AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40986


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40986.t1 MTR_1g055135 65.782 377 112 10 1 363 1 374 6.06e-157 446
MS.gene40986.t1 MTR_1g055250 81.532 222 38 2 130 351 35 253 3.94e-125 363
MS.gene40986.t1 MTR_1g055165 54.372 366 110 7 5 363 2 317 9.98e-120 349
MS.gene40986.t1 MTR_3g103020 54.054 370 152 10 6 363 14 377 7.92e-115 338
MS.gene40986.t1 MTR_4g117750 56.438 365 133 12 10 359 1 354 8.27e-109 327
MS.gene40986.t1 MTR_4g117750 47.015 134 57 5 243 364 350 481 2.73e-24 103
MS.gene40986.t1 MTR_5g097210 52.909 361 154 10 8 359 5 358 2.98e-107 319
MS.gene40986.t1 MTR_1g055195 62.963 297 90 11 76 362 191 477 5.49e-106 320
MS.gene40986.t1 MTR_5g070080 48.469 392 166 11 1 364 1 384 5.50e-103 309
MS.gene40986.t1 MTR_4g117850 50.546 366 154 12 8 357 19 373 1.11e-102 308
MS.gene40986.t1 MTR_4g023080 48.343 362 166 10 10 364 7 354 7.14e-100 300
MS.gene40986.t1 MTR_3g034180 48.825 383 163 14 4 363 116 488 3.28e-99 303
MS.gene40986.t1 MTR_3g034160 48.780 369 173 10 10 363 7 374 6.20e-98 295
MS.gene40986.t1 MTR_4g117770 48.556 381 159 13 4 363 2 366 3.91e-97 293
MS.gene40986.t1 MTR_4g117810 48.556 381 159 13 4 363 2 366 3.91e-97 293
MS.gene40986.t1 MTR_5g070088 49.347 383 154 12 11 360 6 381 1.37e-96 292
MS.gene40986.t1 MTR_3g034130 49.284 349 154 10 10 340 7 350 2.87e-96 291
MS.gene40986.t1 MTR_4g021785 48.626 364 161 13 10 363 7 354 3.05e-96 290
MS.gene40986.t1 MTR_4g023070 46.174 379 167 12 12 364 3 370 6.80e-96 290
MS.gene40986.t1 MTR_6g060650 49.868 379 163 11 6 364 2 373 8.83e-96 290
MS.gene40986.t1 MTR_4g023090 45.910 379 169 14 11 363 15 383 5.96e-95 288
MS.gene40986.t1 MTR_5g070130 48.649 370 163 11 11 360 10 372 8.13e-95 288
MS.gene40986.t1 MTR_4g109280 50.815 368 150 14 11 363 7 358 1.08e-94 286
MS.gene40986.t1 MTR_4g122850 47.500 360 162 12 23 363 12 363 3.91e-94 286
MS.gene40986.t1 MTR_4g117720 49.593 369 124 12 10 360 49 373 1.86e-92 281
MS.gene40986.t1 MTR_4g094365 46.277 376 170 11 6 363 2 363 2.94e-92 281
MS.gene40986.t1 MTR_4g116330 48.361 366 168 13 11 363 22 379 3.75e-92 281
MS.gene40986.t1 MTR_4g117780 47.814 366 167 11 12 363 11 366 7.67e-92 280
MS.gene40986.t1 MTR_4g023120 45.910 379 166 13 12 363 3 369 8.00e-91 277
MS.gene40986.t1 MTR_4g109270 48.021 379 159 15 6 363 2 363 1.16e-89 274
MS.gene40986.t1 MTR_4g023380 43.467 398 166 12 1 364 5 377 2.65e-89 273
MS.gene40986.t1 MTR_4g023130 45.429 361 137 9 10 364 7 313 7.03e-88 268
MS.gene40986.t1 MTR_4g023190 44.828 377 169 12 4 362 2 357 7.53e-87 266
MS.gene40986.t1 MTR_4g023150 45.479 376 169 12 4 362 2 358 1.24e-86 266
MS.gene40986.t1 MTR_8g433040 44.054 370 173 10 8 363 14 363 1.47e-86 266
MS.gene40986.t1 MTR_8g032380 44.054 370 173 10 8 363 14 363 1.47e-86 266
MS.gene40986.t1 MTR_4g118380 47.814 366 147 14 6 338 2 356 8.89e-85 261
MS.gene40986.t1 MTR_4g023200 44.699 349 167 12 26 362 24 358 2.76e-82 255
MS.gene40986.t1 MTR_8g032390 45.205 365 159 12 8 360 36 371 7.20e-82 254
MS.gene40986.t1 MTR_4g023440 43.597 367 141 13 11 363 17 331 2.82e-80 249
MS.gene40986.t1 MTR_1g055175 65.306 196 57 4 175 363 9 200 2.00e-79 242
MS.gene40986.t1 MTR_4g118370 55.144 243 84 7 122 359 33 255 3.39e-76 236
MS.gene40986.t1 MTR_4g116330 43.956 364 148 13 11 363 22 340 1.02e-75 237
MS.gene40986.t1 MTR_8g433030 41.713 362 143 10 8 360 36 338 2.73e-70 223
MS.gene40986.t1 MTR_8g013010 47.940 267 121 8 10 267 52 309 3.34e-65 209
MS.gene40986.t1 MTR_4g121580 40.599 367 173 13 4 354 2 339 1.74e-61 202
MS.gene40986.t1 MTR_4g117870 40.066 302 135 7 70 363 3 266 1.84e-61 198
MS.gene40986.t1 MTR_7g079400 43.581 296 146 11 83 363 47 336 3.00e-59 195
MS.gene40986.t1 MTR_7g079370 39.181 342 181 13 41 360 16 352 3.67e-55 185
MS.gene40986.t1 MTR_4g118400 38.056 360 149 16 6 358 2 294 4.68e-54 180
MS.gene40986.t1 MTR_8g102520 37.057 367 167 15 10 363 6 321 1.06e-52 177
MS.gene40986.t1 MTR_4g116320 48.848 217 97 7 151 359 43 253 2.54e-51 172
MS.gene40986.t1 MTR_2g048580 34.349 361 205 14 10 363 6 341 5.09e-50 171
MS.gene40986.t1 MTR_8g040935 44.286 210 102 7 164 363 3 207 7.24e-44 150
MS.gene40986.t1 MTR_4g116340 42.358 229 99 6 9 226 33 239 4.53e-42 147
MS.gene40986.t1 MTR_6g463430 43.204 206 100 8 165 363 6 201 2.59e-38 136
MS.gene40986.t1 MTR_2g021150 31.398 379 204 15 11 356 13 368 3.09e-37 138
MS.gene40986.t1 MTR_4g114700 36.923 260 100 10 110 355 9 218 2.84e-36 132
MS.gene40986.t1 MTR_4g117530 40.090 222 92 8 143 363 71 252 1.19e-34 128
MS.gene40986.t1 MTR_7g079420 34.672 274 125 11 109 363 905 1143 3.41e-32 128
MS.gene40986.t1 MTR_3g014540 33.962 318 166 16 12 305 29 326 7.41e-32 124
MS.gene40986.t1 MTR_1g094210 29.144 374 218 14 5 356 50 398 3.86e-31 122
MS.gene40986.t1 MTR_7g117720 41.327 196 83 6 11 195 9 183 1.00e-30 118
MS.gene40986.t1 MTR_7g117720 50.575 87 36 3 280 359 186 272 1.90e-13 70.1
MS.gene40986.t1 MTR_1g094210 29.213 356 198 13 5 335 50 376 1.77e-30 120
MS.gene40986.t1 MTR_2g426020 28.756 386 217 16 12 355 6 375 1.10e-29 118
MS.gene40986.t1 MTR_4g118360 56.190 105 40 3 258 358 18 120 3.75e-29 109
MS.gene40986.t1 MTR_3g013770 32.595 316 177 12 12 305 33 334 4.72e-29 116
MS.gene40986.t1 MTR_2g028140 30.931 333 158 15 12 292 5 317 1.35e-28 115
MS.gene40986.t1 MTR_4g055060 30.693 303 183 10 12 297 30 322 1.95e-28 114
MS.gene40986.t1 MTR_1g055145 70.732 82 24 0 15 96 36 117 2.38e-28 112
MS.gene40986.t1 MTR_1g055145 54.651 86 37 2 199 283 118 202 5.78e-18 83.6
MS.gene40986.t1 MTR_2g028130 29.275 345 189 15 12 314 5 336 3.26e-28 114
