Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033426.t1 | AET05189.1 | 69.8 | 255 | 73 | 3 | 163 | 415 | 70 | 322 | 2.50E-94 | 355.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033426.t1 | G7L7F6 | 69.8 | 255 | 73 | 3 | 163 | 415 | 70 | 322 | 1.8e-94 | 355.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033426.t1 | MTR_8g102520 | 69.531 | 256 | 74 | 3 | 162 | 415 | 69 | 322 | 1.10e-120 | 353 |
MS.gene033426.t1 | MTR_8g102520 | 47.849 | 186 | 49 | 3 | 1 | 138 | 106 | 291 | 2.10e-36 | 135 |
MS.gene033426.t1 | MTR_7g079400 | 58.947 | 285 | 109 | 4 | 137 | 415 | 55 | 337 | 5.05e-104 | 311 |
MS.gene033426.t1 | MTR_7g079400 | 45.699 | 186 | 53 | 3 | 1 | 138 | 117 | 302 | 1.41e-36 | 136 |
MS.gene033426.t1 | MTR_7g079370 | 54.007 | 287 | 119 | 5 | 139 | 413 | 69 | 354 | 3.38e-91 | 280 |
MS.gene033426.t1 | MTR_7g079370 | 40.957 | 188 | 59 | 4 | 2 | 138 | 139 | 325 | 3.98e-25 | 105 |
MS.gene033426.t1 | MTR_8g098830 | 63.536 | 181 | 62 | 2 | 211 | 389 | 22 | 200 | 2.08e-73 | 229 |
MS.gene033426.t1 | MTR_8g098830 | 48.588 | 177 | 40 | 5 | 17 | 145 | 27 | 200 | 1.46e-34 | 128 |
MS.gene033426.t1 | MTR_6g060650 | 47.619 | 273 | 129 | 7 | 148 | 414 | 108 | 372 | 2.78e-73 | 234 |
MS.gene033426.t1 | MTR_6g060650 | 33.333 | 189 | 65 | 9 | 2 | 138 | 164 | 343 | 1.10e-13 | 72.4 |
MS.gene033426.t1 | MTR_4g117720 | 46.465 | 297 | 139 | 9 | 128 | 411 | 84 | 373 | 2.77e-70 | 226 |
MS.gene033426.t1 | MTR_4g117720 | 32.979 | 188 | 68 | 7 | 2 | 138 | 162 | 342 | 2.28e-13 | 71.6 |
MS.gene033426.t1 | MTR_7g079450 | 76.259 | 139 | 30 | 2 | 277 | 415 | 2 | 137 | 3.00e-69 | 215 |
MS.gene033426.t1 | MTR_4g094365 | 47.241 | 290 | 131 | 11 | 137 | 415 | 86 | 364 | 1.01e-66 | 217 |
MS.gene033426.t1 | MTR_4g094365 | 33.158 | 190 | 64 | 8 | 2 | 138 | 155 | 334 | 1.94e-13 | 71.6 |
MS.gene033426.t1 | MTR_2g048580 | 47.719 | 285 | 115 | 9 | 137 | 415 | 86 | 342 | 1.07e-66 | 216 |
MS.gene033426.t1 | MTR_2g048580 | 40.659 | 182 | 66 | 4 | 21 | 160 | 154 | 335 | 3.44e-26 | 108 |
MS.gene033426.t1 | MTR_4g116330 | 46.667 | 270 | 130 | 7 | 151 | 415 | 120 | 380 | 3.22e-64 | 211 |
MS.gene033426.t1 | MTR_5g070080 | 45.455 | 275 | 135 | 8 | 148 | 415 | 120 | 386 | 1.03e-63 | 209 |
MS.gene033426.t1 | MTR_7g079420 | 46.209 | 277 | 97 | 6 | 154 | 415 | 905 | 1144 | 4.56e-62 | 217 |
MS.gene033426.t1 | MTR_7g079420 | 38.562 | 153 | 44 | 5 | 40 | 142 | 965 | 1117 | 1.29e-14 | 76.6 |
MS.gene033426.t1 | MTR_3g103020 | 44.816 | 299 | 147 | 10 | 128 | 415 | 87 | 378 | 8.79e-62 | 204 |
MS.gene033426.t1 | MTR_3g103020 | 32.620 | 187 | 70 | 6 | 4 | 138 | 166 | 348 | 4.14e-12 | 67.8 |
MS.gene033426.t1 | MTR_4g118380 | 46.304 | 257 | 116 | 8 | 146 | 387 | 108 | 357 | 3.48e-61 | 202 |
MS.gene033426.t1 | MTR_4g118380 | 34.021 | 194 | 66 | 8 | 2 | 138 | 166 | 354 | 2.04e-15 | 77.4 |
MS.gene033426.t1 | MTR_4g109280 | 44.718 | 284 | 146 | 7 | 137 | 415 | 82 | 359 | 9.57e-61 | 201 |
MS.gene033426.t1 | MTR_4g109280 | 32.620 | 187 | 68 | 8 | 3 | 138 | 148 | 327 | 4.31e-12 | 67.4 |
MS.gene033426.t1 | MTR_4g023080 | 43.206 | 287 | 140 | 8 | 128 | 408 | 78 | 347 | 1.29e-60 | 201 |
MS.gene033426.t1 | MTR_4g122850 | 41.414 | 297 | 161 | 8 | 128 | 415 | 72 | 364 | 2.62e-60 | 201 |
MS.gene033426.t1 | MTR_3g034180 | 42.581 | 310 | 142 | 12 | 128 | 414 | 192 | 488 | 1.93e-59 | 201 |
MS.gene033426.t1 | MTR_3g034180 | 30.256 | 195 | 73 | 8 | 2 | 138 | 270 | 459 | 1.34e-11 | 66.6 |
MS.gene033426.t1 | MTR_4g117850 | 42.652 | 279 | 143 | 10 | 142 | 411 | 106 | 376 | 1.02e-58 | 196 |
MS.gene033426.t1 | MTR_5g070088 | 43.956 | 273 | 140 | 8 | 146 | 411 | 115 | 381 | 9.02e-58 | 194 |
MS.gene033426.t1 | MTR_4g023130 | 44.231 | 260 | 124 | 7 | 153 | 408 | 64 | 306 | 1.06e-57 | 192 |
MS.gene033426.t1 | MTR_5g070130 | 43.448 | 290 | 142 | 11 | 137 | 411 | 90 | 372 | 1.21e-57 | 194 |
MS.gene033426.t1 | MTR_4g109270 | 41.137 | 299 | 153 | 9 | 128 | 415 | 78 | 364 | 6.81e-57 | 191 |
MS.gene033426.t1 | MTR_8g433040 | 42.756 | 283 | 132 | 9 | 143 | 415 | 102 | 364 | 1.15e-56 | 191 |
MS.gene033426.t1 | MTR_8g032380 | 42.756 | 283 | 132 | 9 | 143 | 415 | 102 | 364 | 1.15e-56 | 191 |
MS.gene033426.t1 | MTR_1g055135 | 40.702 | 285 | 156 | 6 | 139 | 415 | 96 | 375 | 1.69e-56 | 190 |
MS.gene033426.t1 | MTR_1g055195 | 41.216 | 296 | 136 | 12 | 136 | 415 | 205 | 478 | 6.85e-56 | 192 |
MS.gene033426.t1 | MTR_4g021785 | 41.971 | 274 | 139 | 8 | 146 | 415 | 98 | 355 | 6.34e-55 | 186 |
MS.gene033426.t1 | MTR_3g034130 | 42.500 | 280 | 135 | 11 | 128 | 388 | 78 | 350 | 9.49e-55 | 186 |
