AlfalfaGEDB | MS.gene041475

M. sativa cultivar XinJiangDaYe / MS.gene041475

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041475.t1	XP_013458210.1	59.9	222	77	6	3	216	149	366	1.70E-62	249.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041475.t1	A0A072USB5	59.9	222	77	6	3	216	149	366	1.3e-62	249.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene041475	MS.gene006705	PPI
MS.gene041475	MS.gene035237	PPI
MS.gene072177	MS.gene041475	PPI
MS.gene58722	MS.gene041475	PPI
MS.gene064091	MS.gene041475	PPI
MS.gene041475	MS.gene000036	PPI
MS.gene045476	MS.gene041475	PPI
MS.gene041475	MS.gene50309	PPI
MS.gene50307	MS.gene041475	PPI
MS.gene43796	MS.gene041475	PPI
MS.gene041475	MS.gene041394	PPI
MS.gene58312	MS.gene041475	PPI
MS.gene041475	MS.gene036664	PPI
MS.gene041475	MS.gene053257	PPI
MS.gene041475	MS.gene58241	PPI
MS.gene041475	MS.gene77858	PPI
MS.gene041475	MS.gene51201	PPI
MS.gene041475	MS.gene058696	PPI
MS.gene041475	MS.gene009893	PPI
MS.gene041475	MS.gene045475	PPI
MS.gene51191	MS.gene041475	PPI
MS.gene041475	MS.gene63655	PPI
MS.gene041475	MS.gene50336	PPI
MS.gene041475	MS.gene39262	PPI
MS.gene58313	MS.gene041475	PPI
MS.gene041475	MS.gene57526	PPI
MS.gene041475	MS.gene77704	PPI
MS.gene066622	MS.gene041475	PPI
MS.gene041475	MS.gene033083	PPI
MS.gene036583	MS.gene041475	PPI
MS.gene88780	MS.gene041475	PPI
MS.gene87588	MS.gene041475	PPI
MS.gene041475	MS.gene63658	PPI
MS.gene041475	MS.gene033081	PPI
MS.gene96448	MS.gene041475	PPI
MS.gene041475	MS.gene036663	PPI
MS.gene041475	MS.gene68580	PPI
MS.gene041392	MS.gene041475	PPI
MS.gene041475	MS.gene072177	PPI
MS.gene041475	MS.gene92376	PPI
MS.gene041475	MS.gene57525	PPI
MS.gene069075	MS.gene041475	PPI
MS.gene041475	MS.gene023996	PPI
MS.gene041475	MS.gene030114	PPI
MS.gene041475	MS.gene58716	PPI
MS.gene031591	MS.gene041475	PPI
MS.gene041475	MS.gene045473	PPI
MS.gene041475	MS.gene50301	PPI
MS.gene041475	MS.gene88774	PPI
MS.gene041475	MS.gene045474	PPI
MS.gene041475	MS.gene031590	PPI
MS.gene041475	MS.gene036558	PPI
MS.gene041475	MS.gene40984	PPI
MS.gene96126	MS.gene041475	PPI
MS.gene041475	MS.gene066623	PPI
MS.gene041475	MS.gene064108	PPI
MS.gene016524	MS.gene041475	PPI
MS.gene041475	MS.gene064090	PPI
MS.gene87559	MS.gene041475	PPI
MS.gene041475	MS.gene24208	PPI
MS.gene041475	MS.gene58317	PPI
MS.gene041475	MS.gene90742	PPI
MS.gene041475	MS.gene24212	PPI
MS.gene041475	MS.gene51191	PPI
MS.gene31587	MS.gene041475	PPI
MS.gene033441	MS.gene041475	PPI
MS.gene041475	MS.gene58240	PPI
MS.gene041475	MS.gene063472	PPI
MS.gene063826	MS.gene041475	PPI
MS.gene041475	MS.gene43790	PPI
MS.gene041475	MS.gene57717	PPI
MS.gene041475	MS.gene034680	PPI
MS.gene041475	MS.gene31587	PPI
MS.gene041475	MS.gene27021	PPI
MS.gene44892	MS.gene041475	PPI
MS.gene041475	MS.gene044563	PPI
MS.gene041475	MS.gene50327	PPI
MS.gene041475	MS.gene066626	PPI
MS.gene041475	MS.gene40982	PPI
MS.gene58239	MS.gene041475	PPI
MS.gene041475	MS.gene50339	PPI
MS.gene066641	MS.gene041475	PPI
MS.gene000038	MS.gene041475	PPI
MS.gene041475	MS.gene063474	PPI
MS.gene064111	MS.gene041475	PPI
MS.gene041475	MS.gene58785	PPI
MS.gene041475	MS.gene88416	PPI
MS.gene041475	MS.gene57530	PPI
MS.gene041475	MS.gene034681	PPI
MS.gene39262	MS.gene041475	PPI
MS.gene053256	MS.gene041475	PPI
MS.gene041475	MS.gene57532	PPI
MS.gene041475	MS.gene003076	PPI
MS.gene025887	MS.gene041475	PPI
