.gene77856	MS.gene88776	PPI
MS.gene88776	MS.gene033430	PPI
MS.gene88776	MS.gene58321	PPI
MS.gene88776	MS.gene87564	PPI
MS.gene88776	MS.gene36595	PPI
MS.gene88776	MS.gene024004	PPI
MS.gene88776	MS.gene045140	PPI
MS.gene63655	MS.gene88776	PPI
MS.gene060366	MS.gene88776	PPI
MS.gene88776	MS.gene061240	PPI
MS.gene88776	MS.gene041473	PPI
MS.gene41046	MS.gene88776	PPI
MS.gene88776	MS.gene50311	PPI
MS.gene017412	MS.gene88776	PPI
MS.gene57529	MS.gene88776	PPI
MS.gene88776	MS.gene88780	PPI
MS.gene88776	MS.gene058989	PPI
MS.gene88776	MS.gene036556	PPI
MS.gene80884	MS.gene88776	PPI
MS.gene88776	MS.gene57538	PPI
MS.gene88776	MS.gene041468	PPI
MS.gene88776	MS.gene060367	PPI
MS.gene88776	MS.gene058693	PPI
MS.gene88776	MS.gene27319	PPI
MS.gene009883	MS.gene88776	PPI
MS.gene88776	MS.gene64001	PPI
MS.gene88776	MS.gene015089	PPI
MS.gene88776	MS.gene041395	PPI
MS.gene40902	MS.gene88776	PPI
MS.gene88776	MS.gene42447	PPI
MS.gene033427	MS.gene88776	PPI
MS.gene88776	MS.gene51189	PPI
MS.gene88776	MS.gene046958	PPI
MS.gene041474	MS.gene88776	PPI
MS.gene27020	MS.gene88776	PPI
MS.gene88776	MS.gene24286	PPI
MS.gene88776	MS.gene066635	PPI
MS.gene066620	MS.gene88776	PPI
MS.gene035236	MS.gene88776	PPI
MS.gene88776	MS.gene044425	PPI
MS.gene51208	MS.gene88776	PPI
MS.gene88776	MS.gene40988	PPI
MS.gene62398	MS.gene88776	PPI
MS.gene88776	MS.gene24173	PPI
MS.gene88776	MS.gene036584	PPI
MS.gene88776	MS.gene036662	PPI
MS.gene60027	MS.gene88776	PPI
MS.gene35068	MS.gene88776	PPI
MS.gene041390	MS.gene88776	PPI
MS.gene90744	MS.gene88776	PPI
MS.gene51204	MS.gene88776	PPI
MS.gene036557	MS.gene88776	PPI
MS.gene50329	MS.gene88776	PPI
MS.gene88776	MS.gene035261	PPI
MS.gene88776	MS.gene072177	PPI
MS.gene88776	MS.gene023999	PPI
MS.gene88776	MS.gene69307	PPI
MS.gene57537	MS.gene88776	PPI
MS.gene059156	MS.gene88776	PPI
MS.gene88776	MS.gene036581	PPI
MS.gene84698	MS.gene88776	PPI
MS.gene88776	MS.gene019507	PPI
MS.gene88776	MS.gene033431	PPI
MS.gene88776	MS.gene000036	PPI
MS.gene82082	MS.gene88776	PPI
MS.gene88776	MS.gene50320	PPI
MS.gene50306	MS.gene88776	PPI
MS.gene88776	MS.gene58314	PPI
MS.gene88776	MS.gene87557	PPI
MS.gene88776	MS.gene51199	PPI
MS.gene88776	MS.gene035263	PPI
MS.gene88776	MS.gene67501	PPI
MS.gene88776	MS.gene96406	PPI
MS.gene88776	MS.gene27285	PPI
MS.gene57535	MS.gene88776	PPI
MS.gene88776	MS.gene51201	PPI
MS.gene88776	MS.gene77857	PPI
MS.gene88776	MS.gene50336	PPI
MS.gene87200	MS.gene88776	PPI
MS.gene88776	MS.gene57526	PPI
MS.gene58311	MS.gene88776	PPI
MS.gene88776	MS.gene069075	PPI
MS.gene033432	MS.gene88776	PPI
MS.gene59639	MS.gene88776	PPI
MS.gene88776	MS.gene047279	PPI
MS.gene88776	MS.gene060370	PPI
MS.gene88776	MS.gene50305	PPI
MS.gene88776	MS.gene024002	PPI
MS.gene88776	MS.gene032969	PPI
MS.gene066635	MS.gene88776	PPI
MS.gene88776	MS.gene68890	PPI
MS.gene88776	MS.gene041392	PPI
MS.gene88776	MS.gene42445	PPI
MS.gene010758	MS.gene88776	PPI
MS.gene88776	MS.gene86273	PPI
MS.gene88776	MS.gene26830	PPI
MS.gene87586	MS.gene88776	PPI