MS.gene40986.t1 MTR_3g007360 30.124 322 180 15 15 313 55 354 1.11e-27 112
MS.gene40986.t1 MTR_4g061340 30.844 308 174 10 12 297 26 316 1.41e-27 112
MS.gene40986.t1 MTR_3g036290 31.208 298 168 11 12 297 22 294 1.47e-27 111
MS.gene40986.t1 MTR_5g069120 42.458 179 84 6 22 183 1 177 1.63e-27 107
MS.gene40986.t1 MTR_3g014570 31.348 319 176 14 2 297 18 316 4.20e-27 110
MS.gene40986.t1 MTR_3g007410 30.435 322 179 15 15 313 55 354 7.73e-27 110
MS.gene40986.t1 MTR_5g057790 32.237 304 168 15 12 296 46 330 9.05e-27 110
MS.gene40986.t1 MTR_3g006670 31.046 306 164 13 12 292 49 332 1.98e-26 109
MS.gene40986.t1 MTR_4g107820 28.649 370 219 13 12 356 36 385 2.02e-26 108
MS.gene40986.t1 MTR_4g107780 28.649 370 219 13 12 356 36 385 2.02e-26 108
MS.gene40986.t1 MTR_4g107820 28.649 370 219 13 12 356 36 385 2.51e-26 108
MS.gene40986.t1 MTR_7g070880 28.032 371 206 13 2 317 11 375 2.59e-26 109
MS.gene40986.t1 MTR_2g021210 32.990 291 167 13 12 292 84 356 2.84e-26 108
MS.gene40986.t1 MTR_4g107780 28.649 370 219 13 12 356 36 385 3.09e-26 108
MS.gene40986.t1 MTR_3g007330 29.316 307 170 10 12 297 48 328 3.72e-26 108
MS.gene40986.t1 MTR_1g068835 28.613 346 200 13 12 335 4 324 4.46e-26 107
MS.gene40986.t1 MTR_1g097330 31.788 302 175 13 12 299 16 300 4.60e-26 108
MS.gene40986.t1 MTR_2g028160 28.940 349 187 15 12 314 5 338 4.94e-26 108
MS.gene40986.t1 MTR_2g046900 28.618 304 194 10 11 299 27 322 5.98e-26 107
MS.gene40986.t1 MTR_3g007430 31.229 301 170 11 15 296 46 328 6.57e-26 107
MS.gene40986.t1 MTR_3g009240 29.693 293 178 10 12 292 36 312 7.11e-26 107
MS.gene40986.t1 MTR_3g013740 31.310 313 173 15 12 296 44 342 7.56e-26 107
MS.gene40986.t1 MTR_3g009260 30.743 296 162 14 15 292 44 314 1.06e-25 107
MS.gene40986.t1 MTR_4g037465 29.243 383 201 18 4 336 13 375 1.19e-25 107
MS.gene40986.t1 MTR_2g021050 30.159 315 156 13 12 296 5 285 1.26e-25 106
MS.gene40986.t1 MTR_4g117430 42.683 164 74 7 110 267 3 152 2.54e-25 100
MS.gene40986.t1 MTR_1g068875 29.967 307 175 10 12 297 4 291 4.54e-25 105
MS.gene40986.t1 MTR_7g070830 27.123 365 203 12 9 317 18 375 4.74e-25 105
MS.gene40986.t1 MTR_5g057020 31.818 286 168 11 12 291 46 310 5.79e-25 104
MS.gene40986.t1 MTR_1g056710 30.719 306 170 11 12 296 34 318 7.36e-25 104
MS.gene40986.t1 MTR_3g083010 26.764 411 216 18 12 358 6 395 1.10e-24 104
MS.gene40986.t1 MTR_2g021155 30.645 310 182 12 12 304 36 329 1.21e-24 105
MS.gene40986.t1 MTR_5g023000 54.839 93 39 2 274 363 6 98 1.44e-24 96.7
MS.gene40986.t1 MTR_2g028110 28.649 370 208 16 12 344 4 354 1.55e-24 103
MS.gene40986.t1 MTR_1g050542 26.647 334 206 14 12 326 58 371 1.65e-24 103
MS.gene40986.t1 MTR_4g133170 25.595 336 194 12 12 317 4 313 1.88e-24 103
MS.gene40986.t1 MTR_2g426090 29.375 320 172 13 15 297 9 311 2.05e-24 103
MS.gene40986.t1 MTR_1g097490 29.781 366 226 14 5 356 42 390 2.26e-24 103
MS.gene40986.t1 MTR_3g009310 29.316 307 175 11 12 297 42 327 2.90e-24 102
MS.gene40986.t1 MTR_1g097560 28.846 364 214 15 12 356 36 373 3.10e-24 102
MS.gene40986.t1 MTR_5g007610 31.111 315 170 14 12 297 41 337 4.20e-24 102
MS.gene40986.t1 MTR_6g053240 28.477 302 182 10 12 292 28 316 5.01e-24 102
MS.gene40986.t1 MTR_6g053260 29.966 297 179 9 12 292 337 620 6.26e-24 103
MS.gene40986.t1 MTR_2g426070 29.231 325 171 16 13 296 7 313 6.32e-24 102
MS.gene40986.t1 MTR_2g025420 25.564 399 231 13 12 356 6 392 7.43e-24 102
MS.gene40986.t1 MTR_4g070550 29.721 323 169 16 12 292 5 311 7.54e-24 102
MS.gene40986.t1 MTR_2g425980 30.395 329 166 14 12 297 5 313 1.31e-23 101
MS.gene40986.t1 MTR_2g031720 29.545 308 180 11 12 296 6 299 1.41e-23 101
MS.gene40986.t1 MTR_7g066000 28.977 352 190 14 10 317 23 358 1.60e-23 100
MS.gene40986.t1 MTR_2g426060 27.964 329 173 12 12 297 6 313 2.03e-23 100
MS.gene40986.t1 MTR_4g108820 28.197 305 171 10 9 308 39 300 3.64e-23 98.6
MS.gene40986.t1 MTR_2g021190 32.107 299 170 13 12 292 21 304 4.21e-23 99.4
MS.gene40986.t1 MTR_0667s0010 28.319 339 190 14 12 314 6 327 4.29e-23 99.8
MS.gene40986.t1 MTR_4g109290 39.412 170 61 5 11 171 8 144 4.55e-23 95.5
MS.gene40986.t1 MTR_5g057710 31.457 302 173 13 12 296 46 330 4.97e-23 99.8
MS.gene40986.t1 MTR_5g057690 30.272 294 177 12 12 296 46 320 6.06e-23 99.4
MS.gene40986.t1 MTR_7g407070 30.503 318 168 13 12 292 32 333 6.15e-23 99.4
MS.gene40986.t1 MTR_5g022420 25.745 369 234 12 11 356 26 377 1.09e-22 98.2
MS.gene40986.t1 MTR_2g024110 26.791 321 197 12 12 309 4 309 1.64e-22 97.8
MS.gene40986.t1 MTR_7g079450 41.007 139 71 5 230 363 4 136 1.91e-22 92.0
MS.gene40986.t1 MTR_2g046830 29.412 306 187 12 11 302 24 314 2.55e-22 97.4
MS.gene40986.t1 MTR_2g055970 29.355 310 192 14 10 305 209 505 3.53e-22 98.2
MS.gene40986.t1 MTR_1g068860 28.013 307 184 11 12 297 4 294 5.36e-22 96.3
MS.gene40986.t1 MTR_6g080680 27.056 377 207 15 3 336 10 361 5.38e-22 96.7
MS.gene40986.t1 MTR_2g026010 29.915 351 201 15 12 333 4 338 5.43e-22 96.7
MS.gene40986.t1 MTR_5g011200 30.921 304 172 16 12 294 17 303 5.79e-22 96.3
MS.gene40986.t1 MTR_2g047832 27.900 319 195 13 11 302 28 338 6.19e-22 96.7
MS.gene40986.t1 MTR_3g011100 29.904 311 174 14 12 297 235 526 6.39e-22 97.4
MS.gene40986.t1 MTR_8g098830 33.511 188 114 8 175 358 35 215 7.36e-22 93.2
MS.gene40986.t1 MTR_4g031770 29.373 303 179 11 12 296 4 289 1.45e-21 95.1
MS.gene40986.t1 MTR_2g046800 26.687 326 186 9 12 296 14 327 1.48e-21 95.1
MS.gene40986.t1 MTR_8g073550 33.862 189 111 5 11 188 29 214 1.71e-21 92.4
MS.gene40986.t1 MTR_3g007300 29.000 300 154 12 12 297 49 303 2.49e-21 94.4