MS.gene75875	MS.gene041475	PPI
MS.gene041470	MS.gene041475	PPI
MS.gene058694	MS.gene041475	PPI
MS.gene041475	MS.gene009892	PPI
MS.gene041475	MS.gene26101	PPI
MS.gene041475	MS.gene061241	PPI
MS.gene041475	MS.gene058669	PPI
MS.gene006710	MS.gene041475	PPI
MS.gene041475	MS.gene51192	PPI
MS.gene041475	MS.gene51188	PPI
MS.gene041475	MS.gene033875	PPI
MS.gene011679	MS.gene041475	PPI
MS.gene041475	MS.gene041489	PPI
MS.gene041475	MS.gene38220	PPI
MS.gene041475	MS.gene40986	PPI
MS.gene64001	MS.gene041475	PPI
MS.gene041475	MS.gene36704	PPI
MS.gene041475	MS.gene034688	PPI
MS.gene041475	MS.gene58239	PPI
MS.gene041475	MS.gene03060	PPI
MS.gene041475	MS.gene24213	PPI
MS.gene041475	MS.gene033440	PPI
MS.gene041475	MS.gene31637	PPI
MS.gene041475	MS.gene024011	PPI
MS.gene041475	MS.gene034677	PPI
MS.gene041475	MS.gene064109	PPI
MS.gene77856	MS.gene041475	PPI
MS.gene041475	MS.gene035238	PPI
MS.gene041475	MS.gene85043	PPI
MS.gene041475	MS.gene064114	PPI
MS.gene041475	MS.gene87584	PPI
MS.gene041475	MS.gene87563	PPI
MS.gene63655	MS.gene041475	PPI
MS.gene041475	MS.gene062698	PPI
MS.gene44883	MS.gene041475	PPI
MS.gene041475	MS.gene80610	PPI
MS.gene41046	MS.gene041475	PPI
MS.gene041475	MS.gene90743	PPI
MS.gene017412	MS.gene041475	PPI
MS.gene041475	MS.gene053256	PPI
MS.gene57529	MS.gene041475	PPI
MS.gene041475	MS.gene40886	PPI
MS.gene80884	MS.gene041475	PPI
MS.gene041475	MS.gene85454	PPI
MS.gene009883	MS.gene041475	PPI
MS.gene041475	MS.gene041391	PPI
MS.gene041475	MS.gene033443	PPI
MS.gene041475	MS.gene036583	PPI
MS.gene041475	MS.gene006711	PPI
MS.gene033427	MS.gene041475	PPI
MS.gene041475	MS.gene57536	PPI
MS.gene041475	MS.gene50307	PPI
MS.gene041474	MS.gene041475	PPI
MS.gene041475	MS.gene021553	PPI
MS.gene27020	MS.gene041475	PPI
MS.gene066620	MS.gene041475	PPI
MS.gene035236	MS.gene041475	PPI
MS.gene041475	MS.gene44887	PPI
MS.gene041475	MS.gene058701	PPI
MS.gene041475	MS.gene87554	PPI
MS.gene041475	MS.gene009891	PPI
MS.gene041475	MS.gene064083	PPI
MS.gene041388	MS.gene041475	PPI
MS.gene041475	MS.gene27051	PPI
MS.gene51208	MS.gene041475	PPI
MS.gene041475	MS.gene048193	PPI
MS.gene041475	MS.gene58312	PPI
MS.gene041475	MS.gene024420	PPI
MS.gene041475	MS.gene016220	PPI
MS.gene041475	MS.gene57533	PPI
MS.gene041475	MS.gene024008	PPI
MS.gene041475	MS.gene50337	PPI
MS.gene041475	MS.gene063670	PPI
MS.gene041475	MS.gene54541	PPI
MS.gene041475	MS.gene39265	PPI
MS.gene041475	MS.gene50306	PPI
MS.gene88776	MS.gene041475	PPI
MS.gene041475	MS.gene041393	PPI
MS.gene35068	MS.gene041475	PPI
MS.gene041475	MS.gene060368	PPI
MS.gene90744	MS.gene041475	PPI
MS.gene51204	MS.gene041475	PPI
MS.gene041475	MS.gene053299	PPI
MS.gene036557	MS.gene041475	PPI
MS.gene041475	MS.gene28758	PPI
MS.gene50329	MS.gene041475	PPI
MS.gene041475	MS.gene044429	PPI
MS.gene041475	MS.gene57531	PPI
MS.gene041475	MS.gene27284	PPI
MS.gene041475	MS.gene96448	PPI
MS.gene041475	MS.gene041388	PPI
MS.gene57537	MS.gene041475	PPI
MS.gene041475	MS.gene019503	PPI
MS.gene059156	MS.gene041475	PPI
MS.gene84698	MS.gene041475	PPI
MS.gene041475	MS.gene48221	PPI
MS.gene82082	MS.gene041475	PPI
MS.gene50306	MS.gene041475	PPI
MS.gene041475	MS.gene51190	PPI
MS.gene041475	MS.gene58319	PPI
MS.gene041475	MS.gene034762	PPI
MS.gene041475	MS.gene71159	PPI
MS.gene041475	MS.gene59943	PPI
MS.gene041475	MS.gene044426	PPI
MS.gene041475	MS.gene033441	PPI
MS.gene57535	MS.gene041475	PPI
