AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58239

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58239.t1 MTR_8g433040 75.477 367 73 3 1 361 9 364 0.0 537
MS.gene58239.t1 MTR_8g032380 75.477 367 73 3 1 361 9 364 0.0 537
MS.gene58239.t1 MTR_8g032390 71.745 361 76 4 1 356 31 370 1.57e-174 490
MS.gene58239.t1 MTR_4g094365 57.534 365 144 5 5 361 3 364 1.72e-134 388
MS.gene58239.t1 MTR_8g433030 59.834 361 86 8 1 356 31 337 2.08e-128 372
MS.gene58239.t1 MTR_4g122850 58.989 356 128 11 21 361 12 364 2.20e-128 373
MS.gene58239.t1 MTR_3g103020 56.522 368 139 10 6 359 16 376 6.69e-128 372
MS.gene58239.t1 MTR_4g109270 55.801 362 141 11 10 359 8 362 8.35e-119 348
MS.gene58239.t1 MTR_3g034180 54.111 377 142 12 8 361 121 489 4.09e-117 348
MS.gene58239.t1 MTR_6g060650 55.795 371 138 11 9 359 7 371 3.93e-116 342
MS.gene58239.t1 MTR_4g117780 53.022 364 152 11 10 361 11 367 2.10e-115 340
MS.gene58239.t1 MTR_4g023080 54.444 360 142 10 8 359 7 352 6.56e-115 338
MS.gene58239.t1 MTR_4g021785 54.749 358 145 8 8 359 7 353 5.43e-114 335
MS.gene58239.t1 MTR_4g023090 52.575 369 150 9 9 356 15 379 1.42e-112 333
MS.gene58239.t1 MTR_3g034130 55.620 347 126 10 8 333 7 346 1.92e-111 330
MS.gene58239.t1 MTR_4g117850 53.134 367 143 11 9 358 22 376 2.60e-111 330
MS.gene58239.t1 MTR_4g109280 54.098 366 146 12 5 359 3 357 2.78e-111 329
MS.gene58239.t1 MTR_3g034160 54.839 372 139 11 8 357 7 371 3.03e-111 329
MS.gene58239.t1 MTR_4g117770 53.825 366 148 11 9 361 10 367 4.29e-111 328
MS.gene58239.t1 MTR_4g117810 53.825 366 148 11 9 361 10 367 4.29e-111 328
MS.gene58239.t1 MTR_4g116330 52.011 373 155 12 1 357 12 376 9.50e-110 326
MS.gene58239.t1 MTR_4g023070 50.933 375 150 10 10 359 3 368 2.67e-109 324
MS.gene58239.t1 MTR_4g117720 51.482 371 128 11 1 358 44 375 2.30e-107 320
MS.gene58239.t1 MTR_4g118380 55.085 354 126 9 9 334 7 355 1.71e-106 317
MS.gene58239.t1 MTR_4g023120 48.806 377 159 10 10 361 3 370 8.54e-104 310
MS.gene58239.t1 MTR_4g023130 50.565 354 124 8 8 359 7 311 7.62e-101 300
MS.gene58239.t1 MTR_4g023380 49.357 389 149 10 3 361 9 379 1.75e-100 302
MS.gene58239.t1 MTR_5g070130 51.075 372 151 14 9 357 10 373 2.20e-100 302
MS.gene58239.t1 MTR_5g097210 49.865 371 159 12 3 358 2 360 1.35e-98 297
MS.gene58239.t1 MTR_1g055135 47.769 381 164 13 2 359 5 373 1.21e-97 295
MS.gene58239.t1 MTR_5g070080 47.938 388 162 13 1 356 1 380 2.09e-97 294
MS.gene58239.t1 MTR_4g023190 49.864 369 163 10 1 359 1 357 1.88e-96 291
MS.gene58239.t1 MTR_4g121580 47.814 366 144 11 3 351 4 339 3.98e-95 289
MS.gene58239.t1 MTR_4g023200 49.864 369 164 10 1 359 1 358 4.31e-95 287
MS.gene58239.t1 MTR_4g023150 48.641 368 170 10 1 359 1 358 1.98e-93 283
MS.gene58239.t1 MTR_5g070088 45.876 388 167 13 4 356 1 380 7.93e-93 283
MS.gene58239.t1 MTR_4g023440 49.030 361 131 10 9 361 17 332 4.63e-89 271
MS.gene58239.t1 MTR_4g116330 46.113 373 138 12 1 357 12 337 6.48e-87 266
MS.gene58239.t1 MTR_1g055165 43.443 366 150 7 1 359 1 316 2.05e-83 256
MS.gene58239.t1 MTR_8g013010 54.851 268 105 7 5 263 49 309 4.26e-82 253
MS.gene58239.t1 MTR_4g117750 47.170 371 159 14 8 357 1 355 8.56e-79 249
MS.gene58239.t1 MTR_4g117750 57.273 110 44 2 254 360 373 482 1.93e-32 127
MS.gene58239.t1 MTR_4g117870 47.475 297 110 7 72 361 10 267 1.04e-76 237
MS.gene58239.t1 MTR_1g055195 48.958 288 112 12 86 357 206 474 5.23e-72 232
MS.gene58239.t1 MTR_4g118400 47.735 287 108 10 81 355 38 294 3.60e-69 219
MS.gene58239.t1 MTR_7g079370 42.899 345 171 13 39 361 16 356 1.21e-66 214
MS.gene58239.t1 MTR_4g116320 54.419 215 87 4 153 358 43 255 3.73e-65 207
MS.gene58239.t1 MTR_6g463430 55.612 196 78 5 170 361 12 202 7.37e-61 194
MS.gene58239.t1 MTR_7g079400 44.983 289 133 11 88 359 56 335 5.66e-60 196
MS.gene58239.t1 MTR_4g116340 50.000 236 92 6 3 229 29 247 5.49e-59 191
MS.gene58239.t1 MTR_8g040935 53.266 199 84 5 169 359 9 206 3.49e-58 187
MS.gene58239.t1 MTR_8g102520 37.330 367 167 13 6 359 4 320 4.87e-56 186
MS.gene58239.t1 MTR_2g048580 36.096 374 184 16 1 356 1 337 1.92e-53 180
MS.gene58239.t1 MTR_4g118370 44.048 252 103 7 118 358 33 257 4.54e-53 176
MS.gene58239.t1 MTR_1g055175 48.969 194 90 5 173 359 8 199 3.21e-50 167
MS.gene58239.t1 MTR_1g055250 46.667 210 100 7 146 347 47 252 3.36e-48 166
MS.gene58239.t1 MTR_4g117530 42.324 241 99 7 123 359 47 251 1.52e-46 159
MS.gene58239.t1 MTR_4g114700 39.382 259 96 7 106 352 9 218 1.20e-43 151
MS.gene58239.t1 MTR_4g117430 53.459 159 64 5 106 263 3 152 8.56e-43 146
MS.gene58239.t1 MTR_7g117720 45.192 208 90 6 1 201 1 191 1.04e-42 150
MS.gene58239.t1 MTR_7g117720 51.724 87 35 3 277 356 186 272 1.60e-13 70.5
MS.gene58239.t1 MTR_8g098830 41.026 195 102 7 167 355 28 215 1.71e-35 129
MS.gene58239.t1 MTR_7g079420 35.333 300 140 14 68 355 881 1138 1.45e-34 135
MS.gene58239.t1 MTR_4g118360 56.000 125 46 4 239 357 1 122 4.87e-33 120
MS.gene58239.t1 MTR_8g101580 29.917 361 225 12 10 353 45 394 1.95e-32 125
MS.gene58239.t1 MTR_1g097490 29.775 356 224 11 10 353 49 390 1.60e-31 123
MS.gene58239.t1 MTR_4g122860 40.838 191 78 5 179 361 157 320 1.96e-31 121
MS.gene58239.t1 MTR_4g122860 46.835 79 38 2 9 85 69 145 6.06e-11 63.5
MS.gene58239.t1 MTR_5g023000 61.856 97 34 2 266 359 1 97 2.32e-31 114
MS.gene58239.t1 MTR_3g007330 32.459 305 160 10 10 293 48 327 2.46e-31 122
MS.gene58239.t1 MTR_2g021150 30.081 369 221 17 9 353 13 368 5.10e-31 121
MS.gene58239.t1 MTR_3g009310 32.239 335 192 12 10 328 42 357 1.74e-30 120
MS.gene58239.t1 MTR_5g057790 31.373 306 169 12 10 294 46 331 2.54e-30 119
MS.gene58239.t1 MTR_1g094210 29.006 362 219 14 10 353 57 398 8.84e-30 118
MS.gene58239.t1 MTR_3g013740 31.464 321 163 15 10 294 44 343 1.86e-29 117
MS.gene58239.t1 MTR_2g055970 30.295 373 212 14 8 353 209 560 2.07e-29 119
