AlfalfaGEDB | MS.gene058692

M. sativa cultivar XinJiangDaYe / MS.gene058692

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058692.t1	XP_024628923.1	65	217	70	1	1	211	9	225	2.40E-69	271.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058692.t1	G7L7F6	65.0	217	70	1	1	211	106	322	1.8e-69	271.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene058692	MS.gene033083	PPI
MS.gene058692	MS.gene63658	PPI
MS.gene036557	MS.gene058692	PPI
MS.gene058692	MS.gene60027	PPI
MS.gene058692	MS.gene033081	PPI
MS.gene058692	MS.gene036663	PPI
MS.gene058692	MS.gene68580	PPI
MS.gene058692	MS.gene072177	PPI
MS.gene063826	MS.gene058692	PPI
MS.gene058692	MS.gene57525	PPI
MS.gene84698	MS.gene058692	PPI
MS.gene44892	MS.gene058692	PPI
MS.gene058692	MS.gene023996	PPI
MS.gene058692	MS.gene030114	PPI
MS.gene058692	MS.gene58716	PPI
MS.gene058692	MS.gene045473	PPI
MS.gene058692	MS.gene50301	PPI
MS.gene066641	MS.gene058692	PPI
MS.gene058692	MS.gene88774	PPI
MS.gene058692	MS.gene045474	PPI
MS.gene000038	MS.gene058692	PPI
MS.gene058692	MS.gene036558	PPI
MS.gene058692	MS.gene40984	PPI
MS.gene058692	MS.gene066623	PPI
MS.gene058692	MS.gene064108	PPI
MS.gene57535	MS.gene058692	PPI
MS.gene025887	MS.gene058692	PPI
MS.gene058692	MS.gene064090	PPI
MS.gene041470	MS.gene058692	PPI
MS.gene058692	MS.gene24208	PPI
MS.gene058692	MS.gene58317	PPI
MS.gene058692	MS.gene90742	PPI
MS.gene058692	MS.gene24212	PPI
MS.gene058692	MS.gene51191	PPI
MS.gene006710	MS.gene058692	PPI
MS.gene44885	MS.gene058692	PPI
MS.gene058692	MS.gene58240	PPI
MS.gene011679	MS.gene058692	PPI
MS.gene058692	MS.gene96448	PPI
MS.gene058692	MS.gene063472	PPI
MS.gene058692	MS.gene57717	PPI
MS.gene058692	MS.gene034680	PPI
MS.gene058692	MS.gene31587	PPI
MS.gene058692	MS.gene27021	PPI
MS.gene058692	MS.gene51208	PPI
MS.gene058692	MS.gene044563	PPI
MS.gene058692	MS.gene50327	PPI
MS.gene058692	MS.gene066626	PPI
MS.gene058692	MS.gene40982	PPI
MS.gene058692	MS.gene50339	PPI
MS.gene77856	MS.gene058692	PPI
MS.gene058692	MS.gene063474	PPI
MS.gene058692	MS.gene51190	PPI
MS.gene058692	MS.gene58785	PPI
MS.gene058692	MS.gene044426	PPI
MS.gene058692	MS.gene88416	PPI
MS.gene058692	MS.gene034681	PPI
MS.gene058692	MS.gene57532	PPI
MS.gene058692	MS.gene003076	PPI
MS.gene058692	MS.gene009892	PPI
MS.gene57529	MS.gene058692	PPI
MS.gene058692	MS.gene058669	PPI
MS.gene058692	MS.gene066120	PPI
MS.gene80884	MS.gene058692	PPI
MS.gene058692	MS.gene51192	PPI
MS.gene058692	MS.gene033875	PPI
MS.gene058692	MS.gene041489	PPI
MS.gene058692	MS.gene38220	PPI
MS.gene058692	MS.gene40986	PPI
MS.gene40902	MS.gene058692	PPI
MS.gene058692	MS.gene36704	PPI
MS.gene033427	MS.gene058692	PPI
MS.gene058692	MS.gene034688	PPI
MS.gene058692	MS.gene58239	PPI
MS.gene058692	MS.gene24213	PPI
MS.gene058692	MS.gene033440	PPI
MS.gene058692	MS.gene31637	PPI
MS.gene058692	MS.gene024011	PPI
MS.gene041474	MS.gene058692	PPI
MS.gene27020	MS.gene058692	PPI
MS.gene058692	MS.gene034677	PPI
MS.gene066620	MS.gene058692	PPI
MS.gene035236	MS.gene058692	PPI
MS.gene058692	MS.gene055694	PPI