MS.gene041475	MS.gene033442	PPI
MS.gene87200	MS.gene041475	PPI
MS.gene041475	MS.gene060366	PPI
MS.gene033432	MS.gene041475	PPI
MS.gene041475	MS.gene44428	PPI
MS.gene041475	MS.gene066120	PPI
MS.gene041475	MS.gene035235	PPI
MS.gene44885	MS.gene041475	PPI
MS.gene041475	MS.gene058703	PPI
MS.gene041475	MS.gene57528	PPI
MS.gene066635	MS.gene041475	PPI
MS.gene041475	MS.gene024000	PPI
MS.gene041475	MS.gene012215	PPI
MS.gene010758	MS.gene041475	PPI
MS.gene87586	MS.gene041475	PPI
MS.gene041475	MS.gene033079	PPI
MS.gene041475	MS.gene055694	PPI
MS.gene041475	MS.gene059101	PPI
MS.gene50326	MS.gene041475	PPI
MS.gene041475	MS.gene033444	PPI
MS.gene041475	MS.gene58316	PPI
MS.gene041475	MS.gene033430	PPI
MS.gene50339	MS.gene041475	PPI
MS.gene041475	MS.gene58321	PPI
MS.gene041475	MS.gene87564	PPI
MS.gene041475	MS.gene58315	PPI
MS.gene060366	MS.gene041475	PPI
MS.gene42452	MS.gene041475	PPI
MS.gene041475	MS.gene041473	PPI
MS.gene063414	MS.gene041475	PPI
MS.gene041475	MS.gene50311	PPI
MS.gene041475	MS.gene064112	PPI
MS.gene041475	MS.gene058989	PPI
MS.gene041475	MS.gene036556	PPI
MS.gene041475	MS.gene57538	PPI
MS.gene40902	MS.gene041475	PPI
MS.gene041475	MS.gene060367	PPI
MS.gene041475	MS.gene058693	PPI
MS.gene041475	MS.gene27319	PPI
MS.gene041475	MS.gene64001	PPI
MS.gene041475	MS.gene015089	PPI
MS.gene041475	MS.gene041395	PPI
MS.gene041475	MS.gene51200	PPI
MS.gene26957	MS.gene041475	PPI
MS.gene041475	MS.gene51189	PPI
MS.gene97996	MS.gene041475	PPI
MS.gene036582	MS.gene041475	PPI
MS.gene58320	MS.gene041475	PPI
MS.gene041475	MS.gene046958	PPI
MS.gene041475	MS.gene24286	PPI
MS.gene041475	MS.gene066635	PPI
MS.gene58781	MS.gene041475	PPI
MS.gene011106	MS.gene041475	PPI
MS.gene041475	MS.gene58783	PPI
MS.gene62398	MS.gene041475	PPI
MS.gene60027	MS.gene041475	PPI
MS.gene44886	MS.gene041475	PPI
MS.gene041475	MS.gene40988	PPI
MS.gene041475	MS.gene24173	PPI
MS.gene041475	MS.gene036584	PPI
MS.gene041475	MS.gene036662	PPI
MS.gene40904	MS.gene041475	PPI
MS.gene041390	MS.gene041475	PPI
MS.gene92376	MS.gene041475	PPI
MS.gene041475	MS.gene88776	PPI
MS.gene000035	MS.gene041475	PPI
MS.gene041475	MS.gene42451	PPI
MS.gene87569	MS.gene041475	PPI
MS.gene87573	MS.gene041475	PPI
MS.gene041475	MS.gene50304	PPI
MS.gene041491	MS.gene041475	PPI
MS.gene041475	MS.gene035261	PPI
MS.gene041475	MS.gene023999	PPI
MS.gene019504	MS.gene041475	PPI
MS.gene041475	MS.gene69307	PPI
MS.gene059096	MS.gene041475	PPI
MS.gene041475	MS.gene036581	PPI
MS.gene041475	MS.gene019507	PPI
MS.gene006711	MS.gene041475	PPI
MS.gene041475	MS.gene033431	PPI
MS.gene58716	MS.gene041475	PPI
MS.gene033444	MS.gene041475	PPI
MS.gene019505	MS.gene041475	PPI
MS.gene58785	MS.gene041475	PPI
MS.gene041475	MS.gene50320	PPI
MS.gene034690	MS.gene041475	PPI
MS.gene041475	MS.gene58314	PPI
MS.gene041475	MS.gene87557	PPI
MS.gene26949	MS.gene041475	PPI
MS.gene041475	MS.gene51199	PPI
MS.gene041475	MS.gene035263	PPI
MS.gene041475	MS.gene67501	PPI
MS.gene041475	MS.gene96406	PPI
MS.gene036760	MS.gene041475	PPI
MS.gene041475	MS.gene27285	PPI
MS.gene041475	MS.gene035262	PPI
MS.gene77857	MS.gene041475	PPI
MS.gene58311	MS.gene041475	PPI
MS.gene041475	MS.gene77857	PPI
MS.gene041475	MS.gene028390	PPI
MS.gene57527	MS.gene041475	PPI
MS.gene041475	MS.gene40878	PPI
MS.gene041475	MS.gene96407	PPI
MS.gene041475	MS.gene058694	PPI
MS.gene041475	MS.gene069075	PPI
MS.gene033426	MS.gene041475	PPI