MS.gene033426.t1 | MTR_4g023190 | 42.857 | 301 | 135 | 11 | 128 | 413 | 79 | 357 | 1.06e-54 | 185 |
MS.gene033426.t1 | MTR_5g097210 | 41.455 | 275 | 151 | 8 | 140 | 410 | 90 | 358 | 1.12e-54 | 186 |
MS.gene033426.t1 | MTR_4g117770 | 43.299 | 291 | 142 | 10 | 137 | 415 | 88 | 367 | 3.59e-54 | 184 |
MS.gene033426.t1 | MTR_4g117810 | 43.299 | 291 | 142 | 10 | 137 | 415 | 88 | 367 | 3.59e-54 | 184 |
MS.gene033426.t1 | MTR_4g117780 | 41.924 | 291 | 146 | 10 | 137 | 415 | 88 | 367 | 5.14e-54 | 184 |
MS.gene033426.t1 | MTR_8g032390 | 42.697 | 267 | 137 | 7 | 153 | 411 | 113 | 371 | 6.33e-54 | 184 |
MS.gene033426.t1 | MTR_8g032390 | 33.862 | 189 | 66 | 6 | 3 | 138 | 165 | 347 | 9.01e-15 | 75.9 |
MS.gene033426.t1 | MTR_3g034160 | 40.645 | 310 | 148 | 12 | 128 | 414 | 78 | 374 | 1.33e-53 | 183 |
MS.gene033426.t1 | MTR_4g118400 | 39.275 | 331 | 139 | 17 | 97 | 409 | 8 | 294 | 4.97e-53 | 179 |
MS.gene033426.t1 | MTR_4g023090 | 38.650 | 326 | 155 | 12 | 113 | 409 | 69 | 378 | 1.43e-52 | 180 |
MS.gene033426.t1 | MTR_4g023120 | 40.972 | 288 | 143 | 10 | 146 | 415 | 92 | 370 | 3.73e-51 | 176 |
MS.gene033426.t1 | MTR_4g023070 | 40.550 | 291 | 138 | 10 | 146 | 414 | 92 | 369 | 4.75e-51 | 176 |
MS.gene033426.t1 | MTR_4g023150 | 41.472 | 299 | 143 | 11 | 128 | 413 | 79 | 358 | 7.72e-51 | 175 |
MS.gene033426.t1 | MTR_4g117750 | 42.049 | 283 | 145 | 9 | 143 | 414 | 84 | 358 | 1.40e-50 | 177 |
MS.gene033426.t1 | MTR_4g117750 | 41.912 | 136 | 61 | 6 | 288 | 409 | 346 | 477 | 6.45e-17 | 82.8 |
MS.gene033426.t1 | MTR_4g023200 | 40.728 | 302 | 141 | 11 | 128 | 413 | 79 | 358 | 1.41e-49 | 172 |
MS.gene033426.t1 | MTR_4g116330 | 41.111 | 270 | 106 | 8 | 151 | 415 | 120 | 341 | 2.14e-47 | 166 |
MS.gene033426.t1 | MTR_4g118370 | 39.922 | 258 | 130 | 6 | 157 | 412 | 23 | 257 | 2.61e-46 | 160 |
MS.gene033426.t1 | MTR_4g023380 | 38.514 | 296 | 124 | 10 | 144 | 409 | 104 | 371 | 3.10e-46 | 163 |
MS.gene033426.t1 | MTR_8g433030 | 44.444 | 225 | 113 | 6 | 191 | 411 | 122 | 338 | 5.21e-46 | 162 |
MS.gene033426.t1 | MTR_8g433030 | 33.862 | 189 | 66 | 6 | 3 | 138 | 132 | 314 | 6.41e-15 | 75.9 |
MS.gene033426.t1 | MTR_4g117870 | 38.851 | 296 | 130 | 11 | 128 | 415 | 15 | 267 | 2.42e-45 | 158 |
MS.gene033426.t1 | MTR_1g055175 | 41.414 | 198 | 113 | 3 | 220 | 415 | 5 | 201 | 4.49e-43 | 150 |
MS.gene033426.t1 | MTR_1g055175 | 30.435 | 184 | 72 | 5 | 21 | 150 | 5 | 186 | 2.52e-14 | 71.6 |
MS.gene033426.t1 | MTR_4g023440 | 38.182 | 275 | 120 | 8 | 143 | 415 | 106 | 332 | 2.47e-42 | 152 |
MS.gene033426.t1 | MTR_4g116320 | 43.256 | 215 | 114 | 5 | 198 | 409 | 43 | 252 | 5.66e-42 | 149 |
MS.gene033426.t1 | MTR_1g055165 | 34.694 | 294 | 123 | 8 | 128 | 415 | 88 | 318 | 1.42e-40 | 147 |
MS.gene033426.t1 | MTR_8g040935 | 42.714 | 199 | 103 | 7 | 224 | 415 | 14 | 208 | 1.89e-39 | 140 |
MS.gene033426.t1 | MTR_4g117530 | 39.301 | 229 | 90 | 8 | 190 | 415 | 71 | 253 | 1.11e-37 | 137 |
MS.gene033426.t1 | MTR_4g121580 | 39.777 | 269 | 114 | 15 | 148 | 405 | 108 | 339 | 7.20e-37 | 139 |
MS.gene033426.t1 | MTR_6g463430 | 42.051 | 195 | 102 | 7 | 224 | 415 | 16 | 202 | 2.98e-35 | 129 |
MS.gene033426.t1 | MTR_8g013010 | 44.571 | 175 | 83 | 6 | 146 | 316 | 145 | 309 | 4.24e-33 | 127 |
MS.gene033426.t1 | MTR_1g055250 | 36.100 | 241 | 145 | 7 | 173 | 408 | 27 | 263 | 5.86e-32 | 124 |
MS.gene033426.t1 | MTR_4g117430 | 42.208 | 154 | 75 | 4 | 163 | 315 | 11 | 151 | 7.11e-32 | 119 |
MS.gene033426.t1 | MTR_4g114700 | 35.115 | 262 | 108 | 8 | 155 | 406 | 9 | 218 | 4.28e-30 | 116 |
MS.gene033426.t1 | MTR_4g118360 | 49.587 | 121 | 57 | 3 | 292 | 409 | 1 | 120 | 3.50e-27 | 105 |
MS.gene033426.t1 | MTR_4g116340 | 43.836 | 146 | 61 | 5 | 148 | 282 | 112 | 247 | 2.96e-25 | 103 |
MS.gene033426.t1 | MTR_2g024110 | 27.984 | 243 | 146 | 9 | 137 | 359 | 79 | 312 | 8.35e-23 | 99.4 |
MS.gene033426.t1 | MTR_5g069120 | 51.887 | 106 | 40 | 3 | 139 | 233 | 73 | 178 | 1.56e-22 | 94.4 |
MS.gene033426.t1 | MTR_5g023000 | 52.632 | 95 | 39 | 4 | 324 | 415 | 8 | 99 | 3.04e-21 | 88.2 |
MS.gene033426.t1 | MTR_1g068860 | 28.634 | 227 | 132 | 5 | 134 | 340 | 73 | 289 | 5.98e-21 | 94.0 |
MS.gene033426.t1 | MTR_1g068875 | 28.137 | 263 | 151 | 8 | 129 | 364 | 63 | 314 | 7.18e-21 | 94.0 |
MS.gene033426.t1 | MTR_4g133170 | 30.263 | 228 | 134 | 10 | 130 | 340 | 66 | 285 | 1.82e-20 | 92.8 |
MS.gene033426.t1 | MTR_4g122860 | 36.224 | 196 | 84 | 9 | 229 | 415 | 157 | 320 | 4.08e-20 | 91.3 |