MS.gene058692	MS.gene035238	PPI
MS.gene058692	MS.gene85043	PPI
MS.gene058692	MS.gene064114	PPI
MS.gene058692	MS.gene87584	PPI
MS.gene51208	MS.gene058692	PPI
MS.gene058692	MS.gene87563	PPI
MS.gene011106	MS.gene058692	PPI
MS.gene058692	MS.gene062698	PPI
MS.gene62398	MS.gene058692	PPI
MS.gene60027	MS.gene058692	PPI
MS.gene058692	MS.gene80610	PPI
MS.gene35068	MS.gene058692	PPI
MS.gene041390	MS.gene058692	PPI
MS.gene058692	MS.gene90743	PPI
MS.gene90744	MS.gene058692	PPI
MS.gene058692	MS.gene053256	PPI
MS.gene51204	MS.gene058692	PPI
MS.gene000035	MS.gene058692	PPI
MS.gene50329	MS.gene058692	PPI
MS.gene058692	MS.gene40886	PPI
MS.gene058692	MS.gene85454	PPI
MS.gene87573	MS.gene058692	PPI
MS.gene058692	MS.gene041391	PPI
MS.gene019504	MS.gene058692	PPI
MS.gene058692	MS.gene033443	PPI
MS.gene059156	MS.gene058692	PPI
MS.gene058692	MS.gene036583	PPI
MS.gene058692	MS.gene006711	PPI
MS.gene058692	MS.gene57536	PPI
MS.gene058692	MS.gene50307	PPI
MS.gene058692	MS.gene51200	PPI
MS.gene058692	MS.gene021553	PPI
MS.gene82082	MS.gene058692	PPI
MS.gene058692	MS.gene44887	PPI
MS.gene058692	MS.gene058701	PPI
MS.gene058692	MS.gene87554	PPI
MS.gene058692	MS.gene009891	PPI
MS.gene058692	MS.gene064083	PPI
MS.gene058692	MS.gene27051	PPI
MS.gene058692	MS.gene048193	PPI
MS.gene058692	MS.gene58312	PPI
MS.gene058692	MS.gene024420	PPI
MS.gene058692	MS.gene016220	PPI
MS.gene058692	MS.gene57533	PPI
MS.gene058692	MS.gene024008	PPI
MS.gene058692	MS.gene50337	PPI
MS.gene058692	MS.gene063670	PPI
MS.gene58311	MS.gene058692	PPI
MS.gene058692	MS.gene54541	PPI
MS.gene058692	MS.gene39265	PPI
MS.gene058692	MS.gene50306	PPI
MS.gene058692	MS.gene041393	PPI
MS.gene058692	MS.gene060368	PPI
MS.gene033432	MS.gene058692	PPI
MS.gene058692	MS.gene053299	PPI
MS.gene058692	MS.gene28758	PPI
MS.gene058692	MS.gene044429	PPI
MS.gene058692	MS.gene57531	PPI
MS.gene59639	MS.gene058692	PPI
MS.gene058692	MS.gene50304	PPI
MS.gene058692	MS.gene27284	PPI
MS.gene058692	MS.gene041388	PPI
MS.gene058692	MS.gene019503	PPI
MS.gene058692	MS.gene48221	PPI
MS.gene010758	MS.gene058692	PPI
MS.gene87586	MS.gene058692	PPI
MS.gene50326	MS.gene058692	PPI
MS.gene058692	MS.gene58319	PPI
MS.gene058692	MS.gene034762	PPI
MS.gene058692	MS.gene71159	PPI
MS.gene058692	MS.gene59943	PPI
MS.gene058692	MS.gene033441	PPI
MS.gene058692	MS.gene033442	PPI
MS.gene058692	MS.gene060366	PPI
MS.gene42452	MS.gene058692	PPI
MS.gene058692	MS.gene44428	PPI
MS.gene058692	MS.gene96407	PPI
MS.gene063414	MS.gene058692	PPI
MS.gene058692	MS.gene058694	PPI
MS.gene058692	MS.gene035235	PPI
MS.gene058692	MS.gene058703	PPI
MS.gene058692	MS.gene50329	PPI
MS.gene058692	MS.gene57528	PPI
MS.gene058692	MS.gene024000	PPI
MS.gene058692	MS.gene012215	PPI
MS.gene051820	MS.gene058692	PPI
MS.gene26957	MS.gene058692	PPI
MS.gene058692	MS.gene033079	PPI
MS.gene036582	MS.gene058692	PPI
MS.gene58320	MS.gene058692	PPI
MS.gene058692	MS.gene059101	PPI
MS.gene27283	MS.gene058692	PPI
MS.gene058692	MS.gene033444	PPI
MS.gene058692	MS.gene58316	PPI