MS.gene59639	MS.gene041475	PPI
MS.gene50298	MS.gene041475	PPI
MS.gene67687	MS.gene041475	PPI
MS.gene041475	MS.gene047279	PPI
MS.gene041475	MS.gene060370	PPI
MS.gene041475	MS.gene50305	PPI
MS.gene041475	MS.gene024002	PPI
MS.gene041475	MS.gene032969	PPI
MS.gene041475	MS.gene68890	PPI
MS.gene041475	MS.gene041392	PPI
MS.gene041475	MS.gene50297	PPI
MS.gene041475	MS.gene42445	PPI
MS.gene041475	MS.gene86273	PPI
MS.gene019506	MS.gene041475	PPI
MS.gene041475	MS.gene26830	PPI
MS.gene041475	MS.gene40985	PPI
MS.gene058692	MS.gene041475	PPI
MS.gene041475	MS.gene22715	PPI
MS.gene041475	MS.gene038756	PPI
MS.gene041475	MS.gene51207	PPI
MS.gene041475	MS.gene63657	PPI
MS.gene69309	MS.gene041475	PPI
MS.gene63658	MS.gene041475	PPI
MS.gene041475	MS.gene059157	PPI
MS.gene041475	MS.gene36595	PPI
MS.gene041475	MS.gene57527	PPI
MS.gene041475	MS.gene024004	PPI
MS.gene041475	MS.gene045140	PPI
MS.gene041475	MS.gene070462	PPI
MS.gene034686	MS.gene041475	PPI
MS.gene041475	MS.gene061240	PPI
MS.gene041475	MS.gene54049	PPI
MS.gene070461	MS.gene041475	PPI
MS.gene041475	MS.gene88780	PPI
MS.gene041475	MS.gene064086	PPI
MS.gene041475	MS.gene035234	PPI
MS.gene041475	MS.gene041468	PPI
MS.gene87563	MS.gene041475	PPI
MS.gene041475	MS.gene066639	PPI
MS.gene041475	MS.gene50332	PPI
MS.gene041475	MS.gene42447	PPI
MS.gene041475	MS.gene024979	PPI
MS.gene051820	MS.gene041475	PPI
MS.gene041475	MS.gene43789	PPI
MS.gene041475	MS.gene64203	PPI
MS.gene81242	MS.gene041475	PPI
MS.gene27283	MS.gene041475	PPI
MS.gene041475	MS.gene24826	PPI
MS.gene041475	MS.gene40904	PPI
MS.gene041475	MS.gene044425	PPI
MS.gene041475	MS.gene032970	PPI
MS.gene041475	MS.gene57537	PPI
MS.gene51202	MS.gene041475	PPI
MS.gene87562	MS.gene041475	PPI
MS.gene041475	MS.gene59637	PPI
MS.gene041475	MS.gene033426	PPI
MS.gene041475	MS.gene27022	PPI
MS.gene26829	MS.gene041475	PPI
MS.gene064104	MS.gene041475	PPI
MS.gene041475	MS.gene97996	PPI
MS.gene041475	MS.gene87585	PPI
MS.gene041475	MS.gene024009	PPI
MS.gene041475	MS.gene036599	PPI
MS.gene041475	MS.gene40887	PPI
MS.gene041475	MS.gene87200	PPI
MS.gene041475	MS.gene42444	PPI
MS.gene041475	MS.gene67687	PPI
MS.gene43789	MS.gene041475	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene041475.t1	MTR_4g117780	57.848	223	82	6	3	217	149	367	1.59e-70	219
MS.gene041475.t1	MTR_4g117770	57.848	223	82	6	3	217	149	367	3.52e-68	213
MS.gene041475.t1	MTR_4g117810	57.848	223	82	6	3	217	149	367	3.52e-68	213
MS.gene041475.t1	MTR_6g060650	55.556	225	80	6	3	216	157	372	3.96e-67	211
MS.gene041475.t1	MTR_4g117850	55.752	226	75	7	3	210	155	373	2.23e-65	206
MS.gene041475.t1	MTR_4g117720	55.365	233	77	9	3	217	155	378	3.40e-65	206
MS.gene041475.t1	MTR_4g023130	54.795	219	84	6	3	216	104	312	8.16e-65	203
MS.gene041475.t1	MTR_3g034180	54.274	234	79	6	3	216	263	488	9.34e-65	208
MS.gene041475.t1	MTR_4g023080	53.881	219	86	6	3	216	145	353	1.96e-63	201
MS.gene041475.t1	MTR_3g103020	53.712	229	85	7	3	217	157	378	3.15e-63	201
MS.gene041475.t1	MTR_4g109280	57.711	201	73	6	20	217	168	359	1.19e-62	199
MS.gene041475.t1	MTR_4g109270	54.751	221	88	5	3	217	150	364	1.36e-62	199
MS.gene041475.t1	MTR_8g040935	56.311	206	77	6	18	217	10	208	3.40e-62	193
MS.gene041475.t1	MTR_4g116330	52.423	227	88	7	3	217	162	380	1.52e-59	191
MS.gene041475.t1	MTR_3g034160	51.073	233	88	5	3	216	149	374	1.97e-59	191
MS.gene041475.t1	MTR_4g118380	55.392	204	71	5	3	191	159	357	2.47e-59	190