MS.gene033426.t1 | MTR_7g117720 | 53.125 | 96 | 41 | 2 | 319 | 410 | 177 | 272 | 1.31e-19 | 88.6 |
MS.gene033426.t1 | MTR_7g117720 | 46.721 | 122 | 48 | 5 | 131 | 240 | 64 | 180 | 3.93e-18 | 84.3 |
MS.gene033426.t1 | MTR_2g031640 | 28.014 | 282 | 171 | 9 | 147 | 406 | 87 | 358 | 6.05e-19 | 88.2 |
MS.gene033426.t1 | MTR_1g068835 | 26.523 | 279 | 156 | 9 | 129 | 383 | 63 | 316 | 7.47e-19 | 88.2 |
MS.gene033426.t1 | MTR_2g028130 | 26.829 | 246 | 145 | 8 | 147 | 364 | 101 | 339 | 7.55e-19 | 88.2 |
MS.gene033426.t1 | MTR_2g026010 | 27.755 | 245 | 142 | 10 | 147 | 364 | 85 | 321 | 5.98e-18 | 85.5 |
MS.gene033426.t1 | MTR_0667s0010 | 27.027 | 259 | 151 | 8 | 137 | 364 | 79 | 330 | 8.98e-18 | 85.1 |
MS.gene033426.t1 | MTR_6g034720 | 46.552 | 116 | 53 | 4 | 178 | 288 | 53 | 164 | 5.18e-17 | 79.7 |
MS.gene033426.t1 | MTR_2g025960 | 27.935 | 247 | 132 | 12 | 152 | 364 | 5 | 239 | 1.06e-16 | 80.9 |
MS.gene033426.t1 | MTR_2g028140 | 26.562 | 256 | 148 | 9 | 117 | 340 | 70 | 317 | 1.21e-16 | 81.6 |
MS.gene033426.t1 | MTR_3g083010 | 26.984 | 315 | 185 | 11 | 133 | 409 | 88 | 395 | 1.27e-16 | 81.6 |
MS.gene033426.t1 | MTR_2g024100 | 27.490 | 251 | 142 | 9 | 147 | 364 | 91 | 334 | 1.32e-16 | 81.6 |
MS.gene033426.t1 | MTR_2g028160 | 26.054 | 261 | 156 | 9 | 134 | 364 | 88 | 341 | 6.71e-16 | 79.3 |
MS.gene033426.t1 | MTR_6g021880 | 25.746 | 268 | 178 | 8 | 153 | 407 | 122 | 381 | 1.07e-15 | 78.6 |
MS.gene033426.t1 | MTR_2g021050 | 27.236 | 246 | 149 | 8 | 137 | 364 | 77 | 310 | 2.07e-15 | 77.8 |
MS.gene033426.t1 | MTR_3g009310 | 30.000 | 180 | 112 | 6 | 168 | 345 | 160 | 327 | 2.78e-15 | 77.4 |
MS.gene033426.t1 | MTR_2g025420 | 27.823 | 248 | 131 | 12 | 152 | 361 | 106 | 343 | 3.49e-15 | 77.4 |
MS.gene033426.t1 | MTR_4g070550 | 28.378 | 222 | 123 | 7 | 148 | 340 | 97 | 311 | 6.04e-15 | 76.6 |
MS.gene033426.t1 | MTR_8g467140 | 31.068 | 206 | 127 | 8 | 141 | 340 | 117 | 313 | 8.43e-15 | 75.5 |
MS.gene033426.t1 | MTR_3g013740 | 30.660 | 212 | 118 | 11 | 152 | 348 | 149 | 346 | 1.32e-14 | 75.5 |
MS.gene033426.t1 | MTR_2g031720 | 26.953 | 256 | 158 | 7 | 152 | 385 | 96 | 344 | 5.27e-14 | 73.6 |
MS.gene033426.t1 | MTR_7g055870 | 25.904 | 332 | 170 | 15 | 138 | 407 | 107 | 424 | 5.47e-14 | 73.6 |
MS.gene033426.t1 | MTR_2g426070 | 26.389 | 216 | 129 | 6 | 148 | 340 | 101 | 309 | 7.69e-14 | 73.2 |
MS.gene033426.t1 | MTR_2g028110 | 28.319 | 226 | 133 | 10 | 137 | 340 | 75 | 293 | 1.08e-13 | 72.4 |
MS.gene033426.t1 | MTR_8g099460 | 24.380 | 242 | 145 | 7 | 141 | 359 | 82 | 308 | 2.10e-13 | 71.6 |
MS.gene033426.t1 | MTR_2g055970 | 30.288 | 208 | 126 | 8 | 141 | 340 | 296 | 492 | 2.14e-13 | 72.4 |
MS.gene033426.t1 | MTR_3g024110 | 28.218 | 202 | 125 | 9 | 153 | 351 | 202 | 386 | 3.49e-13 | 71.2 |
MS.gene033426.t1 | MTR_4g019990 | 27.347 | 245 | 137 | 9 | 141 | 355 | 92 | 325 | 6.09e-13 | 70.1 |
MS.gene033426.t1 | MTR_7g013590 | 26.408 | 284 | 171 | 13 | 153 | 407 | 129 | 403 | 8.17e-13 | 70.1 |
MS.gene033426.t1 | MTR_4g108820 | 29.412 | 204 | 125 | 8 | 142 | 342 | 99 | 286 | 8.50e-13 | 69.3 |
MS.gene033426.t1 | MTR_7g066040 | 26.776 | 183 | 106 | 4 | 146 | 300 | 21 | 203 | 1.00e-12 | 68.2 |
MS.gene033426.t1 | MTR_3g009240 | 26.190 | 210 | 121 | 8 | 152 | 346 | 128 | 318 | 1.35e-12 | 69.3 |
MS.gene033426.t1 | MTR_2g031680 | 25.424 | 236 | 145 | 6 | 148 | 361 | 87 | 313 | 1.73e-12 | 68.9 |
MS.gene033426.t1 | MTR_3g006670 | 31.188 | 202 | 111 | 10 | 152 | 340 | 146 | 332 | 1.89e-12 | 68.9 |
MS.gene033426.t1 | MTR_4g055060 | 28.767 | 219 | 120 | 12 | 146 | 345 | 121 | 322 | 2.21e-12 | 68.6 |
MS.gene033426.t1 | MTR_3g010390 | 27.727 | 220 | 134 | 10 | 152 | 355 | 136 | 346 | 4.74e-12 | 67.8 |
MS.gene033426.t1 | MTR_4g030980 | 25.103 | 243 | 131 | 9 | 144 | 346 | 124 | 355 | 5.37e-12 | 67.4 |
MS.gene033426.t1 | MTR_4g129160 | 25.792 | 221 | 132 | 7 | 150 | 346 | 119 | 331 | 1.05e-11 | 66.2 |
MS.gene033426.t1 | MTR_1g097330 | 28.713 | 202 | 118 | 7 | 150 | 340 | 107 | 293 | 1.23e-11 | 66.2 |
MS.gene033426.t1 | MTR_1g055200 | 42.857 | 84 | 43 | 3 | 152 | 233 | 6 | 86 | 1.47e-11 | 61.2 |
MS.gene033426.t1 | MTR_2g078870 | 24.103 | 195 | 121 | 7 | 153 | 340 | 58 | 232 | 2.38e-11 | 64.7 |
MS.gene033426.t1 | MTR_3g010970 | 26.592 | 267 | 156 | 13 | 152 | 407 | 154 | 391 | 2.54e-11 | 65.5 |
MS.gene033426.t1 | MTR_7g056503 | 27.149 | 221 | 130 | 11 | 149 | 346 | 116 | 328 | 2.63e-11 | 65.5 |
MS.gene033426.t1 | MTR_6g007150 | 26.961 | 204 | 133 | 8 | 146 | 340 | 65 | 261 | 2.65e-11 | 65.1 |