MS.gene58239.t1 MTR_5g057710 31.270 307 168 12 10 294 46 331 6.40e-29 115
MS.gene58239.t1 MTR_8g467140 32.119 302 181 11 6 294 28 318 6.68e-29 114
MS.gene58239.t1 MTR_1g094210 29.118 340 204 13 10 332 57 376 8.49e-29 115
MS.gene58239.t1 MTR_2g029990 28.532 361 230 13 11 353 52 402 1.07e-28 115
MS.gene58239.t1 MTR_5g022420 30.137 292 182 11 9 294 26 301 1.09e-28 115
MS.gene58239.t1 MTR_4g107820 30.033 303 178 10 10 296 36 320 1.48e-28 114
MS.gene58239.t1 MTR_4g107780 30.033 303 178 10 10 296 36 320 1.48e-28 114
MS.gene58239.t1 MTR_4g109290 42.138 159 54 3 9 162 8 133 1.54e-28 110
MS.gene58239.t1 MTR_3g007410 28.954 373 210 13 13 354 55 403 2.03e-28 114
MS.gene58239.t1 MTR_4g107820 30.033 303 178 10 10 296 36 320 2.08e-28 114
MS.gene58239.t1 MTR_4g107780 30.033 303 178 10 10 296 36 320 2.14e-28 114
MS.gene58239.t1 MTR_1g097560 29.121 364 212 14 10 353 36 373 2.95e-28 114
MS.gene58239.t1 MTR_4g055060 31.894 301 171 10 10 289 30 317 3.83e-28 113
MS.gene58239.t1 MTR_3g014540 32.154 311 178 12 10 301 29 325 1.19e-27 112
MS.gene58239.t1 MTR_1g050542 27.368 380 217 13 5 353 53 404 1.71e-27 112
MS.gene58239.t1 MTR_4g108820 30.405 296 153 10 9 296 41 291 2.01e-27 110
MS.gene58239.t1 MTR_4g030830 28.358 402 213 15 10 353 9 393 2.29e-27 111
MS.gene58239.t1 MTR_2g426020 27.763 389 228 18 10 357 6 382 2.85e-27 111
MS.gene58239.t1 MTR_3g007360 28.418 373 212 13 13 354 55 403 3.70e-27 111
MS.gene58239.t1 MTR_4g133170 25.698 358 214 14 10 338 4 338 4.78e-27 110
MS.gene58239.t1 MTR_2g021155 31.922 307 184 10 10 301 33 329 8.56e-27 112
MS.gene58239.t1 MTR_2g021155 27.948 229 128 10 98 304 688 901 6.52e-12 67.4
MS.gene58239.t1 MTR_2g046920 27.760 317 181 9 4 296 18 310 8.62e-27 109
MS.gene58239.t1 MTR_2g028160 26.667 390 238 17 10 355 5 390 1.65e-26 109
MS.gene58239.t1 MTR_5g057690 31.419 296 172 12 10 294 46 321 4.13e-26 108
MS.gene58239.t1 MTR_4g013180 28.042 378 221 15 8 342 9 378 7.52e-26 108
MS.gene58239.t1 MTR_7g055930 27.990 418 221 17 10 353 13 424 1.05e-25 107
MS.gene58239.t1 MTR_5g069120 41.935 155 81 4 20 166 1 154 1.55e-25 101
MS.gene58239.t1 MTR_7g079450 43.750 144 65 5 223 359 1 135 2.65e-25 99.8
MS.gene58239.t1 MTR_3g014570 31.833 311 161 13 10 293 29 315 3.71e-25 105
MS.gene58239.t1 MTR_3g006670 31.511 311 163 13 10 293 49 336 3.92e-25 105
MS.gene58239.t1 MTR_3g013770 30.960 323 174 13 10 303 33 335 3.98e-25 105
MS.gene58239.t1 MTR_2g046900 27.224 371 241 14 4 353 22 384 4.31e-25 105
MS.gene58239.t1 MTR_1g097330 28.363 342 221 10 10 337 16 347 5.38e-25 105
MS.gene58239.t1 MTR_7g055870 28.162 419 219 18 10 353 13 424 7.35e-25 105
MS.gene58239.t1 MTR_2g024110 27.937 383 224 19 10 357 4 369 7.52e-25 104
MS.gene58239.t1 MTR_7g056820 27.913 369 208 18 10 337 7 358 1.02e-24 103
MS.gene58239.t1 MTR_7g070880 28.125 384 207 16 10 332 21 396 1.08e-24 104
MS.gene58239.t1 MTR_0667s0010 26.513 347 219 10 10 328 6 344 1.32e-24 103
MS.gene58239.t1 MTR_4g061340 29.073 313 170 10 10 293 26 315 1.68e-24 103
MS.gene58239.t1 MTR_3g083640 29.967 307 184 12 10 302 55 344 2.12e-24 103
MS.gene58239.t1 MTR_6g021880 32.776 299 164 13 21 294 31 317 3.47e-24 102
MS.gene58239.t1 MTR_7g407070 30.421 309 179 13 10 289 32 333 3.77e-24 102
MS.gene58239.t1 MTR_2g028130 27.151 372 219 16 10 336 5 369 5.98e-24 102
MS.gene58239.t1 MTR_5g057020 30.479 292 175 10 10 294 46 316 6.28e-24 101
MS.gene58239.t1 MTR_0064s0160 29.630 324 175 14 9 289 41 354 9.31e-24 102
MS.gene58239.t1 MTR_7g070830 29.080 337 178 14 10 293 21 349 1.23e-23 101
MS.gene58239.t1 MTR_3g036430 27.302 315 182 12 10 314 20 297 1.27e-23 100
MS.gene58239.t1 MTR_3g007430 27.815 302 178 8 13 293 46 328 1.48e-23 100
MS.gene58239.t1 MTR_5g011200 31.104 299 183 14 10 294 17 306 1.75e-23 100
MS.gene58239.t1 MTR_6g034720 48.305 118 54 3 129 240 53 169 1.91e-23 97.1
MS.gene58239.t1 MTR_3g010390 28.972 321 185 14 10 298 33 342 1.92e-23 100
MS.gene58239.t1 MTR_4g037465 30.851 376 190 22 10 336 21 375 1.96e-23 100
MS.gene58239.t1 MTR_1g068835 27.759 299 190 9 10 293 4 291 3.57e-23 99.8
MS.gene58239.t1 MTR_3g036290 29.006 362 212 17 10 353 22 356 4.09e-23 99.4
MS.gene58239.t1 MTR_1g054575 28.763 299 191 10 5 294 47 332 9.62e-23 100
MS.gene58239.t1 MTR_7g070440 29.841 315 182 13 4 291 1 303 1.25e-22 98.2
MS.gene58239.t1 MTR_2g028110 27.249 378 231 16 10 359 4 365 1.49e-22 97.8
MS.gene58239.t1 MTR_2g031720 28.989 376 227 17 10 357 6 369 1.80e-22 97.8
MS.gene58239.t1 MTR_0128s0020 29.306 389 215 19 1 349 10 378 2.65e-22 97.4
MS.gene58239.t1 MTR_2g046830 28.025 314 184 10 4 296 19 311 2.66e-22 97.4
MS.gene58239.t1 MTR_1g115160 28.912 294 187 12 8 294 20 298 2.71e-22 97.1
MS.gene58239.t1 MTR_8g464770 27.128 376 236 12 9 355 11 377 3.04e-22 97.1
MS.gene58239.t1 MTR_7g060940 28.659 328 182 10 8 300 20 330 4.17e-22 96.7
MS.gene58239.t1 MTR_0044s0300 28.339 307 174 13 10 294 38 320 5.47e-22 96.3
MS.gene58239.t1 MTR_3g011060 29.358 327 176 12 10 302 28 333 5.47e-22 96.3
MS.gene58239.t1 MTR_3g009240 29.097 299 171 11 10 289 36 312 6.08e-22 96.3
MS.gene58239.t1 MTR_1g068860 27.759 299 192 9 10 293 4 293 6.18e-22 96.3
MS.gene58239.t1 MTR_2g021190 27.193 342 209 13 10 328 21 345 6.67e-22 95.9
MS.gene58239.t1 MTR_3g007270 29.355 310 180 14 10 293 47 343 6.79e-22 96.3
MS.gene58239.t1 MTR_1g068875 27.425 299 190 11 10 293 4 290 6.96e-22 95.9
MS.gene58239.t1 MTR_6g017280 25.888 394 239 15 4 353 3 387 9.41e-22 95.9
MS.gene58239.t1 MTR_4g019990 26.683 401 219 14 9 352 5 387 9.59e-22 95.9
MS.gene58239.t1 MTR_1g055070 31.274 259 150 11 10 243 49 304 1.20e-21 95.5
MS.gene58239.t1 MTR_2g031640 26.133 375 235 15 10 357 6 365 1.21e-21 95.5
MS.gene58239.t1 MTR_5g096710 28.389 391 218 17 10 353 23 398 1.26e-21 95.5
