AlfalfaGEDB | MS.gene24826

M. sativa cultivar XinJiangDaYe / MS.gene24826

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24826.t1	RHN76723.1	49	261	101	6	62	294	4	260	2.60E-56	229.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24826.t1	Q9LIR8	25.9	286	177	11	8	273	17	287	5.8e-12	73.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24826.t1	A0A396JKA9	49.0	261	101	6	62	294	4	260	1.9e-56	229.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene24826	MS.gene061240	PPI
MS.gene033443	MS.gene24826	PPI
MS.gene54049	MS.gene24826	PPI
MS.gene50337	MS.gene24826	PPI
MS.gene43789	MS.gene24826	PPI
MS.gene57528	MS.gene24826	PPI
MS.gene24826	MS.gene041473	PPI
MS.gene24826	MS.gene50311	PPI
MS.gene50332	MS.gene24826	PPI
MS.gene24826	MS.gene035234	PPI
MS.gene24826	MS.gene058989	PPI
MS.gene072177	MS.gene24826	PPI
MS.gene58722	MS.gene24826	PPI
MS.gene064091	MS.gene24826	PPI
MS.gene24826	MS.gene57538	PPI
MS.gene064112	MS.gene24826	PPI
MS.gene24826	MS.gene041468	PPI
MS.gene045476	MS.gene24826	PPI
MS.gene24826	MS.gene058693	PPI
MS.gene24208	MS.gene24826	PPI
MS.gene061241	MS.gene24826	PPI
MS.gene50307	MS.gene24826	PPI
MS.gene24213	MS.gene24826	PPI
MS.gene24826	MS.gene041395	PPI
MS.gene43796	MS.gene24826	PPI
MS.gene044429	MS.gene24826	PPI
MS.gene24826	MS.gene42447	PPI
MS.gene24826	MS.gene51189	PPI
MS.gene85454	MS.gene24826	PPI
MS.gene58312	MS.gene24826	PPI
MS.gene51191	MS.gene24826	PPI
MS.gene24826	MS.gene044425	PPI
MS.gene58313	MS.gene24826	PPI
MS.gene24826	MS.gene85454	PPI
MS.gene066622	MS.gene24826	PPI
MS.gene44887	MS.gene24826	PPI
MS.gene85043	MS.gene24826	PPI
MS.gene39265	MS.gene24826	PPI
MS.gene033430	MS.gene24826	PPI
MS.gene24826	MS.gene40988	PPI
MS.gene24826	MS.gene59637	PPI
MS.gene24826	MS.gene24173	PPI
MS.gene036583	MS.gene24826	PPI
MS.gene88780	MS.gene24826	PPI
MS.gene24826	MS.gene27022	PPI
MS.gene87588	MS.gene24826	PPI
MS.gene055694	MS.gene24826	PPI
MS.gene24826	MS.gene87585	PPI
MS.gene71159	MS.gene24826	PPI
MS.gene24826	MS.gene023999	PPI
MS.gene96448	MS.gene24826	PPI
MS.gene77858	MS.gene24826	PPI
MS.gene041392	MS.gene24826	PPI
MS.gene58317	MS.gene24826	PPI
MS.gene069075	MS.gene24826	PPI
MS.gene033081	MS.gene24826	PPI
MS.gene24826	MS.gene036581	PPI
MS.gene24826	MS.gene035237	PPI
MS.gene031591	MS.gene24826	PPI
MS.gene24826	MS.gene000036	PPI
MS.gene035262	MS.gene24826	PPI
MS.gene24826	MS.gene50320	PPI
MS.gene24826	MS.gene58314	PPI
MS.gene51199	MS.gene24826	PPI
MS.gene24826	MS.gene87557	PPI
MS.gene58321	MS.gene24826	PPI
MS.gene064108	MS.gene24826	PPI
MS.gene24826	MS.gene035263	PPI
MS.gene062698	MS.gene24826	PPI
MS.gene57536	MS.gene24826	PPI
MS.gene96126	MS.gene24826	PPI
MS.gene019503	MS.gene24826	PPI
MS.gene24826	MS.gene053257	PPI
MS.gene016524	MS.gene24826	PPI
MS.gene87559	MS.gene24826	PPI
MS.gene50304	MS.gene24826	PPI
MS.gene24826	MS.gene51201	PPI
MS.gene041473	MS.gene24826	PPI
MS.gene24826	MS.gene50336	PPI
MS.gene59943	MS.gene24826	PPI
MS.gene24826	MS.gene77704	PPI
MS.gene31587	MS.gene24826	PPI
MS.gene041393	MS.gene24826	PPI
MS.gene033441	MS.gene24826	PPI
MS.gene24826	MS.gene047279	PPI
MS.gene24826	MS.gene50305	PPI
MS.gene063826	MS.gene24826	PPI
MS.gene24826	MS.gene032969	PPI
MS.gene060367	MS.gene24826	PPI
MS.gene24826	MS.gene68890	PPI
MS.gene44892	MS.gene24826	PPI
MS.gene24826	MS.gene42445	PPI
MS.gene036664	MS.gene24826	PPI
MS.gene24826	MS.gene86273	PPI
MS.gene24826	MS.gene036663	PPI
MS.gene58239	MS.gene24826	PPI