MS.gene033426.t1 | MTR_5g057790 | 26.761 | 213 | 128 | 9 | 152 | 352 | 142 | 338 | 3.20e-11 | 65.1 |
MS.gene033426.t1 | MTR_7g055830 | 24.272 | 309 | 167 | 13 | 154 | 407 | 60 | 356 | 3.44e-11 | 64.7 |
MS.gene033426.t1 | MTR_6g007135 | 25.346 | 217 | 144 | 8 | 146 | 352 | 120 | 328 | 4.60e-11 | 64.3 |
MS.gene033426.t1 | MTR_4g027370 | 26.496 | 234 | 148 | 11 | 131 | 348 | 150 | 375 | 4.64e-11 | 65.1 |
MS.gene033426.t1 | MTR_3g024130 | 25.962 | 208 | 130 | 9 | 150 | 346 | 58 | 252 | 4.82e-11 | 63.9 |
MS.gene033426.t1 | MTR_0267s0050 | 26.106 | 226 | 123 | 12 | 169 | 364 | 130 | 341 | 5.20e-11 | 64.3 |
MS.gene033426.t1 | MTR_7g009265 | 26.577 | 222 | 133 | 9 | 149 | 346 | 30 | 245 | 5.44e-11 | 63.9 |
MS.gene033426.t1 | MTR_3g083640 | 25.381 | 197 | 127 | 8 | 153 | 346 | 157 | 336 | 6.17e-11 | 64.3 |
MS.gene033426.t1 | MTR_2g425980 | 28.311 | 219 | 119 | 8 | 152 | 340 | 98 | 308 | 7.13e-11 | 63.9 |
MS.gene033426.t1 | MTR_6g017305 | 24.783 | 230 | 136 | 8 | 166 | 364 | 15 | 238 | 7.16e-11 | 63.2 |
MS.gene033426.t1 | MTR_5g057710 | 26.667 | 210 | 126 | 11 | 152 | 349 | 142 | 335 | 7.79e-11 | 63.9 |
MS.gene033426.t1 | MTR_3g013770 | 25.714 | 245 | 148 | 10 | 150 | 385 | 132 | 351 | 8.76e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033426.t1 | AT3G06240 | 28.000 | 250 | 146 | 12 | 103 | 340 | 127 | 354 | 3.31e-13 | 71.2 |
Find 89 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTATTGCCTTTGATTTAA+AGG | 0.116438 | 7.2:+26165907 | MS.gene033426:CDS |
AATTATGATTTGATGGTATT+TGG | 0.157846 | 7.2:+26164370 | MS.gene033426:CDS |
CGATGATTACATGGTAGTTT+TGG | 0.181143 | 7.2:+26165676 | MS.gene033426:CDS |
CTGCTTCTGATTTGCCTTAT+AGG | 0.209679 | 7.2:+26165789 | MS.gene033426:CDS |
CCCGGATATCGTCTTGAAAT+TGG | 0.219081 | 7.2:+26165503 | MS.gene033426:CDS |
CAACTTGACAGTATATTTAT+TGG | 0.228507 | 7.2:-26165624 | None:intergenic |
TTGCTTCTGATTTGCTTTAT+AGG | 0.235745 | 7.2:+26164188 | MS.gene033426:CDS |
AGATGATTACATTGTAGTTT+TGG | 0.238202 | 7.2:+26164078 | MS.gene033426:CDS |
GGCAATAATAACATTGCTTT+TGG | 0.240132 | 7.2:-26165894 | None:intergenic |
GTTTATGATTTGATGGTATT+TGG | 0.262482 | 7.2:+26165983 | MS.gene033426:CDS |
TCTCCTGTAATTGTATTTGA+TGG | 0.267546 | 7.2:-26165702 | None:intergenic |
CACAACTTGTAAAGCATATT+GGG | 0.268178 | 7.2:-26166132 | None:intergenic |
TTTCCTCCTGTAATATTTGA+TGG | 0.269103 | 7.2:-26164104 | None:intergenic |
CCACAACTTGTAAAGCATAT+TGG | 0.287389 | 7.2:-26166133 | None:intergenic |
GAGTTTGCAGTCTTCCTATA+AGG | 0.303546 | 7.2:-26165803 | None:intergenic |
TCTTGAATGGTTCTATTCAT+TGG | 0.308230 | 7.2:+26164251 | MS.gene033426:CDS |
TCATAGAAATTATGATTTGA+TGG | 0.315173 | 7.2:+26164363 | MS.gene033426:CDS |
GACAGTATATTTATTGGAAT+TGG | 0.320897 | 7.2:-26165618 | None:intergenic |
ATTCAAGAACGACCCGACTA+TGG | 0.322369 | 7.2:-26164236 | None:intergenic |
TCCAATTTCAAGACGATATC+CGG | 0.323683 | 7.2:-26165504 | None:intergenic |
GTCAAGTTGCTCCATGGTTT+CGG | 0.329750 | 7.2:+26165638 | MS.gene033426:CDS |
AGTGGTCTAAAATTAAGATA+TGG | 0.333038 | 7.2:+26166032 | MS.gene033426:CDS |
ACTCTATATACACCGTTGTT+TGG | 0.341638 | 7.2:-26166261 | None:intergenic |
CTCTATATACACCGTTGTTT+GGG | 0.346270 | 7.2:-26166260 | None:intergenic |
GATCCATCAAATACAATTAC+AGG | 0.354038 | 7.2:+26165699 | MS.gene033426:CDS |
TGTCATTTCCTTTAAATCAA+TGG | 0.363707 | 7.2:-26164296 | None:intergenic |
TCTTGAATGATTCAATTCAT+TGG | 0.364268 | 7.2:+26165852 | MS.gene033426:CDS |
AATTTATGTTTATGATTTGA+TGG | 0.366734 | 7.2:+26165976 | MS.gene033426:CDS |
TGGGGTCCATCAAATATTAC+AGG | 0.369256 | 7.2:+26164098 | MS.gene033426:CDS |
GAATGGTTCTATTCATTGGC+TGG | 0.382596 | 7.2:+26164255 | MS.gene033426:CDS |
GGACCAGATGCTGCTGCTGC+TGG | 0.385125 | 7.2:+26166166 | MS.gene033426:CDS |
TAAGCTTGCTCAGCGCCATC+AGG | 0.389919 | 7.2:-26166298 | None:intergenic |
GAATGATTCAATTCATTGGC+TGG | 0.410655 | 7.2:+26165856 | MS.gene033426:CDS |
AATACAAAGTTCATTCATCT+TGG | 0.418592 | 7.2:+26166065 | MS.gene033426:CDS |
ATATCACTATCAAAATAATC+TGG | 0.420762 | 7.2:-26164337 | None:intergenic |
ACAAGTTGTGGTGATATAGT+TGG | 0.420850 | 7.2:+26164532 | MS.gene033426:intron |
ACAAGTTGTGGTGATATAGT+TGG | 0.420850 | 7.2:+26166145 | MS.gene033426:CDS |
CTGAAGTTGGTCCCACTGTC+GGG | 0.442666 | 7.2:+26165825 | MS.gene033426:CDS |
CCAATATGCTTTACAAGTTG+TGG | 0.444016 | 7.2:+26166133 | MS.gene033426:CDS |
AATCCAGCAGCAGCAGCATC+TGG | 0.445648 | 7.2:-26166169 | None:intergenic |
TTGGCGGACTTATCAGTGTA+TGG | 0.447839 | 7.2:+26166002 | MS.gene033426:CDS |
ATTCCACGAGAAAAGTCATC+TGG | 0.461053 | 7.2:-26165956 | None:intergenic |