MS.gene58239.t1 MTR_5g056020 27.561 410 225 19 10 353 17 420 1.43e-21 96.3
MS.gene58239.t1 MTR_0115s0020 26.209 393 235 15 10 354 10 395 1.52e-21 95.1
MS.gene58239.t1 MTR_2g426070 27.244 312 193 9 11 293 7 313 1.78e-21 95.1
MS.gene58239.t1 MTR_7g066100 28.049 410 214 18 6 355 7 395 2.07e-21 94.7
MS.gene58239.t1 MTR_3g464470 28.101 395 223 16 4 353 1 379 2.73e-21 94.4
MS.gene58239.t1 MTR_3g436150 29.605 304 182 12 10 289 32 327 2.96e-21 94.4
MS.gene58239.t1 MTR_8g073550 34.171 199 100 10 9 188 29 215 3.47e-21 91.3
MS.gene58239.t1 MTR_2g426060 28.616 318 182 16 10 293 6 312 3.70e-21 94.4
MS.gene58239.t1 MTR_2g031680 26.198 313 201 10 10 307 6 303 3.89e-21 94.0
MS.gene58239.t1 MTR_2g021770 28.162 419 224 21 1 356 1 405 4.00e-21 94.0
MS.gene58239.t1 MTR_2g021800 26.173 405 233 14 9 354 15 412 4.05e-21 94.4
MS.gene58239.t1 MTR_5g069760 27.371 369 201 16 8 333 4 348 4.76e-21 93.6
MS.gene58239.t1 MTR_3g023930 29.201 363 209 17 10 353 34 367 5.39e-21 93.2
MS.gene58239.t1 MTR_1g054725 26.615 387 212 14 9 353 19 375 5.41e-21 93.6
MS.gene58239.t1 MTR_6g053240 27.848 316 175 12 10 294 28 321 5.96e-21 93.6
MS.gene58239.t1 MTR_3g009260 29.123 285 186 8 10 289 41 314 6.80e-21 93.2
MS.gene58239.t1 MTR_3g464500 28.822 399 218 19 4 353 21 402 8.02e-21 93.2
MS.gene58239.t1 MTR_2g047832 27.964 329 185 14 4 296 23 335 1.06e-20 93.2
MS.gene58239.t1 MTR_4g031770 28.197 305 181 13 10 294 4 290 1.10e-20 92.4
MS.gene58239.t1 MTR_4g129160 28.219 365 196 16 4 311 1 356 1.65e-20 92.0
MS.gene58239.t1 MTR_7g445890 24.936 389 225 15 10 353 16 382 1.80e-20 92.0
MS.gene58239.t1 MTR_3g030250 27.869 305 170 13 10 294 37 311 2.04e-20 91.7
MS.gene58239.t1 MTR_7g055977 25.806 403 225 18 4 354 1 381 2.08e-20 91.7
MS.gene58239.t1 MTR_6g090180 27.415 383 223 14 2 335 37 413 2.11e-20 92.4
MS.gene58239.t1 MTR_8g062660 27.245 323 187 11 1 294 13 316 2.73e-20 92.8
MS.gene58239.t1 MTR_7g062100 27.132 387 225 18 10 353 24 396 2.86e-20 91.7
MS.gene58239.t1 MTR_3g083010 27.342 395 233 17 10 355 6 395 2.88e-20 91.7
MS.gene58239.t1 MTR_7g056760 27.684 354 196 15 8 314 21 361 2.93e-20 91.7
MS.gene58239.t1 MTR_1g088120 28.060 335 189 14 1 293 1 325 4.07e-20 91.3
MS.gene58239.t1 MTR_3g024150 30.693 303 166 16 13 294 38 317 4.47e-20 90.9
MS.gene58239.t1 MTR_7g013590 33.443 305 162 17 13 294 39 325 5.26e-20 90.9
MS.gene58239.t1 MTR_4g033495 26.196 397 227 17 10 356 27 407 5.30e-20 91.3
MS.gene58239.t1 MTR_0128s0070 27.577 388 222 16 10 352 22 395 5.48e-20 90.9
MS.gene58239.t1 MTR_3g010520 29.195 298 167 12 10 294 25 291 6.37e-20 90.1
MS.gene58239.t1 MTR_3g006500 27.346 373 222 15 10 353 17 369 7.16e-20 90.1
MS.gene58239.t1 MTR_4g129190 26.142 394 233 15 10 354 6 390 7.31e-20 90.5
MS.gene58239.t1 MTR_1g056710 29.836 305 175 15 10 294 34 319 8.22e-20 90.1
MS.gene58239.t1 MTR_6g065980 29.897 291 169 14 10 289 16 282 9.83e-20 89.7
MS.gene58239.t1 MTR_2g078900 28.620 297 185 11 10 294 33 314 1.19e-19 89.4
MS.gene58239.t1 MTR_2g021210 27.577 359 227 14 10 353 84 424 1.25e-19 90.1
MS.gene58239.t1 MTR_3g024110 28.274 336 208 13 10 328 101 420 1.31e-19 90.1
MS.gene58239.t1 MTR_7g056003 28.852 357 182 16 13 314 18 357 1.36e-19 89.7
MS.gene58239.t1 MTR_2g025420 24.876 402 229 15 10 353 6 392 1.57e-19 89.7
MS.gene58239.t1 MTR_3g072470 30.631 333 162 16 10 293 19 331 1.64e-19 89.7
MS.gene58239.t1 MTR_3g010970 28.496 379 195 18 13 353 51 391 1.91e-19 89.0
MS.gene58239.t1 MTR_6g016285 26.471 408 229 16 8 353 19 417 2.39e-19 89.4
MS.gene58239.t1 MTR_5g007610 29.355 310 179 13 10 293 41 336 2.49e-19 89.0
MS.gene58239.t1 MTR_2g078850 30.565 301 171 15 13 294 33 314 2.54e-19 88.6
MS.gene58239.t1 MTR_2g028140 25.532 329 188 13 10 293 5 321 2.67e-19 89.0
MS.gene58239.t1 MTR_0760s0010 30.690 290 173 13 15 294 52 323 3.08e-19 88.6
MS.gene58239.t1 MTR_6g027910 28.533 375 222 18 13 353 12 374 3.17e-19 88.2
MS.gene58239.t1 MTR_2g461450 27.891 294 186 8 10 293 18 295 3.39e-19 88.2
MS.gene58239.t1 MTR_3g010920 27.740 292 180 11 10 294 44 311 3.61e-19 88.2
MS.gene58239.t1 MTR_3g010870 28.239 301 179 11 10 294 37 316 3.80e-19 88.2
MS.gene58239.t1 MTR_7g007300 27.200 375 216 18 7 353 100 445 3.94e-19 88.6
MS.gene58239.t1 MTR_7g066000 28.076 317 190 13 8 293 23 332 3.94e-19 88.2
MS.gene58239.t1 MTR_2g043400 27.960 397 216 18 8 349 21 402 4.64e-19 88.2
MS.gene58239.t1 MTR_5g069930 25.000 368 218 17 8 333 4 355 4.78e-19 87.8
MS.gene58239.t1 MTR_7g066850 25.686 401 228 17 10 356 23 407 4.82e-19 88.6
MS.gene58239.t1 MTR_0649s0020 28.302 371 203 20 10 333 11 365 4.93e-19 87.8
MS.gene58239.t1 MTR_2g104340 25.964 389 240 13 9 356 13 394 6.17e-19 87.8
MS.gene58239.t1 MTR_7g060960 26.923 312 171 10 8 299 30 304 7.55e-19 87.0
MS.gene58239.t1 MTR_0831s0010 24.227 388 245 12 3 354 43 417 7.63e-19 87.8
MS.gene58239.t1 MTR_7g028660 28.267 329 184 12 8 300 9 321 9.37e-19 87.0
MS.gene58239.t1 MTR_7g066030 27.157 394 235 16 6 354 17 403 9.41e-19 87.0
MS.gene58239.t1 MTR_3g010620 28.618 304 172 12 8 294 31 306 1.01e-18 87.0
MS.gene58239.t1 MTR_7g056390 28.955 335 166 14 10 293 18 331 1.03e-18 87.0
MS.gene58239.t1 MTR_6g007135 26.797 306 193 10 10 294 26 321 1.17e-18 86.7
MS.gene58239.t1 MTR_2g043410 26.768 396 214 16 8 345 20 397 1.41e-18 86.7
MS.gene58239.t1 MTR_3g036335 27.797 295 185 10 10 289 41 322 1.75e-18 86.3
MS.gene58239.t1 MTR_8g099460 27.010 311 186 12 10 293 5 301 1.78e-18 86.3
MS.gene58239.t1 MTR_2g026010 26.159 302 197 10 10 293 4 297 1.80e-18 86.3
MS.gene58239.t1 MTR_2g047892 25.946 370 208 17 10 332 22 372 2.02e-18 86.3
MS.gene58239.t1 MTR_3g011100 29.967 307 176 12 10 293 235 525 2.05e-18 87.0
MS.gene58239.t1 MTR_0464s0020 27.020 396 214 17 8 336 21 408 2.22e-18 86.3
MS.gene58239.t1 MTR_2g021050 27.564 312 167 15 10 293 5 285 2.60e-18 85.9