MS.gene066641	MS.gene24826	PPI
MS.gene24826	MS.gene26830	PPI
MS.gene000038	MS.gene24826	PPI
MS.gene57531	MS.gene24826	PPI
MS.gene064111	MS.gene24826	PPI
MS.gene67501	MS.gene24826	PPI
MS.gene24826	MS.gene63657	PPI
MS.gene24826	MS.gene023996	PPI
MS.gene39262	MS.gene24826	PPI
MS.gene58241	MS.gene24826	PPI
MS.gene053256	MS.gene24826	PPI
MS.gene025887	MS.gene24826	PPI
MS.gene24826	MS.gene045473	PPI
MS.gene019507	MS.gene24826	PPI
MS.gene045474	MS.gene24826	PPI
MS.gene24826	MS.gene50301	PPI
MS.gene75875	MS.gene24826	PPI
MS.gene041470	MS.gene24826	PPI
MS.gene058694	MS.gene24826	PPI
MS.gene064090	MS.gene24826	PPI
MS.gene24826	MS.gene031590	PPI
MS.gene058701	MS.gene24826	PPI
MS.gene015089	MS.gene24826	PPI
MS.gene006710	MS.gene24826	PPI
MS.gene24826	MS.gene064086	PPI
MS.gene90743	MS.gene24826	PPI
MS.gene011679	MS.gene24826	PPI
MS.gene033079	MS.gene24826	PPI
MS.gene24826	MS.gene90742	PPI
MS.gene64001	MS.gene24826	PPI
MS.gene24826	MS.gene50332	PPI
MS.gene57533	MS.gene24826	PPI
MS.gene24826	MS.gene024979	PPI
MS.gene36704	MS.gene24826	PPI
MS.gene032970	MS.gene24826	PPI
MS.gene77856	MS.gene24826	PPI
MS.gene24826	MS.gene063472	PPI
MS.gene24826	MS.gene43790	PPI
MS.gene036556	MS.gene24826	PPI
MS.gene68890	MS.gene24826	PPI
MS.gene40887	MS.gene24826	PPI
MS.gene034688	MS.gene24826	PPI
MS.gene51188	MS.gene24826	PPI
MS.gene63655	MS.gene24826	PPI
MS.gene44883	MS.gene24826	PPI
MS.gene48221	MS.gene24826	PPI
MS.gene24826	MS.gene88416	PPI
MS.gene41046	MS.gene24826	PPI
MS.gene063472	MS.gene24826	PPI
MS.gene017412	MS.gene24826	PPI
MS.gene57529	MS.gene24826	PPI
MS.gene24826	MS.gene003076	PPI
MS.gene80884	MS.gene24826	PPI
MS.gene24826	MS.gene024009	PPI
MS.gene24826	MS.gene036599	PPI
MS.gene51192	MS.gene24826	PPI
MS.gene009883	MS.gene24826	PPI
MS.gene041395	MS.gene24826	PPI
MS.gene40886	MS.gene24826	PPI
MS.gene044563	MS.gene24826	PPI
MS.gene24826	MS.gene006705	PPI
MS.gene033427	MS.gene24826	PPI
MS.gene24826	MS.gene061241	PPI
MS.gene27051	MS.gene24826	PPI
MS.gene40985	MS.gene24826	PPI
MS.gene060368	MS.gene24826	PPI
MS.gene041474	MS.gene24826	PPI
MS.gene77704	MS.gene24826	PPI
MS.gene27020	MS.gene24826	PPI
MS.gene066620	MS.gene24826	PPI
MS.gene035236	MS.gene24826	PPI
MS.gene24826	MS.gene38220	PPI
MS.gene24826	MS.gene40986	PPI
MS.gene86273	MS.gene24826	PPI
MS.gene041388	MS.gene24826	PPI
MS.gene24826	MS.gene041394	PPI
MS.gene059157	MS.gene24826	PPI
MS.gene24826	MS.gene03060	PPI
MS.gene51208	MS.gene24826	PPI
MS.gene24826	MS.gene036664	PPI
MS.gene24826	MS.gene024011	PPI
MS.gene24826	MS.gene58241	PPI
MS.gene24826	MS.gene064109	PPI
MS.gene24826	MS.gene058696	PPI
MS.gene24826	MS.gene009893	PPI
MS.gene045475	MS.gene24826	PPI
MS.gene88776	MS.gene24826	PPI
MS.gene35068	MS.gene24826	PPI
MS.gene90744	MS.gene24826	PPI
MS.gene51204	MS.gene24826	PPI
MS.gene58783	MS.gene24826	PPI
MS.gene058693	MS.gene24826	PPI
MS.gene036557	MS.gene24826	PPI
MS.gene50329	MS.gene24826	PPI
MS.gene070462	MS.gene24826	PPI
MS.gene31637	MS.gene24826	PPI
MS.gene57537	MS.gene24826	PPI
MS.gene059156	MS.gene24826	PPI
MS.gene84698	MS.gene24826	PPI
MS.gene009891	MS.gene24826	PPI
MS.gene82082	MS.gene24826	PPI
MS.gene24826	MS.gene041391	PPI
MS.gene50306	MS.gene24826	PPI
MS.gene24826	MS.gene57525	PPI
MS.gene90742	MS.gene24826	PPI
MS.gene24826	MS.gene030114	PPI
MS.gene57535	MS.gene24826	PPI
MS.gene24826	MS.gene045474	PPI
MS.gene24826	MS.gene036558	PPI
MS.gene87200	MS.gene24826	PPI