MS.gene058692	MS.gene033430	PPI
MS.gene58781	MS.gene058692	PPI
MS.gene058692	MS.gene58321	PPI
MS.gene058692	MS.gene87564	PPI
MS.gene058692	MS.gene58315	PPI
MS.gene058692	MS.gene36595	PPI
MS.gene44886	MS.gene058692	PPI
MS.gene87562	MS.gene058692	PPI
MS.gene058692	MS.gene045140	PPI
MS.gene058692	MS.gene041473	PPI
MS.gene87569	MS.gene058692	PPI
MS.gene058692	MS.gene50311	PPI
MS.gene058692	MS.gene88780	PPI
MS.gene041491	MS.gene058692	PPI
MS.gene058692	MS.gene064112	PPI
MS.gene058692	MS.gene058989	PPI
MS.gene058692	MS.gene036556	PPI
MS.gene058692	MS.gene57538	PPI
MS.gene058692	MS.gene041468	PPI
MS.gene058692	MS.gene060367	PPI
MS.gene058692	MS.gene058693	PPI
MS.gene058692	MS.gene27319	PPI
MS.gene058692	MS.gene64001	PPI
MS.gene058692	MS.gene015089	PPI
MS.gene059096	MS.gene058692	PPI
MS.gene058692	MS.gene041395	PPI
MS.gene058692	MS.gene066641	PPI
MS.gene058692	MS.gene51189	PPI
MS.gene019505	MS.gene058692	PPI
MS.gene058692	MS.gene046958	PPI
MS.gene045476	MS.gene058692	PPI
MS.gene058692	MS.gene24286	PPI
MS.gene058692	MS.gene066635	PPI
MS.gene034690	MS.gene058692	PPI
MS.gene26949	MS.gene058692	PPI
MS.gene058692	MS.gene58783	PPI
MS.gene036760	MS.gene058692	PPI
MS.gene058692	MS.gene40988	PPI
MS.gene058692	MS.gene24173	PPI
MS.gene058692	MS.gene036584	PPI
MS.gene058692	MS.gene036662	PPI
MS.gene058692	MS.gene88776	PPI
MS.gene058692	MS.gene42451	PPI
MS.gene50298	MS.gene058692	PPI
MS.gene058692	MS.gene035261	PPI
MS.gene058692	MS.gene023999	PPI
MS.gene058692	MS.gene070461	PPI
MS.gene058692	MS.gene69307	PPI
MS.gene058692	MS.gene036581	PPI
MS.gene058692	MS.gene019507	PPI
MS.gene058692	MS.gene033431	PPI
MS.gene019506	MS.gene058692	PPI
MS.gene058692	MS.gene000036	PPI
MS.gene058692	MS.gene50320	PPI
MS.gene058692	MS.gene58314	PPI
MS.gene058692	MS.gene87557	PPI
MS.gene69309	MS.gene058692	PPI
MS.gene058692	MS.gene51199	PPI
MS.gene058692	MS.gene035263	PPI
MS.gene058692	MS.gene67501	PPI
MS.gene058692	MS.gene96406	PPI
MS.gene058692	MS.gene27285	PPI
MS.gene058692	MS.gene035262	PPI
MS.gene058692	MS.gene77857	PPI
MS.gene034686	MS.gene058692	PPI
MS.gene058692	MS.gene028390	PPI
MS.gene070461	MS.gene058692	PPI
MS.gene058692	MS.gene40878	PPI
MS.gene058692	MS.gene57526	PPI
MS.gene058692	MS.gene069075	PPI
MS.gene87559	MS.gene058692	PPI
MS.gene058692	MS.gene047279	PPI
MS.gene058692	MS.gene060370	PPI
MS.gene058692	MS.gene50305	PPI
MS.gene058692	MS.gene024002	PPI
MS.gene058692	MS.gene032969	PPI
MS.gene058692	MS.gene68890	PPI
MS.gene058692	MS.gene041392	PPI
MS.gene058692	MS.gene50297	PPI
MS.gene058692	MS.gene42445	PPI
MS.gene058692	MS.gene86273	PPI
MS.gene81242	MS.gene058692	PPI
MS.gene058692	MS.gene26830	PPI
MS.gene058692	MS.gene40985	PPI
MS.gene058692	MS.gene22715	PPI
MS.gene058692	MS.gene038756	PPI
MS.gene058692	MS.gene92376	PPI
MS.gene058692	MS.gene51207	PPI
MS.gene058692	MS.gene63657	PPI
MS.gene058692	MS.gene059157	PPI
MS.gene51202	MS.gene058692	PPI
MS.gene058692	MS.gene57527	PPI
MS.gene058692	MS.gene024004	PPI
MS.gene058692	MS.gene070462	PPI
MS.gene058692	MS.gene061240	PPI