MS.gene041475.t1	MTR_4g116320	55.172	203	75	7	17	214	64	255	1.50e-57	182
MS.gene041475.t1	MTR_4g122850	51.528	229	90	8	3	217	143	364	1.63e-57	186
MS.gene041475.t1	MTR_1g055135	49.351	231	97	6	3	217	149	375	2.50e-56	183
MS.gene041475.t1	MTR_4g023090	47.826	230	93	6	3	212	157	379	3.11e-56	183
MS.gene041475.t1	MTR_3g034130	53.846	208	70	5	3	191	149	349	7.45e-56	182
MS.gene041475.t1	MTR_1g055175	51.485	202	83	7	22	217	9	201	1.56e-55	176
MS.gene041475.t1	MTR_4g021785	49.545	220	97	6	3	217	145	355	7.12e-55	179
MS.gene041475.t1	MTR_4g023070	48.133	241	88	9	3	216	139	369	1.09e-54	179
MS.gene041475.t1	MTR_4g118400	54.124	194	65	6	20	211	123	294	2.37e-54	176
MS.gene041475.t1	MTR_4g094365	50.442	226	92	9	3	217	148	364	2.62e-52	172
MS.gene041475.t1	MTR_4g023380	46.444	239	88	8	3	217	157	379	1.02e-51	171
MS.gene041475.t1	MTR_5g097210	50.661	227	84	10	3	212	143	358	1.49e-51	171
MS.gene041475.t1	MTR_4g023120	45.868	242	94	9	3	217	139	370	2.94e-49	164
MS.gene041475.t1	MTR_1g055195	50.000	226	93	9	3	217	262	478	1.72e-48	165
MS.gene041475.t1	MTR_6g463430	47.489	219	92	10	4	217	2	202	2.51e-48	157
MS.gene041475.t1	MTR_8g433030	52.551	196	83	7	20	213	151	338	4.84e-48	160
MS.gene041475.t1	MTR_8g032390	52.551	196	83	7	20	213	184	371	1.21e-47	160
MS.gene041475.t1	MTR_1g055165	52.047	171	71	5	50	217	156	318	2.47e-47	158
MS.gene041475.t1	MTR_5g070080	50.000	224	92	8	3	214	167	382	1.06e-46	158
MS.gene041475.t1	MTR_4g023190	48.430	223	93	9	3	215	147	357	1.44e-46	157
MS.gene041475.t1	MTR_4g023200	47.982	223	95	9	3	215	147	358	2.38e-46	157
MS.gene041475.t1	MTR_4g023150	47.982	223	95	9	3	215	147	358	3.46e-45	154
MS.gene041475.t1	MTR_8g433040	46.320	231	86	10	3	217	156	364	5.72e-44	150
MS.gene041475.t1	MTR_8g032380	46.320	231	86	10	3	217	156	364	5.72e-44	150
MS.gene041475.t1	MTR_4g117530	45.205	219	77	7	3	217	74	253	1.69e-43	146
MS.gene041475.t1	MTR_1g055250	45.366	205	92	7	1	194	49	244	3.06e-43	148
MS.gene041475.t1	MTR_4g118370	46.222	225	80	10	3	212	57	255	3.67e-42	143
MS.gene041475.t1	MTR_4g117750	46.018	226	99	9	4	211	133	353	1.01e-40	145
MS.gene041475.t1	MTR_4g117750	59.633	109	38	4	107	212	373	478	2.64e-30	116
MS.gene041475.t1	MTR_7g079400	41.176	238	110	9	1	217	109	337	5.06e-40	140
MS.gene041475.t1	MTR_5g070088	44.298	228	105	8	3	215	163	383	7.78e-40	140
MS.gene041475.t1	MTR_8g102520	41.453	234	111	9	1	217	98	322	1.84e-39	138
MS.gene041475.t1	MTR_5g070130	42.174	230	110	9	3	214	149	373	1.29e-38	137
MS.gene041475.t1	MTR_4g117870	42.731	227	74	8	3	217	85	267	5.36e-38	133
MS.gene041475.t1	MTR_4g023440	42.793	222	73	7	4	217	157	332	3.83e-37	132
MS.gene041475.t1	MTR_4g116330	42.291	227	72	7	3	217	162	341	2.74e-35	127
MS.gene041475.t1	MTR_4g118360	56.391	133	48	5	88	217	1	126	1.10e-34	120
MS.gene041475.t1	MTR_2g048580	35.586	222	119	8	3	217	138	342	8.95e-31	115
MS.gene041475.t1	MTR_7g079370	36.207	232	116	8	3	213	132	352	9.53e-31	116
MS.gene041475.t1	MTR_4g117430	52.066	121	45	4	3	118	42	154	2.86e-30	109
MS.gene041475.t1	MTR_8g098830	42.105	171	85	6	21	187	34	194	6.92e-30	110
MS.gene041475.t1	MTR_4g121580	44.388	196	62	9	3	185	157	318	2.86e-29	112
MS.gene041475.t1	MTR_5g023000	59.375	96	36	2	123	217	6	99	1.64e-27	100
MS.gene041475.t1	MTR_8g013010	54.032	124	37	5	3	116	196	309	8.12e-27	104
MS.gene041475.t1	MTR_4g122860	39.394	198	79	8	27	217	157	320	6.73e-26	102
MS.gene041475.t1	MTR_7g079450	42.857	147	71	5	73	217	2	137	1.42e-22	89.4
