AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42445


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42445.t1 MTR_1g055135 63.130 377 123 9 1 364 1 374 2.95e-151 431
MS.gene42445.t1 MTR_5g097210 54.223 367 145 10 6 360 3 358 1.97e-121 355
MS.gene42445.t1 MTR_3g103020 52.815 373 153 8 6 364 14 377 1.72e-116 343
MS.gene42445.t1 MTR_1g055165 53.804 368 110 10 5 364 2 317 1.32e-115 338
MS.gene42445.t1 MTR_4g117750 54.270 363 145 7 10 360 1 354 1.54e-114 342
MS.gene42445.t1 MTR_4g117750 49.550 111 50 3 259 365 373 481 5.00e-25 106
MS.gene42445.t1 MTR_5g070080 49.105 391 162 10 4 365 2 384 1.65e-108 323
MS.gene42445.t1 MTR_4g117850 50.409 367 154 12 8 358 19 373 9.66e-107 318
MS.gene42445.t1 MTR_1g055195 60.204 294 95 7 76 359 191 472 1.54e-106 321
MS.gene42445.t1 MTR_5g070130 50.133 375 166 11 1 359 1 370 5.69e-106 317
MS.gene42445.t1 MTR_3g034180 49.211 380 171 11 2 364 114 488 3.31e-104 315
MS.gene42445.t1 MTR_3g034130 48.889 360 166 9 1 346 1 356 1.48e-102 307
MS.gene42445.t1 MTR_5g070088 47.815 389 163 8 1 359 1 379 7.93e-101 303
MS.gene42445.t1 MTR_6g060650 48.698 384 161 9 6 365 2 373 3.06e-100 301
MS.gene42445.t1 MTR_3g034160 48.248 371 173 8 10 364 7 374 6.51e-99 298
MS.gene42445.t1 MTR_4g117770 47.895 380 164 11 4 364 2 366 8.51e-99 297
MS.gene42445.t1 MTR_4g117810 47.895 380 164 11 4 364 2 366 8.51e-99 297
MS.gene42445.t1 MTR_4g094365 47.326 374 170 12 6 364 2 363 2.12e-97 294
MS.gene42445.t1 MTR_4g117780 48.229 367 165 9 12 364 11 366 6.82e-97 293
MS.gene42445.t1 MTR_4g109280 49.046 367 169 11 6 364 2 358 3.99e-96 290
MS.gene42445.t1 MTR_4g122850 49.861 361 153 16 23 364 12 363 6.81e-96 290
MS.gene42445.t1 MTR_4g109270 47.326 374 170 12 6 364 2 363 1.54e-95 289
MS.gene42445.t1 MTR_4g116330 45.000 380 181 10 1 364 12 379 7.36e-94 285
MS.gene42445.t1 MTR_4g023090 44.327 379 176 9 11 364 15 383 1.01e-93 285
MS.gene42445.t1 MTR_4g023070 45.238 378 173 13 12 365 3 370 8.80e-93 282
MS.gene42445.t1 MTR_4g023080 46.027 365 171 9 10 365 7 354 9.14e-93 281
MS.gene42445.t1 MTR_4g021785 45.067 375 174 10 1 364 1 354 1.36e-90 276
MS.gene42445.t1 MTR_4g023120 44.271 384 166 14 12 364 3 369 5.69e-90 275
MS.gene42445.t1 MTR_4g118380 46.133 362 160 8 6 339 2 356 5.43e-88 270
MS.gene42445.t1 MTR_4g117720 45.257 369 139 10 10 360 49 372 7.61e-88 270
MS.gene42445.t1 MTR_4g023190 46.774 372 170 13 4 363 2 357 2.17e-87 268
MS.gene42445.t1 MTR_4g023150 44.357 381 167 12 4 363 2 358 1.04e-86 266
MS.gene42445.t1 MTR_8g433040 43.700 373 173 11 7 364 13 363 1.66e-85 263
MS.gene42445.t1 MTR_8g032380 43.700 373 173 11 7 364 13 363 1.66e-85 263
MS.gene42445.t1 MTR_4g023380 41.250 400 173 10 1 365 5 377 1.78e-85 264
MS.gene42445.t1 MTR_4g023130 42.700 363 145 7 10 365 7 313 9.21e-82 252
MS.gene42445.t1 MTR_1g055250 64.055 217 69 6 139 352 43 253 1.84e-81 252
MS.gene42445.t1 MTR_4g023200 45.014 351 164 13 26 363 24 358 1.05e-80 251
MS.gene42445.t1 MTR_4g118370 54.132 242 89 4 122 360 33 255 3.50e-78 241
MS.gene42445.t1 MTR_4g116330 41.316 380 156 11 1 364 12 340 4.80e-76 238
MS.gene42445.t1 MTR_4g023440 41.873 363 154 10 11 364 17 331 2.25e-75 236
MS.gene42445.t1 MTR_8g032390 43.207 368 161 13 8 360 36 370 4.16e-75 237
MS.gene42445.t1 MTR_1g055175 62.176 193 68 3 176 364 9 200 4.06e-73 226
MS.gene42445.t1 MTR_4g121580 41.867 375 158 17 4 355 2 339 5.05e-67 216
MS.gene42445.t1 MTR_8g013010 48.736 277 113 10 6 268 48 309 8.52e-67 214
MS.gene42445.t1 MTR_8g433030 40.385 364 144 10 8 360 36 337 1.36e-64 209
MS.gene42445.t1 MTR_7g079370 41.056 341 175 11 41 360 16 351 4.77e-61 200
MS.gene42445.t1 MTR_4g118400 36.667 360 155 11 6 359 2 294 3.28e-57 188
MS.gene42445.t1 MTR_2g048580 35.150 367 203 12 6 364 2 341 6.28e-56 186
MS.gene42445.t1 MTR_4g117870 39.869 306 131 11 70 364 3 266 1.39e-55 183
MS.gene42445.t1 MTR_7g079400 41.356 295 155 9 83 364 47 336 2.51e-53 179
MS.gene42445.t1 MTR_8g102520 35.150 367 175 11 10 364 6 321 2.84e-52 176
MS.gene42445.t1 MTR_4g116320 43.636 220 106 5 150 360 43 253 4.10e-46 158
MS.gene42445.t1 MTR_4g116340 43.802 242 93 9 9 234 33 247 3.14e-42 148
MS.gene42445.t1 MTR_8g040935 41.379 203 108 4 170 364 8 207 2.00e-40 142
MS.gene42445.t1 MTR_6g463430 41.148 209 110 6 161 364 1 201 1.58e-38 137
MS.gene42445.t1 MTR_4g117530 38.288 222 96 5 143 364 72 252 2.91e-35 129
MS.gene42445.t1 MTR_7g117720 44.724 199 74 7 4 189 2 177 4.28e-35 130
MS.gene42445.t1 MTR_7g117720 43.678 87 43 3 280 360 186 272 4.15e-13 69.3
MS.gene42445.t1 MTR_4g114700 36.538 260 102 9 110 356 9 218 5.29e-35 129
MS.gene42445.t1 MTR_7g079420 36.162 271 118 10 109 360 905 1139 6.54e-35 136
MS.gene42445.t1 MTR_5g069120 47.802 182 71 9 22 184 1 177 3.14e-32 119
MS.gene42445.t1 MTR_5g057790 34.169 319 160 14 12 307 46 337 4.84e-32 124
MS.gene42445.t1 MTR_1g055145 67.368 95 30 1 15 108 36 130 1.88e-31 120
MS.gene42445.t1 MTR_1g055145 56.000 75 31 2 210 283 129 202 2.92e-15 75.5
MS.gene42445.t1 MTR_2g021150 31.099 373 214 17 11 357 13 368 2.31e-31 122
MS.gene42445.t1 MTR_4g118360 51.376 109 47 3 255 359 14 120 6.45e-31 114
MS.gene42445.t1 MTR_1g094210 29.178 377 215 13 5 357 50 398 3.04e-30 119
MS.gene42445.t1 MTR_5g022420 28.796 382 225 15 2 357 17 377 3.91e-30 119
MS.gene42445.t1 MTR_1g094210 29.577 355 199 12 5 336 50 376 3.94e-30 119
MS.gene42445.t1 MTR_1g097490 30.168 358 222 13 12 357 49 390 8.27e-30 118