TTGGCGGACTTATCAGTGTA+TGG | 0.462616 | 7.2:+26164389 | MS.gene033426:CDS |
TCTCATTGAGAGCTAATAAG+TGG | 0.462649 | 7.2:+26165753 | MS.gene033426:CDS |
TGGACACAGGTATTTGTTTG+TGG | 0.464302 | 7.2:-26165598 | None:intergenic |
GCTAATCCAACAGCAGCATC+TGG | 0.470596 | 7.2:-26164556 | None:intergenic |
TCTCATTGAGAGCTAATAAG+TGG | 0.471707 | 7.2:+26164152 | MS.gene033426:CDS |
ATAGTCGGGTCGTTCTTGAA+TGG | 0.471817 | 7.2:+26164238 | MS.gene033426:CDS |
CTGAAGTTGGTCCCATAGTC+GGG | 0.472332 | 7.2:+26164224 | MS.gene033426:CDS |
CATGTCATGCGATGATTACA+TGG | 0.483030 | 7.2:+26165667 | MS.gene033426:CDS |
GAAAACTAGCTCAATTGAGT+TGG | 0.498600 | 7.2:+26164123 | MS.gene033426:CDS |
GTGGTCTAAAATTAAGATAT+GGG | 0.498669 | 7.2:+26166033 | MS.gene033426:CDS |
TATGATTTGATGGTATTTGG+CGG | 0.504914 | 7.2:+26164373 | MS.gene033426:CDS |
CTGCTAGAGTATCACTCCTA+TGG | 0.531482 | 7.2:+26166217 | MS.gene033426:CDS |
TCTGAAGTTGGTCCCATAGT+CGG | 0.531749 | 7.2:+26164223 | MS.gene033426:CDS |
ATCAAATCATAATTTCTATG+AGG | 0.536641 | 7.2:-26164361 | None:intergenic |
TCTGAAGTTGGTCCCACTGT+CGG | 0.539178 | 7.2:+26165824 | MS.gene033426:CDS |
AAATTGGAGGTTCATGTAGA+GGG | 0.540287 | 7.2:+26165519 | MS.gene033426:CDS |
TTCAAGAACGACCCGACTAT+GGG | 0.546092 | 7.2:-26164235 | None:intergenic |
AAGACTGCAAACTCTGAAGT+TGG | 0.550215 | 7.2:+26165812 | MS.gene033426:CDS |
GTTACCGTGACTTCTACATA+TGG | 0.551509 | 7.2:+26165558 | MS.gene033426:CDS |
TATGATTTGATGGTATTTGG+CGG | 0.556414 | 7.2:+26165986 | MS.gene033426:CDS |
GAAATTGGAGGTTCATGTAG+AGG | 0.559310 | 7.2:+26165518 | MS.gene033426:CDS |
AGGTATTTGTTTGTGGACAC+CGG | 0.565436 | 7.2:-26165591 | None:intergenic |
TATACTGTCAAGTTGCTCCA+TGG | 0.571063 | 7.2:+26165632 | MS.gene033426:CDS |
GTTGGACCAGATGCTGCTGT+TGG | 0.573521 | 7.2:+26164550 | MS.gene033426:CDS |
AAGACTTCAAGCTCTGAAGT+TGG | 0.574735 | 7.2:+26164211 | MS.gene033426:CDS |
TATTTATTGGAATTGGACAC+AGG | 0.578736 | 7.2:-26165611 | None:intergenic |
GGATATCGTCTTGAAATTGG+AGG | 0.580944 | 7.2:+26165506 | MS.gene033426:CDS |
TGTTTGTGGACACCGGTGGA+TGG | 0.596919 | 7.2:-26165584 | None:intergenic |
TTTATAATAAGAGTCGCCAT+AGG | 0.597411 | 7.2:-26166233 | None:intergenic |
TACATATGGAATCCATCCAC+CGG | 0.606136 | 7.2:+26165572 | MS.gene033426:CDS |
CCAATTTCAAGACGATATCC+GGG | 0.607059 | 7.2:-26165503 | None:intergenic |
TCTCTACTTTCACTCCCTGA+TGG | 0.614093 | 7.2:+26166283 | MS.gene033426:CDS |
TTCAAGAATGACCCGACAGT+GGG | 0.615485 | 7.2:-26165836 | None:intergenic |
AAGCTTGCTCAGCGCCATCA+GGG | 0.627984 | 7.2:-26166297 | None:intergenic |
ACATGTCGTATCCGAAACCA+TGG | 0.636880 | 7.2:-26165649 | None:intergenic |
TAATAAGTGGAATCAAGTTG+AGG | 0.637096 | 7.2:+26164165 | MS.gene033426:CDS |
GATTCCATATGTAGAAGTCA+CGG | 0.645903 | 7.2:-26165562 | None:intergenic |
TATTTGTTTGTGGACACCGG+TGG | 0.649383 | 7.2:-26165588 | None:intergenic |
ACAACTTGTAAAGCATATTG+GGG | 0.651604 | 7.2:-26166131 | None:intergenic |
TAATAAGTGGAAACAAGTTG+AGG | 0.653574 | 7.2:+26165766 | MS.gene033426:CDS |
TTAGCGAAGCTTAATGACAA+AGG | 0.665656 | 7.2:+26164574 | MS.gene033426:CDS |
TTAGCGAAGCTTAATGACAA+AGG | 0.665656 | 7.2:+26166190 | MS.gene033426:CDS |
TCAGTGTATGGAATATCGAG+TGG | 0.672882 | 7.2:+26166014 | MS.gene033426:CDS |
ATTCAAGAATGACCCGACAG+TGG | 0.672977 | 7.2:-26165837 | None:intergenic |
GGTCCATCAAATATTACAGG+AGG | 0.673364 | 7.2:+26164101 | MS.gene033426:CDS |
TTATAAAAGATCCCAAACAA+CGG | 0.694683 | 7.2:+26166249 | MS.gene033426:CDS |
TTTCAAGACGATATCCGGGA+CGG | 0.696402 | 7.2:-26165499 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTATGTTTATGATTTGA+TGG | + | chr7.2:26165976-26165995 | MS.gene033426:CDS | 15.0% |
!!! | ATAGGTTTAAAATTAAGATA+TGG | + | chr7.2:26164419-26164438 | MS.gene033426:intron | 15.0% |
!!! | TAGGTTTAAAATTAAGATAT+GGG | + | chr7.2:26164420-26164439 | MS.gene033426:intron | 15.0% |
!! | ATATCACTATCAAAATAATC+TGG | - | chr7.2:26164340-26164359 | None:intergenic | 20.0% |
!! | ATCAAATCATAATTTCTATG+AGG | - | chr7.2:26164364-26164383 | None:intergenic | 20.0% |
!! | ATGCATTAAAATCTATTGAT+AGG | - | chr7.2:26165433-26165452 | None:intergenic | 20.0% |
!! | CAAGATAAATATCAGTAAAA+TGG | - | chr7.2:26164762-26164781 | None:intergenic | 20.0% |
!! | TCATAGAAATTATGATTTGA+TGG | + | chr7.2:26164363-26164382 | MS.gene033426:CDS | 20.0% |
!! | TGCATTAAAATCTATTGATA+GGG | - | chr7.2:26165432-26165451 | None:intergenic | 20.0% |
!!! | AATTATGATTTGATGGTATT+TGG | + | chr7.2:26164370-26164389 | MS.gene033426:CDS | 20.0% |