MS.gene88776	MS.gene40985	PPI
MS.gene88776	MS.gene22715	PPI
MS.gene88776	MS.gene038756	PPI
MS.gene88776	MS.gene92376	PPI
MS.gene50326	MS.gene88776	PPI
MS.gene88776	MS.gene51207	PPI
MS.gene88776	MS.gene63657	PPI
MS.gene88776	MS.gene059157	PPI
MS.gene88776	MS.gene023996	PPI
MS.gene50339	MS.gene88776	PPI
MS.gene88776	MS.gene57527	PPI
MS.gene88776	MS.gene070462	PPI
MS.gene88776	MS.gene031590	PPI
MS.gene42452	MS.gene88776	PPI
MS.gene88776	MS.gene066623	PPI
MS.gene88776	MS.gene064086	PPI
MS.gene88776	MS.gene035234	PPI
MS.gene063414	MS.gene88776	PPI
MS.gene88776	MS.gene064090	PPI
MS.gene88776	MS.gene24212	PPI
MS.gene88776	MS.gene066639	PPI
MS.gene88776	MS.gene50332	PPI
MS.gene88776	MS.gene024979	PPI
MS.gene88776	MS.gene90742	PPI
MS.gene88776	MS.gene041475	PPI
MS.gene88776	MS.gene43789	PPI
MS.gene88776	MS.gene64203	PPI
MS.gene051820	MS.gene88776	PPI
MS.gene26957	MS.gene88776	PPI
MS.gene97996	MS.gene88776	PPI
MS.gene036582	MS.gene88776	PPI
MS.gene88776	MS.gene24826	PPI
MS.gene88776	MS.gene40904	PPI
MS.gene58320	MS.gene88776	PPI
MS.gene88776	MS.gene43790	PPI
MS.gene88776	MS.gene032970	PPI
MS.gene27283	MS.gene88776	PPI
MS.gene88776	MS.gene57537	PPI
MS.gene58781	MS.gene88776	PPI
MS.gene88776	MS.gene40982	PPI
MS.gene88776	MS.gene54049	PPI
MS.gene011106	MS.gene88776	PPI
MS.gene88776	MS.gene59637	PPI
MS.gene44886	MS.gene88776	PPI
MS.gene87562	MS.gene88776	PPI
MS.gene88776	MS.gene033426	PPI
MS.gene88776	MS.gene27022	PPI
MS.gene88776	MS.gene57530	PPI
MS.gene40904	MS.gene88776	PPI
MS.gene92376	MS.gene88776	PPI
MS.gene88776	MS.gene97996	PPI
MS.gene000035	MS.gene88776	PPI
MS.gene88776	MS.gene87585	PPI
MS.gene87569	MS.gene88776	PPI
MS.gene88776	MS.gene024009	PPI
MS.gene88776	MS.gene036599	PPI
MS.gene87573	MS.gene88776	PPI
MS.gene88776	MS.gene40887	PPI
MS.gene88776	MS.gene87200	PPI
MS.gene041491	MS.gene88776	PPI
MS.gene88776	MS.gene42444	PPI
MS.gene88776	MS.gene67687	PPI
MS.gene88776	MS.gene26101	PPI
MS.gene019504	MS.gene88776	PPI
MS.gene88776	MS.gene006705	PPI
MS.gene88776	MS.gene061241	PPI
MS.gene059096	MS.gene88776	PPI
MS.gene88776	MS.gene035237	PPI
MS.gene88776	MS.gene51188	PPI
MS.gene88776	MS.gene033875	PPI
MS.gene006711	MS.gene88776	PPI
MS.gene58716	MS.gene88776	PPI
MS.gene88776	MS.gene38220	PPI
MS.gene88776	MS.gene50309	PPI
MS.gene033444	MS.gene88776	PPI
MS.gene019505	MS.gene88776	PPI
MS.gene045476	MS.gene88776	PPI
MS.gene88776	MS.gene041394	PPI
MS.gene58785	MS.gene88776	PPI
MS.gene88776	MS.gene03060	PPI
MS.gene034690	MS.gene88776	PPI
MS.gene88776	MS.gene036664	PPI
MS.gene88776	MS.gene024011	PPI
MS.gene26949	MS.gene88776	PPI
MS.gene88776	MS.gene053257	PPI
MS.gene88776	MS.gene58241	PPI
MS.gene88776	MS.gene77858	PPI
MS.gene88776	MS.gene064109	PPI
MS.gene036760	MS.gene88776	PPI
MS.gene88776	MS.gene058696	PPI
MS.gene88776	MS.gene009893	PPI
MS.gene88776	MS.gene045475	PPI
MS.gene88776	MS.gene63655	PPI
MS.gene77857	MS.gene88776	PPI
MS.gene88776	MS.gene39262	PPI
MS.gene57527	MS.gene88776	PPI
MS.gene51191	MS.gene88776	PPI