MS.gene42445.t1 MTR_4g055060 32.154 311 177 13 12 301 30 327 3.15e-29 116
MS.gene42445.t1 MTR_4g117430 45.695 151 65 3 122 268 15 152 3.69e-29 110
MS.gene42445.t1 MTR_5g057710 33.121 314 164 14 12 304 46 334 4.39e-29 116
MS.gene42445.t1 MTR_4g061340 30.233 301 175 9 12 292 26 311 2.21e-28 114
MS.gene42445.t1 MTR_3g009310 32.558 301 163 13 12 292 42 322 2.72e-28 114
MS.gene42445.t1 MTR_4g107820 27.807 374 233 12 3 357 30 385 1.26e-27 112
MS.gene42445.t1 MTR_4g107780 27.807 374 233 12 3 357 30 385 1.26e-27 112
MS.gene42445.t1 MTR_4g107780 27.807 374 233 12 3 357 30 385 1.29e-27 112
MS.gene42445.t1 MTR_5g057020 32.517 286 166 10 12 291 46 310 1.40e-27 111
MS.gene42445.t1 MTR_4g107820 27.807 374 233 12 3 357 30 385 1.40e-27 112
MS.gene42445.t1 MTR_4g108820 29.966 297 158 12 9 299 39 291 2.44e-27 110
MS.gene42445.t1 MTR_1g097330 30.667 300 181 11 12 299 16 300 1.20e-26 110
MS.gene42445.t1 MTR_5g057690 32.404 287 172 9 12 292 46 316 2.72e-26 108
MS.gene42445.t1 MTR_3g007430 31.293 294 171 10 15 292 46 324 3.41e-26 108
MS.gene42445.t1 MTR_3g036290 30.164 305 171 14 12 301 22 299 3.74e-26 107
MS.gene42445.t1 MTR_1g097560 28.841 371 206 15 12 357 36 373 6.77e-26 107
MS.gene42445.t1 MTR_8g101580 26.064 376 242 12 2 357 35 394 2.50e-25 105
MS.gene42445.t1 MTR_2g055970 31.208 298 176 13 10 292 209 492 2.52e-25 107
MS.gene42445.t1 MTR_3g007360 28.834 326 194 13 15 318 55 364 3.07e-25 105
MS.gene42445.t1 MTR_3g007410 29.630 324 178 13 15 313 55 353 4.78e-25 105
MS.gene42445.t1 MTR_1g050542 27.913 369 221 16 12 357 58 404 7.22e-25 104
MS.gene42445.t1 MTR_6g065980 28.472 288 178 10 12 292 16 282 8.63e-25 103
MS.gene42445.t1 MTR_1g056710 31.250 304 171 12 12 296 34 318 2.45e-24 103
MS.gene42445.t1 MTR_5g046300 29.934 304 162 14 12 292 4 279 4.26e-24 102
MS.gene42445.t1 MTR_5g046290 29.934 304 162 14 12 292 4 279 4.26e-24 102
MS.gene42445.t1 MTR_3g007330 31.561 301 161 10 12 292 48 323 4.81e-24 102
MS.gene42445.t1 MTR_6g027910 27.577 388 217 14 12 357 9 374 6.73e-24 101
MS.gene42445.t1 MTR_3g013770 32.063 315 170 14 12 303 33 326 7.59e-24 101
MS.gene42445.t1 MTR_3g013740 30.887 327 156 17 12 296 44 342 7.89e-24 102
MS.gene42445.t1 MTR_7g070440 30.060 336 191 14 11 316 6 327 9.41e-24 101
MS.gene42445.t1 MTR_3g014540 30.164 305 167 13 12 292 29 311 1.28e-23 100
MS.gene42445.t1 MTR_1g055200 60.000 80 30 1 107 184 6 85 1.61e-23 94.0
MS.gene42445.t1 MTR_3g023930 30.640 297 154 12 12 292 34 294 2.12e-23 100
MS.gene42445.t1 MTR_4g031770 30.375 293 181 12 12 292 4 285 6.76e-23 99.0
MS.gene42445.t1 MTR_5g011200 28.205 312 184 13 12 303 17 308 1.14e-22 98.2
MS.gene42445.t1 MTR_3g036430 28.475 295 152 10 12 292 20 269 1.18e-22 97.8
MS.gene42445.t1 MTR_2g021155 28.904 301 175 10 12 292 36 317 1.37e-22 100
MS.gene42445.t1 MTR_8g467140 34.239 184 113 4 2 179 22 203 1.45e-22 97.4
MS.gene42445.t1 MTR_4g133170 25.449 334 198 12 12 318 4 313 1.52e-22 98.2
MS.gene42445.t1 MTR_3g010430 30.844 308 161 15 12 292 36 318 1.86e-22 98.2
MS.gene42445.t1 MTR_5g023000 46.739 92 47 1 275 364 7 98 3.15e-22 90.5
MS.gene42445.t1 MTR_3g436150 31.210 314 176 13 7 292 26 327 3.90e-22 97.1
MS.gene42445.t1 MTR_4g109290 41.401 157 57 4 11 161 8 135 4.01e-22 92.8
MS.gene42445.t1 MTR_4g023430 53.333 90 41 1 4 92 33 122 4.17e-22 93.6
MS.gene42445.t1 MTR_4g023430 41.975 81 42 1 289 364 141 221 1.84e-11 63.5
MS.gene42445.t1 MTR_2g021190 30.169 295 181 11 12 292 21 304 4.69e-22 96.7
MS.gene42445.t1 MTR_3g014570 29.836 305 168 12 12 292 29 311 5.90e-22 96.3
MS.gene42445.t1 MTR_2g029990 30.100 299 174 14 13 292 52 334 6.65e-22 96.3
MS.gene42445.t1 MTR_1g068835 28.105 306 181 13 12 296 4 291 7.37e-22 95.9
MS.gene42445.t1 MTR_4g122860 36.196 163 70 5 210 364 183 319 1.05e-21 95.1
MS.gene42445.t1 MTR_4g122860 42.975 121 65 3 1 120 60 177 2.73e-14 73.6
MS.gene42445.t1 MTR_2g046830 28.618 304 186 11 11 299 24 311 1.09e-21 95.9
MS.gene42445.t1 MTR_3g006670 30.915 317 182 13 7 302 43 343 1.37e-21 95.5
MS.gene42445.t1 MTR_2g046900 27.778 306 194 10 11 299 27 322 1.66e-21 95.1
MS.gene42445.t1 MTR_1g054575 29.967 307 173 15 3 291 44 326 2.03e-21 96.3
MS.gene42445.t1 MTR_2g021210 30.479 292 173 9 12 292 84 356 2.52e-21 95.1
MS.gene42445.t1 MTR_4g080200 28.525 305 173 11 10 293 1 281 4.12e-21 93.6
MS.gene42445.t1 MTR_7g007300 29.355 310 152 12 12 292 103 374 6.16e-21 94.0
MS.gene42445.t1 MTR_7g055977 28.169 355 188 13 10 318 5 338 7.34e-21 93.2
MS.gene42445.t1 MTR_3g030250 27.458 295 175 9 12 292 37 306 9.61e-21 92.8
MS.gene42445.t1 MTR_2g021252 26.829 287 181 8 15 292 50 316 1.03e-20 92.8
MS.gene42445.t1 MTR_5g057643 35.556 180 99 6 12 177 46 222 1.15e-20 90.9
MS.gene42445.t1 MTR_2g046920 28.053 303 189 11 11 299 23 310 1.51e-20 92.0
MS.gene42445.t1 MTR_8g098830 31.720 186 120 4 176 359 35 215 1.65e-20 89.4
MS.gene42445.t1 MTR_1g088120 26.154 325 199 10 9 297 7 326 1.69e-20 92.4
MS.gene42445.t1 MTR_2g028130 26.276 392 219 18 12 345 5 384 1.84e-20 92.4
MS.gene42445.t1 MTR_8g073550 37.195 164 82 4 11 159 29 186 1.99e-20 89.4
MS.gene42445.t1 MTR_1g068875 27.273 330 198 14 12 318 4 314 2.20e-20 91.7
MS.gene42445.t1 MTR_7g079450 38.686 137 77 4 231 364 4 136 2.61e-20 86.3
MS.gene42445.t1 MTR_7g060940 27.515 338 176 11 6 300 16 327 3.03e-20 91.7
MS.gene42445.t1 MTR_7g407070 29.653 317 172 14 12 292 32 333 3.09e-20 91.7
