AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041395


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041395.t1 MTR_4g116330 60.769 390 133 8 12 399 9 380 1.72e-153 438
MS.gene041395.t1 MTR_3g103020 58.777 376 138 8 25 399 19 378 5.14e-138 399
MS.gene041395.t1 MTR_4g116340 76.718 262 35 6 1 262 12 247 3.94e-135 387
MS.gene041395.t1 MTR_3g034180 55.919 397 149 12 10 398 110 488 8.13e-131 385
MS.gene041395.t1 MTR_4g109270 56.649 376 142 9 26 399 8 364 6.78e-130 378
MS.gene041395.t1 MTR_3g034130 57.022 356 133 7 25 372 8 351 1.19e-127 372
MS.gene041395.t1 MTR_4g109280 56.915 376 138 9 25 399 7 359 2.31e-126 369
MS.gene041395.t1 MTR_4g117850 53.906 384 142 10 21 395 19 376 3.29e-126 369
MS.gene041395.t1 MTR_6g060650 57.216 388 141 12 19 398 2 372 4.31e-126 369
MS.gene041395.t1 MTR_4g116330 53.846 390 121 9 12 399 9 341 2.91e-123 360
MS.gene041395.t1 MTR_3g034160 56.136 383 143 11 25 398 8 374 2.90e-121 356
MS.gene041395.t1 MTR_4g117780 52.196 387 160 10 17 399 2 367 3.86e-116 343
MS.gene041395.t1 MTR_4g117770 52.196 387 160 10 17 399 2 367 7.15e-113 335
MS.gene041395.t1 MTR_4g117810 52.196 387 160 10 17 399 2 367 7.15e-113 335
MS.gene041395.t1 MTR_5g070080 50.882 397 147 11 25 396 9 382 4.84e-112 333
MS.gene041395.t1 MTR_4g023090 50.000 392 163 11 16 393 6 378 2.07e-111 332
MS.gene041395.t1 MTR_4g122850 53.846 364 144 14 37 393 12 358 2.66e-111 331
MS.gene041395.t1 MTR_4g117720 51.571 382 125 13 25 399 50 378 3.38e-109 326
MS.gene041395.t1 MTR_4g094365 51.571 382 155 12 21 395 3 361 1.13e-108 324
MS.gene041395.t1 MTR_5g070130 50.388 387 166 11 18 396 5 373 5.42e-107 320
MS.gene041395.t1 MTR_4g118380 52.291 371 143 10 19 370 2 357 1.32e-105 316
MS.gene041395.t1 MTR_4g023080 49.602 377 152 11 25 396 8 351 5.13e-105 314
MS.gene041395.t1 MTR_8g032390 49.622 397 150 14 4 395 20 371 6.20e-105 315
MS.gene041395.t1 MTR_8g433040 49.746 394 154 14 13 399 8 364 1.33e-103 311
MS.gene041395.t1 MTR_8g032380 49.746 394 154 14 13 399 8 364 1.33e-103 311
MS.gene041395.t1 MTR_4g021785 49.468 376 161 9 25 399 8 355 4.84e-102 306
MS.gene041395.t1 MTR_4g023380 48.267 404 147 11 15 393 5 371 5.73e-102 307
MS.gene041395.t1 MTR_5g097210 49.344 381 165 12 18 394 2 358 7.30e-102 307
MS.gene041395.t1 MTR_4g023130 48.118 372 124 9 25 396 8 310 1.07e-97 294
MS.gene041395.t1 MTR_4g023070 45.876 388 170 12 26 396 3 367 1.78e-97 295
MS.gene041395.t1 MTR_1g055135 46.429 392 183 11 16 399 3 375 5.79e-97 294
MS.gene041395.t1 MTR_5g070088 46.193 394 177 9 23 396 4 382 4.91e-96 292
MS.gene041395.t1 MTR_4g117750 50.785 382 147 13 25 394 2 354 1.77e-94 291
MS.gene041395.t1 MTR_4g117750 62.617 107 38 1 287 393 373 477 4.68e-35 135
MS.gene041395.t1 MTR_4g023120 45.833 384 168 12 26 392 3 363 4.79e-94 286
MS.gene041395.t1 MTR_4g023440 45.641 390 141 11 16 399 8 332 5.90e-92 280
MS.gene041395.t1 MTR_4g116320 67.421 221 61 4 181 397 43 256 1.24e-90 274
MS.gene041395.t1 MTR_8g013010 52.881 295 122 7 9 302 37 315 1.24e-89 273
MS.gene041395.t1 MTR_4g023190 46.891 386 171 13 15 396 1 356 2.49e-88 271
MS.gene041395.t1 MTR_4g023150 46.632 386 173 13 15 396 1 357 5.19e-88 271
MS.gene041395.t1 MTR_4g121580 45.170 383 155 13 17 389 2 339 5.63e-87 269
MS.gene041395.t1 MTR_4g023200 47.150 386 171 13 15 396 1 357 2.48e-86 266
MS.gene041395.t1 MTR_1g055165 42.746 386 148 11 18 399 2 318 9.60e-83 256
MS.gene041395.t1 MTR_1g055195 47.213 305 115 10 108 399 207 478 1.18e-73 238
MS.gene041395.t1 MTR_8g040935 58.294 211 82 4 192 399 1 208 1.90e-72 226
MS.gene041395.t1 MTR_4g117870 45.484 310 117 11 89 398 8 265 1.14e-70 223
MS.gene041395.t1 MTR_8g433030 56.306 222 86 7 177 395 125 338 1.90e-69 222
MS.gene041395.t1 MTR_8g433030 52.941 102 39 4 4 103 20 114 9.00e-19 87.0
MS.gene041395.t1 MTR_4g118400 46.545 275 104 7 119 393 63 294 2.77e-67 215
MS.gene041395.t1 MTR_4g118370 49.231 260 90 9 140 394 33 255 4.35e-65 208
MS.gene041395.t1 MTR_8g102520 36.923 390 173 13 15 399 1 322 6.88e-63 205
MS.gene041395.t1 MTR_7g079370 40.563 355 179 14 55 395 16 352 1.20e-62 205
MS.gene041395.t1 MTR_2g048580 38.144 388 175 18 25 399 7 342 1.75e-60 199
MS.gene041395.t1 MTR_4g114700 44.944 267 87 7 127 390 9 218 5.50e-57 187
MS.gene041395.t1 MTR_6g463430 51.923 208 88 7 192 396 1 199 2.06e-56 184
MS.gene041395.t1 MTR_7g079400 41.115 287 145 8 121 399 67 337 4.62e-56 187
MS.gene041395.t1 MTR_1g055175 49.268 205 97 5 198 399 1 201 5.52e-54 178
MS.gene041395.t1 MTR_4g117530 41.961 255 100 6 145 399 47 253 2.82e-53 177
MS.gene041395.t1 MTR_1g055250 49.500 200 91 6 176 371 49 242 6.22e-50 171
MS.gene041395.t1 MTR_4g117430 52.795 161 55 4 140 299 15 155 1.27e-44 152
MS.gene041395.t1 MTR_4g122860 47.150 193 69 6 211 399 157 320 1.25e-40 147
MS.gene041395.t1 MTR_4g122860 39.091 110 66 1 13 122 57 165 2.21e-14 73.9
MS.gene041395.t1 MTR_4g118360 57.851 121 47 2 279 399 10 126 8.32e-39 135
MS.gene041395.t1 MTR_7g079420 36.552 290 118 12 126 399 905 1144 3.36e-37 144
MS.gene041395.t1 MTR_2g021150 30.513 390 220 17 22 391 10 368 1.03e-34 132
MS.gene041395.t1 MTR_4g108820 32.372 312 145 16 24 329 40 291 6.72e-34 128
MS.gene041395.t1 MTR_7g117720 41.014 217 94 8 15 229 1 185 1.15e-33 127
MS.gene041395.t1 MTR_7g117720 60.920 87 32 2 310 394 186 272 1.37e-22 96.7
MS.gene041395.t1 MTR_5g011200 29.526 359 186 15 1 336 1 315 3.79e-33 128
MS.gene041395.t1 MTR_1g094210 29.474 380 220 18 24 391 55 398 6.48e-33 127
MS.gene041395.t1 MTR_1g094210 30.423 355 202 17 24 366 55 376 8.33e-33 127
MS.gene041395.t1 MTR_4g107820 29.825 342 191 16 8 329 8 320 1.25e-32 127