MS.gene24826	MS.gene87554	PPI
MS.gene033432	MS.gene24826	PPI
MS.gene24826	MS.gene40984	PPI
MS.gene24826	MS.gene064108	PPI
MS.gene24826	MS.gene048193	PPI
MS.gene24826	MS.gene016220	PPI
MS.gene59639	MS.gene24826	PPI
MS.gene44885	MS.gene24826	PPI
MS.gene060370	MS.gene24826	PPI
MS.gene50327	MS.gene24826	PPI
MS.gene066635	MS.gene24826	PPI
MS.gene010758	MS.gene24826	PPI
MS.gene87586	MS.gene24826	PPI
MS.gene24826	MS.gene58240	PPI
MS.gene57530	MS.gene24826	PPI
MS.gene24826	MS.gene27284	PPI
MS.gene50326	MS.gene24826	PPI
MS.gene24826	MS.gene034680	PPI
MS.gene42451	MS.gene24826	PPI
MS.gene51200	MS.gene24826	PPI
MS.gene50339	MS.gene24826	PPI
MS.gene24826	MS.gene48221	PPI
MS.gene046958	MS.gene24826	PPI
MS.gene060366	MS.gene24826	PPI
MS.gene87564	MS.gene24826	PPI
MS.gene88774	MS.gene24826	PPI
MS.gene24826	MS.gene063474	PPI
MS.gene24826	MS.gene51190	PPI
MS.gene24826	MS.gene58319	PPI
MS.gene24826	MS.gene044426	PPI
MS.gene24826	MS.gene034681	PPI
MS.gene42452	MS.gene24826	PPI
MS.gene063414	MS.gene24826	PPI
MS.gene24826	MS.gene57532	PPI
MS.gene24826	MS.gene033442	PPI
MS.gene009892	MS.gene24826	PPI
MS.gene24826	MS.gene009892	PPI
MS.gene40902	MS.gene24826	PPI
MS.gene57526	MS.gene24826	PPI
MS.gene24826	MS.gene44428	PPI
MS.gene24826	MS.gene058669	PPI
MS.gene24826	MS.gene066120	PPI
MS.gene021553	MS.gene24826	PPI
MS.gene26957	MS.gene24826	PPI
MS.gene033875	MS.gene24826	PPI
MS.gene97996	MS.gene24826	PPI
MS.gene036582	MS.gene24826	PPI
MS.gene27021	MS.gene24826	PPI
MS.gene035235	MS.gene24826	PPI
MS.gene58320	MS.gene24826	PPI
MS.gene24826	MS.gene041489	PPI
MS.gene26101	MS.gene24826	PPI
MS.gene066120	MS.gene24826	PPI
MS.gene24826	MS.gene024000	PPI
MS.gene041394	MS.gene24826	PPI
MS.gene58781	MS.gene24826	PPI
MS.gene57717	MS.gene24826	PPI
MS.gene028390	MS.gene24826	PPI
MS.gene011106	MS.gene24826	PPI
MS.gene033440	MS.gene24826	PPI
MS.gene62398	MS.gene24826	PPI
MS.gene60027	MS.gene24826	PPI
MS.gene24826	MS.gene034677	PPI
MS.gene44886	MS.gene24826	PPI
MS.gene066623	MS.gene24826	PPI
MS.gene038756	MS.gene24826	PPI
MS.gene24826	MS.gene035238	PPI
MS.gene40904	MS.gene24826	PPI
MS.gene24826	MS.gene064114	PPI
MS.gene041390	MS.gene24826	PPI
MS.gene24286	MS.gene24826	PPI
MS.gene92376	MS.gene24826	PPI
MS.gene24826	MS.gene87584	PPI
MS.gene000035	MS.gene24826	PPI
MS.gene87569	MS.gene24826	PPI
MS.gene24826	MS.gene58315	PPI
MS.gene87573	MS.gene24826	PPI
MS.gene24826	MS.gene80610	PPI
MS.gene041491	MS.gene24826	PPI
MS.gene019504	MS.gene24826	PPI
MS.gene034762	MS.gene24826	PPI
MS.gene51207	MS.gene24826	PPI
MS.gene059096	MS.gene24826	PPI
MS.gene50297	MS.gene24826	PPI
MS.gene006711	MS.gene24826	PPI
MS.gene27285	MS.gene24826	PPI
MS.gene58716	MS.gene24826	PPI
MS.gene68580	MS.gene24826	PPI
MS.gene033444	MS.gene24826	PPI
MS.gene019505	MS.gene24826	PPI
MS.gene58785	MS.gene24826	PPI
MS.gene24826	MS.gene27319	PPI
MS.gene034690	MS.gene24826	PPI
MS.gene066639	MS.gene24826	PPI
MS.gene26949	MS.gene24826	PPI
MS.gene51189	MS.gene24826	PPI
MS.gene96407	MS.gene24826	PPI
MS.gene50309	MS.gene24826	PPI
MS.gene036760	MS.gene24826	PPI
MS.gene77857	MS.gene24826	PPI
MS.gene58311	MS.gene24826	PPI
MS.gene24826	MS.gene064083	PPI
MS.gene57527	MS.gene24826	PPI
MS.gene24826	MS.gene58783	PPI
MS.gene033426	MS.gene24826	PPI
MS.gene24826	MS.gene024420	PPI
MS.gene064086	MS.gene24826	PPI
MS.gene24826	MS.gene024008	PPI
MS.gene50298	MS.gene24826	PPI
MS.gene031590	MS.gene24826	PPI
MS.gene24826	MS.gene54541	PPI