MS.gene42445.t1 MTR_7g055870 27.053 414 205 20 2 334 5 402 3.72e-20 91.7
MS.gene42445.t1 MTR_3g009240 29.153 295 177 10 12 292 36 312 3.75e-20 91.3
MS.gene42445.t1 MTR_3g006500 29.114 316 167 13 5 292 10 296 4.98e-20 90.5
MS.gene42445.t1 MTR_6g053260 28.000 300 181 11 12 292 337 620 5.81e-20 92.0
MS.gene42445.t1 MTR_7g055930 26.570 414 207 19 2 334 5 402 6.21e-20 90.9
MS.gene42445.t1 MTR_1g054725 28.387 310 172 14 11 292 19 306 6.32e-20 90.5
MS.gene42445.t1 MTR_7g066000 27.778 342 208 14 10 318 23 358 6.39e-20 90.5
MS.gene42445.t1 MTR_6g021880 27.241 290 183 13 23 292 31 312 6.73e-20 90.5
MS.gene42445.t1 MTR_8g062660 27.389 314 184 11 3 290 14 309 8.42e-20 91.3
MS.gene42445.t1 MTR_7g067680 29.934 304 149 15 12 292 49 311 8.47e-20 90.1
MS.gene42445.t1 MTR_7g078860 28.704 324 177 11 11 294 8 317 1.03e-19 90.1
MS.gene42445.t1 MTR_5g046260 27.645 293 153 14 12 292 4 249 1.11e-19 88.6
MS.gene42445.t1 MTR_2g047832 27.987 318 190 13 11 299 28 335 1.22e-19 90.1
MS.gene42445.t1 MTR_3g083640 27.483 302 183 11 7 292 49 330 1.23e-19 89.7
MS.gene42445.t1 MTR_6g053240 27.961 304 181 11 12 292 28 316 1.24e-19 89.7
MS.gene42445.t1 MTR_7g070880 26.247 381 201 15 2 318 11 375 1.34e-19 89.7
MS.gene42445.t1 MTR_3g010970 27.458 295 168 12 15 292 51 316 1.43e-19 89.7
MS.gene42445.t1 MTR_7g056760 26.225 347 218 12 7 318 18 361 1.45e-19 89.7
MS.gene42445.t1 MTR_3g011100 28.981 314 163 12 12 292 235 521 2.43e-19 89.7
MS.gene42445.t1 MTR_7g028660 25.545 321 194 7 9 297 8 315 2.47e-19 88.6
MS.gene42445.t1 MTR_0760s0010 29.693 293 165 10 17 293 52 319 2.72e-19 88.6
MS.gene42445.t1 MTR_8g099460 26.433 314 185 11 12 296 5 301 3.04e-19 88.6
MS.gene42445.t1 MTR_7g060960 29.023 348 178 16 5 325 25 330 3.23e-19 88.2
MS.gene42445.t1 MTR_3g058480 31.325 249 128 11 12 232 39 272 3.79e-19 87.4
MS.gene42445.t1 MTR_0128s0020 25.888 394 224 13 12 356 18 392 4.00e-19 88.2
MS.gene42445.t1 MTR_2g031640 25.797 345 220 11 12 334 6 336 4.03e-19 88.2
MS.gene42445.t1 MTR_1g068860 26.374 364 219 14 12 348 4 345 4.15e-19 88.2
MS.gene42445.t1 MTR_2g078900 28.339 307 187 12 1 292 21 309 4.70e-19 87.8
MS.gene42445.t1 MTR_4g037465 29.306 389 194 18 4 337 13 375 4.74e-19 88.2
MS.gene42445.t1 MTR_7g062100 28.080 349 203 14 5 318 19 354 9.57e-19 87.0
MS.gene42445.t1 MTR_7g070830 25.722 381 203 15 2 318 11 375 9.77e-19 87.4
MS.gene42445.t1 MTR_3g010590 27.055 292 178 10 12 292 39 306 1.20e-18 86.7
MS.gene42445.t1 MTR_3g009260 30.435 299 159 17 15 292 44 314 1.47e-18 86.7
MS.gene42445.t1 MTR_5g057040 36.095 169 89 6 12 165 46 210 1.96e-18 87.4
MS.gene42445.t1 MTR_3g010920 28.669 293 167 13 12 292 44 306 2.13e-18 85.9
MS.gene42445.t1 MTR_3g007300 30.479 292 150 13 12 292 49 298 2.19e-18 85.9
MS.gene42445.t1 MTR_3g024110 29.568 301 177 14 6 292 94 373 2.40e-18 86.3
MS.gene42445.t1 MTR_4g014370 24.757 412 236 17 11 361 10 408 2.46e-18 86.3
MS.gene42445.t1 MTR_7g057270 29.538 325 173 15 12 294 26 336 4.08e-18 85.5
MS.gene42445.t1 MTR_2g104340 24.561 399 237 13 11 361 13 395 4.12e-18 85.5
MS.gene42445.t1 MTR_7g061060 26.685 371 181 16 10 323 11 347 4.34e-18 85.1
MS.gene42445.t1 MTR_2g426020 24.935 385 234 13 12 356 6 375 4.43e-18 85.1
MS.gene42445.t1 MTR_3g011060 29.450 309 174 14 12 292 28 320 4.92e-18 85.1
MS.gene42445.t1 MTR_5g007610 30.159 315 163 16 12 292 41 332 5.21e-18 85.1
MS.gene42445.t1 MTR_3g030330 26.780 295 180 10 12 292 20 292 6.57e-18 84.3
MS.gene42445.t1 MTR_3g007270 28.012 332 180 15 12 307 47 355 1.12e-17 84.3
MS.gene42445.t1 MTR_0044s0300 29.801 302 167 15 12 292 38 315 1.16e-17 84.0
MS.gene42445.t1 MTR_5g069390 25.495 404 226 17 11 356 25 411 1.44e-17 84.3
MS.gene42445.t1 MTR_2g028140 27.363 402 204 21 12 358 5 373 1.51e-17 84.0
MS.gene42445.t1 MTR_1g055070 30.827 266 143 9 12 247 49 303 1.67e-17 83.6
MS.gene42445.t1 MTR_3g006570 28.618 304 171 14 12 292 21 301 1.87e-17 83.2
MS.gene42445.t1 MTR_7g061050 26.935 323 170 13 10 292 11 307 2.00e-17 83.2
MS.gene42445.t1 MTR_2g028160 26.211 351 201 14 12 318 5 341 2.14e-17 83.6
MS.gene42445.t1 MTR_6g055210 26.882 372 192 17 11 318 21 376 2.33e-17 83.6
MS.gene42445.t1 MTR_0097s0030 27.174 368 183 17 12 329 14 346 2.48e-17 82.8
MS.gene42445.t1 MTR_2g047240 27.174 368 183 17 12 329 14 346 2.48e-17 82.8
MS.gene42445.t1 MTR_8g064890 30.650 323 183 16 2 292 6 319 2.53e-17 82.8
MS.gene42445.t1 MTR_7g077070 26.100 341 191 14 12 301 16 346 2.54e-17 83.2
MS.gene42445.t1 MTR_2g078850 27.273 297 177 8 15 292 33 309 2.55e-17 82.8
MS.gene42445.t1 MTR_0128s0070 27.062 388 226 15 12 356 22 395 2.80e-17 82.8
MS.gene42445.t1 MTR_4g019990 25.641 390 230 17 11 357 5 377 3.13e-17 82.8
MS.gene42445.t1 MTR_6g090180 26.185 401 231 20 11 358 46 434 3.99e-17 82.8
MS.gene42445.t1 MTR_2g031720 26.331 357 207 12 12 334 6 340 4.22e-17 82.4
MS.gene42445.t1 MTR_3g083010 26.303 403 229 16 12 359 6 395 4.91e-17 82.4
MS.gene42445.t1 MTR_1g058190 29.221 308 169 15 2 292 25 300 5.32e-17 81.6
MS.gene42445.t1 MTR_2g426060 26.380 326 180 12 12 296 6 312 5.58e-17 82.0
MS.gene42445.t1 MTR_7g017040 26.368 402 230 17 11 363 15 399 5.90e-17 82.0
MS.gene42445.t1 MTR_6g086920 25.330 454 217 21 10 359 36 471 6.45e-17 82.4
MS.gene42445.t1 MTR_7g052670 24.590 427 236 18 5 357 10 424 7.60e-17 82.0
MS.gene42445.t1 MTR_3g011020 29.236 301 166 13 12 292 28 301 8.36e-17 81.3
MS.gene42445.t1 MTR_2g028110 26.415 371 216 15 12 345 4 354 1.00e-16 81.3