MS.gene88776	MS.gene77704	PPI
MS.gene88776	MS.gene062698	PPI
MS.gene033426	MS.gene88776	PPI
MS.gene50298	MS.gene88776	PPI
MS.gene88776	MS.gene033083	PPI
MS.gene67687	MS.gene88776	PPI
MS.gene88776	MS.gene63658	PPI
MS.gene88776	MS.gene40886	PPI
MS.gene88776	MS.gene033081	PPI
MS.gene88776	MS.gene036663	PPI
MS.gene88776	MS.gene68580	PPI
MS.gene019506	MS.gene88776	PPI
MS.gene88776	MS.gene57525	PPI
MS.gene058692	MS.gene88776	PPI
MS.gene88776	MS.gene030114	PPI
MS.gene88776	MS.gene58716	PPI
MS.gene69309	MS.gene88776	PPI
MS.gene88776	MS.gene045473	PPI
MS.gene63658	MS.gene88776	PPI
MS.gene88776	MS.gene50301	PPI
MS.gene88776	MS.gene88774	PPI
MS.gene88776	MS.gene045474	PPI
MS.gene88776	MS.gene036558	PPI
MS.gene88776	MS.gene27051	PPI
MS.gene034686	MS.gene88776	PPI
MS.gene88776	MS.gene40984	PPI
MS.gene070461	MS.gene88776	PPI
MS.gene88776	MS.gene064108	PPI
MS.gene88776	MS.gene016220	PPI
MS.gene88776	MS.gene24208	PPI
MS.gene88776	MS.gene58317	PPI
MS.gene88776	MS.gene063670	PPI
MS.gene88776	MS.gene51191	PPI
MS.gene87563	MS.gene88776	PPI
MS.gene88776	MS.gene57531	PPI
MS.gene88776	MS.gene58240	PPI
MS.gene041475	MS.gene88776	PPI
MS.gene88776	MS.gene27284	PPI
MS.gene88776	MS.gene96448	PPI
MS.gene88776	MS.gene063472	PPI
MS.gene81242	MS.gene88776	PPI
MS.gene88776	MS.gene57717	PPI
MS.gene88776	MS.gene034680	PPI
MS.gene88776	MS.gene31587	PPI
MS.gene88776	MS.gene27021	PPI
MS.gene88776	MS.gene48221	PPI
MS.gene88776	MS.gene044563	PPI
MS.gene88776	MS.gene50327	PPI
MS.gene88776	MS.gene066626	PPI
MS.gene88776	MS.gene50339	PPI
MS.gene51202	MS.gene88776	PPI
MS.gene88776	MS.gene063474	PPI
MS.gene88776	MS.gene51190	PPI
MS.gene88776	MS.gene58785	PPI
MS.gene88776	MS.gene044426	PPI
MS.gene88776	MS.gene88416	PPI
MS.gene88776	MS.gene034681	PPI
MS.gene88776	MS.gene57532	PPI
MS.gene88776	MS.gene003076	PPI
MS.gene88776	MS.gene033442	PPI
MS.gene26829	MS.gene88776	PPI
MS.gene064104	MS.gene88776	PPI
MS.gene88776	MS.gene009892	PPI
MS.gene43789	MS.gene88776	PPI
MS.gene88776	MS.gene058669	PPI
MS.gene88776	MS.gene066120	PPI
MS.gene88776	MS.gene51192	PPI
MS.gene072177	MS.gene88776	PPI
MS.gene58722	MS.gene88776	PPI
MS.gene88776	MS.gene041489	PPI
MS.gene064091	MS.gene88776	PPI
MS.gene88776	MS.gene40986	PPI
MS.gene88776	MS.gene36704	PPI
MS.gene88776	MS.gene034688	PPI
MS.gene88776	MS.gene58239	PPI
MS.gene50307	MS.gene88776	PPI
MS.gene43796	MS.gene88776	PPI
MS.gene88776	MS.gene24213	PPI
MS.gene88776	MS.gene033440	PPI
MS.gene88776	MS.gene31637	PPI
MS.gene58312	MS.gene88776	PPI
MS.gene88776	MS.gene034677	PPI
MS.gene88776	MS.gene055694	PPI
MS.gene88776	MS.gene035238	PPI
MS.gene88776	MS.gene85043	PPI
MS.gene88776	MS.gene064114	PPI
MS.gene88776	MS.gene87584	PPI
MS.gene88776	MS.gene87563	PPI
MS.gene58313	MS.gene88776	PPI
MS.gene88776	MS.gene58315	PPI
MS.gene066622	MS.gene88776	PPI
MS.gene88776	MS.gene80610	PPI
MS.gene44883	MS.gene88776	PPI
MS.gene88776	MS.gene90743	PPI
MS.gene88776	MS.gene053256	PPI
MS.gene036583	MS.gene88776	PPI