MS.gene041395.t1 MTR_4g107780 29.825 342 191 16 8 329 8 320 1.25e-32 127
MS.gene041395.t1 MTR_4g107780 29.825 342 191 16 8 329 8 320 1.74e-32 127
MS.gene041395.t1 MTR_4g107820 29.825 342 191 16 8 329 8 320 1.89e-32 127
MS.gene041395.t1 MTR_4g109290 42.857 175 58 5 19 192 2 135 5.22e-32 120
MS.gene041395.t1 MTR_5g023000 59.406 101 39 1 299 399 1 99 5.55e-32 117
MS.gene041395.t1 MTR_5g022420 29.351 385 219 19 22 392 23 368 9.78e-32 124
MS.gene041395.t1 MTR_1g056710 29.897 388 215 16 1 365 1 354 2.82e-31 123
MS.gene041395.t1 MTR_8g101580 26.234 385 250 12 16 391 35 394 1.14e-30 121
MS.gene041395.t1 MTR_3g036290 31.861 317 175 11 22 333 18 298 1.30e-30 120
MS.gene041395.t1 MTR_8g098830 42.169 166 85 6 206 366 35 194 1.46e-30 117
MS.gene041395.t1 MTR_3g009310 30.218 321 181 14 20 326 35 326 2.16e-30 120
MS.gene041395.t1 MTR_5g069120 41.270 189 89 9 36 214 1 177 7.26e-29 111
MS.gene041395.t1 MTR_1g097560 29.330 358 202 20 22 365 32 352 9.18e-29 115
MS.gene041395.t1 MTR_1g054725 27.250 400 235 17 16 391 8 375 2.06e-28 115
MS.gene041395.t1 MTR_1g097490 28.267 375 227 17 26 391 49 390 5.16e-28 114
MS.gene041395.t1 MTR_8g467140 31.210 314 179 16 25 327 31 318 6.13e-28 112
MS.gene041395.t1 MTR_6g034720 51.200 125 53 3 151 274 53 170 6.27e-28 110
MS.gene041395.t1 MTR_6g027910 31.776 321 182 12 26 327 9 311 1.27e-27 112
MS.gene041395.t1 MTR_1g097330 30.721 319 176 14 24 329 14 300 3.30e-27 112
MS.gene041395.t1 MTR_3g010430 28.324 346 194 15 13 338 23 334 4.71e-27 112
MS.gene041395.t1 MTR_7g407070 31.014 345 191 17 22 339 28 352 1.35e-26 110
MS.gene041395.t1 MTR_2g028130 27.005 374 229 15 26 374 5 359 1.38e-26 110
MS.gene041395.t1 MTR_1g055070 27.044 318 174 10 18 292 41 343 1.47e-26 110
MS.gene041395.t1 MTR_2g055970 29.508 366 226 17 9 365 196 538 1.85e-26 111
MS.gene041395.t1 MTR_7g079450 45.775 142 70 4 258 399 3 137 2.35e-26 103
MS.gene041395.t1 MTR_1g115160 28.013 307 188 10 25 327 21 298 3.65e-26 108
MS.gene041395.t1 MTR_3g006570 30.031 323 194 16 13 327 8 306 3.75e-26 108
MS.gene041395.t1 MTR_4g055060 28.499 393 222 16 24 391 28 386 4.64e-26 108
MS.gene041395.t1 MTR_5g057710 30.275 327 176 13 26 335 46 337 8.19e-26 108
MS.gene041395.t1 MTR_5g057790 31.515 330 170 14 26 336 46 338 1.06e-25 107
MS.gene041395.t1 MTR_4g030830 28.365 416 223 16 23 391 6 393 1.08e-25 107
MS.gene041395.t1 MTR_2g024110 27.473 364 218 14 26 374 4 336 1.15e-25 107
MS.gene041395.t1 MTR_2g021190 25.781 384 239 11 24 391 19 372 1.39e-25 107
MS.gene041395.t1 MTR_5g057690 30.341 323 173 12 26 336 46 328 1.78e-25 107
MS.gene041395.t1 MTR_4g133170 27.410 332 210 13 26 348 4 313 3.12e-25 106
MS.gene041395.t1 MTR_6g065980 27.540 374 211 18 15 365 5 341 3.15e-25 105
MS.gene041395.t1 MTR_3g014540 28.846 364 202 15 22 366 25 350 3.77e-25 105
MS.gene041395.t1 MTR_3g083640 25.481 416 237 21 1 391 35 402 4.85e-25 105
MS.gene041395.t1 MTR_3g013740 28.657 335 183 12 26 333 44 349 6.36e-25 105
MS.gene041395.t1 MTR_3g036335 27.818 417 236 22 2 391 16 394 1.76e-24 104
MS.gene041395.t1 MTR_4g061340 30.154 325 176 16 22 326 22 315 2.74e-24 103
MS.gene041395.t1 MTR_3g007360 30.523 344 187 19 12 332 30 344 2.84e-24 103
MS.gene041395.t1 MTR_8g062660 29.102 323 186 13 23 327 19 316 3.42e-24 105
MS.gene041395.t1 MTR_1g050542 26.371 383 233 17 24 391 56 404 4.18e-24 103
MS.gene041395.t1 MTR_3g010590 29.341 334 190 15 4 327 14 311 6.00e-24 102
MS.gene041395.t1 MTR_3g007410 29.912 341 193 15 12 332 30 344 6.03e-24 102
MS.gene041395.t1 MTR_3g083010 27.394 376 230 13 26 374 6 365 8.01e-24 102
MS.gene041395.t1 MTR_3g013770 28.097 331 186 13 24 333 31 330 9.02e-24 102
MS.gene041395.t1 MTR_0044s0300 29.907 321 172 17 24 327 36 320 1.28e-23 101
MS.gene041395.t1 MTR_7g007300 27.607 326 183 14 19 330 96 382 1.65e-23 102
MS.gene041395.t1 MTR_6g004660 30.841 321 172 14 26 322 16 310 4.51e-23 100
MS.gene041395.t1 MTR_2g021155 27.389 314 199 11 21 327 31 322 7.05e-23 101
MS.gene041395.t1 MTR_2g021155 23.529 289 197 9 62 340 626 900 1.03e-11 67.4
MS.gene041395.t1 MTR_2g028160 27.660 376 226 18 26 374 5 361 9.95e-23 99.8
MS.gene041395.t1 MTR_2g046920 26.752 314 199 10 23 329 21 310 1.07e-22 99.0
MS.gene041395.t1 MTR_3g006670 28.743 334 167 15 22 326 45 336 1.07e-22 99.4
MS.gene041395.t1 MTR_3g011060 27.089 347 198 16 20 339 22 340 1.11e-22 99.0
MS.gene041395.t1 MTR_3g072470 25.624 441 219 16 22 391 15 417 1.85e-22 98.6
MS.gene041395.t1 MTR_3g023930 29.487 312 168 15 24 327 32 299 1.92e-22 98.2
MS.gene041395.t1 MTR_0667s0010 25.946 370 228 15 26 374 6 350 2.84e-22 98.2
MS.gene041395.t1 MTR_6g053260 27.500 320 199 12 18 327 329 625 3.11e-22 99.4
MS.gene041395.t1 MTR_1g054575 26.861 309 195 10 24 327 50 332 3.19e-22 99.4
MS.gene041395.t1 MTR_3g024110 27.187 320 201 13 19 334 94 385 3.50e-22 98.2
MS.gene041395.t1 MTR_3g007430 30.968 310 175 15 29 326 46 328 3.61e-22 97.4
MS.gene041395.t1 MTR_3g014570 27.492 331 192 14 22 335 25 324 3.63e-22 97.4
MS.gene041395.t1 MTR_2g046900 27.445 317 201 12 23 329 25 322 4.72e-22 97.1
MS.gene041395.t1 MTR_3g030240 26.506 332 199 13 4 327 15 309 5.79e-22 96.7
MS.gene041395.t1 MTR_4g031770 27.215 316 193 13 26 330 4 293 5.83e-22 96.7
MS.gene041395.t1 MTR_4g028660 26.683 416 242 16 17 394 7 397 7.01e-22 96.7
MS.gene041395.t1 MTR_4g027450 26.683 416 242 16 17 394 7 397 7.01e-22 96.7
MS.gene041395.t1 MTR_2g426020 27.446 368 224 13 26 374 6 349 7.06e-22 97.1
MS.gene041395.t1 MTR_0760s0010 29.968 317 157 13 31 327 52 323 8.32e-22 96.7
MS.gene041395.t1 MTR_7g056820 26.772 381 213 17 24 368 5 355 8.36e-22 96.3