MS.gene42445.t1 MTR_7g056820 26.703 367 211 17 12 338 7 355 1.12e-16 80.9
MS.gene42445.t1 MTR_0464s0020 30.233 344 168 15 5 294 16 341 1.20e-16 81.3
MS.gene42445.t1 MTR_0129s0050 26.442 416 214 20 11 358 13 404 1.39e-16 80.9
MS.gene42445.t1 MTR_3g010520 27.974 311 165 15 2 292 15 286 1.43e-16 80.5
MS.gene42445.t1 MTR_5g008530 73.214 56 13 1 10 65 16 69 1.54e-16 73.9
MS.gene42445.t1 MTR_3g010620 26.316 304 172 12 9 292 30 301 1.56e-16 80.5
MS.gene42445.t1 MTR_3g030240 28.620 297 164 16 12 292 40 304 1.81e-16 80.5
MS.gene42445.t1 MTR_4g024890 24.675 308 195 11 11 292 9 305 2.15e-16 80.1
MS.gene42445.t1 MTR_0267s0050 26.722 363 177 17 15 318 9 341 2.17e-16 80.1
MS.gene42445.t1 MTR_3g006530 25.974 385 218 17 12 357 40 396 2.60e-16 80.1
MS.gene42445.t1 MTR_5g069760 26.149 348 208 13 10 325 4 334 3.56e-16 79.3
MS.gene42445.t1 MTR_1g061330 24.552 391 223 17 12 363 4 361 4.14e-16 79.3
MS.gene42445.t1 MTR_4g129190 30.303 231 132 9 12 226 6 223 4.30e-16 79.3
MS.gene42445.t1 MTR_2g426070 25.654 382 219 16 13 355 7 362 4.33e-16 79.3
MS.gene42445.t1 MTR_3g036335 26.645 304 178 11 12 292 41 322 5.20e-16 79.0
MS.gene42445.t1 MTR_1g055375 28.763 299 179 13 15 292 7 292 6.19e-16 78.6
MS.gene42445.t1 MTR_5g096710 28.479 309 182 12 12 292 23 320 6.55e-16 79.0
MS.gene42445.t1 MTR_7g066100 25.857 321 192 10 10 292 9 321 6.68e-16 79.0
MS.gene42445.t1 MTR_7g013590 26.689 296 185 11 15 292 39 320 6.87e-16 79.0
MS.gene42445.t1 MTR_2g025420 24.250 400 236 14 12 357 6 392 7.18e-16 79.0
MS.gene42445.t1 MTR_3g010870 25.321 312 186 12 2 292 26 311 7.61e-16 78.6
MS.gene42445.t1 MTR_0707s0020 25.400 437 224 19 10 359 24 445 8.26e-16 79.0
MS.gene42445.t1 MTR_7g066030 25.000 376 207 14 10 330 19 374 9.23e-16 78.6
MS.gene42445.t1 MTR_2g026010 26.733 303 195 9 12 296 4 297 9.39e-16 78.2
MS.gene42445.t1 MTR_2g021050 26.073 303 184 11 12 296 5 285 9.49e-16 78.2
MS.gene42445.t1 MTR_8g046200 25.641 351 179 12 15 296 19 356 1.19e-15 78.2
MS.gene42445.t1 MTR_0649s0020 25.622 402 224 18 9 357 8 387 1.22e-15 77.8
MS.gene42445.t1 MTR_7g078040 28.902 346 170 16 9 294 6 335 1.41e-15 78.2
MS.gene42445.t1 MTR_3g011650 35.625 160 79 6 15 159 82 232 1.48e-15 76.6
MS.gene42445.t1 MTR_6g004660 27.187 320 195 13 1 292 1 310 1.67e-15 77.4
MS.gene42445.t1 MTR_3g007380 35.811 148 72 5 15 143 33 176 1.72e-15 75.5
MS.gene42445.t1 MTR_3g011120 25.967 362 212 18 4 330 6 346 1.81e-15 77.4
MS.gene42445.t1 MTR_0242s0060 28.144 334 175 16 9 294 6 322 1.83e-15 77.4
MS.gene42445.t1 MTR_0242s0040 28.144 334 175 16 9 294 6 322 1.83e-15 77.4
MS.gene42445.t1 MTR_7g056503 25.617 324 210 12 2 299 11 329 1.92e-15 77.4
MS.gene42445.t1 MTR_7g062060 25.076 327 195 11 11 294 11 330 1.96e-15 77.4
MS.gene42445.t1 MTR_7g052150 25.150 334 189 11 4 300 14 323 2.23e-15 77.4
MS.gene42445.t1 MTR_2g043410 30.061 326 170 13 10 294 20 328 2.26e-15 77.4
MS.gene42445.t1 MTR_3g058470 36.207 174 82 8 12 161 37 205 2.52e-15 77.0
MS.gene42445.t1 MTR_4g013180 24.468 376 225 13 10 339 9 371 2.62e-15 77.4
MS.gene42445.t1 MTR_1g037540 26.642 274 160 7 15 247 8 281 3.26e-15 76.6
MS.gene42445.t1 MTR_7g055850 32.394 213 97 9 2 172 5 212 3.37e-15 75.5
MS.gene42445.t1 MTR_4g030830 25.978 358 197 17 12 318 9 349 3.38e-15 76.6
MS.gene42445.t1 MTR_5g023570 41.071 112 61 3 7 117 31 138 4.02e-15 72.4
MS.gene42445.t1 MTR_2g031680 24.277 346 221 12 12 334 6 333 4.09e-15 76.3
MS.gene42445.t1 MTR_1g115160 25.256 293 196 8 9 294 19 295 4.75e-15 75.9
MS.gene42445.t1 MTR_3g009250 35.625 160 78 6 15 159 44 193 6.49e-15 73.9
MS.gene42445.t1 MTR_3g072470 28.060 335 159 14 15 294 22 329 6.70e-15 75.9
MS.gene42445.t1 MTR_2g021950 23.664 393 241 13 11 358 15 393 8.50e-15 75.5
MS.gene42445.t1 MTR_4g070550 27.273 319 182 13 12 292 5 311 8.50e-15 75.5
MS.gene42445.t1 MTR_5g069930 25.212 353 198 15 10 318 4 334 9.20e-15 75.1
MS.gene42445.t1 MTR_2g006360 27.097 310 156 12 5 300 40 293 1.14e-14 74.7
MS.gene42445.t1 MTR_3g024150 27.090 299 173 13 15 292 38 312 1.17e-14 75.1
MS.gene42445.t1 MTR_7g445890 24.793 363 210 15 9 330 13 353 1.19e-14 75.1
MS.gene42445.t1 MTR_6g034720 40.678 118 62 3 144 258 72 184 1.24e-14 72.8
MS.gene42445.t1 MTR_3g030350 27.027 296 183 11 12 292 35 312 1.25e-14 75.1
MS.gene42445.t1 MTR_6g017280 25.815 368 184 17 10 318 7 344 1.30e-14 74.7
MS.gene42445.t1 MTR_3g013950 27.123 365 175 19 15 318 9 343 1.37e-14 74.7
MS.gene42445.t1 MTR_0115s0020 26.752 314 196 13 12 293 10 321 1.45e-14 74.7
MS.gene42445.t1 MTR_4g013185 25.369 339 196 14 9 297 7 338 1.48e-14 74.7
MS.gene42445.t1 MTR_3g030310 25.402 311 177 11 12 292 21 306 1.81e-14 74.3
MS.gene42445.t1 MTR_2g437110 24.812 399 236 19 5 357 12 392 1.81e-14 74.7
MS.gene42445.t1 MTR_1g055055 27.476 313 165 16 12 301 26 299 1.93e-14 73.9
MS.gene42445.t1 MTR_0667s0010 26.225 347 194 17 12 318 6 330 2.03e-14 74.3
MS.gene42445.t1 MTR_8g063440 26.331 338 206 15 11 317 11 336 2.06e-14 74.3
MS.gene42445.t1 MTR_6g048120 27.070 314 179 11 9 292 33 326 2.30e-14 74.3
MS.gene42445.t1 MTR_6g086825 24.096 415 231 19 11 363 69 461 2.35e-14 74.3
MS.gene42445.t1 MTR_5g097350 26.190 378 220 18 21 358 25 383 2.51e-14 73.9
MS.gene42445.t1 MTR_0054s0090 24.205 409 233 17 11 361 16 405 2.70e-14 73.9
MS.gene42445.t1 MTR_0064s0160 25.888 394 241 18 11 363 41 424 3.18e-14 73.9
MS.gene42445.t1 MTR_0129s0070 27.007 411 227 21 5 364 10 398 3.56e-14 73.6