MS.gene88780	MS.gene88776	PPI
MS.gene87588	MS.gene88776	PPI
MS.gene88776	MS.gene85454	PPI
MS.gene88776	MS.gene064112	PPI
MS.gene88776	MS.gene041391	PPI
MS.gene96448	MS.gene88776	PPI
MS.gene88776	MS.gene033443	PPI
MS.gene041392	MS.gene88776	PPI
MS.gene88776	MS.gene036583	PPI
MS.gene88776	MS.gene006711	PPI
MS.gene88776	MS.gene57536	PPI
MS.gene88776	MS.gene50307	PPI
MS.gene069075	MS.gene88776	PPI
MS.gene88776	MS.gene51200	PPI
MS.gene88776	MS.gene021553	PPI
MS.gene88776	MS.gene44887	PPI
MS.gene88776	MS.gene058701	PPI
MS.gene031591	MS.gene88776	PPI
MS.gene88776	MS.gene87554	PPI
MS.gene88776	MS.gene009891	PPI
MS.gene88776	MS.gene064083	PPI
MS.gene88776	MS.gene048193	PPI
MS.gene88776	MS.gene58312	PPI
MS.gene041388	MS.gene88776	PPI
MS.gene88776	MS.gene58783	PPI
MS.gene88776	MS.gene024420	PPI
MS.gene88776	MS.gene57533	PPI
MS.gene96126	MS.gene88776	PPI
MS.gene88776	MS.gene024008	PPI
MS.gene88776	MS.gene50337	PPI
MS.gene016524	MS.gene88776	PPI
MS.gene88776	MS.gene54541	PPI
MS.gene88776	MS.gene39265	PPI
MS.gene87559	MS.gene88776	PPI
MS.gene88776	MS.gene50306	PPI
MS.gene88776	MS.gene041393	PPI
MS.gene88776	MS.gene060368	PPI
MS.gene88776	MS.gene053299	PPI
MS.gene88776	MS.gene28758	PPI
MS.gene88776	MS.gene044429	PPI
MS.gene88776	MS.gene42451	PPI
MS.gene88776	MS.gene50304	PPI
MS.gene31587	MS.gene88776	PPI
MS.gene033441	MS.gene88776	PPI
MS.gene88776	MS.gene041388	PPI
MS.gene88776	MS.gene019503	PPI
MS.gene063826	MS.gene88776	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88776.t1	MTR_5g070088	80.288	208	41	0	1	208	179	386	1.43e-121	350
MS.gene88776.t1	MTR_5g070130	62.791	215	71	2	1	208	165	377	1.35e-89	268
MS.gene88776.t1	MTR_5g070080	65.385	208	68	3	1	208	183	386	1.02e-88	266
MS.gene88776.t1	MTR_3g103020	51.500	200	94	2	7	204	177	375	1.28e-59	191
MS.gene88776.t1	MTR_4g117720	50.467	214	94	6	1	208	171	378	6.02e-58	187
MS.gene88776.t1	MTR_5g097210	51.707	205	91	5	1	202	159	358	1.51e-57	186
MS.gene88776.t1	MTR_6g060650	50.000	192	90	4	14	204	184	370	1.39e-55	181
MS.gene88776.t1	MTR_4g109280	49.206	189	90	4	14	200	168	352	1.47e-51	170
MS.gene88776.t1	MTR_1g055195	48.756	201	90	6	15	207	282	477	1.09e-50	171
MS.gene88776.t1	MTR_4g023080	47.692	195	89	4	14	204	166	351	1.16e-50	167
MS.gene88776.t1	MTR_4g023130	47.692	195	89	4	14	204	125	310	1.22e-50	166
MS.gene88776.t1	MTR_6g463430	44.390	205	107	2	1	204	1	199	1.44e-49	160
MS.gene88776.t1	MTR_4g116320	47.826	207	100	5	1	204	54	255	1.98e-49	161
MS.gene88776.t1	MTR_4g117750	48.585	212	94	6	1	202	148	354	3.16e-48	164
MS.gene88776.t1	MTR_4g117750	45.385	130	62	2	81	202	350	478	1.63e-23	97.4
MS.gene88776.t1	MTR_4g023090	44.286	210	97	5	14	208	182	386	6.06e-48	161
MS.gene88776.t1	MTR_4g116330	48.691	191	94	3	16	204	189	377	9.45e-48	160
MS.gene88776.t1	MTR_1g055175	46.667	195	95	6	15	204	8	198	1.29e-47	155
MS.gene88776.t1	MTR_1g055135	49.048	210	95	7	1	202	165	370	3.57e-47	159
MS.gene88776.t1	MTR_4g109270	45.178	197	96	3	14	204	171	361	4.76e-47	158