MS.gene041475.t1	MTR_7g079420	37.870	169	93	7	53	217	984	1144	2.36e-22	95.1
MS.gene041475.t1	MTR_4g114700	35.586	222	73	7	3	208	51	218	2.79e-21	88.6
MS.gene041475.t1	MTR_7g117720	54.545	88	35	2	129	212	186	272	1.40e-16	76.6
MS.gene041475.t1	MTR_4g023430	51.190	84	35	2	138	217	141	222	4.47e-16	74.3
MS.gene041475.t1	MTR_6g034720	45.000	100	41	3	3	90	73	170	9.38e-16	73.2
MS.gene041475.t1	MTR_8g013005	63.934	61	19	2	158	217	1	59	4.54e-14	64.7
MS.gene041475.t1	MTR_1g094210	28.283	198	113	9	3	187	195	376	4.12e-12	64.7
MS.gene041475.t1	MTR_4g116340	47.674	86	33	4	3	78	164	247	1.60e-11	62.4
MS.gene041475.t1	MTR_1g094210	27.835	194	111	9	3	183	195	372	7.72e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 51 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCAAGTTTGATGGAATATA+AGG	0.192370	8.2:+11727293	None:intergenic
GATTGTGGTTTGTGGGTATT+TGG	0.221112	8.2:-11727029	MS.gene041475:CDS
ATCGTAATACAACTGAAATA+TGG	0.303594	8.2:-11726977	MS.gene041475:CDS
GAGTAGGGTCCCTTTGTAAT+GGG	0.322096	8.2:-11727184	MS.gene041475:CDS
TTTGTAATGGGGCTATTCAT+TGG	0.336970	8.2:-11727172	MS.gene041475:CDS
CTAATGATGTCCTTTACATT+TGG	0.354400	8.2:-11726902	MS.gene041475:CDS
CCCTTATATTCCATCAAACT+TGG	0.358101	8.2:-11727294	MS.gene041475:CDS
GGAGTAGGGTCCCTTTGTAA+TGG	0.396390	8.2:-11727185	MS.gene041475:CDS
TTTCCAGATGATTATTATAA+CGG	0.407070	8.2:-11727071	MS.gene041475:CDS
AGAGCATTGCTCCAATTGTA+AGG	0.429098	8.2:-11726778	MS.gene041475:CDS
TAATGGGGCTATTCATTGGT+TGG	0.429474	8.2:-11727168	MS.gene041475:CDS
GACTCTTTGCTTTCACTCCC+CGG	0.434215	8.2:-11726726	MS.gene041475:CDS
TCGTAATACAACTGAAATAT+GGG	0.435341	8.2:-11726976	MS.gene041475:CDS
ACCACGTGAATCCTTACAAT+TGG	0.439030	8.2:+11726767	None:intergenic
AAACCGTTATAATAATCATC+TGG	0.454919	8.2:+11727068	None:intergenic
CCAAGTTTGATGGAATATAA+GGG	0.458503	8.2:+11727294	None:intergenic
TTAAGCTTGCTCATTGCCAC+CGG	0.460768	8.2:+11726707	None:intergenic
ACGTATGGATTGTGGTTTGT+GGG	0.472010	8.2:-11727036	MS.gene041475:CDS
TTTCCTTTCTGTTAAATCAA+AGG	0.476302	8.2:+11727109	None:intergenic
GTTGATGATTATTCCGGAGT+AGG	0.486016	8.2:-11727200	MS.gene041475:CDS
ACTCCGGAATAATCATCAAC+GGG	0.493191	8.2:+11727203	None:intergenic
AGTCCCGTTGATGATTATTC+CGG	0.493361	8.2:-11727206	MS.gene041475:CDS
CTGCTACAAGGGGAGTGATC+AGG	0.499364	8.2:+11727227	None:intergenic
TTTCCTTTGATTTAACAGAA+AGG	0.499674	8.2:-11727112	MS.gene041475:CDS
AACGTATGGATTGTGGTTTG+TGG	0.511387	8.2:-11727037	MS.gene041475:CDS
AATACAAAGTGAATTCGTCT+TGG	0.512787	8.2:-11726944	MS.gene041475:CDS
TGGTGGTAGTACAGAAAGGT+TGG	0.512790	8.2:-11726829	MS.gene041475:CDS
TTGATGATTATTCCGGAGTA+GGG	0.518500	8.2:-11727199	MS.gene041475:CDS
GGTGATATTATTGGAAAAGA+TGG	0.522115	8.2:-11726849	MS.gene041475:CDS
TAAGCTTGCTCATTGCCACC+GGG	0.526590	8.2:+11726708	None:intergenic
CATCAACGGGACTGCTACAA+GGG	0.529706	8.2:+11727216	None:intergenic
ATTACAAAGGGACCCTACTC+CGG	0.531948	8.2:+11727187	None:intergenic
GGGAAAAGTACCAAATGTAA+AGG	0.532919	8.2:+11726892	None:intergenic
ATTTCTCAGTCTATGCGCTA+AGG	0.533303	8.2:-11727003	MS.gene041475:CDS
TCATCAACGGGACTGCTACA+AGG	0.534486	8.2:+11727215	None:intergenic
TCTCATTGAGAGACAATACA+TGG	0.536974	8.2:-11727265	MS.gene041475:CDS
TTTCTCAGTCTATGCGCTAA+GGG	0.541350	8.2:-11727002	MS.gene041475:CDS
ATTTGTGAACGTATGGATTG+TGG	0.541400	8.2:-11727044	MS.gene041475:CDS
ATGAATAGCCCCATTACAAA+GGG	0.555543	8.2:+11727175	None:intergenic