MS.gene041395.t1 MTR_6g053240 27.463 335 177 13 22 327 24 321 8.87e-22 96.7
MS.gene041395.t1 MTR_4g023430 55.914 93 37 2 4 96 22 110 1.55e-21 92.4
MS.gene041395.t1 MTR_4g023430 53.086 81 37 1 320 399 142 222 9.69e-19 84.7
MS.gene041395.t1 MTR_7g070880 25.058 431 259 16 13 392 4 421 1.63e-21 95.9
MS.gene041395.t1 MTR_3g007330 29.712 313 183 13 22 326 44 327 1.74e-21 95.5
MS.gene041395.t1 MTR_5g057020 29.321 324 170 13 26 336 46 323 1.77e-21 95.1
MS.gene041395.t1 MTR_3g036430 28.846 312 159 14 24 327 18 274 2.27e-21 94.7
MS.gene041395.t1 MTR_7g056003 26.854 391 200 16 29 366 18 375 2.33e-21 95.5
MS.gene041395.t1 MTR_2g046830 29.141 326 195 15 23 338 22 321 3.12e-21 95.1
MS.gene041395.t1 MTR_1g068835 29.167 312 186 13 26 326 4 291 6.24e-21 94.0
MS.gene041395.t1 MTR_4g028510 27.139 409 258 16 17 398 7 402 6.67e-21 94.7
MS.gene041395.t1 MTR_8g073550 32.127 221 103 8 20 221 24 216 8.72e-21 90.9
MS.gene041395.t1 MTR_7g055930 27.423 423 233 19 29 391 16 424 1.10e-20 93.6
MS.gene041395.t1 MTR_3g010520 26.183 317 173 13 24 327 23 291 1.26e-20 92.8
MS.gene041395.t1 MTR_3g436150 31.845 336 182 17 22 334 28 339 1.28e-20 93.2
MS.gene041395.t1 MTR_4g037465 27.913 412 205 18 7 367 2 372 1.29e-20 93.2
MS.gene041395.t1 MTR_5g059430 25.734 443 253 20 1 390 1 420 1.43e-20 93.2
MS.gene041395.t1 MTR_7g055987 26.738 374 189 14 13 346 7 335 1.44e-20 92.8
MS.gene041395.t1 MTR_2g078900 29.022 317 183 14 22 327 29 314 1.51e-20 92.4
MS.gene041395.t1 MTR_7g079640 26.316 361 204 11 25 357 12 338 1.56e-20 92.8
MS.gene041395.t1 MTR_3g007270 25.676 370 233 15 24 371 45 394 1.87e-20 92.8
MS.gene041395.t1 MTR_3g030330 28.440 327 191 17 11 327 4 297 2.19e-20 92.0
MS.gene041395.t1 MTR_3g010970 28.435 313 170 13 28 327 50 321 2.23e-20 92.4
MS.gene041395.t1 MTR_3g006500 27.044 318 187 14 24 327 15 301 2.23e-20 92.0
MS.gene041395.t1 MTR_1g068860 29.618 314 184 14 26 326 4 293 2.35e-20 92.0
MS.gene041395.t1 MTR_4g024890 25.686 401 239 17 25 391 9 384 2.53e-20 92.0
MS.gene041395.t1 MTR_1g115185 24.700 417 255 14 2 391 15 399 3.21e-20 92.0
MS.gene041395.t1 MTR_1g114700 28.000 325 190 10 22 330 25 321 3.94e-20 91.7
MS.gene041395.t1 MTR_1g068875 28.882 322 173 14 26 326 4 290 3.96e-20 91.7
MS.gene041395.t1 MTR_7g055870 27.294 425 231 20 29 391 16 424 4.46e-20 92.0
MS.gene041395.t1 MTR_6g021880 26.684 386 217 14 37 391 31 381 5.21e-20 91.3
MS.gene041395.t1 MTR_6g086825 27.143 420 236 19 16 390 60 454 5.51e-20 91.7
MS.gene041395.t1 MTR_4g122840 44.203 138 39 4 263 399 164 264 5.58e-20 89.4
MS.gene041395.t1 MTR_1g055375 26.888 331 195 14 28 338 6 309 5.62e-20 90.9
MS.gene041395.t1 MTR_5g007610 28.483 323 186 17 24 326 39 336 5.64e-20 91.3
MS.gene041395.t1 MTR_2g021770 26.895 409 234 19 29 392 15 403 6.97e-20 91.3
MS.gene041395.t1 MTR_3g007300 28.125 384 200 17 22 391 45 366 7.56e-20 90.5
MS.gene041395.t1 MTR_0054s0090 26.150 413 259 16 15 392 1 402 8.19e-20 90.9
MS.gene041395.t1 MTR_3g010870 26.814 317 188 12 22 327 33 316 9.10e-20 90.5
MS.gene041395.t1 MTR_2g046800 26.265 415 229 16 22 391 10 392 1.14e-19 90.5
MS.gene041395.t1 MTR_2g426070 27.763 371 218 19 27 374 7 350 1.28e-19 90.1
MS.gene041395.t1 MTR_7g067680 27.614 373 204 17 4 358 28 352 1.37e-19 90.1
MS.gene041395.t1 MTR_0128s0070 29.058 382 214 17 13 360 9 367 1.44e-19 90.1
MS.gene041395.t1 MTR_6g090180 26.128 421 266 12 8 394 27 436 1.54e-19 90.5
MS.gene041395.t1 MTR_2g029990 28.115 313 194 12 27 330 52 342 1.70e-19 90.1
MS.gene041395.t1 MTR_4g129190 27.945 365 196 17 26 348 6 345 1.87e-19 89.7
MS.gene041395.t1 MTR_0128s0020 27.154 383 223 16 12 360 4 364 1.93e-19 89.7
MS.gene041395.t1 MTR_4g070550 26.875 320 198 12 26 322 5 311 2.09e-19 89.7
MS.gene041395.t1 MTR_3g030250 26.032 315 184 12 24 327 35 311 2.18e-19 89.4
MS.gene041395.t1 MTR_2g028140 28.012 332 185 15 26 322 5 317 2.78e-19 89.4
MS.gene041395.t1 MTR_3g011100 28.686 373 212 17 22 376 231 567 3.07e-19 90.1
MS.gene041395.t1 MTR_7g066850 25.575 391 226 15 11 360 8 374 3.23e-19 89.7
MS.gene041395.t1 MTR_5g069930 26.016 369 215 17 25 360 5 348 3.50e-19 88.6
MS.gene041395.t1 MTR_7g056390 24.276 449 217 17 22 392 14 417 4.27e-19 89.0
MS.gene041395.t1 MTR_7g070440 29.358 327 185 16 22 326 3 305 4.79e-19 88.2
MS.gene041395.t1 MTR_6g007135 26.087 391 231 17 29 391 29 389 5.91e-19 88.2
MS.gene041395.t1 MTR_5g069760 26.286 350 201 16 25 346 5 325 8.15e-19 87.4
MS.gene041395.t1 MTR_0097s0030 26.485 404 229 19 26 391 14 387 8.22e-19 87.8
MS.gene041395.t1 MTR_2g047240 26.485 404 229 19 26 391 14 387 8.22e-19 87.8
MS.gene041395.t1 MTR_1g055055 25.948 343 199 12 1 332 1 299 8.45e-19 87.0
MS.gene041395.t1 MTR_8g064890 28.184 369 209 20 16 353 6 349 9.03e-19 87.8
MS.gene041395.t1 MTR_7g070830 24.709 429 259 17 14 392 7 421 9.24e-19 87.8
MS.gene041395.t1 MTR_2g021050 26.590 346 191 14 26 348 5 310 9.91e-19 87.4
MS.gene041395.t1 MTR_7g017040 25.629 437 231 19 13 396 3 398 1.11e-18 87.4
MS.gene041395.t1 MTR_2g047832 27.371 369 210 18 2 338 3 345 1.13e-18 87.8
MS.gene041395.t1 MTR_2g426090 25.281 356 229 15 29 366 9 345 1.55e-18 87.0
MS.gene041395.t1 MTR_4g130330 26.866 402 234 17 25 389 6 384 1.68e-18 87.0
MS.gene041395.t1 MTR_3g010620 26.036 338 194 15 3 327 12 306 1.88e-18 86.7
MS.gene041395.t1 MTR_5g096710 29.231 325 183 14 22 322 19 320 2.09e-18 86.7
MS.gene041395.t1 MTR_1g112930 26.774 310 194 13 24 327 23 305 2.20e-18 86.3
MS.gene041395.t1 MTR_7g056760 25.537 419 263 17 5 391 3 404 2.58e-18 86.7
MS.gene041395.t1 MTR_2g021252 25.995 377 227 14 28 392 49 385 2.59e-18 86.3
MS.gene041395.t1 MTR_7g056503 24.129 402 265 16 16 391 10 397 3.41e-18 85.9