MS.gene88776.t1	MTR_1g055250	50.000	180	81	5	7	182	69	243	5.04e-47	157
MS.gene88776.t1	MTR_4g117850	46.341	205	103	5	1	200	171	373	5.76e-46	156
MS.gene88776.t1	MTR_3g034160	48.309	207	96	6	7	207	173	374	6.97e-46	155
MS.gene88776.t1	MTR_8g433030	47.573	206	98	7	1	203	140	338	1.87e-45	154
MS.gene88776.t1	MTR_4g118400	46.277	188	85	4	14	201	123	294	1.94e-45	152
MS.gene88776.t1	MTR_8g032390	47.573	206	98	7	1	203	173	371	4.48e-45	153
MS.gene88776.t1	MTR_4g118370	45.854	205	86	5	1	202	73	255	7.69e-45	150
MS.gene88776.t1	MTR_4g023120	44.335	203	97	4	14	204	169	367	4.33e-43	148
MS.gene88776.t1	MTR_3g034180	43.902	205	104	6	10	208	290	489	7.16e-43	150
MS.gene88776.t1	MTR_4g023070	42.396	217	108	4	1	204	155	367	8.09e-43	147
MS.gene88776.t1	MTR_8g040935	42.584	209	113	4	1	205	1	206	8.32e-43	143
MS.gene88776.t1	MTR_4g023150	45.918	196	95	7	14	204	168	357	2.61e-42	146
MS.gene88776.t1	MTR_4g021785	42.347	196	99	5	14	204	166	352	3.34e-42	145
MS.gene88776.t1	MTR_4g118380	48.000	175	78	4	15	180	187	357	3.34e-42	145
MS.gene88776.t1	MTR_4g023190	46.429	196	93	7	14	204	168	356	6.52e-42	145
MS.gene88776.t1	MTR_4g094365	45.789	190	98	4	14	201	172	358	9.84e-42	144
MS.gene88776.t1	MTR_3g034130	42.786	201	104	5	1	193	165	362	1.33e-41	144
MS.gene88776.t1	MTR_4g023380	41.475	217	99	5	15	208	168	379	2.52e-41	144
MS.gene88776.t1	MTR_4g023200	43.878	196	99	6	14	204	168	357	1.64e-39	139
MS.gene88776.t1	MTR_7g079370	44.271	192	99	4	16	203	165	352	1.18e-38	136
MS.gene88776.t1	MTR_7g079400	44.162	197	97	5	16	203	141	333	1.82e-38	135
MS.gene88776.t1	MTR_8g102520	42.268	194	101	6	16	203	130	318	1.96e-38	135
MS.gene88776.t1	MTR_1g055165	46.154	169	85	5	38	204	151	315	3.23e-38	134
MS.gene88776.t1	MTR_4g122850	41.748	206	111	7	1	202	159	359	3.25e-38	135
MS.gene88776.t1	MTR_4g117780	43.000	200	109	4	12	208	170	367	7.92e-37	132
MS.gene88776.t1	MTR_8g433040	43.590	195	97	6	14	208	183	364	5.25e-36	129
MS.gene88776.t1	MTR_8g032380	43.590	195	97	6	14	208	183	364	5.25e-36	129
MS.gene88776.t1	MTR_4g117770	42.640	197	110	2	14	208	172	367	2.10e-35	128
MS.gene88776.t1	MTR_4g117810	42.640	197	110	2	14	208	172	367	2.10e-35	128
MS.gene88776.t1	MTR_4g023440	40.476	210	74	8	1	208	172	332	1.62e-34	125
MS.gene88776.t1	MTR_4g117870	39.394	198	81	6	11	208	109	267	5.06e-32	117
MS.gene88776.t1	MTR_4g116330	40.838	191	70	3	16	204	189	338	6.99e-32	118
MS.gene88776.t1	MTR_7g079450	46.377	138	66	4	67	203	3	133	1.06e-30	110
MS.gene88776.t1	MTR_4g117530	38.830	188	80	4	15	202	96	248	1.70e-30	112
MS.gene88776.t1	MTR_4g118360	48.387	124	57	5	81	201	1	120	4.54e-28	102
MS.gene88776.t1	MTR_5g023000	56.842	95	39	1	108	202	2	94	9.33e-28	101
MS.gene88776.t1	MTR_2g048580	35.437	206	110	7	4	203	150	338	2.55e-26	103
MS.gene88776.t1	MTR_8g098830	40.244	164	89	5	16	175	35	193	4.00e-26	100
MS.gene88776.t1	MTR_4g122860	35.135	185	89	4	21	201	157	314	9.69e-24	96.7
MS.gene88776.t1	MTR_7g117720	58.621	87	32	2	120	202	186	272	1.86e-23	94.7
MS.gene88776.t1	MTR_7g079420	42.138	159	79	7	51	203	989	1140	1.16e-22	95.5