!!! | ACAAAGTCAAATTTTAAGTT+GGG | + | chr7.2:26164995-26165014 | MS.gene033426:intron | 20.0% |
!!! | TACAAAGTCAAATTTTAAGT+TGG | + | chr7.2:26164994-26165013 | MS.gene033426:intron | 20.0% |
!!! | TATTATTGCCTTTGATTTAA+AGG | + | chr7.2:26165907-26165926 | MS.gene033426:CDS | 20.0% |
!!! | TATTTTTGCCATTGATTTAA+AGG | + | chr7.2:26164288-26164307 | MS.gene033426:CDS | 20.0% |
!!! | TTTAGGATCATCATAATTTA+TGG | - | chr7.2:26165405-26165424 | None:intergenic | 20.0% |
! | AAATTAAACAAACCCTAGTT+AGG | + | chr7.2:26165156-26165175 | MS.gene033426:intron | 25.0% |
! | AACTTATATAAACCCTAACT+AGG | - | chr7.2:26165172-26165191 | None:intergenic | 25.0% |
! | AATACAAAGTTCATTCATCT+TGG | + | chr7.2:26166065-26166084 | MS.gene033426:CDS | 25.0% |
! | AATATGCAAAGATGCAAAAT+GGG | - | chr7.2:26165348-26165367 | None:intergenic | 25.0% |
! | AATTAAACAAACCCTAGTTA+GGG | + | chr7.2:26165157-26165176 | MS.gene033426:intron | 25.0% |
! | ACTTATATAAACCCTAACTA+GGG | - | chr7.2:26165171-26165190 | None:intergenic | 25.0% |
! | CAAAAAACTAGTTAAAAGAC+AGG | - | chr7.2:26164932-26164951 | None:intergenic | 25.0% |
! | CAACTTGACAGTATATTTAT+TGG | - | chr7.2:26165627-26165646 | None:intergenic | 25.0% |
! | GACAGTATATTTATTGGAAT+TGG | - | chr7.2:26165621-26165640 | None:intergenic | 25.0% |
! | TATCTTGTATTATGAACTCT+TGG | + | chr7.2:26164775-26164794 | MS.gene033426:intron | 25.0% |
! | TCTTGAATGATTCAATTCAT+TGG | + | chr7.2:26165852-26165871 | MS.gene033426:CDS | 25.0% |
! | TTATAAAAGATCCCAAACAA+CGG | + | chr7.2:26166249-26166268 | MS.gene033426:CDS | 25.0% |
!! | AGATGATTACATTGTAGTTT+TGG | + | chr7.2:26164078-26164097 | MS.gene033426:CDS | 25.0% |
!! | AGTGGTCTAAAATTAAGATA+TGG | + | chr7.2:26166032-26166051 | MS.gene033426:CDS | 25.0% |
!! | GATGATTACATTGTAGTTTT+GGG | + | chr7.2:26164079-26164098 | MS.gene033426:CDS | 25.0% |
!! | GTGGTCTAAAATTAAGATAT+GGG | + | chr7.2:26166033-26166052 | MS.gene033426:CDS | 25.0% |
!! | GTTTATGATTTGATGGTATT+TGG | + | chr7.2:26165983-26166002 | MS.gene033426:CDS | 25.0% |
!! | TGTCATTTCCTTTAAATCAA+TGG | - | chr7.2:26164299-26164318 | None:intergenic | 25.0% |
!! | TGTCTTTTCCTTTAAATCAA+AGG | - | chr7.2:26165918-26165937 | None:intergenic | 25.0% |
!!! | ATGATTACATTGTAGTTTTG+GGG | + | chr7.2:26164080-26164099 | MS.gene033426:CDS | 25.0% |
!!! | CAAAGTCAAATTTTAAGTTG+GGG | + | chr7.2:26164996-26165015 | MS.gene033426:intron | 25.0% |
!!! | TTTAACTAGTTTTTTGCTTG+AGG | + | chr7.2:26164936-26164955 | MS.gene033426:intron | 25.0% |
AAACTAGTTAAAAGACAGGA+AGG | - | chr7.2:26164928-26164947 | None:intergenic | 30.0% | |
AATACAAAGTGCATTCATCT+TGG | + | chr7.2:26164452-26164471 | MS.gene033426:intron | 30.0% | |
ACAAATGCAGAATCATTGTA+AGG | - | chr7.2:26165458-26165477 | None:intergenic | 30.0% | |
ACAACTTGTAAAGCATATTG+GGG | - | chr7.2:26164521-26164540 | None:intergenic | 30.0% | |
ACTTGCAATGCAATAAGTTT+AGG | - | chr7.2:26164970-26164989 | None:intergenic | 30.0% | |
AGTGATGAAGTAAGATAAAG+AGG | - | chr7.2:26164856-26164875 | None:intergenic | 30.0% | |
ATAAATTTCATGCAAAGACG+TGG | - | chr7.2:26165196-26165215 | None:intergenic | 30.0% | |
ATATGCAAAGATGCAAAATG+GGG | - | chr7.2:26165347-26165366 | None:intergenic | 30.0% | |
ATGGACAAAAGTTTATGTGT+GGG | - | chr7.2:26165386-26165405 | None:intergenic | 30.0% | |
CACAACTTGTAAAGCATATT+GGG | - | chr7.2:26164522-26164541 | None:intergenic | 30.0% | |
GAATATGCAAAGATGCAAAA+TGG | - | chr7.2:26165349-26165368 | None:intergenic | 30.0% | |
GATCCATCAAATACAATTAC+AGG | + | chr7.2:26165699-26165718 | MS.gene033426:CDS | 30.0% | |
TAATAAGTGGAAACAAGTTG+AGG | + | chr7.2:26165766-26165785 | MS.gene033426:CDS | 30.0% | |
TATGGACAAAAGTTTATGTG+TGG | - | chr7.2:26165387-26165406 | None:intergenic | 30.0% | |
TATTTATTGGAATTGGACAC+AGG | - | chr7.2:26165614-26165633 | None:intergenic | 30.0% | |
TCTCCTGTAATTGTATTTGA+TGG | - | chr7.2:26165705-26165724 | None:intergenic | 30.0% | |
TGGACACTATTTATGCAAAT+TGG | + | chr7.2:26165033-26165052 | MS.gene033426:intron | 30.0% | |
TTTATAATAAGAGTCGCCAT+AGG | - | chr7.2:26166236-26166255 | None:intergenic | 30.0% | |
TTTCCTCCTGTAATATTTGA+TGG | - | chr7.2:26164107-26164126 | None:intergenic | 30.0% | |
! | CTTGAATTTTCTTTTTCTCC+CGG | + | chr7.2:26166097-26166116 | MS.gene033426:CDS | 30.0% |
! | GATGATTACATGGTAGTTTT+GGG | + | chr7.2:26165677-26165696 | MS.gene033426:CDS | 30.0% |
! | GGCAATAATAACATTGCTTT+TGG | - | chr7.2:26165897-26165916 | None:intergenic | 30.0% |
! | TAATAAGTGGAATCAAGTTG+AGG | + | chr7.2:26164165-26164184 | MS.gene033426:CDS | 30.0% |