MS.gene041395.t1 MTR_3g030350 27.764 407 210 20 22 391 31 390 3.74e-18 85.9
MS.gene041395.t1 MTR_3g024150 28.254 315 177 16 28 327 37 317 3.78e-18 85.9
MS.gene041395.t1 MTR_3g009240 27.974 311 185 15 22 322 31 312 4.04e-18 85.9
MS.gene041395.t1 MTR_2g025420 23.499 383 236 14 26 374 6 365 4.06e-18 85.9
MS.gene041395.t1 MTR_7g062100 25.263 380 238 12 9 360 7 368 5.10e-18 85.5
MS.gene041395.t1 MTR_2g031680 26.814 317 186 12 26 326 6 292 6.83e-18 85.1
MS.gene041395.t1 MTR_7g066030 24.939 413 236 20 25 392 20 403 7.70e-18 85.1
MS.gene041395.t1 MTR_2g425980 27.077 325 196 16 26 326 5 312 9.00e-18 84.7
MS.gene041395.t1 MTR_6g013270 26.113 337 206 14 20 339 23 333 9.29e-18 84.7
MS.gene041395.t1 MTR_3g030310 27.697 343 190 18 20 338 15 323 1.24e-17 84.3
MS.gene041395.t1 MTR_7g016930 30.060 336 168 19 16 323 9 305 1.33e-17 83.6
MS.gene041395.t1 MTR_0115s0020 24.574 411 247 15 26 395 10 398 1.72e-17 84.0
MS.gene041395.t1 MTR_7g056290 24.201 438 215 17 29 391 25 420 1.75e-17 84.0
MS.gene041395.t1 MTR_8g464770 27.735 393 234 21 25 393 11 377 1.92e-17 83.6
MS.gene041395.t1 MTR_0129s0050 25.424 413 234 15 29 392 17 404 2.03e-17 84.0
MS.gene041395.t1 MTR_7g091640 27.042 355 213 14 1 324 1 340 2.32e-17 83.2
MS.gene041395.t1 MTR_2g104340 25.647 425 241 18 10 392 1 392 2.38e-17 83.6
MS.gene041395.t1 MTR_8g099460 28.889 315 192 14 26 326 5 301 2.56e-17 83.6
MS.gene041395.t1 MTR_0064s0160 26.629 353 201 17 9 322 21 354 2.73e-17 83.6
MS.gene041395.t1 MTR_8g039500 27.717 368 206 18 25 367 11 343 2.76e-17 82.8
MS.gene041395.t1 MTR_7g061060 30.183 328 174 16 23 322 10 310 2.94e-17 83.2
MS.gene041395.t1 MTR_2g028110 28.221 326 177 16 26 326 4 297 3.20e-17 83.2
MS.gene041395.t1 MTR_8g013005 62.295 61 21 1 339 399 1 59 3.23e-17 75.5
MS.gene041395.t1 MTR_7g028660 27.701 361 214 15 21 355 5 344 4.17e-17 82.8
MS.gene041395.t1 MTR_7g056710 27.671 365 201 18 20 352 13 346 4.23e-17 82.8
MS.gene041395.t1 MTR_4g030090 27.692 325 184 13 26 322 14 315 4.37e-17 82.8
MS.gene041395.t1 MTR_5g056020 25.496 353 202 13 14 322 5 340 4.73e-17 83.2
MS.gene041395.t1 MTR_2g026010 27.619 315 193 13 26 326 4 297 4.97e-17 82.4
MS.gene041395.t1 MTR_5g097350 25.773 388 229 16 35 392 25 383 5.00e-17 82.4
MS.gene041395.t1 MTR_2g047878 23.978 367 232 11 16 369 11 343 5.55e-17 82.0
MS.gene041395.t1 MTR_3g096250 33.143 175 102 4 24 194 45 208 8.76e-17 81.3
MS.gene041395.t1 MTR_7g013590 28.080 349 202 15 2 327 3 325 1.16e-16 81.6
MS.gene041395.t1 MTR_3g006530 27.164 335 194 17 20 335 34 337 1.17e-16 81.6
MS.gene041395.t1 MTR_7g050480 27.246 345 185 14 8 322 4 312 1.20e-16 81.3
MS.gene041395.t1 MTR_2g078850 29.073 313 177 14 29 327 33 314 1.29e-16 81.3
MS.gene041395.t1 MTR_6g034830 41.538 130 60 3 11 140 5 118 1.52e-16 75.9
MS.gene041395.t1 MTR_7g062060 25.879 398 236 18 15 368 1 383 1.56e-16 81.3
MS.gene041395.t1 MTR_3g023940 27.523 327 177 17 24 327 32 321 1.57e-16 80.9
MS.gene041395.t1 MTR_5g009060 28.024 339 181 16 24 322 23 338 1.78e-16 80.9
MS.gene041395.t1 MTR_2g025960 24.901 253 160 7 120 352 1 243 1.82e-16 80.1
MS.gene041395.t1 MTR_3g009260 28.205 312 180 15 22 322 36 314 1.86e-16 80.9
MS.gene041395.t1 MTR_7g055977 25.954 393 208 15 25 370 6 362 2.17e-16 80.5
MS.gene041395.t1 MTR_2g031640 28.115 313 190 15 26 326 6 295 2.21e-16 80.5
MS.gene041395.t1 MTR_1g088120 26.377 345 190 13 20 324 3 323 3.02e-16 80.5
MS.gene041395.t1 MTR_5g057643 32.016 253 126 11 26 262 46 268 3.10e-16 78.6
MS.gene041395.t1 MTR_2g021210 27.160 324 192 16 16 330 76 364 3.64e-16 80.1
MS.gene041395.t1 MTR_2g066170 25.429 350 213 13 25 347 11 339 4.65e-16 79.7
MS.gene041395.t1 MTR_5g096630 23.832 428 238 17 26 396 18 414 4.81e-16 79.7
MS.gene041395.t1 MTR_5g057040 27.925 265 144 10 26 273 46 280 5.27e-16 80.5
MS.gene041395.t1 MTR_0464s0020 29.344 259 118 11 29 249 26 257 5.45e-16 79.7
MS.gene041395.t1 MTR_2g024100 25.613 367 222 15 33 374 14 354 5.55e-16 79.3
MS.gene041395.t1 MTR_7g050520 27.246 345 185 14 8 322 4 312 6.28e-16 79.3
MS.gene041395.t1 MTR_7g077970 28.161 348 197 16 24 335 5 335 7.34e-16 79.3
MS.gene041395.t1 MTR_0242s0060 28.182 330 192 14 25 324 8 322 1.00e-15 79.0
MS.gene041395.t1 MTR_0242s0040 28.182 330 192 14 25 324 8 322 1.00e-15 79.0
MS.gene041395.t1 MTR_2g066200 27.401 354 203 18 25 347 11 341 1.19e-15 78.2
MS.gene041395.t1 MTR_5g046300 25.000 312 187 14 24 322 2 279 1.31e-15 77.8
MS.gene041395.t1 MTR_5g046290 25.000 312 187 14 24 322 2 279 1.31e-15 77.8
MS.gene041395.t1 MTR_0129s0070 25.373 402 243 16 29 398 20 396 1.49e-15 78.2
MS.gene041395.t1 MTR_5g008530 70.690 58 14 2 26 83 18 72 1.52e-15 71.2
MS.gene041395.t1 MTR_7g066100 25.245 408 244 19 25 393 10 395 1.70e-15 77.8
MS.gene041395.t1 MTR_0267s0050 25.946 370 227 14 29 367 9 362 1.81e-15 77.8
MS.gene041395.t1 MTR_3g024040 26.837 313 192 12 33 339 38 319 2.05e-15 77.4
MS.gene041395.t1 MTR_4g013180 25.904 332 188 12 25 324 10 315 2.16e-15 78.2
MS.gene041395.t1 MTR_1g442850 25.962 312 195 10 29 322 8 301 2.54e-15 77.4
MS.gene041395.t1 MTR_0054s0100 24.750 400 258 15 25 392 16 404 3.38e-15 77.0
MS.gene041395.t1 MTR_7g066010 24.272 412 207 18 25 392 20 370 3.44e-15 76.6
MS.gene041395.t1 MTR_3g058470 26.801 347 178 17 24 348 35 327 3.51e-15 76.6
MS.gene041395.t1 MTR_7g056200 26.121 379 196 15 13 353 10 342 3.67e-15 77.0
MS.gene041395.t1 MTR_7g061050 27.976 336 194 13 23 335 10 320 4.23e-15 76.6
MS.gene041395.t1 MTR_7g057270 27.523 327 193 13 26 324 26 336 4.48e-15 76.6
MS.gene041395.t1 MTR_8g063440 23.626 364 230 13 25 358 11 356 4.87e-15 76.6