MS.gene058692	MS.gene54049	PPI
MS.gene058692	MS.gene031590	PPI
MS.gene064111	MS.gene058692	PPI
MS.gene26829	MS.gene058692	PPI
MS.gene064104	MS.gene058692	PPI
MS.gene058692	MS.gene064086	PPI
MS.gene058692	MS.gene035234	PPI
MS.gene75875	MS.gene058692	PPI
MS.gene058692	MS.gene066639	PPI
MS.gene058692	MS.gene50332	PPI
MS.gene058692	MS.gene42447	PPI
MS.gene058692	MS.gene024979	PPI
MS.gene058692	MS.gene041475	PPI
MS.gene058692	MS.gene43789	PPI
MS.gene058692	MS.gene64203	PPI
MS.gene58722	MS.gene058692	PPI
MS.gene064091	MS.gene058692	PPI
MS.gene058692	MS.gene24826	PPI
MS.gene058692	MS.gene40904	PPI
MS.gene058692	MS.gene044425	PPI
MS.gene43796	MS.gene058692	PPI
MS.gene058692	MS.gene43790	PPI
MS.gene058692	MS.gene032970	PPI
MS.gene058692	MS.gene57537	PPI
MS.gene058692	MS.gene59637	PPI
MS.gene058692	MS.gene033426	PPI
MS.gene58313	MS.gene058692	PPI
MS.gene058692	MS.gene27022	PPI
MS.gene058692	MS.gene57530	PPI
MS.gene066622	MS.gene058692	PPI
MS.gene058692	MS.gene97996	PPI
MS.gene44883	MS.gene058692	PPI
MS.gene058692	MS.gene87585	PPI
MS.gene058692	MS.gene041390	PPI
MS.gene058692	MS.gene024009	PPI
MS.gene058692	MS.gene036599	PPI
MS.gene058692	MS.gene40887	PPI
MS.gene058692	MS.gene87200	PPI
MS.gene058692	MS.gene42444	PPI
MS.gene058692	MS.gene67687	PPI
MS.gene058692	MS.gene62398	PPI
MS.gene058692	MS.gene26101	PPI
MS.gene41046	MS.gene058692	PPI
MS.gene87588	MS.gene058692	PPI
MS.gene017412	MS.gene058692	PPI
MS.gene058692	MS.gene006705	PPI
MS.gene058692	MS.gene061241	PPI
MS.gene058692	MS.gene035237	PPI
MS.gene058692	MS.gene51188	PPI
MS.gene009883	MS.gene058692	PPI
MS.gene058692	MS.gene50309	PPI
MS.gene058692	MS.gene041394	PPI
MS.gene058692	MS.gene03060	PPI
MS.gene058692	MS.gene036664	PPI
MS.gene031591	MS.gene058692	PPI
MS.gene058692	MS.gene053257	PPI
MS.gene058692	MS.gene58241	PPI
MS.gene058692	MS.gene77858	PPI
MS.gene058692	MS.gene51201	PPI
MS.gene058692	MS.gene064109	PPI
MS.gene058692	MS.gene058696	PPI
MS.gene058692	MS.gene009893	PPI
MS.gene058692	MS.gene045475	PPI
MS.gene058692	MS.gene63655	PPI
MS.gene058692	MS.gene50336	PPI
MS.gene058692	MS.gene39262	PPI
MS.gene058692	MS.gene77704	PPI
MS.gene96126	MS.gene058692	PPI
MS.gene016524	MS.gene058692	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058692.t1	MTR_8g102520	64.977	217	70	1	1	211	106	322	2.34e-91	271
MS.gene058692.t1	MTR_7g079400	57.466	221	84	2	1	211	117	337	1.13e-78	239
MS.gene058692.t1	MTR_8g098830	63.529	170	55	2	22	185	32	200	1.92e-69	212
MS.gene058692.t1	MTR_7g079450	69.286	140	39	1	72	211	2	137	9.97e-66	199
MS.gene058692.t1	MTR_7g079370	52.535	217	93	3	2	209	139	354	1.82e-60	193
MS.gene058692.t1	MTR_2g048580	54.000	200	72	7	21	211	154	342	4.42e-55	179
MS.gene058692.t1	MTR_6g060650	44.749	219	101	9	2	210	164	372	3.66e-46	156
MS.gene058692.t1	MTR_7g079420	52.973	185	69	7	40	211	965	1144	4.21e-46	163
MS.gene058692.t1	MTR_4g117720	43.379	219	104	7	2	207	162	373	1.71e-43	149
MS.gene058692.t1	MTR_4g094365	43.439	221	103	9	2	211	155	364	4.41e-43	148
MS.gene058692.t1	MTR_5g070088	42.466	219	106	8	2	207	170	381	2.23e-40	142