MS.gene40986.t1 MTR_3g009250 32.432 222 117 9 15 223 44 245 2.82e-21 92.0
MS.gene40986.t1 MTR_1g054575 29.085 306 180 14 12 304 52 333 3.96e-21 95.1
MS.gene40986.t1 MTR_3g036430 26.099 364 209 16 12 356 20 342 4.89e-21 93.2
MS.gene40986.t1 MTR_3g011650 31.982 222 119 9 15 223 82 284 5.43e-21 92.0
MS.gene40986.t1 MTR_8g101580 27.451 357 240 11 12 356 45 394 6.57e-21 93.6
MS.gene40986.t1 MTR_2g031640 28.758 306 181 11 12 296 6 295 6.63e-21 93.2
MS.gene40986.t1 MTR_7g056820 26.389 360 221 13 12 336 7 357 7.60e-21 93.2
MS.gene40986.t1 MTR_6g021880 27.931 290 181 11 23 292 31 312 1.25e-20 92.4
MS.gene40986.t1 MTR_2g031680 26.966 356 207 15 12 336 6 339 1.27e-20 92.4
MS.gene40986.t1 MTR_7g066100 28.931 318 192 11 7 292 6 321 1.62e-20 92.4
MS.gene40986.t1 MTR_6g065980 27.575 301 191 11 12 305 16 296 1.63e-20 92.0
MS.gene40986.t1 MTR_2g046920 27.723 303 190 11 11 299 23 310 1.90e-20 92.0
MS.gene40986.t1 MTR_0242s0060 30.303 330 177 12 7 294 4 322 2.54e-20 92.0
MS.gene40986.t1 MTR_0242s0040 30.303 330 177 12 7 294 4 322 2.54e-20 92.0
MS.gene40986.t1 MTR_5g046260 28.421 285 161 11 12 292 4 249 2.61e-20 90.5
MS.gene40986.t1 MTR_1g088120 26.154 325 199 8 9 297 7 326 2.71e-20 91.7
MS.gene40986.t1 MTR_7g055870 26.286 350 193 13 3 297 6 345 2.87e-20 92.0
MS.gene40986.t1 MTR_8g099460 28.402 338 192 13 12 321 5 320 3.54e-20 91.3
MS.gene40986.t1 MTR_4g023430 53.333 90 41 1 4 92 33 122 4.09e-20 88.2
MS.gene40986.t1 MTR_3g007270 27.044 318 180 12 12 297 47 344 5.48e-20 90.9
MS.gene40986.t1 MTR_7g060940 27.778 324 199 9 6 303 16 330 5.51e-20 90.9
MS.gene40986.t1 MTR_4g122860 32.812 192 92 8 180 363 157 319 5.88e-20 90.1
MS.gene40986.t1 MTR_2g029990 29.412 306 167 14 13 292 52 334 9.66e-20 90.1
MS.gene40986.t1 MTR_7g028660 27.619 315 207 10 9 303 8 321 1.03e-19 89.7
MS.gene40986.t1 MTR_4g013180 26.757 370 223 14 10 338 9 371 1.13e-19 90.5
MS.gene40986.t1 MTR_8g467140 27.508 309 197 11 2 296 22 317 1.38e-19 89.0
MS.gene40986.t1 MTR_4g028660 24.590 366 221 12 6 331 10 360 1.46e-19 89.7
MS.gene40986.t1 MTR_4g027450 24.590 366 221 12 6 331 10 360 1.46e-19 89.7
MS.gene40986.t1 MTR_7g055977 27.187 320 193 8 10 302 5 311 1.50e-19 89.4
MS.gene40986.t1 MTR_3g030250 26.756 299 180 10 12 296 37 310 1.56e-19 89.4
MS.gene40986.t1 MTR_7g070440 27.586 319 181 14 11 297 6 306 1.57e-19 89.4
MS.gene40986.t1 MTR_3g058480 30.396 227 130 8 12 219 39 256 1.83e-19 88.6
MS.gene40986.t1 MTR_4g129190 30.303 231 132 8 12 226 6 223 3.08e-19 88.6
MS.gene40986.t1 MTR_7g055930 26.000 350 194 14 3 297 6 345 3.38e-19 88.6
MS.gene40986.t1 MTR_3g436150 30.063 316 166 17 12 292 32 327 3.84e-19 88.2
MS.gene40986.t1 MTR_6g055210 29.841 315 181 12 11 291 21 329 4.91e-19 88.6
MS.gene40986.t1 MTR_8g464770 27.487 382 228 18 11 358 11 377 5.01e-19 87.8
MS.gene40986.t1 MTR_3g010920 29.617 287 172 12 12 292 44 306 5.37e-19 87.8
MS.gene40986.t1 MTR_3g030330 29.592 294 173 13 12 292 20 292 5.54e-19 87.8
MS.gene40986.t1 MTR_7g066850 24.138 406 241 16 3 356 14 404 6.20e-19 88.2
MS.gene40986.t1 MTR_6g027910 28.796 382 219 17 12 356 9 374 6.48e-19 87.4
MS.gene40986.t1 MTR_4g033495 27.128 376 179 17 9 320 24 368 8.17e-19 87.8
MS.gene40986.t1 MTR_6g079810 26.098 387 215 17 3 336 61 429 8.36e-19 87.8
MS.gene40986.t1 MTR_7g077070 28.440 327 183 14 12 292 16 337 9.77e-19 87.4
MS.gene40986.t1 MTR_7g007300 29.043 303 170 12 12 296 103 378 1.18e-18 87.4
MS.gene40986.t1 MTR_3g023930 27.682 289 173 12 12 292 34 294 1.18e-18 86.7
MS.gene40986.t1 MTR_5g046300 27.645 293 183 10 12 292 4 279 1.26e-18 86.3
MS.gene40986.t1 MTR_5g046290 27.645 293 183 10 12 292 4 279 1.26e-18 86.3
MS.gene40986.t1 MTR_3g058470 26.810 373 207 15 12 356 37 371 1.34e-18 86.7
MS.gene40986.t1 MTR_7g078040 31.176 340 180 14 7 297 4 338 1.48e-18 87.0
MS.gene40986.t1 MTR_2g024100 27.414 321 182 13 19 304 14 318 1.57e-18 86.7
MS.gene40986.t1 MTR_1g055200 60.000 80 29 2 107 183 6 85 1.63e-18 80.5
MS.gene40986.t1 MTR_7g078860 26.852 324 189 10 11 297 8 320 1.75e-18 86.3
MS.gene40986.t1 MTR_2g021252 27.397 292 173 13 15 292 50 316 1.76e-18 86.3
MS.gene40986.t1 MTR_1g442850 26.814 317 178 12 11 292 4 301 3.35e-18 85.5
MS.gene40986.t1 MTR_7g050480 28.296 311 177 12 10 292 20 312 5.17e-18 85.1
MS.gene40986.t1 MTR_3g024150 28.495 372 212 18 15 356 38 385 5.48e-18 84.7
MS.gene40986.t1 MTR_1g037540 28.495 372 211 20 15 336 8 374 6.12e-18 84.7
MS.gene40986.t1 MTR_0128s0010 27.922 308 186 8 12 292 21 319 6.83e-18 84.7
MS.gene40986.t1 MTR_7g077970 28.402 338 186 13 12 304 7 333 7.91e-18 84.7
MS.gene40986.t1 MTR_6g017280 27.019 359 186 18 12 317 9 344 8.16e-18 84.3
MS.gene40986.t1 MTR_8g064890 28.144 334 177 16 2 292 6 319 9.32e-18 84.3
MS.gene40986.t1 MTR_0128s0020 24.873 394 241 12 5 355 11 392 1.06e-17 84.0
MS.gene40986.t1 MTR_5g057643 33.508 191 106 8 12 188 46 229 1.10e-17 82.4
MS.gene40986.t1 MTR_6g048140 29.355 310 165 11 12 292 39 323 1.42e-17 84.0
MS.gene40986.t1 MTR_4g013185 27.711 415 222 18 9 355 7 411 1.62e-17 84.0
MS.gene40986.t1 MTR_0115s0020 28.344 314 189 16 12 292 10 320 1.78e-17 83.6
MS.gene40986.t1 MTR_7g066030 24.557 395 241 13 10 357 19 403 1.96e-17 83.2
MS.gene40986.t1 MTR_8g062660 27.586 319 177 15 3 290 14 309 2.08e-17 84.0
MS.gene40986.t1 MTR_0044s0300 27.961 304 170 13 12 292 38 315 2.96e-17 82.8
MS.gene40986.t1 MTR_7g050520 27.331 311 180 11 10 292 20 312 3.06e-17 82.8
MS.gene40986.t1 MTR_0064s0160 25.693 397 237 17 11 362 41 424 3.78e-17 82.8
MS.gene40986.t1 MTR_7g056290 29.448 326 173 14 15 297 25 336 4.25e-17 82.4
MS.gene40986.t1 MTR_5g096710 29.545 308 180 10 12 292 23 320 4.69e-17 82.0