! | TATGATTTGATGGTATTTGG+CGG | + | chr7.2:26164373-26164392 | MS.gene033426:CDS | 30.0% |
! | TCTTGAATGGTTCTATTCAT+TGG | + | chr7.2:26164251-26164270 | MS.gene033426:CDS | 30.0% |
! | TGTCACGTTTAATTTAGTAC+TGG | + | chr7.2:26165057-26165076 | MS.gene033426:intron | 30.0% |
!! | TTGCTTCTGATTTGCTTTAT+AGG | + | chr7.2:26164188-26164207 | MS.gene033426:CDS | 30.0% |
!!! | TCTATTGATAGGGCTTTTTT+AGG | - | chr7.2:26165422-26165441 | None:intergenic | 30.0% |
AAAAACTAGCTCGATTGACT+TGG | + | chr7.2:26165724-26165743 | MS.gene033426:CDS | 35.0% | |
AAATTGGAGGTTCATGTAGA+GGG | + | chr7.2:26165519-26165538 | MS.gene033426:CDS | 35.0% | |
ACAAGTTGTGGTGATATAGT+TGG | + | chr7.2:26164532-26164551 | MS.gene033426:intron | 35.0% | |
ACTCTATATACACCGTTGTT+TGG | - | chr7.2:26164648-26164667 | None:intergenic | 35.0% | |
ATTTCGGTTATCAATTCTCC+AGG | - | chr7.2:26165248-26165267 | None:intergenic | 35.0% | |
CAACATAGTACAGATTTCAC+TGG | - | chr7.2:26165284-26165303 | None:intergenic | 35.0% | |
CCAATATGCTTTACAAGTTG+TGG | + | chr7.2:26164520-26164539 | MS.gene033426:intron | 35.0% | |
CCACAACTTGTAAAGCATAT+TGG | - | chr7.2:26164523-26164542 | None:intergenic | 35.0% | |
CCATAAAAGATCCCAAACAA+CGG | + | chr7.2:26164633-26164652 | MS.gene033426:intron | 35.0% | |
CTCTATATACACCGTTGTTT+GGG | - | chr7.2:26164647-26164666 | None:intergenic | 35.0% | |
GAAAACTAGCTCAATTGAGT+TGG | + | chr7.2:26164123-26164142 | MS.gene033426:CDS | 35.0% | |
GAATGATTCAATTCATTGGC+TGG | + | chr7.2:26165856-26165875 | MS.gene033426:CDS | 35.0% | |
GATTCCATATGTAGAAGTCA+CGG | - | chr7.2:26165565-26165584 | None:intergenic | 35.0% | |
TATTGGGGAAAAATTCAGAG+CGG | - | chr7.2:26164506-26164525 | None:intergenic | 35.0% | |
TCAGTGTATGGTATGTGAAT+AGG | + | chr7.2:26164401-26164420 | MS.gene033426:intron | 35.0% | |
TCCAATTTCAAGACGATATC+CGG | - | chr7.2:26165507-26165526 | None:intergenic | 35.0% | |
TCTCATTGAGAGCTAATAAG+TGG | + | chr7.2:26164152-26164171 | MS.gene033426:CDS | 35.0% | |
TTAGCGAAGCTTAATGACAA+AGG | + | chr7.2:26164574-26164593 | MS.gene033426:CDS | 35.0% | |
TTGGGGAAATTAGTTGACAA+TGG | + | chr7.2:26165013-26165032 | MS.gene033426:intron | 35.0% | |
! | CGATGATTACATGGTAGTTT+TGG | + | chr7.2:26165676-26165695 | MS.gene033426:CDS | 35.0% |
!!! | TAGTTTTTTGCTTGAGGACT+TGG | + | chr7.2:26164942-26164961 | MS.gene033426:intron | 35.0% |
AAGTTTATGTGTGGGTGAAG+CGG | - | chr7.2:26165378-26165397 | None:intergenic | 40.0% | |
AGGTATTTGTTTGTGGACAC+CGG | - | chr7.2:26165594-26165613 | None:intergenic | 40.0% | |
ATTCCACGAGAAAAGTCATC+TGG | - | chr7.2:26165959-26165978 | None:intergenic | 40.0% | |
ATTGGGGAAAAATTCAGAGC+GGG | - | chr7.2:26164505-26164524 | None:intergenic | 40.0% | |
CATGTCATGCGATGATTACA+TGG | + | chr7.2:26165667-26165686 | MS.gene033426:CDS | 40.0% | |
CCAATTTCAAGACGATATCC+GGG | - | chr7.2:26165506-26165525 | None:intergenic | 40.0% | |
GAAATTGGAGGTTCATGTAG+AGG | + | chr7.2:26165518-26165537 | MS.gene033426:CDS | 40.0% | |
GAGTTTGCAGTCTTCCTATA+AGG | - | chr7.2:26165806-26165825 | None:intergenic | 40.0% | |
GGATATCGTCTTGAAATTGG+AGG | + | chr7.2:26165506-26165525 | MS.gene033426:CDS | 40.0% | |
GGTCCATCAAATATTACAGG+AGG | + | chr7.2:26164101-26164120 | MS.gene033426:CDS | 40.0% | |
GTATCATGAAGCATGAGAAG+TGG | + | chr7.2:26164797-26164816 | MS.gene033426:intron | 40.0% | |
GTTACCGTGACTTCTACATA+TGG | + | chr7.2:26165558-26165577 | MS.gene033426:CDS | 40.0% | |
TACATATGGAATCCATCCAC+CGG | + | chr7.2:26165572-26165591 | MS.gene033426:CDS | 40.0% | |
TCAGTGTATGGAATATCGAG+TGG | + | chr7.2:26166014-26166033 | MS.gene033426:CDS | 40.0% | |
TGATAACCGAAATCCTGATG+AGG | + | chr7.2:26165255-26165274 | MS.gene033426:intron | 40.0% | |
TGGACACAGGTATTTGTTTG+TGG | - | chr7.2:26165601-26165620 | None:intergenic | 40.0% | |
TGGGGTCCATCAAATATTAC+AGG | + | chr7.2:26164098-26164117 | MS.gene033426:CDS | 40.0% | |
TTTATGGTAAGAGTCGCCAT+AGG | - | chr7.2:26164620-26164639 | None:intergenic | 40.0% | |
! | ATTTTCTTTTTCTCCCGGTC+TGG | + | chr7.2:26166102-26166121 | MS.gene033426:CDS | 40.0% |
! | CTGCTTCTGATTTGCCTTAT+AGG | + | chr7.2:26165789-26165808 | MS.gene033426:CDS | 40.0% |
! | GAATGGTTCTATTCATTGGC+TGG | + | chr7.2:26164255-26164274 | MS.gene033426:CDS | 40.0% |
! | TATACTGTCAAGTTGCTCCA+TGG | + | chr7.2:26165632-26165651 | MS.gene033426:CDS | 40.0% |
! | TTTTCTTTTTCTCCCGGTCT+GGG | + | chr7.2:26166103-26166122 | MS.gene033426:CDS | 40.0% |
!! | AAGACTGCAAACTCTGAAGT+TGG | + | chr7.2:26165812-26165831 | MS.gene033426:CDS | 40.0% |