MS.gene041395.t1 MTR_7g056170 26.366 421 221 21 25 391 74 459 6.19e-15 76.6
MS.gene041395.t1 MTR_2g047892 27.429 350 182 17 11 322 6 321 6.54e-15 76.3
MS.gene041395.t1 MTR_3g464500 23.907 389 221 16 1 346 1 357 7.58e-15 75.9
MS.gene041395.t1 MTR_7g035295 25.653 421 201 18 26 391 16 379 7.82e-15 75.9
MS.gene041395.t1 MTR_4g028680 26.016 369 213 15 17 347 7 353 1.01e-14 75.5
MS.gene041395.t1 MTR_6g055210 26.124 356 203 16 9 329 5 335 1.34e-14 75.5
MS.gene041395.t1 MTR_3g437520 27.413 259 123 9 29 249 26 257 1.34e-14 75.5
MS.gene041395.t1 MTR_4g030760 25.691 362 216 15 29 367 76 407 2.19e-14 74.7
MS.gene041395.t1 MTR_2g034700 25.788 349 199 15 25 347 13 327 2.88e-14 73.9
MS.gene041395.t1 MTR_2g043400 26.168 428 215 19 29 391 26 417 3.29e-14 74.3
MS.gene041395.t1 MTR_7g066000 26.020 392 234 19 12 367 8 379 3.84e-14 73.9
MS.gene041395.t1 MTR_7g078840 24.561 342 207 11 25 324 9 341 4.04e-14 73.9
MS.gene041395.t1 MTR_2g461450 25.868 317 198 11 26 335 18 304 4.38e-14 73.6
MS.gene041395.t1 MTR_3g464470 24.217 351 192 14 25 343 6 314 4.48e-14 73.6
MS.gene041395.t1 MTR_6g016285 25.330 454 211 24 19 391 11 417 4.79e-14 73.9
MS.gene041395.t1 MTR_3g013950 25.067 375 226 15 29 367 9 364 4.93e-14 73.6
MS.gene041395.t1 MTR_3g058480 29.091 220 116 9 24 222 37 237 4.95e-14 73.2
MS.gene041395.t1 MTR_4g117550 26.980 404 209 19 25 392 16 369 5.72e-14 73.2
MS.gene041395.t1 MTR_2g031700 28.279 244 148 10 26 265 6 226 6.52e-14 72.0
MS.gene041395.t1 MTR_7g055830 25.369 406 195 16 29 391 16 356 6.93e-14 72.8
MS.gene041395.t1 MTR_0707s0020 25.055 451 226 18 25 393 25 445 7.33e-14 73.2
MS.gene041395.t1 MTR_5g092850 26.203 374 216 17 25 360 15 366 1.09e-13 72.4
MS.gene041395.t1 MTR_1g055200 52.055 73 21 3 124 195 6 65 1.10e-13 67.4
MS.gene041395.t1 MTR_6g017280 27.513 378 203 20 26 360 9 358 1.15e-13 72.4
MS.gene041395.t1 MTR_1g007450 25.073 343 207 13 26 332 12 340 1.47e-13 72.0
MS.gene041395.t1 MTR_5g023570 41.463 123 64 4 20 141 31 146 1.80e-13 67.8
MS.gene041395.t1 MTR_3g009250 30.342 234 131 10 22 249 36 243 1.87e-13 70.1
MS.gene041395.t1 MTR_5g046260 23.226 310 165 13 24 322 2 249 2.01e-13 70.9
MS.gene041395.t1 MTR_2g047200 25.776 419 215 23 10 372 3 381 2.11e-13 71.6
MS.gene041395.t1 MTR_7g056797 27.875 287 175 13 9 273 4 280 2.14e-13 71.6
MS.gene041395.t1 MTR_7g077990 27.219 338 183 16 16 322 7 312 2.15e-13 71.6
MS.gene041395.t1 MTR_1g055145 62.500 56 20 1 28 83 35 89 2.23e-13 70.5
MS.gene041395.t1 MTR_1g055145 48.684 76 35 3 239 313 130 202 3.30e-11 63.9
MS.gene041395.t1 MTR_7g069550 25.743 404 223 18 10 367 1 373 2.24e-13 71.6
MS.gene041395.t1 MTR_8g066440 25.381 394 247 18 9 370 6 384 2.53e-13 71.2
MS.gene041395.t1 MTR_3g010870 27.119 236 132 9 22 247 33 238 2.92e-13 70.5
MS.gene041395.t1 MTR_3g010440 34.899 149 87 6 22 166 22 164 2.93e-13 70.9
MS.gene041395.t1 MTR_8g467670 23.457 324 196 12 25 322 13 310 3.15e-13 70.9
MS.gene041395.t1 MTR_1g007410 26.286 350 195 15 25 332 21 349 3.60e-13 70.9
MS.gene041395.t1 MTR_7g060960 29.393 313 159 15 26 324 32 296 3.89e-13 70.5
MS.gene041395.t1 MTR_6g048120 26.888 331 190 16 20 327 30 331 4.32e-13 70.9
MS.gene041395.t1 MTR_6g080680 25.135 370 239 13 25 371 18 372 4.74e-13 70.5
MS.gene041395.t1 MTR_3g011650 29.915 234 133 9 22 249 74 282 4.95e-13 69.3
MS.gene041395.t1 MTR_2g064950 25.000 376 224 13 29 369 13 365 1.06e-12 69.3
MS.gene041395.t1 MTR_7g061090 25.706 354 183 17 17 322 10 331 1.16e-12 69.3
MS.gene041395.t1 MTR_1g037540 24.694 409 246 18 29 392 8 399 1.63e-12 68.9
MS.gene041395.t1 MTR_3g058440 26.531 245 134 9 26 250 35 253 1.71e-12 68.2
MS.gene041395.t1 MTR_5g043160 25.823 395 214 17 29 365 53 426 1.86e-12 68.9
MS.gene041395.t1 MTR_7g066840 25.824 364 208 15 18 346 15 351 1.87e-12 68.6
MS.gene041395.t1 MTR_7g022600 25.627 359 207 15 6 322 2 342 2.09e-12 68.6
MS.gene041395.t1 MTR_7g060940 27.463 335 172 17 26 324 22 321 2.21e-12 68.6
MS.gene041395.t1 MTR_6g461660 25.989 354 208 17 25 344 18 351 2.34e-12 68.6
MS.gene041395.t1 MTR_4g030110 24.586 362 204 15 1 335 8 327 2.43e-12 68.2
MS.gene041395.t1 MTR_6g048140 25.826 333 177 16 24 327 37 328 2.72e-12 68.2
MS.gene041395.t1 MTR_6g086920 25.201 373 176 15 25 322 37 381 2.78e-12 68.6
MS.gene041395.t1 MTR_2g006360 26.846 298 157 12 29 324 49 287 3.19e-12 67.8
MS.gene041395.t1 MTR_4g011660 22.917 432 261 15 14 391 4 417 3.51e-12 67.8
MS.gene041395.t1 MTR_3g080370 24.434 442 239 20 15 391 6 417 3.70e-12 68.2
MS.gene041395.t1 MTR_6g014720 23.426 397 237 16 20 391 20 374 3.75e-12 67.8
MS.gene041395.t1 MTR_8g012090 25.672 335 188 14 34 347 24 318 3.97e-12 67.4
MS.gene041395.t1 MTR_7g056570 26.036 338 182 13 16 322 8 308 4.02e-12 67.8
MS.gene041395.t1 MTR_6g042600 32.828 198 88 8 10 199 20 180 4.48e-12 67.4
MS.gene041395.t1 MTR_7g052150 24.781 343 200 13 9 324 6 317 4.96e-12 67.4
MS.gene041395.t1 MTR_5g068040 25.545 321 176 13 29 324 19 301 5.31e-12 67.4
MS.gene041395.t1 MTR_2g040050 24.151 265 158 10 86 340 9 240 5.45e-12 65.9
MS.gene041395.t1 MTR_4g023100 56.897 58 21 1 341 398 65 118 5.66e-12 62.8
MS.gene041395.t1 MTR_0129s0120 24.294 354 225 13 34 360 25 362 6.64e-12 67.0
MS.gene041395.t1 MTR_7g037670 26.336 262 158 9 12 265 7 241 7.07e-12 66.6
MS.gene041395.t1 MTR_5g072060 26.984 378 204 17 25 367 5 345 7.48e-12 67.4
MS.gene041395.t1 MTR_7g052670 26.000 400 208 19 25 360 20 395 7.86e-12 67.0
MS.gene041395.t1 MTR_4g080200 28.155 309 173 16 29 322 6 280 8.51e-12 66.2
MS.gene041395.t1 MTR_5g097220 23.971 413 241 14 29 392 16 404 9.40e-12 66.6
MS.gene041395.t1 MTR_7g056737 26.061 330 181 14 22 322 17 312 9.86e-12 66.6