CTGATCATCTCCAAAACCAT+AGG	0.587717	8.2:+11727334	None:intergenic
TACTCCGGAATAATCATCAA+CGG	0.590143	8.2:+11727202	None:intergenic
AATGAATAGCCCCATTACAA+AGG	0.597680	8.2:+11727174	None:intergenic
AAGATGGTGGTAGTACAGAA+AGG	0.602755	8.2:-11726833	MS.gene041475:CDS
AATTGTAAGGATTCACGTGG+TGG	0.626284	8.2:-11726765	MS.gene041475:CDS
AGTAGGGTCCCTTTGTAATG+GGG	0.631345	8.2:-11727183	MS.gene041475:CDS
GATATTATTGGAAAAGATGG+TGG	0.651238	8.2:-11726846	MS.gene041475:CDS
ATCAACGGGACTGCTACAAG+GGG	0.680280	8.2:+11727217	None:intergenic
AAGCTTGCTCATTGCCACCG+GGG	0.691782	8.2:+11726709	None:intergenic
TCCAATTGTAAGGATTCACG+TGG	0.697098	8.2:-11726768	MS.gene041475:CDS
TCTTTGCTTTCACTCCCCGG+TGG	0.705967	8.2:-11726723	MS.gene041475:CDS
TTGGTGAAGTATGATGACAA+TGG	0.748686	8.2:-11726810	MS.gene041475:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCCAGATGATTATTATAA+CGG	-	chr8.2:11726974-11726993	MS.gene041475:CDS	20.0%
!!!	TTTTCGTGATGATTTAAAAA+AGG	-	chr8.2:11726901-11726920	MS.gene041475:CDS	20.0%
!	AAACCGTTATAATAATCATC+TGG	+	chr8.2:11726980-11726999	None:intergenic	25.0%
!	ACAAAAAGTGGTGATATTAT+TGG	-	chr8.2:11727187-11727206	MS.gene041475:CDS	25.0%
!	ATCGTAATACAACTGAAATA+TGG	-	chr8.2:11727068-11727087	MS.gene041475:CDS	25.0%
!	TCGTAATACAACTGAAATAT+GGG	-	chr8.2:11727069-11727088	MS.gene041475:CDS	25.0%
!	TTTCCTTTCTGTTAAATCAA+AGG	+	chr8.2:11726939-11726958	None:intergenic	25.0%
!!	ACTTTTTGTACAACAAATTG+GGG	+	chr8.2:11727176-11727195	None:intergenic	25.0%
!!	TTTCCTTTGATTTAACAGAA+AGG	-	chr8.2:11726933-11726952	MS.gene041475:CDS	25.0%
!!!	CACTTTTTGTACAACAAATT+GGG	+	chr8.2:11727177-11727196	None:intergenic	25.0%
	AATACAAAGTGAATTCGTCT+TGG	-	chr8.2:11727101-11727120	MS.gene041475:CDS	30.0%
	CCAAGTTTGATGGAATATAA+GGG	+	chr8.2:11726754-11726773	None:intergenic	30.0%
	CTAATGATGTCCTTTACATT+TGG	-	chr8.2:11727143-11727162	MS.gene041475:CDS	30.0%
	GATATTATTGGAAAAGATGG+TGG	-	chr8.2:11727199-11727218	MS.gene041475:CDS	30.0%
	GGTGATATTATTGGAAAAGA+TGG	-	chr8.2:11727196-11727215	MS.gene041475:CDS	30.0%
	TCCAAGTTTGATGGAATATA+AGG	+	chr8.2:11726755-11726774	None:intergenic	30.0%
!!	CCAATTTGTTGTACAAAAAG+TGG	-	chr8.2:11727175-11727194	MS.gene041475:CDS	30.0%
!!!	CCACTTTTTGTACAACAAAT+TGG	+	chr8.2:11727178-11727197	None:intergenic	30.0%
	AATGAATAGCCCCATTACAA+AGG	+	chr8.2:11726874-11726893	None:intergenic	35.0%
	ATGAATAGCCCCATTACAAA+GGG	+	chr8.2:11726873-11726892	None:intergenic	35.0%
	CCCTTATATTCCATCAAACT+TGG	-	chr8.2:11726751-11726770	MS.gene041475:CDS	35.0%
	GAGAAAAACTCCAAGTTTGA+TGG	+	chr8.2:11726764-11726783	None:intergenic	35.0%
	TACTCCGGAATAATCATCAA+CGG	+	chr8.2:11726846-11726865	None:intergenic	35.0%
	TCTCATTGAGAGACAATACA+TGG	-	chr8.2:11726780-11726799	MS.gene041475:CDS	35.0%
	TTGGTGAAGTATGATGACAA+TGG	-	chr8.2:11727235-11727254	MS.gene041475:CDS	35.0%
!	ATTTGTGAACGTATGGATTG+TGG	-	chr8.2:11727001-11727020	MS.gene041475:CDS	35.0%
!	TTGATGATTATTCCGGAGTA+GGG	-	chr8.2:11726846-11726865	MS.gene041475:CDS	35.0%
!	TTTGTAATGGGGCTATTCAT+TGG	-	chr8.2:11726873-11726892	MS.gene041475:CDS	35.0%
!!	GGGAAAAGTACCAAATGTAA+AGG	+	chr8.2:11727156-11727175	None:intergenic	35.0%
!!!	CGGTTTTATTTGTGAACGTA+TGG	-	chr8.2:11726994-11727013	MS.gene041475:CDS	35.0%
	AATTGTAAGGATTCACGTGG+TGG	-	chr8.2:11727280-11727299	MS.gene041475:CDS	40.0%
	ACCACGTGAATCCTTACAAT+TGG	+	chr8.2:11727281-11727300	None:intergenic	40.0%