MS.gene42445.t1 MTR_6g048140 26.623 308 176 11 12 292 39 323 4.20e-14 73.6
MS.gene42445.t1 MTR_2g425980 26.543 324 183 15 12 296 5 312 4.62e-14 73.2
MS.gene42445.t1 MTR_7g066010 26.286 350 177 12 10 318 19 328 4.67e-14 73.2
MS.gene42445.t1 MTR_5g056020 25.369 339 200 12 2 292 7 340 5.39e-14 73.6
MS.gene42445.t1 MTR_7g056290 27.692 325 174 14 15 294 25 333 5.67e-14 73.2
MS.gene42445.t1 MTR_7g017170 26.807 332 192 16 12 303 18 338 5.95e-14 73.2
MS.gene42445.t1 MTR_7g017130 26.807 332 192 16 12 303 18 338 6.16e-14 72.8
MS.gene42445.t1 MTR_3g058440 30.242 248 133 11 12 236 35 265 6.76e-14 72.0
MS.gene42445.t1 MTR_7g022600 27.879 330 179 15 12 292 23 342 6.83e-14 72.8
MS.gene42445.t1 MTR_7g016930 27.586 319 167 15 11 293 15 305 6.88e-14 72.4
MS.gene42445.t1 MTR_3g023940 25.484 310 175 15 12 292 34 316 7.08e-14 72.8
MS.gene42445.t1 MTR_7g069550 24.370 357 203 15 12 317 14 354 7.47e-14 72.8
MS.gene42445.t1 MTR_7g077970 27.381 336 181 13 12 298 7 328 9.23e-14 72.4
MS.gene42445.t1 MTR_6g017270 30.653 199 119 8 9 189 5 202 9.79e-14 72.0
MS.gene42445.t1 MTR_7g056200 26.912 353 176 16 10 318 21 335 1.02e-13 72.0
MS.gene42445.t1 MTR_2g047892 24.451 319 190 12 9 292 19 321 1.10e-13 72.0
MS.gene42445.t1 MTR_2g426090 26.444 329 175 16 7 292 2 306 1.23e-13 72.0
MS.gene42445.t1 MTR_3g096250 32.941 170 88 7 12 163 47 208 1.31e-13 71.6
MS.gene42445.t1 MTR_1g442850 25.706 354 195 15 11 318 4 335 1.43e-13 71.6
MS.gene42445.t1 MTR_3g010440 33.094 139 75 5 12 139 26 157 1.43e-13 71.2
MS.gene42445.t1 MTR_8g041270 23.020 404 246 12 11 361 14 405 1.44e-13 71.6
MS.gene42445.t1 MTR_7g056797 30.672 238 140 10 7 223 18 251 1.51e-13 71.6
MS.gene42445.t1 MTR_6g016285 24.873 394 215 14 9 337 18 395 1.56e-13 72.0
MS.gene42445.t1 MTR_7g091630 26.019 319 195 13 8 292 28 339 1.67e-13 71.6
MS.gene42445.t1 MTR_3g437520 29.226 349 168 16 5 294 16 344 1.73e-13 71.6
MS.gene42445.t1 MTR_2g461450 26.756 299 190 11 5 292 11 291 1.91e-13 71.2
MS.gene42445.t1 MTR_1g007450 26.257 358 218 14 12 330 12 362 1.91e-13 71.6
MS.gene42445.t1 MTR_7g079640 25.341 367 203 16 5 330 6 342 1.94e-13 71.2
MS.gene42445.t1 MTR_0054s0100 23.844 411 234 17 11 361 16 407 2.00e-13 71.2
MS.gene42445.t1 MTR_4g117550 24.936 389 226 15 11 363 16 374 2.09e-13 71.2
MS.gene42445.t1 MTR_7g056390 26.852 324 178 14 15 294 21 329 2.61e-13 71.2
MS.gene42445.t1 MTR_4g006270 26.087 299 167 10 12 290 4 268 2.75e-13 70.9
MS.gene42445.t1 MTR_4g030090 23.548 310 198 10 13 292 15 315 3.09e-13 70.9
MS.gene42445.t1 MTR_5g068040 31.579 228 116 10 9 221 13 215 3.10e-13 70.5
MS.gene42445.t1 MTR_6g007135 23.659 317 202 11 7 296 17 320 3.65e-13 70.5
MS.gene42445.t1 MTR_2g047200 24.149 323 198 11 9 297 17 326 4.04e-13 70.5
MS.gene42445.t1 MTR_3g024040 27.562 283 176 12 19 292 38 300 4.10e-13 70.1
MS.gene42445.t1 MTR_4g030110 27.119 295 170 13 5 265 23 306 4.21e-13 70.1
MS.gene42445.t1 MTR_1g007410 23.496 349 188 12 11 303 21 346 4.91e-13 70.1
MS.gene42445.t1 MTR_8g013005 55.172 58 24 2 309 364 1 58 5.19e-13 63.5
MS.gene42445.t1 MTR_7g078840 25.434 346 187 13 9 294 7 341 5.76e-13 70.1
MS.gene42445.t1 MTR_7g078900 24.277 346 195 10 1 294 1 331 5.77e-13 70.1
MS.gene42445.t1 MTR_4g028680 25.307 407 226 18 11 361 15 399 8.27e-13 69.3
MS.gene42445.t1 MTR_7g061090 23.708 329 198 11 5 292 15 331 9.17e-13 69.3
MS.gene42445.t1 MTR_6g013270 27.303 304 190 13 9 294 26 316 9.60e-13 69.3
MS.gene42445.t1 MTR_7g078050 34.722 144 78 5 9 143 3 139 1.15e-12 67.4
MS.gene42445.t1 MTR_6g478230 22.651 415 245 19 1 362 16 407 1.20e-12 68.9
MS.gene42445.t1 MTR_7g055830 25.789 380 185 18 2 334 5 334 1.41e-12 68.6
MS.gene42445.t1 MTR_3g009290 27.347 245 137 10 12 239 35 255 1.59e-12 67.4
MS.gene42445.t1 MTR_1g023400 26.124 356 197 20 15 336 6 329 1.71e-12 68.2
MS.gene42445.t1 MTR_4g033495 25.600 375 200 16 7 326 22 372 1.81e-12 68.6
MS.gene42445.t1 MTR_6g092560 23.741 417 240 18 1 359 1 397 1.94e-12 68.6
MS.gene42445.t1 MTR_7g056570 26.769 325 166 16 9 292 15 308 2.19e-12 68.2
MS.gene42445.t1 MTR_7g056737 27.077 325 165 15 9 292 19 312 2.52e-12 68.2
MS.gene42445.t1 MTR_7g056170 25.000 420 210 17 10 357 73 459 2.60e-12 68.2
MS.gene42445.t1 MTR_7g066060 23.373 415 220 19 11 357 22 406 2.84e-12 68.2
MS.gene42445.t1 MTR_7g056003 26.994 326 175 13 15 297 18 323 2.98e-12 67.8
MS.gene42445.t1 MTR_4g013175 25.441 397 221 16 9 339 7 394 3.03e-12 67.8
MS.gene42445.t1 MTR_5g037680 24.051 395 232 17 11 357 7 381 3.10e-12 67.8
MS.gene42445.t1 MTR_7g050480 27.864 323 179 14 10 300 20 320 4.06e-12 67.4
MS.gene42445.t1 MTR_3g010870 32.240 183 98 8 2 165 26 201 4.61e-12 66.6
MS.gene42445.t1 MTR_7g050520 27.829 327 174 13 10 300 20 320 4.70e-12 67.0
MS.gene42445.t1 MTR_7g066080 22.951 366 201 14 12 318 16 359 4.98e-12 67.4
MS.gene42445.t1 MTR_6g460450 36.134 119 68 3 4 115 21 138 5.12e-12 63.5
MS.gene42445.t1 MTR_7g055987 27.219 338 185 17 15 316 23 335 5.50e-12 66.6
MS.gene42445.t1 MTR_7g091640 26.154 325 183 16 8 292 31 338 7.03e-12 66.6
MS.gene42445.t1 MTR_4g024870 26.786 224 141 7 13 221 45 260 9.29e-12 66.2
MS.gene42445.t1 MTR_7g061010 26.205 332 188 11 3 300 13 321 1.16e-11 65.9
MS.gene42445.t1 MTR_7g035295 23.316 386 198 13 2 330 6 350 1.20e-11 65.9
MS.gene42445.t1 MTR_1g071010 28.125 192 119 5 13 191 16 201 1.80e-11 65.5
MS.gene42445.t1 MTR_5g027330 22.590 332 202 11 16 310 44 357 2.01e-11 65.5