!! | AAGACTTCAAGCTCTGAAGT+TGG | + | chr7.2:26164211-26164230 | MS.gene033426:CDS | 40.0% |
!! | CCGTTGTTTGGGATCTTTTA+TGG | - | chr7.2:26164636-26164655 | None:intergenic | 40.0% |
!! | CTTCTAGAGTATCACTCCTA+TGG | + | chr7.2:26164601-26164620 | MS.gene033426:intron | 40.0% |
!!! | GTAGAGGGTTTCTGTTTTTG+CGG | + | chr7.2:26165534-26165553 | MS.gene033426:CDS | 40.0% |
ACATGTCGTATCCGAAACCA+TGG | - | chr7.2:26165652-26165671 | None:intergenic | 45.0% | |
ATAGTCGGGTCGTTCTTGAA+TGG | + | chr7.2:26164238-26164257 | MS.gene033426:CDS | 45.0% | |
ATTCAAGAACGACCCGACTA+TGG | - | chr7.2:26164239-26164258 | None:intergenic | 45.0% | |
ATTCAAGAATGACCCGACAG+TGG | - | chr7.2:26165840-26165859 | None:intergenic | 45.0% | |
ATTTCACTGGCAACCTCATC+AGG | - | chr7.2:26165271-26165290 | None:intergenic | 45.0% | |
CATGAAGCATGAGAAGTGGT+AGG | + | chr7.2:26164801-26164820 | MS.gene033426:intron | 45.0% | |
CCCGGATATCGTCTTGAAAT+TGG | + | chr7.2:26165503-26165522 | MS.gene033426:CDS | 45.0% | |
GCAAGTGCGTTTGTAAGTCA+TGG | + | chr7.2:26165303-26165322 | MS.gene033426:intron | 45.0% | |
TATTGGGGAAAAACCCAGAC+CGG | - | chr7.2:26166119-26166138 | None:intergenic | 45.0% | |
TATTTGTTTGTGGACACCGG+TGG | - | chr7.2:26165591-26165610 | None:intergenic | 45.0% | |
TCTCTACTTTCACTCCCTGA+TGG | + | chr7.2:26166283-26166302 | MS.gene033426:CDS | 45.0% | |
TGGCAACCTCATCAGGATTT+CGG | - | chr7.2:26165264-26165283 | None:intergenic | 45.0% | |
TTCAAGAACGACCCGACTAT+GGG | - | chr7.2:26164238-26164257 | None:intergenic | 45.0% | |
TTCAAGAATGACCCGACAGT+GGG | - | chr7.2:26165839-26165858 | None:intergenic | 45.0% | |
TTTCAAGACGATATCCGGGA+CGG | - | chr7.2:26165502-26165521 | None:intergenic | 45.0% | |
! | CTGCTAGAGTATCACTCCTA+TGG | + | chr7.2:26166217-26166236 | MS.gene033426:CDS | 45.0% |
! | CTTCCAGATGACTTTTCTCG+TGG | + | chr7.2:26165953-26165972 | MS.gene033426:CDS | 45.0% |
! | GTCAAGTTGCTCCATGGTTT+CGG | + | chr7.2:26165638-26165657 | MS.gene033426:CDS | 45.0% |
! | TCTGAAGTTGGTCCCATAGT+CGG | + | chr7.2:26164223-26164242 | MS.gene033426:CDS | 45.0% |
!! | AGACTTGACTTTTTCCGTCC+CGG | + | chr7.2:26165485-26165504 | MS.gene033426:intron | 45.0% |
!! | TTGGCGGACTTATCAGTGTA+TGG | + | chr7.2:26164389-26164408 | MS.gene033426:CDS | 45.0% |
!! | AAAAAATAATATAATCATAT+TGG | - | chr7.2:26165131-26165150 | None:intergenic | 5.0% |
ATTGGGGAAAAACCCAGACC+GGG | - | chr7.2:26166118-26166137 | None:intergenic | 50.0% | |
GCTAATCCAACAGCAGCATC+TGG | - | chr7.2:26164559-26164578 | None:intergenic | 50.0% | |
TCTCTGCTTTCACTCCCTGA+TGG | + | chr7.2:26164667-26164686 | MS.gene033426:intron | 50.0% | |
! | AAGCTTGCTCAGTGCCATCA+GGG | - | chr7.2:26164684-26164703 | None:intergenic | 50.0% |
! | ATGAAGAGCGTGCATCTTCC+TGG | + | chr7.2:26165227-26165246 | MS.gene033426:intron | 50.0% |
! | CTGAAGTTGGTCCCATAGTC+GGG | + | chr7.2:26164224-26164243 | MS.gene033426:CDS | 50.0% |
! | TAAGCTTGCTCAGTGCCATC+AGG | - | chr7.2:26164685-26164704 | None:intergenic | 50.0% |
! | TCTGAAGTTGGTCCCACTGT+CGG | + | chr7.2:26165824-26165843 | MS.gene033426:CDS | 50.0% |
AATCCAGCAGCAGCAGCATC+TGG | - | chr7.2:26166172-26166191 | None:intergenic | 55.0% | |
GTTGGACCAGATGCTGCTGT+TGG | + | chr7.2:26164550-26164569 | MS.gene033426:CDS | 55.0% | |
TGTTTGTGGACACCGGTGGA+TGG | - | chr7.2:26165587-26165606 | None:intergenic | 55.0% | |
! | AAGCTTGCTCAGCGCCATCA+GGG | - | chr7.2:26166300-26166319 | None:intergenic | 55.0% |
! | CTGAAGTTGGTCCCACTGTC+GGG | + | chr7.2:26165825-26165844 | MS.gene033426:CDS | 55.0% |
! | TAAGCTTGCTCAGCGCCATC+AGG | - | chr7.2:26166301-26166320 | None:intergenic | 55.0% |
GGACCAGATGCTGCTGCTGC+TGG | + | chr7.2:26166166-26166185 | MS.gene033426:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 26164070 | 26166321 | 26164070 | ID=MS.gene033426 |
chr7.2 | mRNA | 26164070 | 26166321 | 26164070 | ID=MS.gene033426.t1;Parent=MS.gene033426 |
chr7.2 | exon | 26164070 | 26164410 | 26164070 | ID=MS.gene033426.t1.exon1;Parent=MS.gene033426.t1 |
chr7.2 | CDS | 26164070 | 26164410 | 26164070 | ID=cds.MS.gene033426.t1;Parent=MS.gene033426.t1 |
chr7.2 | exon | 26164537 | 26164608 | 26164537 | ID=MS.gene033426.t1.exon2;Parent=MS.gene033426.t1 |
chr7.2 | CDS | 26164537 | 26164608 | 26164537 | ID=cds.MS.gene033426.t1;Parent=MS.gene033426.t1 |
chr7.2 | exon | 26165487 | 26166321 | 26165487 | ID=MS.gene033426.t1.exon3;Parent=MS.gene033426.t1 |
chr7.2 | CDS | 26165487 | 26166321 | 26165487 | ID=cds.MS.gene033426.t1;Parent=MS.gene033426.t1 |
Gene Sequence |
Protein sequence |