MS.gene88776.t1	MTR_4g121580	37.255	204	90	9	1	200	173	342	5.50e-22	92.4
MS.gene88776.t1	MTR_4g023430	53.659	82	34	2	130	208	142	222	7.00e-20	84.3
MS.gene88776.t1	MTR_8g013010	44.340	106	53	2	1	106	210	309	5.03e-17	78.2
MS.gene88776.t1	MTR_4g114700	51.136	88	40	1	114	198	131	218	1.15e-16	75.9
MS.gene88776.t1	MTR_4g117430	43.750	80	31	3	14	87	63	134	2.19e-12	62.8
MS.gene88776.t1	MTR_8g013005	58.824	51	21	0	152	202	4	54	4.43e-12	59.3
MS.gene88776.t1	MTR_4g023100	54.386	57	23	2	152	208	66	119	5.75e-12	60.8
MS.gene88776.t1	MTR_4g122840	35.606	132	48	4	73	203	165	260	1.07e-11	62.8
MS.gene88776.t1	MTR_1g055145	44.828	87	44	3	34	120	117	199	7.22e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 45 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACAAACATGCATAGTTTAT+TGG	0.206624	5.4:+55031797	MS.gene88776:CDS
GCCTTCCTACTCGCTGCTTT+TGG	0.288891	5.4:+55031739	MS.gene88776:CDS
AAAATACTGTCCTGCGAATA+AGG	0.289089	5.4:-55031426	None:intergenic
GAATCTCTGCTTTCAATTCC+TGG	0.293988	5.4:+55031903	MS.gene88776:CDS
TCCTACTGTGACAATGAATA+TGG	0.321509	5.4:+55031858	MS.gene88776:CDS
ATAAAGGTGCAGTTGAAATA+TGG	0.331433	5.4:+55031655	MS.gene88776:CDS
ATAAAGGATGTCTTGCTCTA+TGG	0.333566	5.4:+55031619	MS.gene88776:CDS
CTGTCCTTTGTCATTATACT+TGG	0.343254	5.4:-55031820	None:intergenic
CTAGTAGTGTGTATGAATTA+TGG	0.346010	5.4:+55031592	MS.gene88776:CDS
TGGGATCTTTCGTCTGATAA+AGG	0.394653	5.4:+55031639	MS.gene88776:CDS
ATATCAATTCGTGTTATTGT+TGG	0.407133	5.4:+55031507	MS.gene88776:CDS
TAGTAGTGTGTATGAATTAT+GGG	0.419654	5.4:+55031593	MS.gene88776:CDS
TCTCAAATGGTGCTCTTCAC+TGG	0.420308	5.4:+55031466	MS.gene88776:CDS
CATAATTCATACACACTACT+AGG	0.438164	5.4:-55031591	None:intergenic
AAATGGTGCTCTTCACTGGT+TGG	0.443938	5.4:+55031470	MS.gene88776:CDS
TATGAATTATGGGTGTATAA+AGG	0.444879	5.4:+55031603	MS.gene88776:CDS
AGAGCTCGGACTCGGTTCAT+AGG	0.446194	5.4:-55031325	None:intergenic
GGACCATACACGATATCATT+TGG	0.447942	5.4:-55031570	None:intergenic
TAAAGGATGTCTTGCTCTAT+GGG	0.453000	5.4:+55031620	MS.gene88776:CDS
TTGGCTTTCATTTAATTGAA+AGG	0.461881	5.4:+55031526	MS.gene88776:CDS
AATACAATGTGCAATCGTCT+TGG	0.487961	5.4:+55031688	MS.gene88776:CDS
TGATGGTATGCTATCTCACT+TGG	0.499072	5.4:+55031347	MS.gene88776:CDS
TTAGTGGAGTCGCTCTCAAA+TGG	0.507369	5.4:+55031453	MS.gene88776:CDS
TTGCCAAATGATATCGTGTA+TGG	0.511952	5.4:+55031567	MS.gene88776:CDS
TGTCCTGCGAATAAGGCAAA+AGG	0.515585	5.4:-55031419	None:intergenic
GAACCGAGTCCGAGCTCTGA+TGG	0.517994	5.4:+55031330	MS.gene88776:CDS
TTCTGTATACATAACCTTGA+GGG	0.520895	5.4:-55031883	None:intergenic
TAATGTGTGGAGCGCAATTG+AGG	0.536865	5.4:+55031389	MS.gene88776:CDS
TCAATTCCTGGTGGTGACAG+TGG	0.541479	5.4:+55031915	MS.gene88776:CDS
TAAAGGTGCAGTTGAAATAT+GGG	0.548466	5.4:+55031656	MS.gene88776:CDS
ATACCATCAGAGCTCGGACT+CGG	0.552731	5.4:-55031333	None:intergenic
TCCATATTCATTGTCACAGT+AGG	0.588381	5.4:-55031859	None:intergenic
TGCAGTTGAAATATGGGTGA+TGG	0.589143	5.4:+55031662	MS.gene88776:CDS
TCTCATTGAGAGCTAATGTG+TGG	0.589751	5.4:+55031376	MS.gene88776:CDS