MS.gene036584	MS.gene24826	PPI
MS.gene67687	MS.gene24826	PPI
MS.gene24826	MS.gene036584	PPI
MS.gene035261	MS.gene24826	PPI
MS.gene24826	MS.gene053299	PPI
MS.gene24826	MS.gene28758	PPI
MS.gene24826	MS.gene42451	PPI
MS.gene063670	MS.gene24826	PPI
MS.gene066626	MS.gene24826	PPI
MS.gene019506	MS.gene24826	PPI
MS.gene058692	MS.gene24826	PPI
MS.gene24826	MS.gene69307	PPI
MS.gene033083	MS.gene24826	PPI
MS.gene69309	MS.gene24826	PPI
MS.gene63658	MS.gene24826	PPI
MS.gene024002	MS.gene24826	PPI
MS.gene034686	MS.gene24826	PPI
MS.gene40982	MS.gene24826	PPI
MS.gene070461	MS.gene24826	PPI
MS.gene58315	MS.gene24826	PPI
MS.gene24826	MS.gene67501	PPI
MS.gene24826	MS.gene96406	PPI
MS.gene036662	MS.gene24826	PPI
MS.gene87563	MS.gene24826	PPI
MS.gene033431	MS.gene24826	PPI
MS.gene24826	MS.gene40878	PPI
MS.gene24212	MS.gene24826	PPI
MS.gene051820	MS.gene24826	PPI
MS.gene041475	MS.gene24826	PPI
MS.gene40988	MS.gene24826	PPI
MS.gene24826	MS.gene058703	PPI
MS.gene81242	MS.gene24826	PPI
MS.gene27283	MS.gene24826	PPI
MS.gene64203	MS.gene24826	PPI
MS.gene045140	MS.gene24826	PPI
MS.gene24826	MS.gene012215	PPI
MS.gene024004	MS.gene24826	PPI
MS.gene42444	MS.gene24826	PPI
MS.gene51202	MS.gene24826	PPI
MS.gene059101	MS.gene24826	PPI
MS.gene87562	MS.gene24826	PPI
MS.gene24826	MS.gene22715	PPI
MS.gene24826	MS.gene58316	PPI
MS.gene24826	MS.gene51207	PPI
MS.gene24826	MS.gene87564	PPI
MS.gene26829	MS.gene24826	PPI
MS.gene24826	MS.gene36595	PPI
MS.gene064104	MS.gene24826	PPI
MS.gene40878	MS.gene24826	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24826.t1	MTR_1g037540	40.950	337	136	14	1	278	1	333	2.19e-64	208
MS.gene24826.t1	MTR_1g008000	46.215	251	96	6	62	301	4	226	7.17e-63	200
MS.gene24826.t1	MTR_1g023400	38.111	307	139	14	4	276	2	291	1.91e-45	157
MS.gene24826.t1	MTR_1g009110	34.848	330	174	13	2	297	11	333	1.97e-42	150
MS.gene24826.t1	MTR_4g080200	35.082	305	150	13	5	280	3	288	1.10e-40	145
MS.gene24826.t1	MTR_1g022200	38.562	306	141	15	4	276	14	305	3.79e-40	144
MS.gene24826.t1	MTR_1g022105	32.673	303	127	10	4	276	20	275	4.34e-27	108
MS.gene24826.t1	MTR_7g013590	29.461	241	150	8	8	233	39	274	3.64e-19	87.4
MS.gene24826.t1	MTR_8g073550	29.474	190	113	6	8	187	33	211	8.63e-18	81.3
MS.gene24826.t1	MTR_8g093280	42.424	99	49	1	9	107	11	101	5.59e-17	75.9
MS.gene24826.t1	MTR_3g034130	27.687	307	185	13	8	288	12	307	7.37e-17	80.5
MS.gene24826.t1	MTR_3g030250	25.177	282	169	8	8	269	40	299	1.34e-16	79.7
MS.gene24826.t1	MTR_7g016930	26.471	272	165	8	8	254	19	280	2.46e-16	78.6
MS.gene24826.t1	MTR_6g048120	24.662	296	175	11	8	273	39	316	3.26e-16	79.0
MS.gene24826.t1	MTR_6g004660	24.104	307	182	11	9	276	20	314	6.39e-16	77.8
MS.gene24826.t1	MTR_4g130330	25.926	297	161	13	8	254	10	297	8.56e-16	77.4
MS.gene24826.t1	MTR_3g007360	26.006	323	194	16	8	297	55	365	8.99e-16	77.4
MS.gene24826.t1	MTR_4g028660	24.028	283	174	11	13	254	24	306	1.08e-15	77.4
MS.gene24826.t1	MTR_4g027450	24.028	283	174	11	13	254	24	306	1.08e-15	77.4
MS.gene24826.t1	MTR_3g034180	27.796	313	186	14	8	291	126	427	1.22e-15	77.4
MS.gene24826.t1	MTR_6g021880	24.731	279	181	8	16	269	31	305	1.36e-15	77.0
MS.gene24826.t1	MTR_3g014540	29.878	164	97	6	7	162	31	184	2.17e-15	76.3
MS.gene24826.t1	MTR_3g007410	26.349	315	188	15	8	289	55	358	2.50e-15	76.3
MS.gene24826.t1	MTR_2g021155	30.366	191	115	6	8	190	39	219	2.84e-15	76.6
MS.gene24826.t1	MTR_6g027910	30.047	213	106	11	8	190	12	211	2.87e-15	75.9