MS.gene041395.t1 MTR_7g078040 26.686 341 194 15 26 324 9 335 1.04e-11 66.6
MS.gene041395.t1 MTR_1g071010 23.220 323 207 12 24 324 13 316 1.08e-11 66.2
MS.gene041395.t1 MTR_4g024870 26.423 246 156 8 14 250 32 261 1.09e-11 66.6
MS.gene041395.t1 MTR_6g079810 24.060 399 220 20 11 347 39 416 1.14e-11 66.6
MS.gene041395.t1 MTR_4g013185 25.208 361 186 14 20 324 3 335 1.35e-11 66.2
MS.gene041395.t1 MTR_4g055820 23.846 390 211 20 10 347 1 356 1.42e-11 65.9
MS.gene041395.t1 MTR_4g007940 25.347 288 158 14 110 367 55 315 2.15e-11 65.1
MS.gene041395.t1 MTR_5g097680 23.848 369 195 13 25 326 16 365 2.27e-11 65.5
MS.gene041395.t1 MTR_4g008790 26.764 411 194 20 20 360 32 405 2.46e-11 65.5
MS.gene041395.t1 MTR_5g094350 25.000 272 167 10 25 273 12 269 2.76e-11 64.3
MS.gene041395.t1 MTR_4g019990 24.000 350 202 14 25 339 5 325 3.24e-11 64.7
MS.gene041395.t1 MTR_7g445750 26.061 330 185 17 25 316 22 330 3.30e-11 64.3
MS.gene041395.t1 MTR_7g050490 28.704 216 109 7 20 219 2 188 4.45e-11 62.0
MS.gene041395.t1 MTR_7g077070 24.773 331 206 13 26 322 16 337 5.13e-11 64.3
MS.gene041395.t1 MTR_5g096910 24.439 401 243 17 25 392 16 389 5.59e-11 64.3
MS.gene041395.t1 MTR_5g068490 23.554 242 157 9 118 357 25 240 5.74e-11 63.2
MS.gene041395.t1 MTR_1004s0010 27.778 270 130 12 79 327 68 293 6.23e-11 63.9
MS.gene041395.t1 MTR_2g104260 25.000 312 149 12 7 270 2 276 6.91e-11 62.8
MS.gene041395.t1 MTR_3g095610 32.000 125 76 3 25 147 34 151 9.30e-11 60.5
MS.gene041395.t1 MTR_0649s0020 30.882 204 110 10 26 220 11 192 9.59e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041395.t1 AT3G06240 28.276 435 241 16 1 391 12 419 5.57e-31 123
MS.gene041395.t1 AT3G23880 29.360 344 208 14 26 360 14 331 5.50e-27 110
MS.gene041395.t1 AT4G12560 27.193 342 202 15 26 343 4 322 6.59e-24 102
MS.gene041395.t1 AT4G12560 27.193 342 202 15 26 343 4 322 6.59e-24 102
MS.gene041395.t1 AT4G12560 27.193 342 202 15 26 343 4 322 6.59e-24 102
MS.gene041395.t1 AT4G22390 26.720 378 202 19 27 374 5 337 6.91e-20 91.3
MS.gene041395.t1 AT4G22390 26.720 378 202 19 27 374 5 337 8.10e-20 90.9
MS.gene041395.t1 AT3G16210 24.370 357 212 13 25 369 4 314 3.21e-18 85.9
MS.gene041395.t1 AT2G02030 25.723 311 192 13 3 287 20 317 1.30e-13 71.6
MS.gene041395.t1 AT1G32420 24.691 324 180 13 8 313 19 296 3.35e-13 70.1
MS.gene041395.t1 AT3G16590 23.786 412 226 20 26 393 5 372 2.90e-12 68.2
MS.gene041395.t1 AT1G47790 23.948 309 193 15 19 317 18 294 8.15e-12 66.6
MS.gene041395.t1 AT1G12870 22.857 385 243 19 12 369 19 376 2.43e-11 65.5
MS.gene041395.t1 AT3G10430 27.049 244 150 10 26 266 5 223 2.71e-11 65.1

Find 74 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGTGATTTGTGGGTATT+TGG 0.200105 8.2:+12704294 MS.gene041395:CDS
ACGACACACACTCGTAAAAT+TGG 0.251398 8.2:+12703454 MS.gene041395:CDS
TTGGAGAATTTCTTAGTCTA+TGG 0.253813 8.2:+12704313 MS.gene041395:CDS
AGTCTATGGGCCATGGATTA+TGG 0.284247 8.2:+12704327 MS.gene041395:CDS
GCTCTTGTTCTTCCTATTGA+TGG 0.292843 8.2:+12704411 MS.gene041395:CDS
TATTCTTGCATTTGATTTAA+CGG 0.295724 8.2:+12704218 MS.gene041395:CDS
ACACTCGTAAAATTGGAAAA+AGG 0.339804 8.2:+12703461 MS.gene041395:CDS
GTAATCGTGGAGTTGAAATA+TGG 0.340005 8.2:+12704349 MS.gene041395:CDS
TGGTTCGATCAACTTGAAAC+TGG 0.341682 8.2:+12704558 MS.gene041395:CDS
ATTAACTAAGGTTGGATCAT+AGG 0.369534 8.2:-12704022 None:intergenic
TTCTGGAGCATGAATCATAT+TGG 0.379314 8.2:+12704538 MS.gene041395:CDS
TCATCATGGGTTTCCATGTA+AGG 0.381919 8.2:-12704123 None:intergenic
GTCTTTCAATAACAGTAGTA+TGG 0.383519 8.2:-12703741 None:intergenic
TAACGACGAAGGACAGCTTC+TGG 0.400729 8.2:+12704521 MS.gene041395:CDS
CCCTACTTTGGGTTCATCAT+GGG 0.405298 8.2:-12704136 None:intergenic
TAGGCTTGCACATTGCCATC+AGG 0.409922 8.2:-12704621 None:intergenic
TAATGGGGTTATTCATTGGT+TGG 0.419885 8.2:+12704167 MS.gene041395:CDS
AATTGAAAATTGTGATTTGT+GGG 0.432633 8.2:+12704287 MS.gene041395:CDS
TTAAATGCGTTTGTAAGCCT+TGG 0.435299 8.2:+12703581 MS.gene041395:CDS
ACCCTACTTTGGGTTCATCA+TGG 0.441027 8.2:-12704137 None:intergenic
TCTCATTAAGAGATAATACT+TGG 0.441269 8.2:+12704070 MS.gene041395:CDS
GAGATTTATAAAACTAGGGT+TGG 0.442438 8.2:-12703764 None:intergenic
AGAGAGGGAGTGCCATCAAT+AGG 0.445032 8.2:-12704423 None:intergenic
GATAAGAGATTTATAAAACT+AGG 0.451755 8.2:-12703769 None:intergenic
ATAATTCAAGCTTCTACCTA+TGG 0.456394 8.2:+12703848 MS.gene041395:CDS
AAAACGAATAAGAGACTTCA+CGG 0.464260 8.2:-12703560 None:intergenic
GGGTACTCGCTTCCCTTACA+TGG 0.472810 8.2:+12704110 MS.gene041395:CDS
TAACAACAATTAACTAAGGT+TGG 0.474023 8.2:-12704030 None:intergenic
TGGAGAATTTCTTAGTCTAT+GGG 0.478962 8.2:+12704314 MS.gene041395:CDS
GGTGATATTGTTGCAACAAA+TGG 0.484165 8.2:+12704477 MS.gene041395:CDS
ATCAATTCAAGAGGCAGATA+AGG 0.485629 8.2:-12703514 None:intergenic
AAATTGAAAATTGTGATTTG+TGG 0.486679 8.2:+12704286 MS.gene041395:CDS
ATTTCTTAGTCTATGGGCCA+TGG 0.489177 8.2:+12704320 MS.gene041395:CDS
TAATTGTTGTTATTCGCGAT+TGG 0.491887 8.2:+12704041 MS.gene041395:CDS
TTTATAAATCTCTTATCTGA+TGG 0.493690 8.2:+12703775 MS.gene041395:CDS
AATACAAAGTGCATTCGTCT+TGG 0.494278 8.2:+12704382 MS.gene041395:CDS
AGATTTATAAAACTAGGGTT+GGG 0.504769 8.2:-12703763 None:intergenic
AAGGTATTTGTTTATGAACT+CGG 0.509086 8.2:-12703882 None:intergenic
TGGCCAAAACCATCTAGAAA+AGG 0.510473 8.2:-12704261 None:intergenic
TTGGAAAGAACTAGAGGTAG+AGG 0.513421 8.2:+12704089 MS.gene041395:CDS
AGGTATTTGTTTATGAACTC+GGG 0.518402 8.2:-12703881 None:intergenic
TCAGTTAAAAGATGATTACT+TGG 0.519711 8.2:+12703987 MS.gene041395:CDS
CCCATGATGAACCCAAAGTA+GGG 0.521547 8.2:+12704136 MS.gene041395:CDS
GTTAAAAGATGATTACTTGG+TGG 0.525764 8.2:+12703990 MS.gene041395:CDS