MS.gene40986.t1 MTR_1g115160 25.773 291 197 9 9 294 19 295 4.82e-17 82.0
MS.gene40986.t1 MTR_1g054725 27.564 312 172 13 11 292 19 306 4.85e-17 82.0
MS.gene40986.t1 MTR_7g057270 26.829 328 184 11 12 297 26 339 5.44e-17 82.0
MS.gene40986.t1 MTR_6g048120 27.097 310 184 9 9 292 33 326 5.55e-17 82.0
MS.gene40986.t1 MTR_2g078900 28.283 297 177 14 12 292 33 309 5.67e-17 81.6
MS.gene40986.t1 MTR_3g072470 31.751 337 150 21 15 297 22 332 5.70e-17 82.0
MS.gene40986.t1 MTR_3g010390 28.571 336 178 16 12 306 33 347 6.51e-17 81.6
MS.gene40986.t1 MTR_6g017270 31.863 204 121 9 7 192 3 206 6.51e-17 81.3
MS.gene40986.t1 MTR_6g004660 25.994 327 206 10 1 300 1 318 7.66e-17 81.3
MS.gene40986.t1 MTR_0267s0050 26.667 345 199 14 15 317 9 341 8.69e-17 81.3
MS.gene40986.t1 MTR_3g083640 29.412 306 161 17 12 292 55 330 9.44e-17 81.3
MS.gene40986.t1 MTR_7g056503 26.234 385 242 17 9 356 18 397 1.00e-16 81.3
MS.gene40986.t1 MTR_6g007135 28.076 317 186 16 8 296 18 320 1.04e-16 81.3
MS.gene40986.t1 MTR_7g017130 29.664 327 176 17 12 296 18 332 1.05e-16 81.3
MS.gene40986.t1 MTR_1g061330 25.201 373 242 13 12 362 4 361 1.13e-16 80.9
MS.gene40986.t1 MTR_7g017170 29.969 327 175 18 12 296 18 332 1.20e-16 81.3
MS.gene40986.t1 MTR_7g013590 30.565 301 167 15 15 292 39 320 1.22e-16 80.9
MS.gene40986.t1 MTR_4g080200 26.554 354 205 15 10 337 1 325 2.09e-16 79.7
MS.gene40986.t1 MTR_5g048160 27.628 333 199 17 12 305 4 333 2.34e-16 80.1
MS.gene40986.t1 MTR_3g030310 25.243 309 180 11 12 292 21 306 2.58e-16 80.1
MS.gene40986.t1 MTR_8g063440 26.239 343 199 15 11 316 11 336 2.69e-16 79.7
MS.gene40986.t1 MTR_4g028510 25.698 358 202 15 20 331 24 363 4.05e-16 79.7
MS.gene40986.t1 MTR_5g069760 25.656 343 215 12 10 324 4 334 4.25e-16 79.3
MS.gene40986.t1 MTR_3g058440 30.769 234 126 10 12 223 35 254 4.39e-16 78.6
MS.gene40986.t1 MTR_3g006530 23.377 308 186 10 12 292 40 324 4.41e-16 79.3
MS.gene40986.t1 MTR_3g010430 28.339 307 170 16 12 292 36 318 4.51e-16 79.3
MS.gene40986.t1 MTR_7g056390 28.354 328 174 15 15 297 21 332 4.53e-16 79.3
MS.gene40986.t1 MTR_3g010870 26.846 298 178 13 12 292 37 311 4.56e-16 79.3
MS.gene40986.t1 MTR_7g056710 25.849 383 218 17 9 347 15 375 4.82e-16 79.0
MS.gene40986.t1 MTR_2g025960 28.112 249 129 13 103 314 1 236 5.37e-16 78.2
MS.gene40986.t1 MTR_6g092560 25.223 337 184 11 1 292 1 314 5.61e-16 79.3
MS.gene40986.t1 MTR_1g055070 30.000 270 141 13 12 247 49 304 6.07e-16 79.0
MS.gene40986.t1 MTR_6g016285 27.445 317 193 12 9 292 18 330 6.08e-16 79.3
MS.gene40986.t1 MTR_3g024040 26.710 307 185 12 18 308 37 319 6.16e-16 78.6
MS.gene40986.t1 MTR_5g023570 41.441 111 60 3 8 117 32 138 6.58e-16 74.3
MS.gene40986.t1 MTR_3g024110 26.333 300 175 12 12 292 101 373 6.62e-16 79.0
MS.gene40986.t1 MTR_1g058190 27.541 305 170 11 10 296 33 304 8.37e-16 78.2
MS.gene40986.t1 MTR_5g069930 25.360 347 204 13 10 317 4 334 8.62e-16 78.2
MS.gene40986.t1 MTR_3g013950 26.136 352 194 14 15 317 9 343 9.38e-16 78.2
MS.gene40986.t1 MTR_5g057040 33.158 190 108 7 12 188 46 229 1.01e-15 79.3
MS.gene40986.t1 MTR_7g056170 24.185 368 195 14 10 317 73 416 1.08e-15 78.6
MS.gene40986.t1 MTR_0128s0070 25.648 386 233 12 12 355 22 395 1.13e-15 78.2
MS.gene40986.t1 MTR_7g066010 27.984 243 138 9 10 222 19 254 1.20e-15 77.8
MS.gene40986.t1 MTR_5g097680 25.490 357 188 12 11 296 16 365 1.54e-15 77.8
MS.gene40986.t1 MTR_4g030830 25.594 379 211 16 12 336 9 370 1.69e-15 77.4
MS.gene40986.t1 MTR_2g006360 27.619 315 152 14 2 299 37 292 1.95e-15 77.0
MS.gene40986.t1 MTR_7g055987 28.875 329 190 16 15 315 23 335 2.01e-15 77.0
MS.gene40986.t1 MTR_7g067680 25.168 298 171 10 12 292 49 311 2.04e-15 77.4
MS.gene40986.t1 MTR_4g028680 26.146 371 214 15 4 331 8 361 2.25e-15 77.0
MS.gene40986.t1 MTR_5g008530 66.102 59 18 1 10 68 16 72 2.27e-15 70.9
MS.gene40986.t1 MTR_1g114700 26.254 339 205 13 12 331 29 341 2.27e-15 77.0
MS.gene40986.t1 MTR_2g104340 26.753 385 239 12 11 357 13 392 2.59e-15 77.0
MS.gene40986.t1 MTR_2g038680 25.604 414 218 18 12 357 16 407 2.69e-15 77.0
MS.gene40986.t1 MTR_7g061050 26.198 313 185 9 10 292 11 307 3.06e-15 76.6
MS.gene40986.t1 MTR_7g078900 26.648 349 189 13 1 297 1 334 3.25e-15 77.0
MS.gene40986.t1 MTR_2g047892 26.562 320 182 13 9 292 19 321 3.56e-15 76.6
MS.gene40986.t1 MTR_3g011060 28.213 319 173 15 12 296 28 324 4.45e-15 76.3
MS.gene40986.t1 MTR_7g062060 25.982 331 199 13 11 300 11 336 5.22e-15 76.3
MS.gene40986.t1 MTR_7g052670 24.543 383 208 16 3 317 12 381 6.03e-15 76.3
MS.gene40986.t1 MTR_1g055055 25.753 299 177 13 12 296 26 293 6.47e-15 75.5
MS.gene40986.t1 MTR_0760s0010 27.586 290 175 13 17 293 52 319 8.15e-15 75.5
MS.gene40986.t1 MTR_3g010970 25.763 295 173 12 15 292 51 316 8.78e-15 75.5
MS.gene40986.t1 MTR_7g055850 27.706 231 122 8 12 201 13 239 9.50e-15 74.3
MS.gene40986.t1 MTR_8g039500 27.855 359 204 17 11 338 11 345 9.94e-15 74.7
MS.gene40986.t1 MTR_2g066170 26.608 342 202 15 11 316 11 339 1.04e-14 75.1
MS.gene40986.t1 MTR_4g014370 25.420 417 220 20 11 357 10 405 1.07e-14 75.1
MS.gene40986.t1 MTR_3g010590 28.814 295 169 14 12 292 39 306 1.09e-14 75.1
MS.gene40986.t1 MTR_7g050490 32.642 193 106 8 10 188 6 188 1.27e-14 72.0
MS.gene40986.t1 MTR_3g006500 26.646 319 179 14 5 296 10 300 1.31e-14 74.7
MS.gene40986.t1 MTR_4g028750 26.870 361 208 15 11 331 15 359 1.42e-14 74.7
MS.gene40986.t1 MTR_7g062100 27.832 309 182 12 12 292 24 319 1.97e-14 74.3
MS.gene40986.t1 MTR_7g061090 29.108 213 111 7 10 192 20 222 1.98e-14 74.3
MS.gene40986.t1 MTR_3g006570 25.574 305 179 12 12 292 21 301 2.13e-14 74.3