ACTTGACCACTGTCACCACC+AGG	0.596131	5.4:-55031921	None:intergenic
GCCAAAAGCAGCGAGTAGGA+AGG	0.602964	5.4:-55031740	None:intergenic
AATGTGTGGAGCGCAATTGA+GGG	0.603196	5.4:+55031390	MS.gene88776:CDS
GATGGTATGCTATCTCACTT+GGG	0.616133	5.4:+55031348	MS.gene88776:CDS
CAATGAATATGGATCCCTCA+AGG	0.623502	5.4:+55031869	MS.gene88776:CDS
TTGGCCAAGTATAATGACAA+AGG	0.625260	5.4:+55031816	MS.gene88776:CDS
ATTCTGTATACATAACCTTG+AGG	0.635872	5.4:-55031884	None:intergenic
GATAGCATACCATCAGAGCT+CGG	0.646205	5.4:-55031339	None:intergenic
TTCGGCCAAAAGCAGCGAGT+AGG	0.672610	5.4:-55031744	None:intergenic
TCTCTGCTTTCAATTCCTGG+TGG	0.696103	5.4:+55031906	MS.gene88776:CDS
GTGTGGAGCGCAATTGAGGG+TGG	0.724694	5.4:+55031393	MS.gene88776:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AACAAACATGCATAGTTTAT+TGG	+	chr5.4:55031797-55031816	MS.gene88776:CDS	25.0%
!	TAGTAGTGTGTATGAATTAT+GGG	+	chr5.4:55031593-55031612	MS.gene88776:CDS	25.0%
!	TATGAATTATGGGTGTATAA+AGG	+	chr5.4:55031603-55031622	MS.gene88776:CDS	25.0%
!!	ATATCAATTCGTGTTATTGT+TGG	+	chr5.4:55031507-55031526	MS.gene88776:CDS	25.0%
!!	TTGGCTTTCATTTAATTGAA+AGG	+	chr5.4:55031526-55031545	MS.gene88776:CDS	25.0%
!!!	CCACTTTTTGTATAGTATTT+CGG	-	chr5.4:55031765-55031784	None:intergenic	25.0%
	ATTCTGTATACATAACCTTG+AGG	-	chr5.4:55031887-55031906	None:intergenic	30.0%
	CATAATTCATACACACTACT+AGG	-	chr5.4:55031594-55031613	None:intergenic	30.0%
	CCGAAATACTATACAAAAAG+TGG	+	chr5.4:55031762-55031781	MS.gene88776:CDS	30.0%
	CTAGTAGTGTGTATGAATTA+TGG	+	chr5.4:55031592-55031611	MS.gene88776:CDS	30.0%
	TTCTGTATACATAACCTTGA+GGG	-	chr5.4:55031886-55031905	None:intergenic	30.0%
!	ATAAAGGTGCAGTTGAAATA+TGG	+	chr5.4:55031655-55031674	MS.gene88776:CDS	30.0%
!	TAAAGGTGCAGTTGAAATAT+GGG	+	chr5.4:55031656-55031675	MS.gene88776:CDS	30.0%
!!	GGACAGTATTTTAAACTTAG+TGG	+	chr5.4:55031437-55031456	MS.gene88776:CDS	30.0%
	AAAATACTGTCCTGCGAATA+AGG	-	chr5.4:55031429-55031448	None:intergenic	35.0%
	AATACAATGTGCAATCGTCT+TGG	+	chr5.4:55031688-55031707	MS.gene88776:CDS	35.0%
	ACAAAAAGTGGTGATATCGT+TGG	+	chr5.4:55031774-55031793	MS.gene88776:CDS	35.0%
	ATAAAGGATGTCTTGCTCTA+TGG	+	chr5.4:55031619-55031638	MS.gene88776:CDS	35.0%
	CTGTCCTTTGTCATTATACT+TGG	-	chr5.4:55031823-55031842	None:intergenic	35.0%
	TAAAGGATGTCTTGCTCTAT+GGG	+	chr5.4:55031620-55031639	MS.gene88776:CDS	35.0%
	TCCATATTCATTGTCACAGT+AGG	-	chr5.4:55031862-55031881	None:intergenic	35.0%
	TCCTACTGTGACAATGAATA+TGG	+	chr5.4:55031858-55031877	MS.gene88776:CDS	35.0%
	TTGCCAAATGATATCGTGTA+TGG	+	chr5.4:55031567-55031586	MS.gene88776:CDS	35.0%
	TTGGCCAAGTATAATGACAA+AGG	+	chr5.4:55031816-55031835	MS.gene88776:CDS	35.0%
!	ACTCTTGTTCTGTCTTTTGA+TGG	+	chr5.4:55031717-55031736	MS.gene88776:CDS	35.0%
	CAATGAATATGGATCCCTCA+AGG	+	chr5.4:55031869-55031888	MS.gene88776:CDS	40.0%
	GAATCTCTGCTTTCAATTCC+TGG	+	chr5.4:55031903-55031922	MS.gene88776:CDS	40.0%
	GATGGTATGCTATCTCACTT+GGG	+	chr5.4:55031348-55031367	MS.gene88776:CDS	40.0%
	GGACCATACACGATATCATT+TGG	-	chr5.4:55031573-55031592	None:intergenic	40.0%