MS.gene24826.t1	MTR_6g065980	23.734	316	177	14	8	289	19	304	3.26e-15	75.5
MS.gene24826.t1	MTR_3g006570	25.938	320	177	14	8	288	24	322	3.96e-15	75.5
MS.gene24826.t1	MTR_0044s0300	23.313	326	212	13	8	307	41	354	4.89e-15	75.5
MS.gene24826.t1	MTR_4g006840	28.750	160	103	3	8	165	2	152	4.99e-15	73.6
MS.gene24826.t1	MTR_3g014570	30.573	157	97	5	7	158	31	180	5.47e-15	75.1
MS.gene24826.t1	MTR_7g407070	26.452	310	180	13	8	276	35	337	5.89e-15	75.1
MS.gene24826.t1	MTR_2g029990	29.545	176	99	5	8	173	54	214	6.70e-15	75.1
MS.gene24826.t1	MTR_3g013770	29.560	159	99	4	8	158	36	189	7.88e-15	74.7
MS.gene24826.t1	MTR_3g010430	27.778	198	114	6	8	190	39	222	8.19e-15	74.7
MS.gene24826.t1	MTR_3g013740	28.090	178	111	5	1	165	40	213	1.75e-14	73.9
MS.gene24826.t1	MTR_1g053510	25.552	317	177	14	8	269	18	330	2.73e-14	73.2
MS.gene24826.t1	MTR_1g007450	27.407	270	154	14	4	235	11	276	3.25e-14	73.2
MS.gene24826.t1	MTR_5g097220	28.723	188	97	7	1	161	9	186	4.77e-14	72.4
MS.gene24826.t1	MTR_7g070440	30.189	159	100	4	8	160	10	163	4.86e-14	72.4
MS.gene24826.t1	MTR_2g426070	23.113	212	142	5	8	200	9	218	5.29e-14	72.4
MS.gene24826.t1	MTR_4g028680	24.232	293	172	12	8	254	19	307	6.08e-14	72.0
MS.gene24826.t1	MTR_1g056710	30.588	170	98	9	8	169	37	194	6.15e-14	72.0
MS.gene24826.t1	MTR_3g006530	25.703	249	153	8	8	233	43	282	6.57e-14	72.0
MS.gene24826.t1	MTR_4g107820	24.870	193	129	8	8	192	39	223	8.11e-14	71.6
MS.gene24826.t1	MTR_4g107780	24.870	193	129	8	8	192	39	223	8.11e-14	71.6
MS.gene24826.t1	MTR_3g058480	26.036	169	108	4	8	162	42	207	8.42e-14	71.2
MS.gene24826.t1	MTR_5g046300	22.456	285	179	10	8	269	7	272	8.53e-14	71.2
MS.gene24826.t1	MTR_5g046290	22.456	285	179	10	8	269	7	272	8.53e-14	71.2
MS.gene24826.t1	MTR_2g021150	27.692	195	118	7	8	190	17	200	9.22e-14	71.2
MS.gene24826.t1	MTR_4g107780	24.870	193	129	8	8	192	39	223	9.26e-14	71.6
MS.gene24826.t1	MTR_4g107820	24.870	193	129	8	8	192	39	223	9.79e-14	71.6
MS.gene24826.t1	MTR_3g036430	23.827	277	159	10	8	269	23	262	1.09e-13	70.9
MS.gene24826.t1	MTR_6g070880	27.011	174	107	5	8	161	35	208	1.45e-13	69.7
MS.gene24826.t1	MTR_6g071420	27.011	174	107	5	8	161	35	208	1.45e-13	69.7
MS.gene24826.t1	MTR_2g021252	28.662	157	107	3	8	162	50	203	1.55e-13	70.9
MS.gene24826.t1	MTR_2g046830	27.049	244	150	8	8	235	28	259	1.64e-13	70.9
MS.gene24826.t1	MTR_8g012090	31.579	171	93	6	8	159	19	184	2.05e-13	70.1
MS.gene24826.t1	MTR_3g058470	24.419	172	107	4	8	162	40	205	2.12e-13	70.5
MS.gene24826.t1	MTR_4g055060	30.000	160	107	3	8	162	33	192	2.37e-13	70.5
MS.gene24826.t1	MTR_6g048140	23.413	252	160	5	4	233	38	278	2.91e-13	70.1
MS.gene24826.t1	MTR_4g023440	26.115	157	103	4	12	163	25	173	4.39e-13	69.3
MS.gene24826.t1	MTR_5g011200	28.436	211	118	10	8	202	20	213	4.78e-13	69.3
MS.gene24826.t1	MTR_6g055210	28.750	160	106	4	8	160	25	183	4.84e-13	69.7
MS.gene24826.t1	MTR_4g028510	22.517	302	168	13	8	254	19	309	5.25e-13	69.3
MS.gene24826.t1	MTR_7g061050	30.508	177	85	8	7	160	15	176	5.25e-13	69.3
MS.gene24826.t1	MTR_6g017270	28.571	203	117	9	8	192	12	204	6.11e-13	68.9
MS.gene24826.t1	MTR_2g078850	29.143	175	89	6	8	164	33	190	6.25e-13	68.9
MS.gene24826.t1	MTR_1g097560	26.289	194	127	8	2	191	33	214	6.40e-13	68.9
MS.gene24826.t1	MTR_3g030350	25.984	254	135	11	8	233	38	266	7.42e-13	68.9
MS.gene24826.t1	MTR_2g021210	32.500	160	88	9	8	160	87	233	7.50e-13	68.9
MS.gene24826.t1	MTR_5g022420	22.727	286	162	11	13	273	35	286	8.13e-13	68.6