MS.gene58239.t1 MTR_7g062060 25.495 404 229 18 9 354 11 400 2.78e-18 85.9
MS.gene58239.t1 MTR_6g053260 27.974 311 176 12 10 294 337 625 3.24e-18 86.7
MS.gene58239.t1 MTR_4g023430 55.952 84 31 2 1 80 32 113 3.55e-18 82.8
MS.gene58239.t1 MTR_4g023430 43.269 104 53 2 264 361 119 222 2.85e-15 74.7
MS.gene58239.t1 MTR_1g055375 28.232 379 215 20 13 353 7 366 3.64e-18 85.1
MS.gene58239.t1 MTR_7g052670 24.755 408 243 17 8 353 19 424 4.05e-18 85.5
MS.gene58239.t1 MTR_3g006570 27.564 312 173 12 10 294 21 306 4.07e-18 85.1
MS.gene58239.t1 MTR_1g061330 24.934 377 237 13 10 359 4 361 4.25e-18 85.1
MS.gene58239.t1 MTR_4g014370 23.529 408 242 15 9 356 10 407 4.54e-18 85.1
MS.gene58239.t1 MTR_2g021252 25.278 360 227 13 13 354 50 385 4.76e-18 85.1
MS.gene58239.t1 MTR_6g092560 24.495 396 243 16 8 355 10 397 5.61e-18 85.1
MS.gene58239.t1 MTR_5g057643 30.137 219 122 9 10 210 46 251 8.31e-18 82.8
MS.gene58239.t1 MTR_5g046300 28.328 293 180 12 10 289 4 279 8.53e-18 84.0
MS.gene58239.t1 MTR_5g046290 28.328 293 180 12 10 289 4 279 8.53e-18 84.0
MS.gene58239.t1 MTR_5g069390 25.183 409 237 15 9 361 25 420 9.25e-18 84.7
MS.gene58239.t1 MTR_2g024100 27.187 320 195 12 12 302 9 319 1.15e-17 84.0
MS.gene58239.t1 MTR_3g010590 28.053 303 170 13 10 294 39 311 1.32e-17 83.6
MS.gene58239.t1 MTR_3g024040 29.720 286 173 12 17 293 38 304 1.40e-17 83.6
MS.gene58239.t1 MTR_2g025960 26.937 271 155 14 103 336 5 269 1.40e-17 82.8
MS.gene58239.t1 MTR_5g048160 24.812 399 232 17 10 354 4 388 1.50e-17 83.6
MS.gene58239.t1 MTR_7g061060 25.627 359 190 14 7 314 10 342 1.52e-17 83.6
MS.gene58239.t1 MTR_3g030330 28.571 294 185 10 10 294 20 297 1.57e-17 83.2
MS.gene58239.t1 MTR_7g055830 26.010 396 195 16 10 356 13 359 1.71e-17 83.2
MS.gene58239.t1 MTR_5g037680 25.000 388 235 17 9 353 7 381 1.82e-17 83.6
MS.gene58239.t1 MTR_7g067680 26.846 298 175 9 10 294 49 316 1.96e-17 83.2
MS.gene58239.t1 MTR_4g030110 26.190 378 220 16 1 338 21 379 2.01e-17 83.2
MS.gene58239.t1 MTR_7g077970 27.950 322 192 11 10 293 7 326 2.02e-17 83.6
MS.gene58239.t1 MTR_4g080200 25.538 372 225 13 8 354 1 345 2.48e-17 82.4
MS.gene58239.t1 MTR_1g442850 27.368 380 201 18 9 335 4 361 2.98e-17 82.4
MS.gene58239.t1 MTR_6g055210 25.917 409 229 18 9 353 21 419 3.80e-17 82.8
MS.gene58239.t1 MTR_4g117550 25.917 409 189 17 9 356 16 371 4.14e-17 82.0
MS.gene58239.t1 MTR_7g056200 25.063 395 215 15 7 353 20 381 4.66e-17 82.0
MS.gene58239.t1 MTR_5g046260 27.018 285 164 12 10 289 4 249 4.94e-17 80.9
MS.gene58239.t1 MTR_4g030980 24.088 411 219 13 10 340 15 412 5.07e-17 82.4
MS.gene58239.t1 MTR_7g055987 26.866 335 188 16 13 312 23 335 5.82e-17 81.6
MS.gene58239.t1 MTR_3g010430 26.415 318 171 13 10 294 36 323 6.05e-17 82.0
MS.gene58239.t1 MTR_7g035295 23.545 378 205 15 10 336 16 360 7.31e-17 81.6
MS.gene58239.t1 MTR_3g007300 28.808 302 149 12 10 293 49 302 7.56e-17 81.3
MS.gene58239.t1 MTR_0054s0090 25.610 410 238 18 2 356 7 404 7.81e-17 81.6
MS.gene58239.t1 MTR_2g437110 24.685 397 224 17 8 353 20 392 8.47e-17 82.0
MS.gene58239.t1 MTR_4g013175 25.304 411 228 18 1 342 1 401 8.53e-17 81.6
MS.gene58239.t1 MTR_2g022000 24.634 410 244 14 9 361 15 416 9.63e-17 81.6
MS.gene58239.t1 MTR_7g061050 27.019 322 180 12 7 293 10 311 1.03e-16 80.9
MS.gene58239.t1 MTR_6g017305 27.341 267 158 12 120 353 18 281 1.17e-16 79.7
MS.gene58239.t1 MTR_0267s0050 26.076 395 227 16 13 358 9 387 1.26e-16 80.9
MS.gene58239.t1 MTR_4g013185 24.878 410 235 15 1 344 1 403 1.33e-16 80.9
MS.gene58239.t1 MTR_0128s0010 27.044 318 189 13 3 289 14 319 1.35e-16 80.9
MS.gene58239.t1 MTR_3g030350 27.491 291 187 11 10 289 35 312 1.70e-16 80.5
MS.gene58239.t1 MTR_6g004660 28.571 308 179 10 10 289 16 310 1.88e-16 80.1
MS.gene58239.t1 MTR_1g007450 25.824 364 226 12 1 324 1 360 1.90e-16 80.5
MS.gene58239.t1 MTR_7g091630 24.090 357 220 14 3 314 25 375 2.21e-16 80.5
MS.gene58239.t1 MTR_4g011660 23.659 410 236 16 10 353 19 417 2.55e-16 80.1
MS.gene58239.t1 MTR_7g056170 26.969 419 215 19 1 353 66 459 2.87e-16 80.1
MS.gene58239.t1 MTR_4g102410 25.432 405 247 17 1 356 50 448 3.60e-16 79.7
MS.gene58239.t1 MTR_7g057270 27.445 317 193 12 10 293 26 338 4.20e-16 79.3
MS.gene58239.t1 MTR_4g006270 27.365 296 166 13 10 287 4 268 6.01e-16 79.0
MS.gene58239.t1 MTR_3g437520 25.758 396 216 17 8 336 21 405 6.79e-16 79.0
MS.gene58239.t1 MTR_7g056710 26.371 383 223 18 9 352 17 379 7.60e-16 78.6
MS.gene58239.t1 MTR_5g023570 41.346 104 59 1 9 112 36 137 7.62e-16 74.3
MS.gene58239.t1 MTR_3g009250 30.288 208 134 5 13 216 44 244 9.08e-16 76.3
MS.gene58239.t1 MTR_0054s0100 25.485 412 238 18 2 356 7 406 9.42e-16 78.2
MS.gene58239.t1 MTR_0242s0060 28.221 326 186 15 8 293 7 324 1.06e-15 78.2
MS.gene58239.t1 MTR_0242s0040 28.221 326 186 15 8 293 7 324 1.06e-15 78.2
MS.gene58239.t1 MTR_4g030760 25.130 386 217 15 10 352 73 429 1.07e-15 78.2
MS.gene58239.t1 MTR_7g056260 28.349 321 178 15 8 293 12 315 1.08e-15 77.4
MS.gene58239.t1 MTR_7g066010 24.552 391 216 14 6 354 17 370 1.14e-15 77.8
MS.gene58239.t1 MTR_7g078040 28.274 336 182 14 10 293 9 337 1.36e-15 78.2
MS.gene58239.t1 MTR_1g007410 24.118 340 187 11 9 295 21 342 1.51e-15 77.8
MS.gene58239.t1 MTR_7g061010 28.238 386 217 16 8 352 20 386 1.91e-15 77.4
MS.gene58239.t1 MTR_1g009110 27.123 365 222 18 2 337 7 356 2.06e-15 77.0
MS.gene58239.t1 MTR_5g096630 22.302 417 252 11 1 356 7 412 2.51e-15 77.0
MS.gene58239.t1 MTR_7g078840 27.507 349 191 16 1 293 1 343 2.54e-15 77.0
MS.gene58239.t1 MTR_7g061090 25.994 327 190 12 8 293 20 335 2.63e-15 77.0
MS.gene58239.t1 MTR_8g063440 23.716 409 227 17 1 354 1 379 2.72e-15 76.6
MS.gene58239.t1 MTR_7g050520 26.966 356 207 16 8 326 20 359 3.98e-15 76.3
MS.gene58239.t1 MTR_7g077990 27.500 320 168 14 10 289 17 312 4.10e-15 76.3