MS.gene42445.t1 MTR_6g079810 22.683 410 238 17 10 358 68 459 2.21e-11 65.5
MS.gene42445.t1 MTR_7g061100 29.817 218 116 7 11 227 12 193 2.24e-11 64.7
MS.gene42445.t1 MTR_3g464470 23.352 364 198 11 7 318 2 336 2.43e-11 65.1
MS.gene42445.t1 MTR_5g027370 23.123 333 199 11 16 310 33 346 2.76e-11 65.1
MS.gene42445.t1 MTR_7g056710 28.017 232 130 9 7 221 13 224 2.92e-11 64.7
MS.gene42445.t1 MTR_0129s0120 25.871 402 231 19 5 359 10 391 3.52e-11 64.3
MS.gene42445.t1 MTR_4g089125 36.047 86 54 1 1 86 1 85 4.80e-11 59.3
MS.gene42445.t1 MTR_4g030760 27.807 187 112 6 12 184 73 250 5.36e-11 63.9
MS.gene42445.t1 MTR_2g064950 24.810 395 191 18 11 338 9 364 5.59e-11 63.9
MS.gene42445.t1 MTR_4g023100 45.312 64 35 0 301 364 55 118 6.10e-11 59.7
MS.gene42445.t1 MTR_3g080370 23.153 406 225 13 2 339 11 397 6.50e-11 63.9
MS.gene42445.t1 MTR_7g022670 25.084 299 156 10 12 292 23 271 8.66e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42445.t1 AT3G06240 27.361 413 230 17 4 362 28 424 2.64e-23 100
MS.gene42445.t1 AT3G23880 27.575 301 191 9 9 294 11 299 2.79e-21 94.4
MS.gene42445.t1 AT4G12560 29.508 305 182 13 12 292 4 299 1.48e-19 89.7
MS.gene42445.t1 AT4G12560 29.508 305 182 13 12 292 4 299 1.48e-19 89.7
MS.gene42445.t1 AT4G12560 29.508 305 182 13 12 292 4 299 1.48e-19 89.7
MS.gene42445.t1 AT5G49610 28.532 361 211 16 13 351 10 345 5.07e-19 87.8
MS.gene42445.t1 AT4G22390 24.534 322 216 10 13 314 5 319 5.03e-16 79.3
MS.gene42445.t1 AT4G22390 24.534 322 216 10 13 314 5 319 6.08e-16 79.0
MS.gene42445.t1 AT1G33530 28.041 296 174 15 12 293 97 367 3.27e-15 77.0
MS.gene42445.t1 AT1G30790 25.926 324 172 13 11 293 8 304 4.17e-14 73.6
MS.gene42445.t1 AT3G16210 26.102 295 184 14 11 298 4 271 5.86e-13 69.7
MS.gene42445.t1 AT1G70960 22.368 304 196 10 12 295 9 292 1.55e-12 68.6
MS.gene42445.t1 AT3G10430 27.273 253 153 10 12 251 5 239 2.43e-12 67.8
MS.gene42445.t1 AT2G40925 23.988 321 194 12 12 305 27 324 1.20e-11 65.9
MS.gene42445.t1 AT3G52320 22.590 332 218 11 12 327 27 335 2.21e-11 65.1
MS.gene42445.t1 AT1G11270 26.531 245 143 11 10 236 33 258 2.78e-11 64.3
MS.gene42445.t1 AT1G11270 26.531 245 143 11 10 236 33 258 2.78e-11 64.3
MS.gene42445.t1 AT3G08750 26.354 277 173 14 12 280 12 265 2.84e-11 64.7
MS.gene42445.t1 AT1G47340 23.323 313 183 10 12 292 6 293 5.42e-11 63.9
MS.gene42445.t1 AT1G47340 23.323 313 183 10 12 292 6 293 5.42e-11 63.9
MS.gene42445.t1 AT1G47390 28.626 262 156 13 12 263 7 247 5.62e-11 63.9
MS.gene42445.t1 AT2G40920 25.846 325 176 17 17 302 59 357 5.77e-11 63.9
MS.gene42445.t1 AT1G47340 23.323 313 183 10 12 292 37 324 6.11e-11 63.9
MS.gene42445.t1 AT2G16810 27.500 200 120 6 5 185 29 222 8.30e-11 62.8

Find 72 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCTAAGTCTATGGATTT+TGG 0.149807 1.4:+46753024 MS.gene42445:CDS
GTTCTAGGTATTGTGGTTTA+TGG 0.177810 1.4:+46752990 MS.gene42445:CDS
AGTTTGTGAAGCATAAAATT+AGG 0.188622 1.4:-46752509 None:intergenic
TAAATCTCTTGTTCTTAATA+TGG 0.213557 1.4:+46753105 MS.gene42445:CDS
CAATTTGCGTTCTTGTATAA+AGG 0.248296 1.4:+46752811 MS.gene42445:CDS
ATGATATTAATTATCGTTCT+AGG 0.251648 1.4:+46752975 MS.gene42445:CDS
TGTGGTTTATGGGTATTTAA+AGG 0.269077 1.4:+46753001 MS.gene42445:CDS
GGAGCAGTTCAGTTGATATA+TGG 0.270886 1.4:+46753047 MS.gene42445:CDS
TTAAAGGATTTCTAAGTCTA+TGG 0.273726 1.4:+46753017 MS.gene42445:CDS
GTTTGTGAAGCATAAAATTA+GGG 0.313564 1.4:-46752508 None:intergenic
TTAGCATCTTCTTATGATAT+AGG 0.315232 1.4:+46752890 MS.gene42445:CDS
CCGGTAACCTCACTAAGATT+TGG 0.343577 1.4:-46752286 None:intergenic
TGTTGTTGCCTTTCATTTAA+CGG 0.344853 1.4:+46752922 MS.gene42445:CDS
CTTTATACAAGAACGCAAAT+TGG 0.353151 1.4:-46752810 None:intergenic
TTCTAGGTATTGTGGTTTAT+GGG 0.353399 1.4:+46752991 MS.gene42445:CDS
GAACGATAATTAATATCATA+TGG 0.364926 1.4:-46752971 None:intergenic
CCAAATCTTAGTGAGGTTAC+CGG 0.387878 1.4:+46752286 MS.gene42445:CDS
AAAGCTATGGATCGAAATTC+AGG 0.391210 1.4:-46752443 None:intergenic
TGAATTTCGATCCATAGCTT+TGG 0.408425 1.4:+46752445 MS.gene42445:CDS
TCTTCAATGGGGCTATTCAT+TGG 0.417819 1.4:+46752867 MS.gene42445:CDS
AAACGTATAAGAGGCTTAAC+CGG 0.420175 1.4:-46752305 None:intergenic
AAATGATATGCTATCTCGCT+TGG 0.421001 1.4:+46752739 MS.gene42445:CDS
ACTTACTACTGTAAAGGTTC+AGG 0.421832 1.4:+46753247 MS.gene42445:CDS
CATATCTTATTAGTCCAGTA+TGG 0.426618 1.4:-46753198 None:intergenic
TCAATCTTGCTCACCGACAC+TGG 0.430359 1.4:-46753308 None:intergenic
GAAGTAGAGTCGGTCTTCAA+TGG 0.434386 1.4:+46752854 MS.gene42445:CDS
ACACATTTGAAACGTATAAG+AGG 0.434943 1.4:-46752314 None:intergenic
CGAGTCAAGGGACGATTACT+TGG 0.436172 1.4:+46752682 MS.gene42445:CDS
TTGAAGACCGACTCTACTTC+GGG 0.438270 1.4:-46752851 None:intergenic
AATACAATGTGCAGTCATCT+TGG 0.440641 1.4:+46753080 MS.gene42445:CDS
AAGTAGAGTCGGTCTTCAAT+GGG 0.449747 1.4:+46752855 MS.gene42445:CDS
AATGATATGCTATCTCGCTT+GGG 0.455231 1.4:+46752740 MS.gene42445:CDS
TCAAATGTGTTTCCAAGTCA+TGG 0.477371 1.4:+46752327 MS.gene42445:CDS
TTTCCTTTCCGTTAAATGAA+AGG 0.478785 1.4:-46752930 None:intergenic
AAATTAGGGTTGAGTAAAGT+AGG 0.479104 1.4:-46752494 None:intergenic
GTTGGAACAGATCGCCATAC+TGG 0.489948 1.4:+46753184 MS.gene42445:CDS
CAATCTTGCTCACCGACACT+GGG 0.493668 1.4:-46753307 None:intergenic
GAGCAGTTCAGTTGATATAT+GGG 0.496645 1.4:+46753048 MS.gene42445:CDS
AAACAATGAATCCAAAGCTA+TGG 0.500070 1.4:-46752456 None:intergenic
ATTGAAGACCGACTCTACTT+CGG 0.502974 1.4:-46752852 None:intergenic