MS.gene24826.t1	MTR_6g089990	55.932	59	24	1	4	60	54	112	8.24e-13	67.0
MS.gene24826.t1	MTR_2g046920	27.459	244	150	9	8	235	27	259	9.78e-13	68.6
MS.gene24826.t1	MTR_7g017040	31.792	173	105	7	8	168	19	190	9.95e-13	68.6
MS.gene24826.t1	MTR_7g007300	28.994	169	95	7	8	162	106	263	1.02e-12	68.6
MS.gene24826.t1	MTR_1g054575	27.660	188	118	7	12	192	59	235	1.16e-12	68.6
MS.gene24826.t1	MTR_6g079770	24.865	185	99	5	8	161	20	195	1.32e-12	68.2
MS.gene24826.t1	MTR_7g017130	28.627	255	128	12	8	244	21	239	1.36e-12	68.2
MS.gene24826.t1	MTR_8g101940	25.907	193	125	5	8	192	5	187	1.41e-12	67.8
MS.gene24826.t1	MTR_7g017170	28.627	255	128	12	8	244	21	239	1.49e-12	68.2
MS.gene24826.t1	MTR_5g094350	27.647	170	97	6	8	160	16	176	1.50e-12	67.0
MS.gene24826.t1	MTR_3g009240	24.540	326	210	16	8	307	39	354	1.63e-12	67.8
MS.gene24826.t1	MTR_4g024870	28.302	212	127	8	8	205	47	247	1.66e-12	67.8
MS.gene24826.t1	MTR_1g055055	33.824	136	72	6	8	131	29	158	1.96e-12	67.4
MS.gene24826.t1	MTR_6g053260	28.218	202	110	8	8	190	340	525	2.14e-12	67.8
MS.gene24826.t1	MTR_3g096250	30.435	184	106	9	8	180	50	222	2.27e-12	67.0
MS.gene24826.t1	MTR_4g030110	28.161	174	90	6	7	160	32	190	2.27e-12	67.4
MS.gene24826.t1	MTR_7g078860	27.419	186	112	7	2	169	6	186	2.31e-12	67.4
MS.gene24826.t1	MTR_5g057643	28.571	161	106	4	8	162	49	206	2.32e-12	66.2
MS.gene24826.t1	MTR_4g021785	25.589	297	181	12	8	286	12	286	2.32e-12	67.0
MS.gene24826.t1	MTR_3g058440	24.686	239	145	9	8	222	38	265	2.65e-12	66.6
MS.gene24826.t1	MTR_3g103020	24.671	304	185	12	8	286	23	307	2.69e-12	67.0
MS.gene24826.t1	MTR_2g066150	26.344	186	131	4	8	189	15	198	2.82e-12	67.0
MS.gene24826.t1	MTR_1g097490	26.131	199	129	4	1	191	45	233	2.89e-12	67.0
MS.gene24826.t1	MTR_5g057710	28.221	163	104	4	8	162	49	206	3.00e-12	67.0
MS.gene24826.t1	MTR_0115s0020	25.837	209	127	7	8	196	13	213	3.13e-12	67.0
MS.gene24826.t1	MTR_6g007135	25.220	341	186	16	8	302	29	346	3.19e-12	67.0
MS.gene24826.t1	MTR_1g055375	29.480	173	97	6	8	165	7	169	3.44e-12	66.6
MS.gene24826.t1	MTR_5g057790	28.571	161	106	4	8	162	49	206	3.73e-12	66.6
MS.gene24826.t1	MTR_5g068040	26.768	198	103	8	8	192	19	187	3.74e-12	66.6
MS.gene24826.t1	MTR_4g013185	27.803	223	120	9	5	196	10	222	4.11e-12	66.6
MS.gene24826.t1	MTR_8g062660	24.601	313	197	12	8	288	25	330	4.25e-12	67.0
MS.gene24826.t1	MTR_4g061340	27.670	206	115	9	8	191	29	222	4.35e-12	66.6
MS.gene24826.t1	MTR_7g035295	29.500	200	115	8	7	187	18	210	4.43e-12	66.6
MS.gene24826.t1	MTR_3g034160	26.384	307	189	13	8	288	12	307	4.81e-12	66.2
MS.gene24826.t1	MTR_8g033140	29.379	177	97	6	8	163	22	191	4.85e-12	66.6
MS.gene24826.t1	MTR_3g009310	25.000	300	176	14	8	276	45	326	5.75e-12	66.2
MS.gene24826.t1	MTR_2g021770	23.767	223	136	8	1	203	8	216	6.82e-12	65.9
MS.gene24826.t1	MTR_4g129190	30.769	130	74	5	8	126	9	133	6.88e-12	65.9
MS.gene24826.t1	MTR_2g021190	24.917	301	160	14	8	269	24	297	7.03e-12	65.9
MS.gene24826.t1	MTR_3g436150	24.390	328	189	16	8	289	35	349	8.84e-12	65.5
MS.gene24826.t1	MTR_3g030330	24.150	294	160	12	8	269	23	285	9.27e-12	65.5
MS.gene24826.t1	MTR_3g464470	25.381	197	127	6	7	196	9	192	9.38e-12	65.5
MS.gene24826.t1	MTR_1g055135	28.025	157	106	3	8	163	16	166	9.63e-12	65.5
MS.gene24826.t1	MTR_1g088120	29.885	174	96	5	5	160	10	175	9.95e-12	65.5
MS.gene24826.t1	MTR_3g011120	29.310	174	106	5	2	161	11	181	1.01e-11	65.5
MS.gene24826.t1	MTR_5g096710	28.824	170	101	5	8	163	26	189	1.10e-11	65.5