	TCTCATTGAGAGCTAATGTG+TGG	+	chr5.4:55031376-55031395	MS.gene88776:CDS	40.0%
	TGATGGTATGCTATCTCACT+TGG	+	chr5.4:55031347-55031366	MS.gene88776:CDS	40.0%
	TGCAGTTGAAATATGGGTGA+TGG	+	chr5.4:55031662-55031681	MS.gene88776:CDS	40.0%
	TGGGATCTTTCGTCTGATAA+AGG	+	chr5.4:55031639-55031658	MS.gene88776:CDS	40.0%
!!	TAACCTTTTGCCTTATTCGC+AGG	+	chr5.4:55031416-55031435	MS.gene88776:CDS	40.0%
	AAATGGTGCTCTTCACTGGT+TGG	+	chr5.4:55031470-55031489	MS.gene88776:CDS	45.0%
	AATGTGTGGAGCGCAATTGA+GGG	+	chr5.4:55031390-55031409	MS.gene88776:CDS	45.0%
	GATAGCATACCATCAGAGCT+CGG	-	chr5.4:55031342-55031361	None:intergenic	45.0%
	TAATGTGTGGAGCGCAATTG+AGG	+	chr5.4:55031389-55031408	MS.gene88776:CDS	45.0%
	TCTCAAATGGTGCTCTTCAC+TGG	+	chr5.4:55031466-55031485	MS.gene88776:CDS	45.0%
	TCTCTGCTTTCAATTCCTGG+TGG	+	chr5.4:55031906-55031925	MS.gene88776:CDS	45.0%
	TGTCCTGCGAATAAGGCAAA+AGG	-	chr5.4:55031422-55031441	None:intergenic	45.0%
	TTAGTGGAGTCGCTCTCAAA+TGG	+	chr5.4:55031453-55031472	MS.gene88776:CDS	45.0%
	ATACCATCAGAGCTCGGACT+CGG	-	chr5.4:55031336-55031355	None:intergenic	50.0%
!	TCAATTCCTGGTGGTGACAG+TGG	+	chr5.4:55031915-55031934	MS.gene88776:CDS	50.0%
	ACTTGACCACTGTCACCACC+AGG	-	chr5.4:55031924-55031943	None:intergenic	55.0%
	GCCAAAAGCAGCGAGTAGGA+AGG	-	chr5.4:55031743-55031762	None:intergenic	55.0%
	TTCGGCCAAAAGCAGCGAGT+AGG	-	chr5.4:55031747-55031766	None:intergenic	55.0%
!	AGAGCTCGGACTCGGTTCAT+AGG	-	chr5.4:55031328-55031347	None:intergenic	55.0%
!!	GCCTTCCTACTCGCTGCTTT+TGG	+	chr5.4:55031739-55031758	MS.gene88776:CDS	55.0%
	GTGTGGAGCGCAATTGAGGG+TGG	+	chr5.4:55031393-55031412	MS.gene88776:CDS	60.0%
!	GAACCGAGTCCGAGCTCTGA+TGG	+	chr5.4:55031330-55031349	MS.gene88776:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	55031321	55031947	55031321	ID=MS.gene88776
chr5.4	mRNA	55031321	55031947	55031321	ID=MS.gene88776.t1;Parent=MS.gene88776
chr5.4	exon	55031321	55031947	55031321	ID=MS.gene88776.t1.exon1;Parent=MS.gene88776.t1
chr5.4	CDS	55031321	55031947	55031321	ID=cds.MS.gene88776.t1;Parent=MS.gene88776.t1

Gene Sequence

>MS.gene88776

ATGTCCTATGAACCGAGTCCGAGCTCTGATGGTATGCTATCTCACTTGGGAATTTTCTCATTGAGAGCTAATGTGTGGAGCGCAATTGAGGGTGGTAACCTTTTGCCTTATTCGCAGGACAGTATTTTAAACTTAGTGGAGTCGCTCTCAAATGGTGCTCTTCACTGGTTGGCTTATCGTGATGATATATCAATTCGTGTTATTGTTGGCTTTCATTTAATTGAAAGGAAACTTCTTGAGTTGCGTTTGCCAAATGATATCGTGTATGGTCCTAGTAGTGTGTATGAATTATGGGTGTATAAAGGATGTCTTGCTCTATGGGATCTTTCGTCTGATAAAGGTGCAGTTGAAATATGGGTGATGGAAAAATACAATGTGCAATCGTCTTGGACTAAGACTCTTGTTCTGTCTTTTGATGGCCTTCCTACTCGCTGCTTTTGGCCGAAATACTATACAAAAAGTGGTGATATCGTTGGAACAAACATGCATAGTTTATTGGCCAAGTATAATGACAAAGGACAGCTGCAAGAGCATCACTCCTACTGTGACAATGAATATGGATCCCTCAAGGTTATGTATACAGAATCTCTGCTTTCAATTCCTGGTGGTGACAGTGGTCAAGTTTAA

Protein sequence

>MS.gene88776.t1

MSYEPSPSSDGMLSHLGIFSLRANVWSAIEGGNLLPYSQDSILNLVESLSNGALHWLAYRDDISIRVIVGFHLIERKLLELRLPNDIVYGPSSVYELWVYKGCLALWDLSSDKGAVEIWVMEKYNVQSSWTKTLVLSFDGLPTRCFWPKYYTKSGDIVGTNMHSLLAKYNDKGQLQEHHSYCDNEYGSLKVMYTESLLSIPGGDSGQV