AATTATCGTTCTAGGTATTG+TGG 0.505546 1.4:+46752983 MS.gene42445:CDS
TTGCCTTTCATTTAACGGAA+AGG 0.511796 1.4:+46752927 MS.gene42445:CDS
CTTCGGGATATCGAGAGAAC+GGG 0.513200 1.4:-46752835 None:intergenic
TTGCTTTCACTCCCCAGTGT+CGG 0.524546 1.4:+46753295 MS.gene42445:CDS
ACGCATGGAGACGGAGGCAG+AGG 0.524633 1.4:+46752229 None:intergenic
AACGATAATTAATATCATAT+GGG 0.528548 1.4:-46752970 None:intergenic
TTCAGTTGATATATGGGTGA+TGG 0.531884 1.4:+46753054 MS.gene42445:CDS
GAGCATACTTACTACTGTAA+AGG 0.532277 1.4:+46753241 MS.gene42445:CDS
AATTCATGAGGCAGATAAAG+TGG 0.532852 1.4:-46752257 None:intergenic
AGGTATTTGTTTGTGAACTC+CGG 0.539638 1.4:-46752615 None:intergenic
ATACAAGAACGCAAATTGGT+AGG 0.545547 1.4:-46752806 None:intergenic
GTCAAGGGACGATTACTTGG+TGG 0.552939 1.4:+46752685 MS.gene42445:CDS
CATGGAGACGGAGGCAGAGG+CGG 0.555640 1.4:+46752232 None:intergenic
TGTTTGTGAACTCCGGTGGA+TGG 0.577672 1.4:-46752608 None:intergenic
TACCTATGGAATCCATCCAC+CGG 0.579051 1.4:+46752596 MS.gene42445:CDS
AATAAGAGAAAACCATGACT+TGG 0.585230 1.4:-46752339 None:intergenic
TAAAGTAGGAGCAGAATGAT+CGG 0.587012 1.4:-46752480 None:intergenic
ACTTCGGGATATCGAGAGAA+CGG 0.592139 1.4:-46752836 None:intergenic
AAGCGGACGACGCATGGAGA+CGG 0.599515 1.4:+46752220 None:intergenic
TCGATATCCCGAAGTAGAGT+CGG 0.601494 1.4:+46752844 MS.gene42445:CDS
ATGATATGCTATCTCGCTTG+GGG 0.602714 1.4:+46752741 MS.gene42445:CDS
CGGACGACGCATGGAGACGG+AGG 0.604058 1.4:+46752223 None:intergenic
AAATGTGAATTTGCAAAACG+AGG 0.619142 1.4:-46752368 None:intergenic
TATTTGTTTGTGAACTCCGG+TGG 0.640963 1.4:-46752612 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.641792 1.4:-46752598 None:intergenic
TGATCGTCCAAATCTTAGTG+AGG 0.650291 1.4:+46752279 MS.gene42445:CDS
CTAATAAGATATGATGACGA+AGG 0.661647 1.4:+46753208 MS.gene42445:CDS
ATTTGGACGATCAATTCATG+AGG 0.662369 1.4:-46752269 None:intergenic
GGGGAGTGAAAGCAAAGACT+CGG 0.664282 1.4:-46753287 None:intergenic
TCTCATTGAGAGCTAATGCG+CGG 0.683598 1.4:+46752768 MS.gene42445:CDS
AGTAGAGTCGGTCTTCAATG+GGG 0.702070 1.4:+46752856 MS.gene42445:CDS
AATCTTGCTCACCGACACTG+GGG 0.727814 1.4:-46753306 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACGATAATTAATATCATAT+GGG - chr1.4:46752973-46752992 None:intergenic 15.0%
!!! TTTTCACATTTAAGATTTTA+TGG + chr1.4:46752647-46752666 MS.gene42445:CDS 15.0%
!! AAATGTGAAAAATTAGAACA+AGG - chr1.4:46752638-46752657 None:intergenic 20.0%
!! ATGATATTAATTATCGTTCT+AGG + chr1.4:46752975-46752994 MS.gene42445:CDS 20.0%
!! GAACGATAATTAATATCATA+TGG - chr1.4:46752974-46752993 None:intergenic 20.0%
!! TAAATCTCTTGTTCTTAATA+TGG + chr1.4:46753105-46753124 MS.gene42445:CDS 20.0%
!!! CATTTAAGATTTTATGGTTT+TGG + chr1.4:46752653-46752672 MS.gene42445:CDS 20.0%
!!! TGAGTTTTGAATATTATCAT+AGG - chr1.4:46752720-46752739 None:intergenic 20.0%
! AGTTTGTGAAGCATAAAATT+AGG - chr1.4:46752512-46752531 None:intergenic 25.0%
! GTTTGTGAAGCATAAAATTA+GGG - chr1.4:46752511-46752530 None:intergenic 25.0%
! TTAAAGGATTTCTAAGTCTA+TGG + chr1.4:46753017-46753036 MS.gene42445:CDS 25.0%
! TTAGCATCTTCTTATGATAT+AGG + chr1.4:46752890-46752909 MS.gene42445:CDS 25.0%
!! ATTTCTAAGTCTATGGATTT+TGG + chr1.4:46753024-46753043 MS.gene42445:CDS 25.0%
!! CTTGTTGATCTCAAAATTTT+AGG + chr1.4:46752530-46752549 MS.gene42445:CDS 25.0%
!! TTTCTAAGTCTATGGATTTT+GGG + chr1.4:46753025-46753044 MS.gene42445:CDS 25.0%
!!! AAAATTTTAGGTTCATGTAG+AGG + chr1.4:46752542-46752561 MS.gene42445:CDS 25.0%
!!! AAATTTTAGGTTCATGTAGA+GGG + chr1.4:46752543-46752562 MS.gene42445:CDS 25.0%
AAACAATGAATCCAAAGCTA+TGG - chr1.4:46752459-46752478 None:intergenic 30.0%
AAATGTGAATTTGCAAAACG+AGG - chr1.4:46752371-46752390 None:intergenic 30.0%
AAATTAGGGTTGAGTAAAGT+AGG - chr1.4:46752497-46752516 None:intergenic 30.0%
AACACATAGGAAAAATGCAA+GGG - chr1.4:46753144-46753163 None:intergenic 30.0%
AATAAGAGAAAACCATGACT+TGG - chr1.4:46752342-46752361 None:intergenic 30.0%
CAATTTGCGTTCTTGTATAA+AGG + chr1.4:46752811-46752830 MS.gene42445:CDS 30.0%
CATATCTTATTAGTCCAGTA+TGG - chr1.4:46753201-46753220 None:intergenic 30.0%
CCTATGTGTTGTACAAAAAA+TGG + chr1.4:46753154-46753173 MS.gene42445:CDS 30.0%
CTTTATACAAGAACGCAAAT+TGG - chr1.4:46752813-46752832 None:intergenic 30.0%
TGTGGTTTATGGGTATTTAA+AGG + chr1.4:46753001-46753020 MS.gene42445:CDS 30.0%
TGTTGTTGCCTTTCATTTAA+CGG + chr1.4:46752922-46752941 MS.gene42445:CDS 30.0%
TTTCCTTTCCGTTAAATGAA+AGG - chr1.4:46752933-46752952 None:intergenic 30.0%
! AATTATCGTTCTAGGTATTG+TGG + chr1.4:46752983-46753002 MS.gene42445:CDS 30.0%
! ACACATTTGAAACGTATAAG+AGG - chr1.4:46752317-46752336 None:intergenic 30.0%
! CTAATAAGATATGATGACGA+AGG + chr1.4:46753208-46753227 MS.gene42445:CDS 30.0%
! CTTCTTCAAACTTTTACCTA+TGG + chr1.4:46752582-46752601 MS.gene42445:CDS 30.0%
! TTCTAAGTCTATGGATTTTG+GGG + chr1.4:46753026-46753045 MS.gene42445:CDS 30.0%
! TTCTAGGTATTGTGGTTTAT+GGG + chr1.4:46752991-46753010 MS.gene42445:CDS 30.0%
!!! CCATTTTTTGTACAACACAT+AGG - chr1.4:46753157-46753176 None:intergenic 30.0%
AAACGTATAAGAGGCTTAAC+CGG - chr1.4:46752308-46752327 None:intergenic 35.0%
AAAGCTATGGATCGAAATTC+AGG - chr1.4:46752446-46752465 None:intergenic 35.0%
AAATGATATGCTATCTCGCT+TGG + chr1.4:46752739-46752758 MS.gene42445:CDS 35.0%
AATACAATGTGCAGTCATCT+TGG + chr1.4:46753080-46753099 MS.gene42445:CDS 35.0%
AATGATATGCTATCTCGCTT+GGG + chr1.4:46752740-46752759 MS.gene42445:CDS 35.0%
AATTCATGAGGCAGATAAAG+TGG - chr1.4:46752260-46752279 None:intergenic 35.0%