MS.gene58239.t1 MTR_7g066060 24.297 391 244 14 9 353 22 406 4.93e-15 76.6
MS.gene58239.t1 MTR_3g011650 31.163 215 124 8 13 216 82 283 5.34e-15 74.7
MS.gene58239.t1 MTR_5g092850 24.265 408 223 20 9 354 15 398 6.43e-15 75.9
MS.gene58239.t1 MTR_3g023940 26.630 368 228 15 10 353 34 383 6.75e-15 75.5
MS.gene58239.t1 MTR_4g122840 38.519 135 46 4 230 361 164 264 7.16e-15 74.3
MS.gene58239.t1 MTR_3g011120 26.706 337 199 15 9 313 13 333 7.51e-15 75.5
MS.gene58239.t1 MTR_8g064890 24.112 394 231 17 9 356 15 386 7.53e-15 75.5
MS.gene58239.t1 MTR_4g030090 25.806 310 192 10 10 289 14 315 7.61e-15 75.5
MS.gene58239.t1 MTR_7g017040 23.724 392 241 15 9 354 15 394 7.75e-15 75.5
MS.gene58239.t1 MTR_5g097350 25.532 376 223 17 19 354 25 383 8.28e-15 75.5
MS.gene58239.t1 MTR_2g021950 22.656 384 254 10 9 354 15 393 1.16e-14 75.1
MS.gene58239.t1 MTR_7g050480 26.611 357 207 16 8 326 20 359 1.25e-14 74.7
MS.gene58239.t1 MTR_8g046310 24.274 379 237 14 9 355 15 375 1.33e-14 74.7
MS.gene58239.t1 MTR_5g057040 32.948 173 86 8 10 164 46 206 1.62e-14 75.5
MS.gene58239.t1 MTR_4g024890 22.938 388 244 13 9 353 9 384 1.78e-14 74.3
MS.gene58239.t1 MTR_0097s0030 24.731 372 216 16 10 340 14 362 2.06e-14 74.3
MS.gene58239.t1 MTR_2g047240 24.731 372 216 16 10 340 14 362 2.06e-14 74.3
MS.gene58239.t1 MTR_1g023400 25.613 367 227 19 13 354 6 351 2.20e-14 73.9
MS.gene58239.t1 MTR_7g079160 25.490 408 216 17 8 337 6 403 2.64e-14 74.3
MS.gene58239.t1 MTR_7g022600 26.341 410 225 18 10 353 23 421 3.38e-14 73.6
MS.gene58239.t1 MTR_1g055055 25.000 300 181 10 10 295 26 295 4.35e-14 72.8
MS.gene58239.t1 MTR_7g079640 25.668 374 225 15 9 349 12 365 4.40e-14 73.2
MS.gene58239.t1 MTR_3g024130 28.899 218 123 10 93 293 48 250 4.77e-14 72.4
MS.gene58239.t1 MTR_2g047200 24.933 373 221 19 10 338 20 377 4.84e-14 73.2
MS.gene58239.t1 MTR_5g097330 24.877 406 242 16 1 354 5 399 5.21e-14 73.2
MS.gene58239.t1 MTR_7g091640 25.926 324 198 17 3 293 28 342 5.24e-14 72.8
MS.gene58239.t1 MTR_2g031700 27.966 236 140 7 10 231 6 225 5.89e-14 72.0
MS.gene58239.t1 MTR_5g096900 28.082 292 160 11 9 263 11 289 6.92e-14 72.0
MS.gene58239.t1 MTR_1g055200 52.055 73 28 2 102 173 5 71 8.54e-14 67.4
MS.gene58239.t1 MTR_6g048140 28.972 321 161 16 10 294 39 328 8.82e-14 72.4
MS.gene58239.t1 MTR_6g478230 23.291 395 241 16 9 356 26 405 9.11e-14 72.4
MS.gene58239.t1 MTR_7g056797 26.899 316 184 13 8 287 21 325 9.90e-14 72.4
MS.gene58239.t1 MTR_3g058440 30.736 231 122 9 10 215 35 252 1.25e-13 71.2
MS.gene58239.t1 MTR_5g059430 23.671 414 236 19 9 356 25 424 1.80e-13 71.6
MS.gene58239.t1 MTR_3g096250 29.492 295 149 12 10 294 47 292 1.83e-13 71.2
MS.gene58239.t1 MTR_7g077070 26.331 338 191 15 10 297 16 345 2.17e-13 71.2
MS.gene58239.t1 MTR_5g008530 62.500 48 18 0 8 55 16 63 2.28e-13 65.1
MS.gene58239.t1 MTR_1g071010 25.000 384 234 17 11 353 16 386 2.34e-13 70.9
MS.gene58239.t1 MTR_4g028510 24.000 400 236 19 10 356 16 400 2.47e-13 71.2
MS.gene58239.t1 MTR_7g066840 25.000 404 230 19 5 356 18 400 2.61e-13 70.9
MS.gene58239.t1 MTR_1g097370 29.012 162 104 4 149 302 135 293 2.73e-13 71.2
MS.gene58239.t1 MTR_0129s0070 25.000 392 227 16 12 354 19 392 2.75e-13 70.9
MS.gene58239.t1 MTR_5g009060 29.290 338 165 15 10 293 25 342 3.18e-13 70.9
MS.gene58239.t1 MTR_7g056737 27.184 309 190 12 8 293 20 316 3.38e-13 70.5
MS.gene58239.t1 MTR_6g017270 28.788 198 119 8 10 188 9 203 4.06e-13 70.1
MS.gene58239.t1 MTR_7g052150 26.183 317 194 12 8 297 20 323 4.15e-13 70.5
MS.gene58239.t1 MTR_8g013005 59.649 57 21 1 305 359 1 57 4.48e-13 63.9
MS.gene58239.t1 MTR_8g066440 27.273 330 177 16 11 293 24 337 4.58e-13 70.1
MS.gene58239.t1 MTR_5g068040 27.129 317 173 12 8 293 14 303 5.75e-13 69.7
MS.gene58239.t1 MTR_2g010950 24.860 358 226 12 10 331 20 370 6.14e-13 69.7
MS.gene58239.t1 MTR_3g058470 28.896 308 164 12 10 298 37 308 6.49e-13 69.7
MS.gene58239.t1 MTR_4g028750 26.190 336 191 14 1 289 4 329 7.21e-13 69.7
MS.gene58239.t1 MTR_1g037540 25.840 387 219 19 10 339 5 380 8.53e-13 69.3
MS.gene58239.t1 MTR_2g104280 23.951 405 253 12 1 356 5 403 8.68e-13 69.3
MS.gene58239.t1 MTR_4g028660 23.136 389 248 14 9 354 15 395 8.80e-13 69.3
MS.gene58239.t1 MTR_4g027450 23.136 389 248 14 9 354 15 395 8.80e-13 69.3
MS.gene58239.t1 MTR_2g010920 25.587 383 212 19 10 331 20 390 9.33e-13 69.3
MS.gene58239.t1 MTR_7g056717 27.895 380 212 21 15 353 27 385 1.02e-12 68.9
MS.gene58239.t1 MTR_7g009265 24.845 322 186 15 84 354 8 324 1.90e-12 67.8
MS.gene58239.t1 MTR_1g112930 27.425 299 185 13 10 294 25 305 3.12e-12 67.4
MS.gene58239.t1 MTR_5g097820 26.721 247 146 8 2 217 15 257 3.85e-12 66.2
MS.gene58239.t1 MTR_6g017295 25.540 278 152 13 85 314 19 289 6.10e-12 67.0
MS.gene58239.t1 MTR_5g064700 22.830 311 187 14 93 356 62 366 6.47e-12 66.6
MS.gene58239.t1 MTR_3g058480 29.845 258 144 11 10 243 39 283 6.60e-12 66.2
MS.gene58239.t1 MTR_5g056990 30.303 165 102 4 134 294 21 176 6.97e-12 65.1
MS.gene58239.t1 MTR_6g013270 26.433 314 189 14 5 294 24 319 7.96e-12 66.2
MS.gene58239.t1 MTR_3g080370 25.954 393 218 17 24 353 35 417 8.54e-12 66.6
MS.gene58239.t1 MTR_2g033410 25.893 336 192 15 11 316 10 318 1.01e-11 65.9
MS.gene58239.t1 MTR_1g055145 41.071 112 53 6 205 312 130 232 1.31e-11 65.1
MS.gene58239.t1 MTR_1g055145 40.816 98 49 3 13 104 36 130 9.91e-11 62.4
MS.gene58239.t1 MTR_7g050490 30.808 198 104 8 8 187 6 188 1.35e-11 63.2
MS.gene58239.t1 MTR_8g467670 24.346 382 228 14 9 351 13 372 1.35e-11 65.9
MS.gene58239.t1 MTR_0627s0010 25.138 362 201 14 10 314 38 386 1.88e-11 65.5
MS.gene58239.t1 MTR_4g028680 24.561 399 235 17 9 356 15 398 2.43e-11 65.1
MS.gene58239.t1 MTR_6g034830 36.607 112 57 2 3 112 13 112 2.91e-11 60.5
MS.gene58239.t1 MTR_1g029650 21.374 393 253 14 10 358 8 388 3.06e-11 64.7