CGAATAACAACAATTAACTA+AGG 0.526514 8.2:-12704034 None:intergenic
TGTTTATGAACTCGGGTGGA+TGG 0.531260 8.2:-12703874 None:intergenic
ATAAGAGATTTATAAAACTA+GGG 0.538321 8.2:-12703768 None:intergenic
AGGCTTGCACATTGCCATCA+GGG 0.547880 8.2:-12704620 None:intergenic
GAAATTGTAAGTTCCTGTAG+AGG 0.552705 8.2:+12703805 MS.gene041395:CDS
AGTTCAAATTCTGCTGAGGT+TGG 0.553370 8.2:+12703537 MS.gene041395:CDS
TTGCATTTGATTTAACGGAA+AGG 0.556026 8.2:+12704223 MS.gene041395:CDS
TCAAGAGGCAGATAAGGTTG+TGG 0.557034 8.2:-12703508 None:intergenic
CATCATGGGTTTCCATGTAA+GGG 0.569113 8.2:-12704122 None:intergenic
ATTTGAACTATCAATTCAAG+AGG 0.571814 8.2:-12703523 None:intergenic
AAGTAGAGATTCTGTATACA+TGG 0.579816 8.2:-12704592 None:intergenic
ACCCATGATGAACCCAAAGT+AGG 0.584216 8.2:+12704135 MS.gene041395:CDS
ATTCTGTATACATGGTCACT+TGG 0.592328 8.2:-12704584 None:intergenic
TGATAGTTCAAATTCTGCTG+AGG 0.593840 8.2:+12703533 MS.gene041395:CDS
TTTACTAGTGTGTGTTGAGG+CGG 0.597637 8.2:-12703656 None:intergenic
TAATCGTGGAGTTGAAATAT+GGG 0.601352 8.2:+12704350 MS.gene041395:CDS
TCCACGATTACCATAATCCA+TGG 0.601807 8.2:-12704337 None:intergenic
TATTTGTTTATGAACTCGGG+TGG 0.606236 8.2:-12703878 None:intergenic
TCTCTACTTTCTCTCCCTGA+TGG 0.610585 8.2:+12704606 MS.gene041395:CDS
TTTAATTCACGAGGAGACAA+AGG 0.611943 8.2:-12703901 None:intergenic
ATTGGTTTAAAGTACAGAGA+GGG 0.624186 8.2:-12704438 None:intergenic
GCCATGGATTATGGTAATCG+TGG 0.629995 8.2:+12704336 MS.gene041395:CDS
TGGAAAGAACTAGAGGTAGA+GGG 0.641205 8.2:+12704090 MS.gene041395:CDS
AAATGCGAATTTGCAAAGTG+AGG 0.641941 8.2:-12703625 None:intergenic
CTCGGGTGGATGGATTCCAT+AGG 0.645443 8.2:-12703864 None:intergenic
TAATACTTGGAAAGAACTAG+AGG 0.646688 8.2:+12704083 MS.gene041395:CDS
TATTGGTTTAAAGTACAGAG+AGG 0.672126 8.2:-12704439 None:intergenic
GCATCTACATTTAATTCACG+AGG 0.681035 8.2:-12703910 None:intergenic
TTGTTGAAGTATAACGACGA+AGG 0.701432 8.2:+12704510 MS.gene041395:CDS
TTAGAGATAAGAGAAAACCA+AGG 0.720239 8.2:-12703598 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGAGATTTATAAAACTA+GGG - chr8.2:12703771-12703790 None:intergenic 15.0%
!!! AATCACAATTTTCAATTTTA+TGG - chr8.2:12704284-12704303 None:intergenic 15.0%
!! AAATTGAAAATTGTGATTTG+TGG + chr8.2:12704286-12704305 MS.gene041395:CDS 20.0%
!! GATAAGAGATTTATAAAACT+AGG - chr8.2:12703772-12703791 None:intergenic 20.0%
!! TTTATAAATCTCTTATCTGA+TGG + chr8.2:12703775-12703794 MS.gene041395:CDS 20.0%
!!! AATTGAAAATTGTGATTTGT+GGG + chr8.2:12704287-12704306 MS.gene041395:CDS 20.0%
!!! TATGATTGCTTTTATCTATA+TGG + chr8.2:12703952-12703971 MS.gene041395:CDS 20.0%
!!! TATTCTTGCATTTGATTTAA+CGG + chr8.2:12704218-12704237 MS.gene041395:CDS 20.0%
! AGATTTATAAAACTAGGGTT+GGG - chr8.2:12703766-12703785 None:intergenic 25.0%
! ATTTGAACTATCAATTCAAG+AGG - chr8.2:12703526-12703545 None:intergenic 25.0%
! CGAATAACAACAATTAACTA+AGG - chr8.2:12704037-12704056 None:intergenic 25.0%
! TAACAACAATTAACTAAGGT+TGG - chr8.2:12704033-12704052 None:intergenic 25.0%
! TCAGTTAAAAGATGATTACT+TGG + chr8.2:12703987-12704006 MS.gene041395:CDS 25.0%
! TCTCATTAAGAGATAATACT+TGG + chr8.2:12704070-12704089 MS.gene041395:CDS 25.0%
!! AAGGTATTTGTTTATGAACT+CGG - chr8.2:12703885-12703904 None:intergenic 25.0%
!! GCTTTTATCTATATGGTTTT+GGG + chr8.2:12703959-12703978 MS.gene041395:CDS 25.0%
!! TGCTTTTATCTATATGGTTT+TGG + chr8.2:12703958-12703977 MS.gene041395:CDS 25.0%
!! TTTTTAATGGGGTTATTCAT+TGG + chr8.2:12704163-12704182 MS.gene041395:CDS 25.0%
AAAACGAATAAGAGACTTCA+CGG - chr8.2:12703563-12703582 None:intergenic 30.0%
AAGTAGAGATTCTGTATACA+TGG - chr8.2:12704595-12704614 None:intergenic 30.0%
ACACTCGTAAAATTGGAAAA+AGG + chr8.2:12703461-12703480 MS.gene041395:CDS 30.0%
AGGTATTTGTTTATGAACTC+GGG - chr8.2:12703884-12703903 None:intergenic 30.0%
ATAATTCAAGCTTCTACCTA+TGG + chr8.2:12703848-12703867 MS.gene041395:CDS 30.0%
ATTAAAAAGTGACCCTACTT+TGG - chr8.2:12704151-12704170 None:intergenic 30.0%
ATTAACTAAGGTTGGATCAT+AGG - chr8.2:12704025-12704044 None:intergenic 30.0%
GAGATTTATAAAACTAGGGT+TGG - chr8.2:12703767-12703786 None:intergenic 30.0%
GTCTTTCAATAACAGTAGTA+TGG - chr8.2:12703744-12703763 None:intergenic 30.0%
GTTAAAAGATGATTACTTGG+TGG + chr8.2:12703990-12704009 MS.gene041395:CDS 30.0%
TAATACTTGGAAAGAACTAG+AGG + chr8.2:12704083-12704102 MS.gene041395:CDS 30.0%
TAATCGTGGAGTTGAAATAT+GGG + chr8.2:12704350-12704369 MS.gene041395:CDS 30.0%
TGGAGAATTTCTTAGTCTAT+GGG + chr8.2:12704314-12704333 MS.gene041395:CDS 30.0%
TTAAAAAGTGACCCTACTTT+GGG - chr8.2:12704150-12704169 None:intergenic 30.0%
TTAGAGATAAGAGAAAACCA+AGG - chr8.2:12703601-12703620 None:intergenic 30.0%
TTGGAGAATTTCTTAGTCTA+TGG + chr8.2:12704313-12704332 MS.gene041395:CDS 30.0%
! AATTGTGATTTGTGGGTATT+TGG + chr8.2:12704294-12704313 MS.gene041395:CDS 30.0%
! AATTTTACTAGTGTGTGTTG+AGG - chr8.2:12703662-12703681 None:intergenic 30.0%
! ATTGGTTTAAAGTACAGAGA+GGG - chr8.2:12704441-12704460 None:intergenic 30.0%
! TAATTGTTGTTATTCGCGAT+TGG + chr8.2:12704041-12704060 MS.gene041395:CDS 30.0%
! TTGCATTTGATTTAACGGAA+AGG + chr8.2:12704223-12704242 MS.gene041395:CDS 30.0%
!! TATTGGTTTAAAGTACAGAG+AGG - chr8.2:12704442-12704461 None:intergenic 30.0%
!!! AAAGTAGGGTCACTTTTTAA+TGG + chr8.2:12704150-12704169 MS.gene041395:CDS 30.0%
!!! AAGTAGGGTCACTTTTTAAT+GGG + chr8.2:12704151-12704170 MS.gene041395:CDS 30.0%
AAATGCGAATTTGCAAAGTG+AGG - chr8.2:12703628-12703647 None:intergenic 35.0%
AATACAAAGTGCATTCGTCT+TGG + chr8.2:12704382-12704401 MS.gene041395:CDS 35.0%
ATCAATTCAAGAGGCAGATA+AGG - chr8.2:12703517-12703536 None:intergenic 35.0%