ACTTACTACTGTAAAGGTTC+AGG + chr1.4:46753247-46753266 MS.gene42445:CDS 35.0%
AGGTATTTGTTTGTGAACTC+CGG - chr1.4:46752618-46752637 None:intergenic 35.0%
ATACAAGAACGCAAATTGGT+AGG - chr1.4:46752809-46752828 None:intergenic 35.0%
ATTTGGACGATCAATTCATG+AGG - chr1.4:46752272-46752291 None:intergenic 35.0%
CAACACATAGGAAAAATGCA+AGG - chr1.4:46753145-46753164 None:intergenic 35.0%
GAGCATACTTACTACTGTAA+AGG + chr1.4:46753241-46753260 MS.gene42445:CDS 35.0%
TAAAGTAGGAGCAGAATGAT+CGG - chr1.4:46752483-46752502 None:intergenic 35.0%
TCAAATGTGTTTCCAAGTCA+TGG + chr1.4:46752327-46752346 MS.gene42445:CDS 35.0%
TGAATTTCGATCCATAGCTT+TGG + chr1.4:46752445-46752464 MS.gene42445:CDS 35.0%
TTGCCTTTCATTTAACGGAA+AGG + chr1.4:46752927-46752946 MS.gene42445:CDS 35.0%
! ACAAAAAATGGTGACGTTGT+TGG + chr1.4:46753166-46753185 MS.gene42445:CDS 35.0%
! GAGCAGTTCAGTTGATATAT+GGG + chr1.4:46753048-46753067 MS.gene42445:CDS 35.0%
! GTTCTAGGTATTGTGGTTTA+TGG + chr1.4:46752990-46753009 MS.gene42445:CDS 35.0%
! TTCAGTTGATATATGGGTGA+TGG + chr1.4:46753054-46753073 MS.gene42445:CDS 35.0%
! TTTTGGATATGACGAGTCAA+GGG + chr1.4:46752670-46752689 MS.gene42445:CDS 35.0%
AAGTAGAGTCGGTCTTCAAT+GGG + chr1.4:46752855-46752874 MS.gene42445:CDS 40.0%
ATGATATGCTATCTCGCTTG+GGG + chr1.4:46752741-46752760 MS.gene42445:CDS 40.0%
CCAAATCTTAGTGAGGTTAC+CGG + chr1.4:46752286-46752305 MS.gene42445:CDS 40.0%
GAAAAATGCAAGGGATGCAA+GGG - chr1.4:46753135-46753154 None:intergenic 40.0%
TATTTGTTTGTGAACTCCGG+TGG - chr1.4:46752615-46752634 None:intergenic 40.0%
TCTTCAATGGGGCTATTCAT+TGG + chr1.4:46752867-46752886 MS.gene42445:CDS 40.0%
TGATCGTCCAAATCTTAGTG+AGG + chr1.4:46752279-46752298 MS.gene42445:CDS 40.0%
! ATTGAAGACCGACTCTACTT+CGG - chr1.4:46752855-46752874 None:intergenic 40.0%
! GGAGCAGTTCAGTTGATATA+TGG + chr1.4:46753047-46753066 MS.gene42445:CDS 40.0%
!! GTTTTGGATATGACGAGTCA+AGG + chr1.4:46752669-46752688 MS.gene42445:CDS 40.0%
ACTTCGGGATATCGAGAGAA+CGG - chr1.4:46752839-46752858 None:intergenic 45.0%
AGTAGAGTCGGTCTTCAATG+GGG + chr1.4:46752856-46752875 MS.gene42445:CDS 45.0%
CCGGTAACCTCACTAAGATT+TGG - chr1.4:46752289-46752308 None:intergenic 45.0%
GAAGTAGAGTCGGTCTTCAA+TGG + chr1.4:46752854-46752873 MS.gene42445:CDS 45.0%
GGAAAAATGCAAGGGATGCA+AGG - chr1.4:46753136-46753155 None:intergenic 45.0%
TACCTATGGAATCCATCCAC+CGG + chr1.4:46752596-46752615 MS.gene42445:CDS 45.0%
TCGATATCCCGAAGTAGAGT+CGG + chr1.4:46752844-46752863 MS.gene42445:CDS 45.0%
TCTCATTGAGAGCTAATGCG+CGG + chr1.4:46752768-46752787 MS.gene42445:CDS 45.0%
! TTGAAGACCGACTCTACTTC+GGG - chr1.4:46752854-46752873 None:intergenic 45.0%
AATCTTGCTCACCGACACTG+GGG - chr1.4:46753309-46753328 None:intergenic 50.0%
CAATCTTGCTCACCGACACT+GGG - chr1.4:46753310-46753329 None:intergenic 50.0%
CGAGTCAAGGGACGATTACT+TGG + chr1.4:46752682-46752701 MS.gene42445:CDS 50.0%
CTTCGGGATATCGAGAGAAC+GGG - chr1.4:46752838-46752857 None:intergenic 50.0%
GGGGAGTGAAAGCAAAGACT+CGG - chr1.4:46753290-46753309 None:intergenic 50.0%
GTCAAGGGACGATTACTTGG+TGG + chr1.4:46752685-46752704 MS.gene42445:CDS 50.0%
GTTGGAACAGATCGCCATAC+TGG + chr1.4:46753184-46753203 MS.gene42445:CDS 50.0%
TCAATCTTGCTCACCGACAC+TGG - chr1.4:46753311-46753330 None:intergenic 50.0%
TGTTTGTGAACTCCGGTGGA+TGG - chr1.4:46752611-46752630 None:intergenic 50.0%
TTGCTTTCACTCCCCAGTGT+CGG + chr1.4:46753295-46753314 MS.gene42445:CDS 50.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr1.4:46752601-46752620 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 46752233 46753330 46752233 ID=MS.gene42445
chr1.4 mRNA 46752233 46753330 46752233 ID=MS.gene42445.t1;Parent=MS.gene42445
chr1.4 exon 46752233 46753330 46752233 ID=MS.gene42445.t1.exon1;Parent=MS.gene42445.t1
chr1.4 CDS 46752233 46753330 46752233 ID=cds.MS.gene42445.t1;Parent=MS.gene42445.t1
Gene Sequence

>MS.gene42445

ATGGAGACGGAGGCAGAGGCGGATCCACTTTATCTGCCTCATGAATTGATCGTCCAAATCTTAGTGAGGTTACCGGTTAAGCCTCTTATACGTTTCAAATGTGTTTCCAAGTCATGGTTTTCTCTTATTTCAAATCCTCGTTTTGCAAATTCACATTTTCAGATTACTACTGCAACTCACACTCGTCGAATTCTGTTCTTAACAGAAACTCCTGAATTTCGATCCATAGCTTTGGATTCATTGTTTACCGATCATTCTGCTCCTACTTTACTCAACCCTAATTTTATGCTTCACAAACTTGTTGATCTCAAAATTTTAGGTTCATGTAGAGGGTTCATGTTTTTGTACTCTTCTTCAAACTTTTACCTATGGAATCCATCCACCGGAGTTCACAAACAAATACCTTGTTCTAATTTTTCACATTTAAGATTTTATGGTTTTGGATATGACGAGTCAAGGGACGATTACTTGGTGGTTTCACTGTCCTATGATAATATTCAAAACTCAAATGATATGCTATCTCGCTTGGGGATTTTCTCATTGAGAGCTAATGCGCGGAACGAAATTGTGAGTCCTACCAATTTGCGTTCTTGTATAAAGGACCCGTTCTCTCGATATCCCGAAGTAGAGTCGGTCTTCAATGGGGCTATTCATTGGTTAGCATCTTCTTATGATATAGGTTTCTTTGCTGTTGTTGCCTTTCATTTAACGGAAAGGAAACTTGTAGATTTTTCTCTCCCATATGATATTAATTATCGTTCTAGGTATTGTGGTTTATGGGTATTTAAAGGATTTCTAAGTCTATGGATTTTGGGGAGCAGTTCAGTTGATATATGGGTGATGGAAGAATACAATGTGCAGTCATCTTGGACTAAATCTCTTGTTCTTAATATGGATATCCCTTGCATCCCTTGCATTTTTCCTATGTGTTGTACAAAAAATGGTGACGTTGTTGGAACAGATCGCCATACTGGACTAATAAGATATGATGACGAAGGAGAGTTTCTAGAGCATACTTACTACTGTAAAGGTTCAGGACGTGTGTCTATTTATACCGAGTCTTTGCTTTCACTCCCCAGTGTCGGTGAGCAAGATTGA

Protein sequence

>MS.gene42445.t1

METEAEADPLYLPHELIVQILVRLPVKPLIRFKCVSKSWFSLISNPRFANSHFQITTATHTRRILFLTETPEFRSIALDSLFTDHSAPTLLNPNFMLHKLVDLKILGSCRGFMFLYSSSNFYLWNPSTGVHKQIPCSNFSHLRFYGFGYDESRDDYLVVSLSYDNIQNSNDMLSRLGIFSLRANARNEIVSPTNLRSCIKDPFSRYPEVESVFNGAIHWLASSYDIGFFAVVAFHLTERKLVDFSLPYDINYRSRYCGLWVFKGFLSLWILGSSSVDIWVMEEYNVQSSWTKSLVLNMDIPCIPCIFPMCCTKNGDVVGTDRHTGLIRYDDEGEFLEHTYYCKGSGRVSIYTESLLSLPSVGEQD