MS.gene58239.t1 MTR_6g048120 23.585 318 188 10 10 294 36 331 3.34e-11 64.7
MS.gene58239.t1 MTR_7g069550 24.173 393 231 17 10 350 14 391 3.87e-11 64.3
MS.gene58239.t1 MTR_2g078870 28.977 176 109 8 119 294 78 237 3.96e-11 63.9
MS.gene58239.t1 MTR_2g010900 24.843 318 205 11 28 314 1 315 4.60e-11 63.9
MS.gene58239.t1 MTR_6g046320 25.507 345 181 15 10 289 39 372 4.71e-11 64.3
MS.gene58239.t1 MTR_3g030320 26.882 186 126 5 119 304 62 237 4.82e-11 63.5
MS.gene58239.t1 MTR_3g010870 28.636 220 123 9 10 213 37 238 5.92e-11 63.2
MS.gene58239.t1 MTR_5g027370 23.171 328 211 12 10 306 29 346 8.25e-11 63.5
MS.gene58239.t1 MTR_5g027330 23.171 328 211 12 10 306 40 357 8.44e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58239.t1 AT3G06240 28.750 400 221 16 6 353 32 419 8.14e-29 116
MS.gene58239.t1 AT3G23880 28.571 343 210 14 10 334 14 339 1.37e-23 100
MS.gene58239.t1 AT5G49610 29.003 331 183 16 5 308 3 308 5.72e-20 90.5
MS.gene58239.t1 AT4G12560 27.457 346 207 14 10 327 4 333 6.47e-20 90.9
MS.gene58239.t1 AT4G12560 27.457 346 207 14 10 327 4 333 6.47e-20 90.9
MS.gene58239.t1 AT4G12560 27.457 346 207 14 10 327 4 333 6.47e-20 90.9
MS.gene58239.t1 AT3G10430 29.137 278 150 13 10 267 5 255 1.38e-16 80.5
MS.gene58239.t1 AT3G07870 25.321 312 194 10 10 293 28 328 1.29e-15 78.2
MS.gene58239.t1 AT3G16590 28.125 288 174 12 10 279 5 277 1.25e-14 74.7
MS.gene58239.t1 AT3G08750 28.214 280 161 15 10 276 12 264 2.60e-13 70.9
MS.gene58239.t1 AT4G04690 27.854 219 128 8 10 216 11 211 5.40e-13 70.1
MS.gene58239.t1 AT4G21240 24.359 312 202 9 10 305 36 329 7.65e-13 69.7
MS.gene58239.t1 AT4G19940 24.576 354 211 13 10 326 35 369 2.30e-12 68.2
MS.gene58239.t1 AT1G12870 22.481 387 240 18 10 351 33 404 3.35e-12 67.8
MS.gene58239.t1 AT1G33530 25.685 292 185 12 10 290 97 367 3.65e-12 67.8
MS.gene58239.t1 AT3G22650 23.750 320 192 15 6 300 5 297 8.92e-12 66.2
MS.gene58239.t1 AT3G22650 23.438 320 182 15 6 300 5 286 1.44e-11 65.5
MS.gene58239.t1 AT1G30790 28.897 263 159 10 3 244 2 257 1.80e-11 65.5
MS.gene58239.t1 AT3G17490 24.172 302 185 12 9 288 5 284 2.17e-11 65.1
MS.gene58239.t1 AT1G13200 21.696 401 247 17 10 353 43 433 2.89e-11 65.1

Find 86 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGCCTTTGATTTAA+TGG 0.094561 8.4:-64251780 MS.gene58239:CDS
TACCATCTTTATGAAATTAA+AGG 0.194448 8.4:-64252169 MS.gene58239:CDS
ATTCCTCTTCCAGATGATTT+TGG 0.212456 8.4:-64251740 MS.gene58239:CDS
ATAATCCGGCACTTGAAATA+TGG 0.213121 8.4:-64251649 MS.gene58239:CDS
GGCTATAGTCCTGTGTATTA+TGG 0.213134 8.4:-64251719 MS.gene58239:CDS
TATTATGGTTTGTGGGTATT+TGG 0.243259 8.4:-64251704 MS.gene58239:CDS
CGATGTCAGCTATATGGTTT+TGG 0.284001 8.4:-64252025 MS.gene58239:CDS
TCGATGGTATGCATGTAATT+TGG 0.287079 8.4:+64252045 None:intergenic
GAAATACCTTTGTCCCCTTA+TGG 0.287603 8.4:-64252070 MS.gene58239:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.288501 8.4:-64251685 MS.gene58239:CDS
AAAGCAGGATCATTCTTTAA+TGG 0.307314 8.4:-64251851 MS.gene58239:CDS
TGAAACAGAATCATGGTTAA+TGG 0.320662 8.4:+64252222 None:intergenic
AAGCAGGATCATTCTTTAAT+GGG 0.325706 8.4:-64251850 MS.gene58239:CDS
TCAAGAACTCCACCTCTTGA+TGG 0.326957 8.4:-64252271 MS.gene58239:CDS
TACCATCGATGTCAGCTATA+TGG 0.341904 8.4:-64252031 MS.gene58239:CDS
AACCTTTAATTTCATAAAGA+TGG 0.347582 8.4:+64252167 None:intergenic
TTCTCATTATCATAGTTTAC+CGG 0.368207 8.4:-64251810 MS.gene58239:CDS
TCTTTAATGGGGCTATTCAT+TGG 0.381874 8.4:-64251838 MS.gene58239:CDS
TAACCATGATTCTGTTTCAC+TGG 0.404123 8.4:-64252218 MS.gene58239:CDS
TAATGGGGCTATTCATTGGT+TGG 0.427301 8.4:-64251834 MS.gene58239:CDS
ACCTCGCTGGCAACCTCAGC+AGG 0.429055 8.4:+64252401 None:intergenic
GTCCTGTGTATTATGGTTTG+TGG 0.436268 8.4:-64251712 MS.gene58239:CDS
GGACTATAGCCAAAATCATC+TGG 0.441625 8.4:+64251731 None:intergenic
GCATGTAATTTGGAACCATA+AGG 0.442244 8.4:+64252055 None:intergenic
AATACAAACTGCAATCATCT+TGG 0.444562 8.4:-64251616 MS.gene58239:CDS
TTCATAAAGATGGTAATGTC+GGG 0.448056 8.4:+64252177 None:intergenic
TAATCCGGCACTTGAAATAT+GGG 0.454488 8.4:-64251648 MS.gene58239:CDS
ATTGGAACTGATGGTGGTAA+TGG 0.460060 8.4:-64251515 MS.gene58239:CDS
CTTGTAATTCCTATTGACAT+TGG 0.460167 8.4:-64251584 MS.gene58239:CDS
TCCTGTGTATTATGGTTTGT+GGG 0.461492 8.4:-64251711 MS.gene58239:CDS
CATGTAATTTGGAACCATAA+GGG 0.467753 8.4:+64252056 None:intergenic
TCAAATTCGTTTGTAAGTCA+TGG 0.470890 8.4:-64252366 MS.gene58239:CDS
ATCGCCCATATTTCAAGTGC+CGG 0.478471 8.4:+64251644 None:intergenic
TTTCCTTTCCATTAAATCAA+AGG 0.478785 8.4:+64251772 None:intergenic
TTTCATAAAGATGGTAATGT+CGG 0.482897 8.4:+64252176 None:intergenic
GTCGGGGAAGTAGAAAAGTA+TGG 0.483592 8.4:+64252194 None:intergenic
TTGGTGAAGTATAATAATAA+AGG 0.488795 8.4:-64251491 MS.gene58239:CDS
TGATGACACAGATGGACAAA+AGG 0.498002 8.4:+64251961 None:intergenic
CCGGTCAAGAGATGATTACT+TGG 0.500070 8.4:-64251996 MS.gene58239:CDS
TATTTCTTTGTGAAATCTAG+TGG 0.503633 8.4:+64252087 None:intergenic
GCCAGGACTTATCGTAAAGC+AGG 0.512614 8.4:-64251866 MS.gene58239:CDS
ACATCACTTATTTGAATGCC+AGG 0.517766 8.4:-64251883 MS.gene58239:CDS
AAATTAAAGGTTCATGCAGA+GGG 0.521334 8.4:-64252156 MS.gene58239:CDS
GTATCTCAAAATGAATCTAA+AGG 0.527253 8.4:-64251456 MS.gene58239:CDS
TCTTTGTGAAATCTAGTGGA+TGG 0.529306 8.4:+64252091 None:intergenic
GAGTCTCTACTTTCACTCCC+TGG 0.529430 8.4:-64251410 MS.gene58239:CDS
TTGCCTTTGATTTAATGGAA+AGG 0.533360 8.4:-64251775 MS.gene58239:CDS
AATACGTGGAATAAAATTGA+AGG 0.536872 8.4:-64251911 MS.gene58239:CDS
TAAACTACCTCACGATCACC+AGG 0.539411 8.4:+64251392 None:intergenic
TGAAATTAACACAATTCTTG+CGG 0.539680 8.4:+64252291 None:intergenic
GTCAAGAGATGATTACTTGG+TGG 0.541832 8.4:-64251993 MS.gene58239:CDS
GTTGGAGAAACCTCTACGTA+TGG 0.549046 8.4:-64252117 MS.gene58239:CDS
TAGCCAAAATCATCTGGAAG+AGG 0.552126 8.4:+64251737 None:intergenic