ATTCTGTATACATGGTCACT+TGG - chr8.2:12704587-12704606 None:intergenic 35.0%
CAAAAACATAAAGCCTCTAC+AGG - chr8.2:12703821-12703840 None:intergenic 35.0%
CCAATATGCTCTACAAAAAG+TGG + chr8.2:12704456-12704475 MS.gene041395:CDS 35.0%
GAAATTGTAAGTTCCTGTAG+AGG + chr8.2:12703805-12703824 MS.gene041395:CDS 35.0%
GCATCTACATTTAATTCACG+AGG - chr8.2:12703913-12703932 None:intergenic 35.0%
GGTGATATTGTTGCAACAAA+TGG + chr8.2:12704477-12704496 MS.gene041395:CDS 35.0%
GTAATCGTGGAGTTGAAATA+TGG + chr8.2:12704349-12704368 MS.gene041395:CDS 35.0%
GTTGCAACAAATGGCAAAAA+TGG + chr8.2:12704486-12704505 MS.gene041395:CDS 35.0%
TAATGGGGTTATTCATTGGT+TGG + chr8.2:12704167-12704186 MS.gene041395:CDS 35.0%
TATTTGTTTATGAACTCGGG+TGG - chr8.2:12703881-12703900 None:intergenic 35.0%
TGATAGTTCAAATTCTGCTG+AGG + chr8.2:12703533-12703552 MS.gene041395:CDS 35.0%
TTAAATGCGTTTGTAAGCCT+TGG + chr8.2:12703581-12703600 MS.gene041395:CDS 35.0%
TTGTTGAAGTATAACGACGA+AGG + chr8.2:12704510-12704529 MS.gene041395:CDS 35.0%
TTTAATTCACGAGGAGACAA+AGG - chr8.2:12703904-12703923 None:intergenic 35.0%
! ATGCCTTTTCTAGATGGTTT+TGG + chr8.2:12704258-12704277 MS.gene041395:CDS 35.0%
! TTAGAGATGCCTTTTCTAGA+TGG + chr8.2:12704252-12704271 MS.gene041395:CDS 35.0%
!! TTCTGGAGCATGAATCATAT+TGG + chr8.2:12704538-12704557 MS.gene041395:CDS 35.0%
!!! AGTAGGGTCACTTTTTAATG+GGG + chr8.2:12704152-12704171 MS.gene041395:CDS 35.0%
!!! CCACTTTTTGTAGAGCATAT+TGG - chr8.2:12704459-12704478 None:intergenic 35.0%
ACGACACACACTCGTAAAAT+TGG + chr8.2:12703454-12703473 MS.gene041395:CDS 40.0%
AGTTCAAATTCTGCTGAGGT+TGG + chr8.2:12703537-12703556 MS.gene041395:CDS 40.0%
ATTTCTTAGTCTATGGGCCA+TGG + chr8.2:12704320-12704339 MS.gene041395:CDS 40.0%
CATCATGGGTTTCCATGTAA+GGG - chr8.2:12704125-12704144 None:intergenic 40.0%
GCTCTTGTTCTTCCTATTGA+TGG + chr8.2:12704411-12704430 MS.gene041395:CDS 40.0%
TCATCATGGGTTTCCATGTA+AGG - chr8.2:12704126-12704145 None:intergenic 40.0%
TCCACGATTACCATAATCCA+TGG - chr8.2:12704340-12704359 None:intergenic 40.0%
TGGAAAGAACTAGAGGTAGA+GGG + chr8.2:12704090-12704109 MS.gene041395:CDS 40.0%
TGGCCAAAACCATCTAGAAA+AGG - chr8.2:12704264-12704283 None:intergenic 40.0%
TGGTTCGATCAACTTGAAAC+TGG + chr8.2:12704558-12704577 MS.gene041395:CDS 40.0%
TTGGAAAGAACTAGAGGTAG+AGG + chr8.2:12704089-12704108 MS.gene041395:CDS 40.0%
TTTACTAGTGTGTGTTGAGG+CGG - chr8.2:12703659-12703678 None:intergenic 40.0%
ACCCATGATGAACCCAAAGT+AGG + chr8.2:12704135-12704154 MS.gene041395:CDS 45.0%
CCCATGATGAACCCAAAGTA+GGG + chr8.2:12704136-12704155 MS.gene041395:CDS 45.0%
TCAAGAGGCAGATAAGGTTG+TGG - chr8.2:12703511-12703530 None:intergenic 45.0%
TCTCTACTTTCTCTCCCTGA+TGG + chr8.2:12704606-12704625 MS.gene041395:CDS 45.0%
TGTTTATGAACTCGGGTGGA+TGG - chr8.2:12703877-12703896 None:intergenic 45.0%
! ACCCTACTTTGGGTTCATCA+TGG - chr8.2:12704140-12704159 None:intergenic 45.0%
! AGTCTATGGGCCATGGATTA+TGG + chr8.2:12704327-12704346 MS.gene041395:CDS 45.0%
! CCCTACTTTGGGTTCATCAT+GGG - chr8.2:12704139-12704158 None:intergenic 45.0%
! GCCATGGATTATGGTAATCG+TGG + chr8.2:12704336-12704355 MS.gene041395:CDS 45.0%
AGGCTTGCACATTGCCATCA+GGG - chr8.2:12704623-12704642 None:intergenic 50.0%
TAACGACGAAGGACAGCTTC+TGG + chr8.2:12704521-12704540 MS.gene041395:CDS 50.0%
TAGGCTTGCACATTGCCATC+AGG - chr8.2:12704624-12704643 None:intergenic 50.0%
!! AGAGAGGGAGTGCCATCAAT+AGG - chr8.2:12704426-12704445 None:intergenic 50.0%
GGGTACTCGCTTCCCTTACA+TGG + chr8.2:12704110-12704129 MS.gene041395:CDS 55.0%
! CTCGGGTGGATGGATTCCAT+AGG - chr8.2:12703867-12703886 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 12703445 12704644 12703445 ID=MS.gene041395
chr8.2 mRNA 12703445 12704644 12703445 ID=MS.gene041395.t1;Parent=MS.gene041395
chr8.2 exon 12703445 12704644 12703445 ID=MS.gene041395.t1.exon1;Parent=MS.gene041395.t1
chr8.2 CDS 12703445 12704644 12703445 ID=cds.MS.gene041395.t1;Parent=MS.gene041395.t1
Gene Sequence

>MS.gene041395

ATGGAGGAGACGACACACACTCGTAAAATTGGAAAAAGGCGCATGAAGAAGAAGAAGACGAATCCACAACCTTATCTGCCTCTTGAATTGATAGTTCAAATTCTGCTGAGGTTGGCCGTGAAGTCTCTTATTCGTTTTAAATGCGTTTGTAAGCCTTGGTTTTCTCTTATCTCTAATGATCCTCACTTTGCAAATTCGCATTTTCAAATAACCGCCTCAACACACACTAGTAAAATTGTGTTCATAACAAATTCACTCAGTGACACACTATCTTTCGATTTTGAAGTATCTATTCACCATACTACTGTTATTGAAAGACCCAACCCTAGTTTTATAAATCTCTTATCTGATGGTCTTATTGAAATTGTAAGTTCCTGTAGAGGCTTTATGTTTTTGCATGATCATAATTCAAGCTTCTACCTATGGAATCCATCCACCCGAGTTCATAAACAAATACCTTTGTCTCCTCGTGAATTAAATGTAGATGCTGTAGCTGTTGTAGATGCATATGATTGCTTTTATCTATATGGTTTTGGGTATGATCAGTTAAAAGATGATTACTTGGTGGTTTCAGTGTCCTATGATCCAACCTTAGTTAATTGTTGTTATTCGCGATTGGACTTTTTCTCATTAAGAGATAATACTTGGAAAGAACTAGAGGTAGAGGGTACTCGCTTCCCTTACATGGAAACCCATGATGAACCCAAAGTAGGGTCACTTTTTAATGGGGTTATTCATTGGTTGGCTTTTAATTATGATTTATTGAAGAAAGTTATTCTTGCATTTGATTTAACGGAAAGGAAACTTTTAGAGATGCCTTTTCTAGATGGTTTTGGCCATAAAATTGAAAATTGTGATTTGTGGGTATTTGGAGAATTTCTTAGTCTATGGGCCATGGATTATGGTAATCGTGGAGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCGTCTTGGACTAAAGCTCTTGTTCTTCCTATTGATGGCACTCCCTCTCTGTACTTTAAACCAATATGCTCTACAAAAAGTGGTGATATTGTTGCAACAAATGGCAAAAATGGATTGTTGAAGTATAACGACGAAGGACAGCTTCTGGAGCATGAATCATATTGGTTCGATCAACTTGAAACTGGATTCCAAGTGACCATGTATACAGAATCTCTACTTTCTCTCCCTGATGGCAATGTGCAAGCCTAA

Protein sequence

>MS.gene041395.t1

MEETTHTRKIGKRRMKKKKTNPQPYLPLELIVQILLRLAVKSLIRFKCVCKPWFSLISNDPHFANSHFQITASTHTSKIVFITNSLSDTLSFDFEVSIHHTTVIERPNPSFINLLSDGLIEIVSSCRGFMFLHDHNSSFYLWNPSTRVHKQIPLSPRELNVDAVAVVDAYDCFYLYGFGYDQLKDDYLVVSVSYDPTLVNCCYSRLDFFSLRDNTWKELEVEGTRFPYMETHDEPKVGSLFNGVIHWLAFNYDLLKKVILAFDLTERKLLEMPFLDGFGHKIENCDLWVFGEFLSLWAMDYGNRGVEIWVMKEYKVHSSWTKALVLPIDGTPSLYFKPICSTKSGDIVATNGKNGLLKYNDEGQLLEHESYWFDQLETGFQVTMYTESLLSLPDGNVQA