MS.gene24826.t1	MTR_1g054725	23.292	322	216	10	8	303	23	339	1.19e-11	65.1
MS.gene24826.t1	MTR_2g047832	27.660	188	124	5	8	191	32	211	1.23e-11	65.1
MS.gene24826.t1	MTR_1g094210	24.895	237	155	7	8	233	60	284	1.25e-11	65.1
MS.gene24826.t1	MTR_8g046310	26.962	293	173	14	8	269	19	301	1.29e-11	65.1
MS.gene24826.t1	MTR_5g097650	26.984	126	86	3	8	130	25	147	1.43e-11	62.0
MS.gene24826.t1	MTR_1g094210	24.895	237	155	7	8	233	60	284	1.58e-11	65.1
MS.gene24826.t1	MTR_4g023190	25.694	288	181	10	18	290	23	292	1.61e-11	64.7
MS.gene24826.t1	MTR_7g052150	27.811	169	102	7	8	162	25	187	1.65e-11	64.7
MS.gene24826.t1	MTR_4g031770	26.459	257	136	11	8	233	7	241	1.69e-11	64.7
MS.gene24826.t1	MTR_4g117780	27.604	192	124	5	8	196	14	193	1.74e-11	64.7
MS.gene24826.t1	MTR_2g034700	27.778	198	121	6	8	187	17	210	1.81e-11	64.7
MS.gene24826.t1	MTR_3g024150	27.545	167	103	6	8	163	38	197	1.94e-11	64.7
MS.gene24826.t1	MTR_3g036335	24.585	301	177	15	8	276	44	326	1.95e-11	64.7
MS.gene24826.t1	MTR_4g013180	30.827	133	74	4	5	126	11	136	2.31e-11	64.7
MS.gene24826.t1	MTR_3g009250	27.807	187	121	7	8	191	44	219	2.33e-11	63.2
MS.gene24826.t1	MTR_2g047200	28.571	168	101	6	8	160	23	186	2.36e-11	64.3
MS.gene24826.t1	MTR_8g464770	29.940	167	103	5	8	161	15	180	2.37e-11	64.3
MS.gene24826.t1	MTR_0760s0010	23.220	323	196	9	11	305	53	351	2.55e-11	64.3
MS.gene24826.t1	MTR_4g023150	26.298	289	179	11	18	290	23	293	2.92e-11	63.9
MS.gene24826.t1	MTR_6g053240	24.409	254	151	9	8	233	31	271	3.02e-11	63.9
MS.gene24826.t1	MTR_2g065860	26.012	173	109	5	8	161	15	187	3.24e-11	63.9
MS.gene24826.t1	MTR_7g056290	30.055	183	89	11	8	161	25	197	3.35e-11	63.9
MS.gene24826.t1	MTR_0620s0010	58.696	46	19	0	4	49	5	50	3.50e-11	58.5
MS.gene24826.t1	MTR_5g010660	28.750	160	106	3	9	160	38	197	3.51e-11	63.9
MS.gene24826.t1	MTR_6g090010	57.692	52	21	1	4	54	54	105	3.58e-11	61.2
MS.gene24826.t1	MTR_0097s0030	25.743	202	123	5	2	180	11	208	3.58e-11	63.9
MS.gene24826.t1	MTR_2g047240	25.743	202	123	5	2	180	11	208	3.58e-11	63.9
MS.gene24826.t1	MTR_3g036290	28.395	162	100	5	8	162	25	177	3.59e-11	63.5
MS.gene24826.t1	MTR_5g075370	29.670	182	86	7	8	160	11	179	3.79e-11	64.3
MS.gene24826.t1	MTR_3g009260	23.988	321	205	14	8	303	44	350	4.32e-11	63.5
MS.gene24826.t1	MTR_3g007330	27.950	161	96	6	8	160	51	199	4.33e-11	63.5
MS.gene24826.t1	MTR_8g033110	24.478	335	168	14	8	269	17	339	4.35e-11	63.5
MS.gene24826.t1	MTR_7g066850	26.961	204	128	8	8	205	26	214	4.46e-11	63.5
MS.gene24826.t1	MTR_0054s0090	25.789	190	106	8	8	174	20	197	4.72e-11	63.5
MS.gene24826.t1	MTR_3g464500	24.153	236	144	7	7	219	29	252	4.72e-11	63.5
MS.gene24826.t1	MTR_4g117770	26.667	195	122	5	8	196	14	193	4.92e-11	63.2
MS.gene24826.t1	MTR_4g117810	26.667	195	122	5	8	196	14	193	4.92e-11	63.2
MS.gene24826.t1	MTR_5g057040	27.429	175	90	6	8	162	49	206	4.93e-11	63.9
MS.gene24826.t1	MTR_4g030090	27.473	182	113	7	1	170	10	184	5.00e-11	63.5
MS.gene24826.t1	MTR_4g023070	26.623	308	173	15	8	286	6	289	5.02e-11	63.2
MS.gene24826.t1	MTR_5g069760	29.944	177	97	8	1	160	1	167	5.32e-11	63.2
MS.gene24826.t1	MTR_2g066200	27.374	179	113	6	8	171	15	191	5.41e-11	63.2
MS.gene24826.t1	MTR_7g061060	28.571	175	94	6	7	160	15	179	5.57e-11	63.2
MS.gene24826.t1	MTR_4g030830	28.293	205	121	9	7	196	11	204	5.60e-11	63.2
MS.gene24826.t1	MTR_2g046900	25.296	253	152	8	8	235	31	271	5.84e-11	63.2
MS.gene24826.t1	MTR_3g010590	26.042	192	116	5	8	190	42	216	5.88e-11	63.2