MS.gene40986.t1 MTR_3g036335 25.000 308 178 14 12 292 41 322 2.45e-14 73.9
MS.gene40986.t1 MTR_2g047200 23.494 332 201 11 9 303 17 332 2.54e-14 73.9
MS.gene40986.t1 MTR_0464s0020 28.107 338 189 14 5 297 16 344 3.07e-14 73.9
MS.gene40986.t1 MTR_2g104280 26.341 410 218 19 11 357 13 401 3.67e-14 73.6
MS.gene40986.t1 MTR_7g056260 26.115 314 197 7 10 297 12 316 4.06e-14 72.8
MS.gene40986.t1 MTR_7g052150 25.000 320 195 8 9 299 19 322 4.41e-14 73.2
MS.gene40986.t1 MTR_8g012090 26.748 329 175 14 20 316 24 318 4.88e-14 72.8
MS.gene40986.t1 MTR_5g056020 26.190 336 181 15 12 292 17 340 4.88e-14 73.6
MS.gene40986.t1 MTR_1g112930 27.303 304 178 17 7 291 20 299 6.70e-14 72.8
MS.gene40986.t1 MTR_0054s0090 24.495 396 241 15 11 357 16 402 6.94e-14 72.8
MS.gene40986.t1 MTR_4g013175 28.818 347 174 15 9 297 7 338 8.16e-14 72.8
MS.gene40986.t1 MTR_4g011660 31.132 212 101 10 12 192 19 216 8.62e-14 72.4
MS.gene40986.t1 MTR_7g060960 26.455 378 207 13 9 355 29 366 9.41e-14 72.0
MS.gene40986.t1 MTR_0831s0010 27.411 394 214 21 11 357 49 417 9.72e-14 72.4
MS.gene40986.t1 MTR_7g061060 27.329 322 173 14 10 292 11 310 1.08e-13 72.0
MS.gene40986.t1 MTR_3g030240 27.243 301 163 16 12 292 40 304 1.09e-13 72.0
MS.gene40986.t1 MTR_7g079160 25.532 376 209 13 10 317 6 378 1.44e-13 72.0
MS.gene40986.t1 MTR_8g066440 24.011 379 254 14 13 357 24 402 1.50e-13 71.6
MS.gene40986.t1 MTR_7g078840 25.714 350 191 15 7 297 5 344 1.54e-13 71.6
MS.gene40986.t1 MTR_6g086825 25.956 366 213 16 11 331 69 421 1.54e-13 72.0
MS.gene40986.t1 MTR_0129s0070 26.121 379 180 17 15 329 20 362 1.67e-13 71.6
MS.gene40986.t1 MTR_3g010620 25.490 306 172 14 9 292 30 301 1.90e-13 71.2
MS.gene40986.t1 MTR_8g041270 26.196 397 235 18 11 357 14 402 1.91e-13 71.2
MS.gene40986.t1 MTR_4g027370 26.479 355 184 17 12 301 30 372 2.02e-13 71.6
MS.gene40986.t1 MTR_7g069550 25.668 374 213 17 3 326 6 364 2.26e-13 71.2
MS.gene40986.t1 MTR_2g078850 28.000 300 171 17 15 292 33 309 2.31e-13 70.9
MS.gene40986.t1 MTR_3g010520 28.000 300 159 17 12 292 25 286 2.32e-13 70.9
MS.gene40986.t1 MTR_7g077990 23.469 392 247 12 12 364 17 394 2.91e-13 70.9
MS.gene40986.t1 MTR_0649s0020 26.807 332 172 13 9 294 8 314 3.35e-13 70.5
MS.gene40986.t1 MTR_7g056200 26.420 352 188 15 5 317 16 335 3.39e-13 70.5
MS.gene40986.t1 MTR_2g043410 26.596 376 199 15 10 327 20 376 3.76e-13 70.5
MS.gene40986.t1 MTR_4g130330 25.806 372 199 17 11 331 6 351 4.19e-13 70.5
MS.gene40986.t1 MTR_4g006270 26.885 305 169 13 12 296 4 274 4.45e-13 70.5
MS.gene40986.t1 MTR_2g021800 25.304 411 234 19 11 359 15 414 4.84e-13 70.1
MS.gene40986.t1 MTR_2g022000 25.876 371 195 17 11 316 15 370 4.85e-13 70.5
MS.gene40986.t1 MTR_7g056737 29.000 200 117 8 9 192 19 209 4.90e-13 70.1
MS.gene40986.t1 MTR_7g091630 24.074 324 205 12 8 297 28 344 5.17e-13 70.1
MS.gene40986.t1 MTR_7g445890 24.731 372 208 14 4 329 8 353 6.94e-13 69.7
MS.gene40986.t1 MTR_7g056570 25.558 403 212 20 9 357 15 383 7.31e-13 69.7
MS.gene40986.t1 MTR_4g030090 26.923 312 187 14 12 292 14 315 7.56e-13 69.7
MS.gene40986.t1 MTR_4g024890 21.108 379 236 11 11 349 9 364 7.74e-13 69.3
MS.gene40986.t1 MTR_7g056760 26.142 394 236 17 9 356 20 404 9.66e-13 69.3
MS.gene40986.t1 MTR_8g046310 26.110 383 221 18 14 358 17 375 1.28e-12 68.9
MS.gene40986.t1 MTR_6g034720 45.631 103 44 5 147 244 74 169 1.36e-12 66.6
MS.gene40986.t1 MTR_1g055375 27.961 304 183 14 15 296 7 296 1.65e-12 68.6
MS.gene40986.t1 MTR_7g066840 25.846 325 200 14 3 297 14 327 1.67e-12 68.6
MS.gene40986.t1 MTR_7g017040 25.672 409 223 20 11 362 15 399 1.69e-12 68.6
MS.gene40986.t1 MTR_6g004210 26.899 316 176 16 23 296 36 338 2.14e-12 68.2
MS.gene40986.t1 MTR_7g066080 27.586 319 181 13 12 292 16 322 2.17e-12 68.6
MS.gene40986.t1 MTR_8g013005 55.172 58 24 2 308 363 1 58 2.79e-12 61.6
MS.gene40986.t1 MTR_7g061100 30.645 186 94 6 11 192 12 166 2.99e-12 67.4
MS.gene40986.t1 MTR_7g016930 27.445 317 170 17 11 293 15 305 3.33e-12 67.4
MS.gene40986.t1 MTR_3g464500 25.625 320 189 13 11 297 26 329 3.46e-12 67.4
MS.gene40986.t1 MTR_6g004450 27.074 229 138 6 144 355 47 263 3.51e-12 66.6
MS.gene40986.t1 MTR_6g478230 24.000 400 225 19 11 355 26 401 4.26e-12 67.4
MS.gene40986.t1 MTR_3g009300 25.902 305 164 15 15 303 37 295 7.93e-12 66.2
MS.gene40986.t1 MTR_5g069390 26.230 366 192 20 11 317 25 371 9.43e-12 66.6
MS.gene40986.t1 MTR_3g006640 26.852 216 123 7 104 296 17 220 9.80e-12 65.5
MS.gene40986.t1 MTR_7g022600 29.958 237 133 10 12 221 23 253 1.12e-11 66.2
MS.gene40986.t1 MTR_3g007380 35.433 127 72 4 15 135 33 155 1.29e-11 64.3
MS.gene40986.t1 MTR_3g009290 25.714 245 140 11 12 238 35 255 2.00e-11 63.9
MS.gene40986.t1 MTR_6g460450 35.294 119 69 3 4 115 21 138 2.47e-11 61.6
MS.gene40986.t1 MTR_1g029650 23.780 328 198 12 9 300 5 316 2.83e-11 64.7
MS.gene40986.t1 MTR_3g437520 26.316 342 193 14 5 297 16 347 3.19e-11 64.7
MS.gene40986.t1 MTR_5g024260 26.720 378 202 21 4 331 14 366 4.20e-11 64.3
MS.gene40986.t1 MTR_4g030980 24.571 350 196 12 12 300 15 357 4.37e-11 64.3
MS.gene40986.t1 MTR_6g013270 25.962 312 184 16 9 294 26 316 5.25e-11 63.9
MS.gene40986.t1 MTR_7g037670 30.500 200 94 7 12 192 23 196 5.88e-11 63.5
MS.gene40986.t1 MTR_3g464470 24.841 314 196 11 11 297 6 306 6.78e-11 63.5
MS.gene40986.t1 MTR_8g064790 24.370 357 200 12 11 347 14 320 8.58e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40986.t1 AT3G23880 30.565 301 182 9 9 294 11 299 1.10e-25 106
MS.gene40986.t1 AT3G06240 26.764 411 234 16 4 361 28 424 4.38e-24 102