TCCTGCTTTACGATAAGTCC+TGG 0.554004 8.4:+64251865 None:intergenic
TCTAAATATGATGACACAGA+TGG 0.560379 8.4:+64251953 None:intergenic
GAAATTAAAGGTTCATGCAG+AGG 0.568478 8.4:-64252157 MS.gene58239:CDS
TCCTGCTGAGGTTGCCAGCG+AGG 0.573172 8.4:-64252402 MS.gene58239:CDS
ATGTAATTTGGAACCATAAG+GGG 0.575504 8.4:+64252057 None:intergenic
GGTGATATTATTGGAACTGA+TGG 0.578976 8.4:-64251524 MS.gene58239:CDS
CCAAGTAATCATCTCTTGAC+CGG 0.585969 8.4:+64251996 None:intergenic
AACTGATGGTGGTAATGGAT+TGG 0.587821 8.4:-64251510 MS.gene58239:CDS
GATATTATTGGAACTGATGG+TGG 0.590443 8.4:-64251521 MS.gene58239:CDS
ATTTGAATGATTAACTCAGA+AGG 0.590960 8.4:+64252424 None:intergenic
GAATCTAAAGGCATCTGAAG+TGG 0.593932 8.4:-64251444 MS.gene58239:CDS
GGTCCAGTGAAACAGAATCA+TGG 0.595041 8.4:+64252215 None:intergenic
AGCAGGATCATTCTTTAATG+GGG 0.603149 8.4:-64251849 MS.gene58239:CDS
AAGTAGAGACTCTTTATACA+TGG 0.611129 8.4:+64251421 None:intergenic
TTGGAACCATAAGGGGACAA+AGG 0.616353 8.4:+64252064 None:intergenic
TTCACTCCCTGGTGATCGTG+AGG 0.618996 8.4:-64251399 MS.gene58239:CDS
AAGGCAACAATAACTTCCAC+CGG 0.621007 8.4:+64251791 None:intergenic
TAATCATTCAAATCCTGCTG+AGG 0.622857 8.4:-64252414 MS.gene58239:CDS
AACCATATAGCTGACATCGA+TGG 0.633533 8.4:+64252029 None:intergenic
TCATTATCATAGTTTACCGG+TGG 0.635787 8.4:-64251807 MS.gene58239:CDS
AATTAACACAATTCTTGCGG+CGG 0.636044 8.4:+64252294 None:intergenic
AAATGTAAAAGAGACCTCGC+TGG 0.641330 8.4:+64252388 None:intergenic
CTATTGACATTGGAAAACCT+AGG 0.643525 8.4:-64251574 MS.gene58239:CDS
ACCCACAAACCATAATACAC+AGG 0.646047 8.4:+64251710 None:intergenic
TCATAAAGATGGTAATGTCG+GGG 0.646720 8.4:+64252178 None:intergenic
ATAGAGCGAATTCCATCAAG+AGG 0.648628 8.4:+64252259 None:intergenic
GAGCGAATTCCATCAAGAGG+TGG 0.656789 8.4:+64252262 None:intergenic
GCATTCAAATAAGTGATGTG+TGG 0.669083 8.4:+64251887 None:intergenic
TGGATGGATTCCATACGTAG+AGG 0.669122 8.4:+64252107 None:intergenic
TCTCGATGAGAGATAATACG+TGG 0.669859 8.4:-64251925 MS.gene58239:CDS
ACATGCGAATTTGCAAAGTG+AGG 0.671122 8.4:+64252325 None:intergenic
AGTATAATAATAAAGGACAA+CGG 0.711600 8.4:-64251484 MS.gene58239:CDS
AAACTACCTCACGATCACCA+GGG 0.735207 8.4:+64251393 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTATAATAATAAAGGACAA+CGG - chr8.4:64252361-64252380 MS.gene58239:CDS 20.0%
!! TACCATCTTTATGAAATTAA+AGG - chr8.4:64251676-64251695 MS.gene58239:CDS 20.0%
!! TTGGTGAAGTATAATAATAA+AGG - chr8.4:64252354-64252373 MS.gene58239:CDS 20.0%
!!! AACCTTTAATTTCATAAAGA+TGG + chr8.4:64251681-64251700 None:intergenic 20.0%
!!! GAATATGAATTTTCATAATC+CGG - chr8.4:64252182-64252201 MS.gene58239:CDS 20.0%
! AATACGTGGAATAAAATTGA+AGG - chr8.4:64251934-64251953 MS.gene58239:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG - chr8.4:64252312-64252331 MS.gene58239:CDS 25.0%
! ATTTGAATGATTAACTCAGA+AGG + chr8.4:64251424-64251443 None:intergenic 25.0%
! GTATCTCAAAATGAATCTAA+AGG - chr8.4:64252389-64252408 MS.gene58239:CDS 25.0%
! TATTTCTTTGTGAAATCTAG+TGG + chr8.4:64251761-64251780 None:intergenic 25.0%
! TGAAATTAACACAATTCTTG+CGG + chr8.4:64251557-64251576 None:intergenic 25.0%
! TTCTCATTATCATAGTTTAC+CGG - chr8.4:64252035-64252054 MS.gene58239:CDS 25.0%
! TTTCCTTTCCATTAAATCAA+AGG + chr8.4:64252076-64252095 None:intergenic 25.0%
!! TATTGTTGCCTTTGATTTAA+TGG - chr8.4:64252065-64252084 MS.gene58239:CDS 25.0%
!! TTTCATAAAGATGGTAATGT+CGG + chr8.4:64251672-64251691 None:intergenic 25.0%
AAAGCAGGATCATTCTTTAA+TGG - chr8.4:64251994-64252013 MS.gene58239:CDS 30.0%
AAATTAAAGGTTCATGCAGA+GGG - chr8.4:64251689-64251708 MS.gene58239:CDS 30.0%
AAGCAGGATCATTCTTTAAT+GGG - chr8.4:64251995-64252014 MS.gene58239:CDS 30.0%
AAGTAGAGACTCTTTATACA+TGG + chr8.4:64252427-64252446 None:intergenic 30.0%
AATACAAACTGCAATCATCT+TGG - chr8.4:64252229-64252248 MS.gene58239:CDS 30.0%
CTTGTAATTCCTATTGACAT+TGG - chr8.4:64252261-64252280 MS.gene58239:CDS 30.0%
TCAAATTCGTTTGTAAGTCA+TGG - chr8.4:64251479-64251498 MS.gene58239:CDS 30.0%
TCTAAATATGATGACACAGA+TGG + chr8.4:64251895-64251914 None:intergenic 30.0%
TGAAACAGAATCATGGTTAA+TGG + chr8.4:64251626-64251645 None:intergenic 30.0%
! ATGTAATTTGGAACCATAAG+GGG + chr8.4:64251791-64251810 None:intergenic 30.0%
! CATGTAATTTGGAACCATAA+GGG + chr8.4:64251792-64251811 None:intergenic 30.0%
! TATTATGGTTTGTGGGTATT+TGG - chr8.4:64252141-64252160 MS.gene58239:CDS 30.0%
! TTCATAAAGATGGTAATGTC+GGG + chr8.4:64251671-64251690 None:intergenic 30.0%
! TTGCCTTTGATTTAATGGAA+AGG - chr8.4:64252070-64252089 MS.gene58239:CDS 30.0%
!! CACTTTTTGTAGAGCATATA+GGG + chr8.4:64252302-64252321 None:intergenic 30.0%
!! GGTTTATATTTTTGCACTGT+TGG - chr8.4:64251710-64251729 MS.gene58239:CDS 30.0%
!!! TATATGGTTTTGGTTATGAC+CGG - chr8.4:64251830-64251849 MS.gene58239:CDS 30.0%
AATTAACACAATTCTTGCGG+CGG + chr8.4:64251554-64251573 None:intergenic 35.0%
ACATCACTTATTTGAATGCC+AGG - chr8.4:64251962-64251981 MS.gene58239:CDS 35.0%
AGCAGGATCATTCTTTAATG+GGG - chr8.4:64251996-64252015 MS.gene58239:CDS 35.0%
ATAATCCGGCACTTGAAATA+TGG - chr8.4:64252196-64252215 MS.gene58239:CDS 35.0%
CCTATATGCTCTACAAAAAG+TGG - chr8.4:64252300-64252319 MS.gene58239:CDS 35.0%
CTATTGACATTGGAAAACCT+AGG - chr8.4:64252271-64252290 MS.gene58239:CDS 35.0%
GAAATTAAAGGTTCATGCAG+AGG - chr8.4:64251688-64251707 MS.gene58239:CDS 35.0%
GATATTATTGGAACTGATGG+TGG - chr8.4:64252324-64252343 MS.gene58239:CDS 35.0%
GCATTCAAATAAGTGATGTG+TGG + chr8.4:64251961-64251980 None:intergenic 35.0%
GGTGATATTATTGGAACTGA+TGG - chr8.4:64252321-64252340 MS.gene58239:CDS 35.0%
TAACCATGATTCTGTTTCAC+TGG - chr8.4:64251627-64251646 MS.gene58239:CDS 35.0%
TAATCATTCAAATCCTGCTG+AGG - chr8.4:64251431-64251450 MS.gene58239:CDS 35.0%
TAATCCGGCACTTGAAATAT+GGG - chr8.4:64252197-64252216 MS.gene58239:CDS 35.0%