MS.gene058692.t1	MTR_4g109280	41.743	218	110	8	4	211	149	359	2.80e-40	140
MS.gene058692.t1	MTR_4g118380	44.670	197	89	6	2	183	166	357	3.69e-40	140
MS.gene058692.t1	MTR_4g116330	43.379	219	104	8	4	211	171	380	2.32e-39	139
MS.gene058692.t1	MTR_3g103020	41.553	219	113	7	3	211	165	378	9.40e-38	134
MS.gene058692.t1	MTR_1g055175	39.196	199	111	4	21	211	5	201	1.26e-37	130
MS.gene058692.t1	MTR_8g433030	42.326	215	104	8	4	207	133	338	1.35e-37	133
MS.gene058692.t1	MTR_4g109270	41.096	219	107	8	3	211	158	364	2.88e-37	133
MS.gene058692.t1	MTR_8g032390	42.326	215	104	8	4	207	166	371	2.91e-37	133
MS.gene058692.t1	MTR_4g118370	40.000	210	107	5	2	208	64	257	3.28e-37	130
MS.gene058692.t1	MTR_8g040935	41.791	201	97	8	25	211	14	208	8.54e-37	128
MS.gene058692.t1	MTR_3g034180	38.696	230	109	9	2	210	270	488	8.35e-36	131
MS.gene058692.t1	MTR_1g055135	40.541	222	118	6	2	211	156	375	1.70e-35	129
MS.gene058692.t1	MTR_5g070130	40.724	221	112	9	2	207	156	372	3.65e-35	128
MS.gene058692.t1	MTR_5g070080	42.081	221	109	9	2	211	174	386	7.58e-35	127
MS.gene058692.t1	MTR_4g118400	43.077	195	78	8	22	205	122	294	7.88e-35	125
MS.gene058692.t1	MTR_4g117850	38.356	219	116	7	3	207	163	376	8.95e-35	127
MS.gene058692.t1	MTR_4g116320	41.014	217	104	9	3	205	46	252	1.61e-34	123
MS.gene058692.t1	MTR_1g055195	39.732	224	107	8	2	211	269	478	2.63e-34	127
MS.gene058692.t1	MTR_4g117750	39.910	223	117	6	2	210	139	358	2.83e-34	127
MS.gene058692.t1	MTR_4g117750	46.296	108	49	4	104	205	373	477	7.96e-20	87.0
MS.gene058692.t1	MTR_8g433040	40.845	213	112	7	2	211	163	364	5.21e-34	124
MS.gene058692.t1	MTR_8g032380	40.845	213	112	7	2	211	163	364	5.21e-34	124
MS.gene058692.t1	MTR_5g097210	37.089	213	122	6	2	206	150	358	1.84e-32	120
MS.gene058692.t1	MTR_3g034130	38.500	200	101	7	2	184	156	350	5.25e-32	119
MS.gene058692.t1	MTR_4g117770	39.091	220	114	7	3	211	157	367	3.81e-31	117
MS.gene058692.t1	MTR_4g117810	39.091	220	114	7	3	211	157	367	3.81e-31	117
MS.gene058692.t1	MTR_4g122850	38.739	222	117	10	2	211	150	364	7.36e-31	116
MS.gene058692.t1	MTR_4g117530	35.814	215	89	7	3	211	82	253	1.37e-30	113
MS.gene058692.t1	MTR_4g023130	39.091	220	105	8	2	210	111	312	2.41e-30	114
MS.gene058692.t1	MTR_4g116330	39.437	213	82	7	4	211	171	341	6.38e-30	113
MS.gene058692.t1	MTR_1g055250	38.028	213	117	8	2	204	56	263	8.81e-30	112
MS.gene058692.t1	MTR_4g117870	39.070	215	87	9	2	211	92	267	8.82e-30	111
MS.gene058692.t1	MTR_4g023080	39.091	220	105	8	2	210	152	353	1.13e-29	113
MS.gene058692.t1	MTR_1g055165	39.412	170	93	4	50	211	151	318	7.38e-29	110
MS.gene058692.t1	MTR_6g463430	38.071	197	104	7	24	211	15	202	7.90e-29	107
MS.gene058692.t1	MTR_4g117780	37.727	220	117	8	3	211	157	367	1.26e-28	110
MS.gene058692.t1	MTR_4g118360	43.651	126	70	1	87	211	1	126	4.20e-28	103
MS.gene058692.t1	MTR_4g021785	38.288	222	107	10	2	211	152	355	5.73e-28	108
MS.gene058692.t1	MTR_3g034160	36.323	223	120	7	4	210	158	374	1.86e-26	104
MS.gene058692.t1	MTR_4g023120	35.745	235	116	10	2	211	146	370	2.35e-26	104