MS.gene40986.t1 AT4G12560 28.221 326 187 14 12 306 4 313 1.12e-21 95.9
MS.gene40986.t1 AT4G12560 28.221 326 187 14 12 306 4 313 1.12e-21 95.9
MS.gene40986.t1 AT4G12560 28.221 326 187 14 12 306 4 313 1.12e-21 95.9
MS.gene40986.t1 AT5G49610 28.261 368 202 20 13 350 10 345 1.64e-18 86.3
MS.gene40986.t1 AT1G33530 27.336 289 185 10 12 293 97 367 7.78e-18 84.7
MS.gene40986.t1 AT1G30790 27.554 323 178 16 4 292 3 303 6.78e-17 81.6
MS.gene40986.t1 AT3G16210 25.987 304 181 11 11 302 4 275 1.31e-16 80.5
MS.gene40986.t1 AT4G22390 24.194 372 241 14 13 355 5 364 1.52e-15 77.8
MS.gene40986.t1 AT4G22390 24.194 372 241 14 13 355 5 364 1.74e-15 77.8
MS.gene40986.t1 AT4G19930 25.868 317 187 10 11 296 42 341 3.27e-15 77.0
MS.gene40986.t1 AT3G17540 26.578 301 165 13 12 283 10 283 1.56e-14 74.7
MS.gene40986.t1 AT1G12870 22.703 370 223 13 12 341 33 379 6.67e-14 72.8
MS.gene40986.t1 AT3G07870 24.611 321 200 12 12 304 28 334 6.76e-14 72.8
MS.gene40986.t1 AT2G21930 27.211 294 188 13 12 292 25 305 1.26e-13 72.0
MS.gene40986.t1 AT3G20690 27.760 317 184 16 12 304 6 301 7.62e-13 69.3
MS.gene40986.t1 AT3G10430 28.287 251 152 11 12 250 5 239 8.99e-13 69.3
MS.gene40986.t1 AT3G21120 21.176 255 178 5 10 250 1 246 1.43e-12 68.6
MS.gene40986.t1 AT1G11270 28.641 206 119 9 5 192 28 223 4.01e-12 65.5
MS.gene40986.t1 AT2G40925 23.642 313 192 11 12 296 27 320 4.74e-12 67.4
MS.gene40986.t1 AT1G11270 27.481 262 151 12 5 245 28 271 9.46e-12 65.9
MS.gene40986.t1 AT1G11270 27.481 262 151 12 5 245 28 271 9.46e-12 65.9
MS.gene40986.t1 AT1G70960 25.166 302 190 14 12 295 9 292 1.87e-11 65.1
MS.gene40986.t1 AT3G49980 25.974 308 200 13 10 300 3 299 2.19e-11 65.1
MS.gene40986.t1 AT3G49980 25.974 308 200 13 10 300 4 300 2.30e-11 65.1
MS.gene40986.t1 AT3G16590 29.102 323 176 19 9 303 2 299 2.35e-11 65.1
MS.gene40986.t1 AT3G17530 23.871 310 197 12 12 299 6 298 3.11e-11 64.7
MS.gene40986.t1 AT5G50220 25.472 318 177 14 12 317 33 302 3.99e-11 64.3
MS.gene40986.t1 AT3G08750 26.374 182 123 4 12 190 12 185 8.84e-11 63.2

Find 83 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGTTTGTGAACAAAATT+AGG 0.079986 1.3:-40690010 None:intergenic
GGTCTACAGATTATAGTTTA+TGG 0.136586 1.3:+40690488 MS.gene40986:CDS
CGTTCAAATTTCTGTGGTTT+TGG 0.137814 1.3:+40690157 MS.gene40986:CDS
GATTTACCTATCAAAATTAT+AGG 0.185322 1.3:+40690031 MS.gene40986:CDS
TCCCAAATGACATTGAATTT+TGG 0.195929 1.3:+40690467 MS.gene40986:CDS
TTAGAGGATTTCTCAGTCTA+TGG 0.277856 1.3:+40690515 MS.gene40986:CDS
AAACAAATACCTTATTATAA+TGG 0.285901 1.3:+40690127 MS.gene40986:CDS
AGACGATTACTTGGTAGTTT+TGG 0.295398 1.3:+40690195 MS.gene40986:CDS
GACCAAAATTCAATGTCATT+TGG 0.299805 1.3:-40690469 None:intergenic
TGTAGTGAGGTCCCGTGTTC+TGG 0.304158 1.3:+40690319 MS.gene40986:CDS
CCGGTAACCTCACTAAGATT+TGG 0.304205 1.3:-40689787 None:intergenic
ACAAGGACAGAGTTGATATA+TGG 0.325314 1.3:+40690548 MS.gene40986:CDS
GTCTACAGATTATAGTTTAT+GGG 0.327548 1.3:+40690489 MS.gene40986:CDS
CAAGTTTGTGAACAAAATTA+GGG 0.337199 1.3:-40690009 None:intergenic
ACCAAAATTCAATGTCATTT+GGG 0.340283 1.3:-40690468 None:intergenic
TTAATCTTGCTCACCGGCAC+TGG 0.340924 1.3:-40690806 None:intergenic
TGTTGCAGCCTTTCATTTAA+CGG 0.348165 1.3:+40690420 MS.gene40986:CDS
TATAGTTTATGGGTATTTAG+AGG 0.355913 1.3:+40690499 MS.gene40986:CDS
GATAGCACATAATCTGAGTT+TGG 0.381898 1.3:-40690229 None:intergenic
GGATTCCATAGGTAAATGTT+TGG 0.387131 1.3:-40690088 None:intergenic
CCAAATCTTAGTGAGGTTAC+CGG 0.387878 1.3:+40689787 MS.gene40986:CDS
CGGTAACCTCACTAAGATTT+GGG 0.387902 1.3:-40689786 None:intergenic
GTGGTAGAGTCGGTCTTCAA+TGG 0.402307 1.3:+40690355 MS.gene40986:CDS
TGGTAGAGTCGGTCTTCAAT+GGG 0.407871 1.3:+40690356 MS.gene40986:CDS
TGAACTTCGATCCATAGCTT+TGG 0.408425 1.3:+40689946 MS.gene40986:CDS
GGACCTCACTACAAGGCAAA+TGG 0.426979 1.3:-40690309 None:intergenic
TCTTCAATGGGGCTATTCAT+TGG 0.427190 1.3:+40690368 MS.gene40986:CDS
AATACAATGTGCAGTCATCT+TGG 0.431583 1.3:+40690581 MS.gene40986:CDS
GACCTCACTACAAGGCAAAT+GGG 0.437215 1.3:-40690308 None:intergenic
CATGGATGCGGAAGCGGAGG+TGG 0.438653 1.3:+40689733 None:intergenic
TGTTGAACCTTTACAATAGT+AGG 0.441014 1.3:-40690746 None:intergenic
TAATCTTGCTCACCGGCACT+GGG 0.441873 1.3:-40690805 None:intergenic
TAATGTAGGAGCAGAATTAT+CGG 0.462658 1.3:-40689981 None:intergenic
TGATCGCATGGATGCGGAAG+CGG 0.472520 1.3:+40689727 None:intergenic
AATCGAATAAGAGACTTAAC+CGG 0.473178 1.3:-40689806 None:intergenic
AAATTAGGGTTGAGTAATGT+AGG 0.479104 1.3:-40689995 None:intergenic
TTTCCTTTCCGTTAAATGAA+AGG 0.480038 1.3:-40690428 None:intergenic
CTGCTTTCACTCCCCAGTGC+CGG 0.489225 1.3:+40690793 MS.gene40986:CDS
CTTATCCAAACATTTACCTA+TGG 0.489607 1.3:+40690083 MS.gene40986:CDS
TAGAGGATTTCTCAGTCTAT+GGG 0.489737 1.3:+40690516 MS.gene40986:CDS
TCAAATCCGTTTCCAAGTCA+TGG 0.490166 1.3:+40689828 MS.gene40986:CDS
AAACAATGAATCCAAAGCTA+TGG 0.500070 1.3:-40689957 None:intergenic
CAAGGACAGAGTTGATATAT+GGG 0.506193 1.3:+40690549 MS.gene40986:CDS
ATTGGAACAAGTAGCCGTAC+TGG 0.508866 1.3:+40690682 MS.gene40986:CDS
CAGCCTTTCATTTAACGGAA+AGG 0.512645 1.3:+40690425 MS.gene40986:CDS
AACTGTGAATTTGCAAAACT+AGG 0.518550 1.3:-40689869 None:intergenic
AGGTATTTGTTTGTGAACTC+CGG 0.522279 1.3:-40690116 None:intergenic
AATTCATGAGGCAGATAAAG+TGG 0.532852 1.3:-40689758 None:intergenic
GAGCATACCTACTATTGTAA+AGG 0.535135 1.3:+40690739 MS.gene40986:CDS
TCCCCATTTGCCTTGTAGTG+AGG 0.535942 1.3:+40690306 MS.gene40986:CDS
AAAATTATAGGTTCATGTAG+AGG 0.543548 1.3:+40690043 MS.gene40986:CDS
TGAGTCAAAAGACGATTACT+TGG 0.549837 1.3:+40690186 MS.gene40986:CDS
AAATTATAGGTTCATGTAGA+GGG 0.550046 1.3:+40690044 MS.gene40986:CDS