TCATTATCATAGTTTACCGG+TGG - chr8.4:64252038-64252057 MS.gene58239:CDS 35.0%
TCGATGGTATGCATGTAATT+TGG + chr8.4:64251803-64251822 None:intergenic 35.0%
TCTTTAATGGGGCTATTCAT+TGG - chr8.4:64252007-64252026 MS.gene58239:CDS 35.0%
TCTTTGTGAAATCTAGTGGA+TGG + chr8.4:64251757-64251776 None:intergenic 35.0%
TTGGAGAATTTCTCAGTCTA+TGG - chr8.4:64252160-64252179 MS.gene58239:CDS 35.0%
! ATTCCTCTTCCAGATGATTT+TGG - chr8.4:64252105-64252124 MS.gene58239:CDS 35.0%
! CTAGGTTTTCCAATGTCAAT+AGG + chr8.4:64252273-64252292 None:intergenic 35.0%
! GCATGTAATTTGGAACCATA+AGG + chr8.4:64251793-64251812 None:intergenic 35.0%
! TCATAAAGATGGTAATGTCG+GGG + chr8.4:64251670-64251689 None:intergenic 35.0%
! TCCTGTGTATTATGGTTTGT+GGG - chr8.4:64252134-64252153 MS.gene58239:CDS 35.0%
!!! CCACTTTTTGTAGAGCATAT+AGG + chr8.4:64252303-64252322 None:intergenic 35.0%
AAATGTAAAAGAGACCTCGC+TGG + chr8.4:64251460-64251479 None:intergenic 40.0%
AACCATATAGCTGACATCGA+TGG + chr8.4:64251819-64251838 None:intergenic 40.0%
AAGGCAACAATAACTTCCAC+CGG + chr8.4:64252057-64252076 None:intergenic 40.0%
ACATGCGAATTTGCAAAGTG+AGG + chr8.4:64251523-64251542 None:intergenic 40.0%
ACCCACAAACCATAATACAC+AGG + chr8.4:64252138-64252157 None:intergenic 40.0%
ATAGAGCGAATTCCATCAAG+AGG + chr8.4:64251589-64251608 None:intergenic 40.0%
CCAAGTAATCATCTCTTGAC+CGG + chr8.4:64251852-64251871 None:intergenic 40.0%
GAAATACCTTTGTCCCCTTA+TGG - chr8.4:64251775-64251794 MS.gene58239:CDS 40.0%
GAGCATATAGGGAAAAACCT+AGG + chr8.4:64252291-64252310 None:intergenic 40.0%
GGACTATAGCCAAAATCATC+TGG + chr8.4:64252117-64252136 None:intergenic 40.0%
GGCTATAGTCCTGTGTATTA+TGG - chr8.4:64252126-64252145 MS.gene58239:CDS 40.0%
GTCAAGAGATGATTACTTGG+TGG - chr8.4:64251852-64251871 MS.gene58239:CDS 40.0%
GTCCTGTGTATTATGGTTTG+TGG - chr8.4:64252133-64252152 MS.gene58239:CDS 40.0%
TAATGGGGCTATTCATTGGT+TGG - chr8.4:64252011-64252030 MS.gene58239:CDS 40.0%
TACCATCGATGTCAGCTATA+TGG - chr8.4:64251814-64251833 MS.gene58239:CDS 40.0%
TAGCCAAAATCATCTGGAAG+AGG + chr8.4:64252111-64252130 None:intergenic 40.0%
TCTCGATGAGAGATAATACG+TGG - chr8.4:64251920-64251939 MS.gene58239:CDS 40.0%
TGATGACACAGATGGACAAA+AGG + chr8.4:64251887-64251906 None:intergenic 40.0%
! CGATGTCAGCTATATGGTTT+TGG - chr8.4:64251820-64251839 MS.gene58239:CDS 40.0%
!! AACTGATGGTGGTAATGGAT+TGG - chr8.4:64252335-64252354 MS.gene58239:CDS 40.0%
!! ATTGGAACTGATGGTGGTAA+TGG - chr8.4:64252330-64252349 MS.gene58239:CDS 40.0%
!! GAATCTAAAGGCATCTGAAG+TGG - chr8.4:64252401-64252420 MS.gene58239:CDS 40.0%
AAACTACCTCACGATCACCA+GGG + chr8.4:64252455-64252474 None:intergenic 45.0%
CCGGTCAAGAGATGATTACT+TGG - chr8.4:64251849-64251868 MS.gene58239:CDS 45.0%
GGTCCAGTGAAACAGAATCA+TGG + chr8.4:64251633-64251652 None:intergenic 45.0%
GTCGGGGAAGTAGAAAAGTA+TGG + chr8.4:64251654-64251673 None:intergenic 45.0%
GTTGGAGAAACCTCTACGTA+TGG - chr8.4:64251728-64251747 MS.gene58239:CDS 45.0%
TAAACTACCTCACGATCACC+AGG + chr8.4:64252456-64252475 None:intergenic 45.0%
TCAAGAACTCCACCTCTTGA+TGG - chr8.4:64251574-64251593 MS.gene58239:CDS 45.0%
TCCTGCTTTACGATAAGTCC+TGG + chr8.4:64251983-64252002 None:intergenic 45.0%
TTGGAACCATAAGGGGACAA+AGG + chr8.4:64251784-64251803 None:intergenic 45.0%
! ATCGCCCATATTTCAAGTGC+CGG + chr8.4:64252204-64252223 None:intergenic 45.0%
! TGGATGGATTCCATACGTAG+AGG + chr8.4:64251741-64251760 None:intergenic 45.0%
GAGCGAATTCCATCAAGAGG+TGG + chr8.4:64251586-64251605 None:intergenic 50.0%
GAGTCTCTACTTTCACTCCC+TGG - chr8.4:64252435-64252454 MS.gene58239:CDS 50.0%
GCCAGGACTTATCGTAAAGC+AGG - chr8.4:64251979-64251998 MS.gene58239:CDS 50.0%
TTCACTCCCTGGTGATCGTG+AGG - chr8.4:64252446-64252465 MS.gene58239:CDS 55.0%
ACCTCGCTGGCAACCTCAGC+AGG + chr8.4:64251447-64251466 None:intergenic 65.0%
TCCTGCTGAGGTTGCCAGCG+AGG - chr8.4:64251443-64251462 MS.gene58239:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 64251391 64252476 64251391 ID=MS.gene58239
chr8.4 mRNA 64251391 64252476 64251391 ID=MS.gene58239.t1;Parent=MS.gene58239
chr8.4 exon 64251391 64252476 64251391 ID=MS.gene58239.t1.exon1;Parent=MS.gene58239.t1
chr8.4 CDS 64251391 64252476 64251391 ID=cds.MS.gene58239.t1;Parent=MS.gene58239.t1
Gene Sequence

>MS.gene58239

ATGGCGAAGATGAACGAGAAGTTATATCTTCCTTCTGAGTTAATCATTCAAATCCTGCTGAGGTTGCCAGCGAGGTCTCTTTTACATTTCAAATTCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATCCTCACTTTGCAAATTCGCATGTTGATGTTTCCGCCGCAAGAATTGTGTTAATTTCAAGAACTCCACCTCTTGATGGAATTCGCTCTATAGATTTTGAAACATCCATTAACCATGATTCTGTTTCACTGGACCATACTTTTCTACTTCCCCGACATTACCATCTTTATGAAATTAAAGGTTCATGCAGAGGGTTTATATTTTTGCACTGTTGGAGAAACCTCTACGTATGGAATCCATCCACTAGATTTCACAAAGAAATACCTTTGTCCCCTTATGGTTCCAAATTACATGCATACCATCGATGTCAGCTATATGGTTTTGGTTATGACCGGTCAAGAGATGATTACTTGGTGGTTTTATTGTCCTTTTGTCCATCTGTGTCATCATATTTAGAGTTTTTCTCGATGAGAGATAATACGTGGAATAAAATTGAAGGTCCACACATCACTTATTTGAATGCCAGGACTTATCGTAAAGCAGGATCATTCTTTAATGGGGCTATTCATTGGTTGGCTTCTCATTATCATAGTTTACCGGTGGAAGTTATTGTTGCCTTTGATTTAATGGAAAGGAAACTGTTAGAGATTCCTCTTCCAGATGATTTTGGCTATAGTCCTGTGTATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATATGAATTTTCATAATCCGGCACTTGAAATATGGGCGATGAAAGAATACAAACTGCAATCATCTTGGACTAAAACTCTTGTAATTCCTATTGACATTGGAAAACCTAGGTTTTTCCCTATATGCTCTACAAAAAGTGGTGATATTATTGGAACTGATGGTGGTAATGGATTGGTGAAGTATAATAATAAAGGACAACGGTTAGAGTATCTCAAAATGAATCTAAAGGCATCTGAAGTGGCCATGTATAAAGAGTCTCTACTTTCACTCCCTGGTGATCGTGAGGTAGTTTAA
Protein sequence

>MS.gene58239.t1

MAKMNEKLYLPSELIIQILLRLPARSLLHFKFVCKSWFSLISDPHFANSHVDVSAARIVLISRTPPLDGIRSIDFETSINHDSVSLDHTFLLPRHYHLYEIKGSCRGFIFLHCWRNLYVWNPSTRFHKEIPLSPYGSKLHAYHRCQLYGFGYDRSRDDYLVVLLSFCPSVSSYLEFFSMRDNTWNKIEGPHITYLNARTYRKAGSFFNGAIHWLASHYHSLPVEVIVAFDLMERKLLEIPLPDDFGYSPVYYGLWVFGEFLSLWNMNFHNPALEIWAMKEYKLQSSWTKTLVIPIDIGKPRFFPICSTKSGDIIGTDGGNGLVKYNNKGQRLEYLKMNLKASEVAMYKESLLSLPGDREVV