MS.gene058692.t1	MTR_4g023380	35.814	215	92	8	25	205	169	371	2.64e-25	101
MS.gene058692.t1	MTR_4g023070	35.169	236	114	9	2	210	146	369	3.70e-25	101
MS.gene058692.t1	MTR_4g023090	36.726	226	106	10	4	205	166	378	3.87e-25	101
MS.gene058692.t1	MTR_4g023190	36.199	221	111	10	2	209	154	357	6.12e-25	100
MS.gene058692.t1	MTR_4g023150	36.199	221	112	10	2	209	154	358	6.83e-24	97.4
MS.gene058692.t1	MTR_5g023000	50.538	93	43	2	121	211	8	99	1.85e-23	90.5
MS.gene058692.t1	MTR_4g023440	34.742	213	95	8	1	211	162	332	7.14e-23	94.4
MS.gene058692.t1	MTR_4g023200	34.842	221	115	10	2	209	154	358	5.76e-22	92.4
MS.gene058692.t1	MTR_4g122860	34.392	189	90	7	30	210	157	319	5.86e-21	89.4
MS.gene058692.t1	MTR_4g121580	35.468	203	101	8	2	201	164	339	8.93e-20	86.7
MS.gene058692.t1	MTR_4g114700	32.524	206	85	6	4	202	60	218	1.19e-17	79.0
MS.gene058692.t1	MTR_7g117720	52.874	87	36	3	125	206	186	272	1.57e-17	79.0
MS.gene058692.t1	MTR_0128s0110	27.564	156	81	6	37	161	4	158	1.39e-11	61.6
MS.gene058692.t1	MTR_4g117430	35.897	117	55	4	2	112	49	151	3.10e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 43 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTATGATTTGATGGTATT+TGG	0.157846	7.4:+26541986	MS.gene058692:CDS
CGATGATTACATTGTAGTTT+TGG	0.211333	7.4:+26541694	MS.gene058692:CDS
TTGCTTCTGATTTGCTTTAT+AGG	0.235745	7.4:+26541804	MS.gene058692:CDS
CACAACTTGTAAAGCATATT+GGG	0.268178	7.4:-26542135	None:intergenic
CCACAACTTGTAAAGCATAT+TGG	0.287389	7.4:-26542136	None:intergenic
TCTTGAATGGTTCTATTCAT+TGG	0.308230	7.4:+26541867	MS.gene058692:CDS
TCATAGAAATTATGATTTGA+TGG	0.315173	7.4:+26541979	MS.gene058692:CDS
TTTCCTCCAGTAATATTTGA+TGG	0.321228	7.4:-26541720	None:intergenic
ATTCAAGAACGACCCGACTA+TGG	0.322369	7.4:-26541852	None:intergenic
ACTCTATATACACCGTTGTT+TGG	0.341638	7.4:-26542261	None:intergenic
CTCTATATACACCGTTGTTT+GGG	0.346270	7.4:-26542260	None:intergenic
TGTCATTTCCTTTAAATCAA+TGG	0.363707	7.4:-26541912	None:intergenic
ATAGGTTTAAAATTAAGATA+TGG	0.364548	7.4:+26542035	MS.gene058692:CDS
TGGGGTCCATCAAATATTAC+TGG	0.366116	7.4:+26541714	MS.gene058692:CDS
GAATGGTTCTATTCATTGGC+TGG	0.382596	7.4:+26541871	MS.gene058692:CDS
TCAGTGTATGGTATGTGAAT+AGG	0.396150	7.4:+26542017	MS.gene058692:CDS
TAAGCTTGCTCAGTGCCATC+AGG	0.418945	7.4:-26542298	None:intergenic
ATATCACTATCAAAATAATC+TGG	0.420762	7.4:-26541953	None:intergenic
ACAAGTTGTGGTGATATAGT+TGG	0.420850	7.4:+26542148	MS.gene058692:CDS
TAGGTTTAAAATTAAGATAT+GGG	0.433947	7.4:+26542036	MS.gene058692:CDS
CCAATATGCTTTACAAGTTG+TGG	0.444016	7.4:+26542136	MS.gene058692:CDS
GCTAATCCAACAGCAGCATC+TGG	0.462581	7.4:-26542172	None:intergenic
TTGGCGGACTTATCAGTGTA+TGG	0.462616	7.4:+26542005	MS.gene058692:CDS
TCTCATTGAGAGCTAATAAG+TGG	0.462649	7.4:+26541768	MS.gene058692:CDS
ATAGTCGGGTCGTTCTTGAA+TGG	0.471817	7.4:+26541854	MS.gene058692:CDS
CTGAAGTTGGTCCCATAGTC+GGG	0.472332	7.4:+26541840	MS.gene058692:CDS
AATACAAAGTGCATTCATCT+TGG	0.486620	7.4:+26542068	MS.gene058692:CDS
TATGATTTGATGGTATTTGG+CGG	0.504914	7.4:+26541989	MS.gene058692:CDS