AATTCAATGTCATTTGGGAG+AGG 0.550093 1.3:-40690463 None:intergenic
AGAAAACCATGACTTGGAAA+CGG 0.552049 1.3:-40689834 None:intergenic
TGATTATCCCGTGGTAGAGT+CGG 0.558584 1.3:+40690345 MS.gene40986:CDS
ATGAATTGATCGCATGGATG+CGG 0.560598 1.3:+40689721 None:intergenic
ATCTTCTTAATCTTGCTCAC+CGG 0.570478 1.3:-40690812 None:intergenic
ATTATGTGCTATCTCGCTTG+AGG 0.570663 1.3:+40690239 MS.gene40986:CDS
GCGAGGAATGGTAGTATCCA+TGG 0.572049 1.3:-40690623 None:intergenic
TGTTTGTGAACTCCGGTGGA+TGG 0.577672 1.3:-40690109 None:intergenic
CATATCTAATCAATCCAGTA+CGG 0.579641 1.3:-40690696 None:intergenic
AATAAGAGAAAACCATGACT+TGG 0.585230 1.3:-40689840 None:intergenic
GAACACGGGACCTCACTACA+AGG 0.596183 1.3:-40690316 None:intergenic
TACCTATGGAATCCATCCAC+CGG 0.599416 1.3:+40690097 MS.gene40986:CDS
TTGATTAGATATGATGACGA+AGG 0.602631 1.3:+40690706 MS.gene40986:CDS
TCGCATGGATGCGGAAGCGG+AGG 0.605064 1.3:+40689730 None:intergenic
TTCTGGTTCTGATTATCCCG+TGG 0.608593 1.3:+40690336 MS.gene40986:CDS
ACCTCACTACAAGGCAAATG+GGG 0.617066 1.3:-40690307 None:intergenic
TTGAAGACCGACTCTACCAC+GGG 0.617081 1.3:-40690352 None:intergenic
TCTCATTGAGAGCTAATGCG+TGG 0.627280 1.3:+40690266 MS.gene40986:CDS
GGGGAGTGAAAGCAGAGACT+CGG 0.639121 1.3:-40690785 None:intergenic
ATTGAAGACCGACTCTACCA+CGG 0.640938 1.3:-40690353 None:intergenic
TATTTGTTTGTGAACTCCGG+TGG 0.640963 1.3:-40690113 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.641792 1.3:-40690099 None:intergenic
GGATAATCAGAACCAGAACA+CGG 0.646909 1.3:-40690331 None:intergenic
TGATCGCCCAAATCTTAGTG+AGG 0.652587 1.3:+40689780 MS.gene40986:CDS
TAAAACTCTTGTTCTCACCA+TGG 0.659651 1.3:+40690606 MS.gene40986:CDS
ATTTGGGCGATCAATTCATG+AGG 0.675850 1.3:-40689770 None:intergenic
TCACTACAAGGCAAATGGGG+AGG 0.676482 1.3:-40690304 None:intergenic
GGTAGAGTCGGTCTTCAATG+GGG 0.683123 1.3:+40690357 MS.gene40986:CDS
GATAATCAGAACCAGAACAC+GGG 0.690279 1.3:-40690330 None:intergenic
AATCTTGCTCACCGGCACTG+GGG 0.734770 1.3:-40690804 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAATACCTTATTATAA+TGG + chr1.3:40690127-40690146 MS.gene40986:CDS 15.0%
!! GATTTACCTATCAAAATTAT+AGG + chr1.3:40690031-40690050 MS.gene40986:CDS 20.0%
! AAAATTATAGGTTCATGTAG+AGG + chr1.3:40690043-40690062 MS.gene40986:CDS 25.0%
! AAATTATAGGTTCATGTAGA+GGG + chr1.3:40690044-40690063 MS.gene40986:CDS 25.0%
! AGAAAAAGTGGTGATATTAT+TGG + chr1.3:40690664-40690683 MS.gene40986:CDS 25.0%
! CAAGTTTGTGAACAAAATTA+GGG - chr1.3:40690012-40690031 None:intergenic 25.0%
! CGTGAAAAACCATTATAATA+AGG - chr1.3:40690139-40690158 None:intergenic 25.0%
! GTCTACAGATTATAGTTTAT+GGG + chr1.3:40690489-40690508 MS.gene40986:CDS 25.0%
! TATAGTTTATGGGTATTTAG+AGG + chr1.3:40690499-40690518 MS.gene40986:CDS 25.0%
! TCAAGTTTGTGAACAAAATT+AGG - chr1.3:40690013-40690032 None:intergenic 25.0%
!! ACCAAAATTCAATGTCATTT+GGG - chr1.3:40690471-40690490 None:intergenic 25.0%
!!! CATGAACCTATAATTTTGAT+AGG - chr1.3:40690040-40690059 None:intergenic 25.0%
AAACAATGAATCCAAAGCTA+TGG - chr1.3:40689960-40689979 None:intergenic 30.0%
AAATTAGGGTTGAGTAATGT+AGG - chr1.3:40689998-40690017 None:intergenic 30.0%
AACTGTGAATTTGCAAAACT+AGG - chr1.3:40689872-40689891 None:intergenic 30.0%
AATAAGAGAAAACCATGACT+TGG - chr1.3:40689843-40689862 None:intergenic 30.0%
AATCGAATAAGAGACTTAAC+CGG - chr1.3:40689809-40689828 None:intergenic 30.0%
CATATCTAATCAATCCAGTA+CGG - chr1.3:40690699-40690718 None:intergenic 30.0%
CTTATCCAAACATTTACCTA+TGG + chr1.3:40690083-40690102 MS.gene40986:CDS 30.0%
GACCAAAATTCAATGTCATT+TGG - chr1.3:40690472-40690491 None:intergenic 30.0%
GGTCTACAGATTATAGTTTA+TGG + chr1.3:40690488-40690507 MS.gene40986:CDS 30.0%
TAATGTAGGAGCAGAATTAT+CGG - chr1.3:40689984-40690003 None:intergenic 30.0%
TGTTGAACCTTTACAATAGT+AGG - chr1.3:40690749-40690768 None:intergenic 30.0%
TTTCCTTTCCGTTAAATGAA+AGG - chr1.3:40690431-40690450 None:intergenic 30.0%
! GTTCAAATTTCTGTGGTTTT+GGG + chr1.3:40690158-40690177 MS.gene40986:CDS 30.0%
! TCCCAAATGACATTGAATTT+TGG + chr1.3:40690467-40690486 MS.gene40986:CDS 30.0%
! TTGATTAGATATGATGACGA+AGG + chr1.3:40690706-40690725 MS.gene40986:CDS 30.0%
! TTTTCACGTTCAAATTTCTG+TGG + chr1.3:40690151-40690170 MS.gene40986:CDS 30.0%
!! ACTTTTTCTACAACAAATGG+GGG - chr1.3:40690653-40690672 None:intergenic 30.0%
!!! ACCACTTTTTCTACAACAAA+TGG - chr1.3:40690656-40690675 None:intergenic 30.0%
!!! CACTTTTTCTACAACAAATG+GGG - chr1.3:40690654-40690673 None:intergenic 30.0%
!!! CCACTTTTTCTACAACAAAT+GGG - chr1.3:40690655-40690674 None:intergenic 30.0%
AATACAATGTGCAGTCATCT+TGG + chr1.3:40690581-40690600 MS.gene40986:CDS 35.0%
AATTCATGAGGCAGATAAAG+TGG - chr1.3:40689761-40689780 None:intergenic 35.0%
AGGTATTTGTTTGTGAACTC+CGG - chr1.3:40690119-40690138 None:intergenic 35.0%
GAGCATACCTACTATTGTAA+AGG + chr1.3:40690739-40690758 MS.gene40986:CDS 35.0%
GATAGCACATAATCTGAGTT+TGG - chr1.3:40690232-40690251 None:intergenic 35.0%
GGATTCCATAGGTAAATGTT+TGG - chr1.3:40690091-40690110 None:intergenic 35.0%
TAAAACTCTTGTTCTCACCA+TGG + chr1.3:40690606-40690625 MS.gene40986:CDS 35.0%
TAGAGGATTTCTCAGTCTAT+GGG + chr1.3:40690516-40690535 MS.gene40986:CDS 35.0%
TGAGTCAAAAGACGATTACT+TGG + chr1.3:40690186-40690205 MS.gene40986:CDS 35.0%
TGTTGCAGCCTTTCATTTAA+CGG + chr1.3:40690420-40690439 MS.gene40986:CDS 35.0%
TTAGAGGATTTCTCAGTCTA+TGG + chr1.3:40690515-40690534 MS.gene40986:CDS 35.0%
! AATTCAATGTCATTTGGGAG+AGG - chr1.3:40690466-40690485 None:intergenic 35.0%
! AGAAAACCATGACTTGGAAA+CGG - chr1.3:40689837-40689856 None:intergenic 35.0%
! CGTTCAAATTTCTGTGGTTT+TGG + chr1.3:40690157-40690176 MS.gene40986:CDS 35.0%