	ACTCCGGAATAATCATCAAC+GGG	+	chr8.2:11726845-11726864	None:intergenic	40.0%
	ATTTCTCAGTCTATGCGCTA+AGG	-	chr8.2:11727042-11727061	MS.gene041475:CDS	40.0%
	CTGATCATCTCCAAAACCAT+AGG	+	chr8.2:11726714-11726733	None:intergenic	40.0%
	TAATGGGGCTATTCATTGGT+TGG	-	chr8.2:11726877-11726896	MS.gene041475:CDS	40.0%
	TCCAATTGTAAGGATTCACG+TGG	-	chr8.2:11727277-11727296	MS.gene041475:CDS	40.0%
	TTTCTCAGTCTATGCGCTAA+GGG	-	chr8.2:11727043-11727062	MS.gene041475:CDS	40.0%
!	AACGTATGGATTGTGGTTTG+TGG	-	chr8.2:11727008-11727027	MS.gene041475:CDS	40.0%
!	AAGATGGTGGTAGTACAGAA+AGG	-	chr8.2:11727212-11727231	MS.gene041475:CDS	40.0%
!	ACGTATGGATTGTGGTTTGT+GGG	-	chr8.2:11727009-11727028	MS.gene041475:CDS	40.0%
!	GATTGTGGTTTGTGGGTATT+TGG	-	chr8.2:11727016-11727035	MS.gene041475:CDS	40.0%
!!	AGAGCATTGCTCCAATTGTA+AGG	-	chr8.2:11727267-11727286	MS.gene041475:CDS	40.0%
!!	AGTCCCGTTGATGATTATTC+CGG	-	chr8.2:11726839-11726858	MS.gene041475:CDS	40.0%
!!	GTTGATGATTATTCCGGAGT+AGG	-	chr8.2:11726845-11726864	MS.gene041475:CDS	40.0%
	AGTAGGGTCCCTTTGTAATG+GGG	-	chr8.2:11726862-11726881	MS.gene041475:CDS	45.0%
	ATTACAAAGGGACCCTACTC+CGG	+	chr8.2:11726861-11726880	None:intergenic	45.0%
	GAGTAGGGTCCCTTTGTAAT+GGG	-	chr8.2:11726861-11726880	MS.gene041475:CDS	45.0%
	TGGTGGTAGTACAGAAAGGT+TGG	-	chr8.2:11727216-11727235	MS.gene041475:CDS	45.0%
!	TTAAGCTTGCTCATTGCCAC+CGG	+	chr8.2:11727341-11727360	None:intergenic	45.0%
	ATCAACGGGACTGCTACAAG+GGG	+	chr8.2:11726831-11726850	None:intergenic	50.0%
	CATCAACGGGACTGCTACAA+GGG	+	chr8.2:11726832-11726851	None:intergenic	50.0%
	GACTCTTTGCTTTCACTCCC+CGG	-	chr8.2:11727319-11727338	MS.gene041475:CDS	50.0%
	GGAGTAGGGTCCCTTTGTAA+TGG	-	chr8.2:11726860-11726879	MS.gene041475:CDS	50.0%
	TCATCAACGGGACTGCTACA+AGG	+	chr8.2:11726833-11726852	None:intergenic	50.0%
!	TAAGCTTGCTCATTGCCACC+GGG	+	chr8.2:11727340-11727359	None:intergenic	50.0%
	CTGCTACAAGGGGAGTGATC+AGG	+	chr8.2:11726821-11726840	None:intergenic	55.0%
	TCTTTGCTTTCACTCCCCGG+TGG	-	chr8.2:11727322-11727341	MS.gene041475:CDS	55.0%
!	AAGCTTGCTCATTGCCACCG+GGG	+	chr8.2:11727339-11727358	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	11726707	11727360	11726707	ID=MS.gene041475
chr8.2	mRNA	11726707	11727360	11726707	ID=MS.gene041475.t1;Parent=MS.gene041475
chr8.2	exon	11726707	11727360	11726707	ID=MS.gene041475.t1.exon1;Parent=MS.gene041475.t1
chr8.2	CDS	11726707	11727360	11726707	ID=cds.MS.gene041475.t1;Parent=MS.gene041475.t1

Gene Sequence

>MS.gene041475

ATGTCCTATGGTTTTGGAGATGATCAGTCAACAAATCATTACATCCCTTATATTCCATCAAACTTGGAGTTTTTCTCATTGAGAGACAATACATGGAAAGAAATTGAGTGTCCTGATCACTCCCCTTGTAGCAGTCCCGTTGATGATTATTCCGGAGTAGGGTCCCTTTGTAATGGGGCTATTCATTGGTTGGCTTTTCGTGATGATTTAAAAAAGGATGTTATTGTTTCCTTTGATTTAACAGAAAGGAAACTTTTAGATATAGATTTTCCAGATGATTATTATAACGGTTTTATTTGTGAACGTATGGATTGTGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGCGCTAAGGGTTATCGTAATACAACTGAAATATGGGTGATGAAAGAATACAAAGTGAATTCGTCTTGGACTAAGACTCATGTTTTTTCTAATGATGTCCTTTACATTTGGTACTTTTCCCCAATTTGTTGTACAAAAAGTGGTGATATTATTGGAAAAGATGGTGGTAGTACAGAAAGGTTGGTGAAGTATGATGACAATGGACAGTTGCTAGAGCATTGCTCCAATTGTAAGGATTCACGTGGTGGATATACTATGTATACAGACTCTTTGCTTTCACTCCCCGGTGGCAATGAGCAAGCTTAA

Protein sequence

>MS.gene041475.t1

MSYGFGDDQSTNHYIPYIPSNLEFFSLRDNTWKEIECPDHSPCSSPVDDYSGVGSLCNGAIHWLAFRDDLKKDVIVSFDLTERKLLDIDFPDDYYNGFICERMDCGLWVFGEFLSLCAKGYRNTTEIWVMKEYKVNSSWTKTHVFSNDVLYIWYFSPICCTKSGDIIGKDGGSTERLVKYDDNGQLLEHCSNCKDSRGGYTMYTDSLLSLPGGNEQA