ATTCTAGAGTATCACTCCTA+TGG	0.526361	7.4:+26542217	MS.gene058692:CDS
TCTGAAGTTGGTCCCATAGT+CGG	0.531749	7.4:+26541839	MS.gene058692:CDS
ATCAAATCATAATTTCTATG+AGG	0.536641	7.4:-26541977	None:intergenic
GAAAACTAGCTCGATTGAGT+TGG	0.537743	7.4:+26541739	MS.gene058692:CDS
TTCAAGAACGACCCGACTAT+GGG	0.546092	7.4:-26541851	None:intergenic
GTTGGACCAGATGCTGCTGT+TGG	0.573521	7.4:+26542166	MS.gene058692:CDS
AAGACTGCAAGCTCTGAAGT+TGG	0.574592	7.4:+26541827	MS.gene058692:CDS
TCTCTGCTTTCACTCCCTGA+TGG	0.581645	7.4:+26542283	MS.gene058692:CDS
AAGCTTGCTCAGTGCCATCA+GGG	0.607041	7.4:-26542297	None:intergenic
TTTATAGTAAGAGTCGCCAT+AGG	0.613089	7.4:-26542233	None:intergenic
TTAGCAAAGCTTAATGACAA+AGG	0.620954	7.4:+26542190	MS.gene058692:CDS
TAATAAGTGGAAACAAGTTG+AGG	0.642343	7.4:+26541781	MS.gene058692:CDS
ACAACTTGTAAAGCATATTG+GGG	0.651604	7.4:-26542134	None:intergenic
GGTCCATCAAATATTACTGG+AGG	0.665756	7.4:+26541717	MS.gene058692:CDS
CTATAAAAGATCCCAAACAA+CGG	0.697525	7.4:+26542249	MS.gene058692:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAGGTTTAAAATTAAGATA+TGG	+	chr7.4:26542035-26542054	MS.gene058692:CDS	15.0%
!!!	TAGGTTTAAAATTAAGATAT+GGG	+	chr7.4:26542036-26542055	MS.gene058692:CDS	15.0%
!!	ATATCACTATCAAAATAATC+TGG	-	chr7.4:26541956-26541975	None:intergenic	20.0%
!!	ATCAAATCATAATTTCTATG+AGG	-	chr7.4:26541980-26541999	None:intergenic	20.0%
!!	TCATAGAAATTATGATTTGA+TGG	+	chr7.4:26541979-26541998	MS.gene058692:CDS	20.0%
!!!	AATTATGATTTGATGGTATT+TGG	+	chr7.4:26541986-26542005	MS.gene058692:CDS	20.0%
!!!	TATTTTTGCCATTGATTTAA+AGG	+	chr7.4:26541904-26541923	MS.gene058692:CDS	20.0%
!!	GATGATTACATTGTAGTTTT+GGG	+	chr7.4:26541695-26541714	MS.gene058692:CDS	25.0%
!!	TGTCATTTCCTTTAAATCAA+TGG	-	chr7.4:26541915-26541934	None:intergenic	25.0%
!!!	ATGATTACATTGTAGTTTTG+GGG	+	chr7.4:26541696-26541715	MS.gene058692:CDS	25.0%
	AATACAAAGTGCATTCATCT+TGG	+	chr7.4:26542068-26542087	MS.gene058692:CDS	30.0%
	ACAACTTGTAAAGCATATTG+GGG	-	chr7.4:26542137-26542156	None:intergenic	30.0%
	CACAACTTGTAAAGCATATT+GGG	-	chr7.4:26542138-26542157	None:intergenic	30.0%
	CTATAAAAGATCCCAAACAA+CGG	+	chr7.4:26542249-26542268	MS.gene058692:CDS	30.0%
	TAATAAGTGGAAACAAGTTG+AGG	+	chr7.4:26541781-26541800	MS.gene058692:CDS	30.0%
	TTAGCAAAGCTTAATGACAA+AGG	+	chr7.4:26542190-26542209	MS.gene058692:CDS	30.0%
	TTTCCTCCAGTAATATTTGA+TGG	-	chr7.4:26541723-26541742	None:intergenic	30.0%
!	CGATGATTACATTGTAGTTT+TGG	+	chr7.4:26541694-26541713	MS.gene058692:CDS	30.0%
!	TATGATTTGATGGTATTTGG+CGG	+	chr7.4:26541989-26542008	MS.gene058692:CDS	30.0%
!	TCTTGAATGGTTCTATTCAT+TGG	+	chr7.4:26541867-26541886	MS.gene058692:CDS	30.0%
!!	TTGCTTCTGATTTGCTTTAT+AGG	+	chr7.4:26541804-26541823	MS.gene058692:CDS	30.0%
	ACAAGTTGTGGTGATATAGT+TGG	+	chr7.4:26542148-26542167	MS.gene058692:CDS	35.0%
	ACTCTATATACACCGTTGTT+TGG	-	chr7.4:26542264-26542283	None:intergenic	35.0%
	CCAATATGCTTTACAAGTTG+TGG	+	chr7.4:26542136-26542155	MS.gene058692:CDS	35.0%
	CCACAACTTGTAAAGCATAT+TGG	-	chr7.4:26542139-26542158	None:intergenic	35.0%
	CTCTATATACACCGTTGTTT+GGG	-	chr7.4:26542263-26542282	None:intergenic	35.0%