! TCAGCTTTTCGTTATGAGAT+AGG + chr1.3:40690391-40690410 MS.gene40986:CDS 35.0%
!! ACAAGGACAGAGTTGATATA+TGG + chr1.3:40690548-40690567 MS.gene40986:CDS 35.0%
!! AGACGATTACTTGGTAGTTT+TGG + chr1.3:40690195-40690214 MS.gene40986:CDS 35.0%
!! CAAGGACAGAGTTGATATAT+GGG + chr1.3:40690549-40690568 MS.gene40986:CDS 35.0%
!! CCCATTTGTTGTAGAAAAAG+TGG + chr1.3:40690652-40690671 MS.gene40986:CDS 35.0%
ATTATGTGCTATCTCGCTTG+AGG + chr1.3:40690239-40690258 MS.gene40986:CDS 40.0%
ATTTGGGCGATCAATTCATG+AGG - chr1.3:40689773-40689792 None:intergenic 40.0%
CAGCCTTTCATTTAACGGAA+AGG + chr1.3:40690425-40690444 MS.gene40986:CDS 40.0%
CCAAATCTTAGTGAGGTTAC+CGG + chr1.3:40689787-40689806 MS.gene40986:CDS 40.0%
CGGTAACCTCACTAAGATTT+GGG - chr1.3:40689789-40689808 None:intergenic 40.0%
GATAATCAGAACCAGAACAC+GGG - chr1.3:40690333-40690352 None:intergenic 40.0%
GGATAATCAGAACCAGAACA+CGG - chr1.3:40690334-40690353 None:intergenic 40.0%
TATTTGTTTGTGAACTCCGG+TGG - chr1.3:40690116-40690135 None:intergenic 40.0%
TCAAATCCGTTTCCAAGTCA+TGG + chr1.3:40689828-40689847 MS.gene40986:CDS 40.0%
TCTTCAATGGGGCTATTCAT+TGG + chr1.3:40690368-40690387 MS.gene40986:CDS 40.0%
TGAACTTCGATCCATAGCTT+TGG + chr1.3:40689946-40689965 MS.gene40986:CDS 40.0%
! TTCTCAGTCTATGGGTTTTG+AGG + chr1.3:40690524-40690543 MS.gene40986:CDS 40.0%
!!! TCTATGGGTTTTGAGGTACA+AGG + chr1.3:40690531-40690550 MS.gene40986:CDS 40.0%
ACCTCACTACAAGGCAAATG+GGG - chr1.3:40690310-40690329 None:intergenic 45.0%
ATTGGAACAAGTAGCCGTAC+TGG + chr1.3:40690682-40690701 MS.gene40986:CDS 45.0%
CCGGTAACCTCACTAAGATT+TGG - chr1.3:40689790-40689809 None:intergenic 45.0%
GACCTCACTACAAGGCAAAT+GGG - chr1.3:40690311-40690330 None:intergenic 45.0%
TACCTATGGAATCCATCCAC+CGG + chr1.3:40690097-40690116 MS.gene40986:CDS 45.0%
TCTCATTGAGAGCTAATGCG+TGG + chr1.3:40690266-40690285 MS.gene40986:CDS 45.0%
TGATCGCCCAAATCTTAGTG+AGG + chr1.3:40689780-40689799 MS.gene40986:CDS 45.0%
TGATTATCCCGTGGTAGAGT+CGG + chr1.3:40690345-40690364 MS.gene40986:CDS 45.0%
TGGTAGAGTCGGTCTTCAAT+GGG + chr1.3:40690356-40690375 MS.gene40986:CDS 45.0%
! ATTGAAGACCGACTCTACCA+CGG - chr1.3:40690356-40690375 None:intergenic 45.0%
!! TTCTGGTTCTGATTATCCCG+TGG + chr1.3:40690336-40690355 MS.gene40986:CDS 45.0%
AATGGGGGAAATGCGAGGAA+TGG - chr1.3:40690638-40690657 None:intergenic 50.0%
CAACAAATGGGGGAAATGCG+AGG - chr1.3:40690643-40690662 None:intergenic 50.0%
GCGAGGAATGGTAGTATCCA+TGG - chr1.3:40690626-40690645 None:intergenic 50.0%
GGACCTCACTACAAGGCAAA+TGG - chr1.3:40690312-40690331 None:intergenic 50.0%
GGTAGAGTCGGTCTTCAATG+GGG + chr1.3:40690357-40690376 MS.gene40986:CDS 50.0%
GTGGTAGAGTCGGTCTTCAA+TGG + chr1.3:40690355-40690374 MS.gene40986:CDS 50.0%
TAATCTTGCTCACCGGCACT+GGG - chr1.3:40690808-40690827 None:intergenic 50.0%
TCACTACAAGGCAAATGGGG+AGG - chr1.3:40690307-40690326 None:intergenic 50.0%
TCCCCATTTGCCTTGTAGTG+AGG + chr1.3:40690306-40690325 MS.gene40986:CDS 50.0%
TGTTTGTGAACTCCGGTGGA+TGG - chr1.3:40690112-40690131 None:intergenic 50.0%
TTAATCTTGCTCACCGGCAC+TGG - chr1.3:40690809-40690828 None:intergenic 50.0%
! TTGAAGACCGACTCTACCAC+GGG - chr1.3:40690355-40690374 None:intergenic 50.0%
AATCTTGCTCACCGGCACTG+GGG - chr1.3:40690807-40690826 None:intergenic 55.0%
GAACACGGGACCTCACTACA+AGG - chr1.3:40690319-40690338 None:intergenic 55.0%
GGGGAGTGAAAGCAGAGACT+CGG - chr1.3:40690788-40690807 None:intergenic 55.0%
TGTAGTGAGGTCCCGTGTTC+TGG + chr1.3:40690319-40690338 MS.gene40986:CDS 55.0%
! CTCCGGTGGATGGATTCCAT+AGG - chr1.3:40690102-40690121 None:intergenic 55.0%
CTGCTTTCACTCCCCAGTGC+CGG + chr1.3:40690793-40690812 MS.gene40986:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 40689734 40690828 40689734 ID=MS.gene40986
chr1.3 mRNA 40689734 40690828 40689734 ID=MS.gene40986.t1;Parent=MS.gene40986
chr1.3 exon 40689734 40690828 40689734 ID=MS.gene40986.t1.exon1;Parent=MS.gene40986.t1
chr1.3 CDS 40689734 40690828 40689734 ID=cds.MS.gene40986.t1;Parent=MS.gene40986.t1
Gene Sequence

>MS.gene40986

ATGGATGCGGAAGCGGAGGTGGATCCACTTTATCTGCCTCATGAATTGATCGCCCAAATCTTAGTGAGGTTACCGGTTAAGTCTCTTATTCGATTCAAATCCGTTTCCAAGTCATGGTTTTCTCTTATTTCAAATCCTAGTTTTGCAAATTCACAGTTTCAGATTACTGCTGCAACACACACTCGTCGAATTCTGTTCGTAACAGAAACTTCTGAACTTCGATCCATAGCTTTGGATTCATTGTTTACCGATAATTCTGCTCCTACATTACTCAACCCTAATTTTGTTCACAAACTTGATTTACCTATCAAAATTATAGGTTCATGTAGAGGGTTCATATTTTTGTACTCTTATCCAAACATTTACCTATGGAATCCATCCACCGGAGTTCACAAACAAATACCTTATTATAATGGTTTTTCACGTTCAAATTTCTGTGGTTTTGGGTATGATGAGTCAAAAGACGATTACTTGGTAGTTTTGGTATTCTATATTCCAAACTCAGATTATGTGCTATCTCGCTTGAGGATTTTCTCATTGAGAGCTAATGCGTGGAACGAAATTGTGAGTCCTCCCCATTTGCCTTGTAGTGAGGTCCCGTGTTCTGGTTCTGATTATCCCGTGGTAGAGTCGGTCTTCAATGGGGCTATTCATTGGTCAGCTTTTCGTTATGAGATAGGTTTCTTTGTTGCAGCCTTTCATTTAACGGAAAGGAAACTTCTAGAGATTCCTCTCCCAAATGACATTGAATTTTGGTCTACAGATTATAGTTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTTGAGGTACAAGGACAGAGTTGATATATGGGTGATGAAAGAATACAATGTGCAGTCATCTTGGACTAAAACTCTTGTTCTCACCATGGATACTACCATTCCTCGCATTTCCCCCATTTGTTGTAGAAAAAGTGGTGATATTATTGGAACAAGTAGCCGTACTGGATTGATTAGATATGATGACGAAGGAGAGTATCTAGAGCATACCTACTATTGTAAAGGTTCAACATACGTGTCTATTTATACCGAGTCTCTGCTTTCACTCCCCAGTGCCGGTGAGCAAGATTAA

Protein sequence

>MS.gene40986.t1

MDAEAEVDPLYLPHELIAQILVRLPVKSLIRFKSVSKSWFSLISNPSFANSQFQITAATHTRRILFVTETSELRSIALDSLFTDNSAPTLLNPNFVHKLDLPIKIIGSCRGFIFLYSYPNIYLWNPSTGVHKQIPYYNGFSRSNFCGFGYDESKDDYLVVLVFYIPNSDYVLSRLRIFSLRANAWNEIVSPPHLPCSEVPCSGSDYPVVESVFNGAIHWSAFRYEIGFFVAAFHLTERKLLEIPLPNDIEFWSTDYSLWVFRGFLSLWVLRYKDRVDIWVMKEYNVQSSWTKTLVLTMDTTIPRISPICCRKSGDIIGTSSRTGLIRYDDEGEYLEHTYYCKGSTYVSIYTESLLSLPSAGEQD