	TATTGGGGAAAAATTCAGAG+CGG	-	chr7.4:26542122-26542141	None:intergenic	35.0%
	TCAGTGTATGGTATGTGAAT+AGG	+	chr7.4:26542017-26542036	MS.gene058692:CDS	35.0%
	TCTCATTGAGAGCTAATAAG+TGG	+	chr7.4:26541768-26541787	MS.gene058692:CDS	35.0%
	TTTATAGTAAGAGTCGCCAT+AGG	-	chr7.4:26542236-26542255	None:intergenic	35.0%
!!	ATTCTAGAGTATCACTCCTA+TGG	+	chr7.4:26542217-26542236	MS.gene058692:CDS	35.0%
	ATTGGGGAAAAATTCAGAGC+GGG	-	chr7.4:26542121-26542140	None:intergenic	40.0%
	GAAAACTAGCTCGATTGAGT+TGG	+	chr7.4:26541739-26541758	MS.gene058692:CDS	40.0%
	GGTCCATCAAATATTACTGG+AGG	+	chr7.4:26541717-26541736	MS.gene058692:CDS	40.0%
	TGGGGTCCATCAAATATTAC+TGG	+	chr7.4:26541714-26541733	MS.gene058692:CDS	40.0%
!	GAATGGTTCTATTCATTGGC+TGG	+	chr7.4:26541871-26541890	MS.gene058692:CDS	40.0%
	ATAGTCGGGTCGTTCTTGAA+TGG	+	chr7.4:26541854-26541873	MS.gene058692:CDS	45.0%
	ATTCAAGAACGACCCGACTA+TGG	-	chr7.4:26541855-26541874	None:intergenic	45.0%
	TTCAAGAACGACCCGACTAT+GGG	-	chr7.4:26541854-26541873	None:intergenic	45.0%
!	TCTGAAGTTGGTCCCATAGT+CGG	+	chr7.4:26541839-26541858	MS.gene058692:CDS	45.0%
!!	AAGACTGCAAGCTCTGAAGT+TGG	+	chr7.4:26541827-26541846	MS.gene058692:CDS	45.0%
!!	TTGGCGGACTTATCAGTGTA+TGG	+	chr7.4:26542005-26542024	MS.gene058692:CDS	45.0%
	GCTAATCCAACAGCAGCATC+TGG	-	chr7.4:26542175-26542194	None:intergenic	50.0%
	TCTCTGCTTTCACTCCCTGA+TGG	+	chr7.4:26542283-26542302	MS.gene058692:CDS	50.0%
!	AAGCTTGCTCAGTGCCATCA+GGG	-	chr7.4:26542300-26542319	None:intergenic	50.0%
!	CTGAAGTTGGTCCCATAGTC+GGG	+	chr7.4:26541840-26541859	MS.gene058692:CDS	50.0%
!	TAAGCTTGCTCAGTGCCATC+AGG	-	chr7.4:26542301-26542320	None:intergenic	50.0%
	GTTGGACCAGATGCTGCTGT+TGG	+	chr7.4:26542166-26542185	MS.gene058692:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	26541686	26542321	26541686	ID=MS.gene058692
chr7.4	mRNA	26541686	26542321	26541686	ID=MS.gene058692.t1;Parent=MS.gene058692
chr7.4	exon	26541686	26542321	26541686	ID=MS.gene058692.t1.exon1;Parent=MS.gene058692.t1
chr7.4	CDS	26541686	26542321	26541686	ID=cds.MS.gene058692.t1;Parent=MS.gene058692.t1

Gene Sequence

>MS.gene058692

ATGTCAAGCGATGATTACATTGTAGTTTTGGGGTCCATCAAATATTACTGGAGGAAAACTAGCTCGATTGAGTTGGAGATTTTCTCATTGAGAGCTAATAAGTGGAAACAAGTTGAGGTTGCTTCTGATTTGCTTTATAGGAAGACTGCAAGCTCTGAAGTTGGTCCCATAGTCGGGTCGTTCTTGAATGGTTCTATTCATTGGCTGGTTCATAATTTTATTTTTGCCATTGATTTAAAGGAAATGACAATGTCAGAGATAACTCTTCCAGATTATTTTGATAGTGATATTCCTCATAGAAATTATGATTTGATGGTATTTGGCGGACTTATCAGTGTATGGTATGTGAATAGGTTTAAAATTAAGATATGGGTGATGCAAGAATACAAAGTGCATTCATCTTGGTCTAAGACTTTTGAATTTTCTTTCTCTCCCGCTCTGAATTTTTCCCCAATATGCTTTACAAGTTGTGGTGATATAGTTGGACCAGATGCTGCTGTTGGATTAGCAAAGCTTAATGACAAAGGACAAATTCTAGAGTATCACTCCTATGGCGACTCTTACTATAAAAGATCCCAAACAACGGTGTATATAGAGTCTCTGCTTTCACTCCCTGATGGCACTGAGCAAGCTTAA

Protein sequence

>MS.gene058692.t1

MSSDDYIVVLGSIKYYWRKTSSIELEIFSLRANKWKQVEVASDLLYRKTASSEVGPIVGSFLNGSIHWLVHNFIFAIDLKEMTMSEITLPDYFDSDIPHRNYDLMVFGGLISVWYVNRFKIKIWVMQEYKVHSSWSKTFEFSFSPALNFSPICFTSCGDIVGPDAAVGLAKLNDKGQILEYHSYGDSYYKRSQTTVYIESLLSLPDGTEQA