MS.gene24826.t1	MTR_7g067680	35.075	134	73	5	8	130	52	182	6.10e-11	63.2
MS.gene24826.t1	MTR_3g007430	23.926	326	199	15	8	302	46	353	6.15e-11	63.2
MS.gene24826.t1	MTR_8g013010	30.000	160	105	5	8	163	57	213	6.38e-11	62.8
MS.gene24826.t1	MTR_8g039500	28.931	159	107	5	8	161	15	172	6.64e-11	62.8
MS.gene24826.t1	MTR_3g011650	27.835	194	113	9	8	191	82	258	6.74e-11	62.4
MS.gene24826.t1	MTR_7g104710	28.025	157	88	5	8	146	20	169	6.90e-11	62.4
MS.gene24826.t1	MTR_2g031640	25.389	193	119	9	8	191	9	185	6.92e-11	62.8
MS.gene24826.t1	MTR_0054s0100	24.870	193	110	8	6	174	18	199	7.15e-11	62.8
MS.gene24826.t1	MTR_0129s0050	28.402	169	101	7	8	161	17	180	7.49e-11	62.8
MS.gene24826.t1	MTR_1g007430	28.571	175	112	8	16	179	7	179	7.74e-11	62.4
MS.gene24826.t1	MTR_3g006670	27.326	172	105	5	8	169	52	213	7.89e-11	62.8
MS.gene24826.t1	MTR_5g072060	30.909	165	102	6	8	161	9	172	9.31e-11	62.8
MS.gene24826.t1	MTR_7g055930	27.128	188	98	5	8	160	16	199	9.66e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene24826.t1	AT3G17530	26.950	282	175	13	8	267	9	281	6.50e-16	77.8
MS.gene24826.t1	AT3G23880	26.596	282	172	11	12	273	21	287	2.69e-15	75.9
MS.gene24826.t1	AT4G19940	23.973	292	173	11	8	264	38	315	1.59e-13	70.9
MS.gene24826.t1	AT3G17570	26.014	296	159	12	8	268	8	278	1.79e-12	67.8
MS.gene24826.t1	AT2G40925	24.503	302	193	13	8	284	30	321	4.29e-12	66.6
MS.gene24826.t1	AT3G16210	26.042	192	113	7	1	187	1	168	4.46e-12	66.2
MS.gene24826.t1	AT1G12870	23.810	252	167	7	2	233	30	276	5.58e-12	66.2
MS.gene24826.t1	AT3G17540	22.759	290	175	12	8	267	13	283	1.30e-11	65.1
MS.gene24826.t1	AT3G17280	25.000	252	144	11	8	236	10	239	7.00e-11	62.8
MS.gene24826.t1	AT3G17280	25.000	252	144	11	8	236	10	239	7.00e-11	62.8

Find 75 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAGAGCTTTGGAGGAGATT+TGG	0.257516	8.4:+9447550	MS.gene24826:CDS
TGTTAAAATTGTGGTCATTA+TGG	0.266117	8.4:-9448229	None:intergenic
TCACTTCTACCAGTGTGATA+TGG	0.272065	8.4:-9448145	None:intergenic
TCTTCTTCTTGTACCATAGA+TGG	0.276807	8.4:-9447722	None:intergenic
TTGGAAAAGATGTTTCTTAT+TGG	0.284073	8.4:-9447794	None:intergenic
GCTGAAGAATTGATTGGTTT+TGG	0.299406	8.4:+9447968	MS.gene24826:CDS
AGTCTTTACGATGATCTTCT+TGG	0.306673	8.4:-9447868	None:intergenic
TTTCTTATTGGTGTTATTGT+TGG	0.315763	8.4:-9447782	None:intergenic
CCATGATGCCGAAAACAATA+TGG	0.324952	8.4:-9448305	None:intergenic
GGATACTAGGGCAAGGGATA+AGG	0.331740	8.4:-9448108	None:intergenic
TCTCGTGATCTTTCCATCTA+TGG	0.349068	8.4:+9447709	MS.gene24826:CDS
AACTATGTCAACAGAAGGTT+GGG	0.355631	8.4:-9447933	None:intergenic
AAATTGTGGTCATTATGGTT+AGG	0.362120	8.4:-9448224	None:intergenic
AAACGCATCAATGACTTTGC+TGG	0.369627	8.4:-9447596	None:intergenic
CCCTTAAGAATATGCTCCTT+TGG	0.371935	8.4:+9447821	MS.gene24826:CDS
GTAGTTGAAATTGATTGTTT+TGG	0.377229	8.4:-9448268	None:intergenic
ACCAAAGGAGCATATTCTTA+AGG	0.383093	8.4:-9447822	None:intergenic
CCAAAGGAGCATATTCTTAA+GGG	0.386039	8.4:-9447821	None:intergenic
TATTGTTGGGTTGTCTTGTA+AGG	0.389430	8.4:-9447768	None:intergenic
TTCTTATTGGTGTTATTGTT+GGG	0.399973	8.4:-9447781	None:intergenic
CACTTCTACCAGTGTGATAT+GGG	0.406903	8.4:-9448144	None:intergenic
AATTGTGGTCATTATGGTTA+GGG	0.411313	8.4:-9448223	None:intergenic
GATAGAATGAGTAAGAGCTT+TGG	0.422097	8.4:+9447539	None:intergenic
AAACAATCAATTTCAACTAC+TGG	0.426998	8.4:+9448271	MS.gene24826:CDS
GGTTAAGAATCAACAAGGTT+GGG	0.438242	8.4:+9448391	MS.gene24826:CDS
GTTGTACGTGTTCTTTCAAA+GGG	0.440187	8.4:+9448457	MS.gene24826:CDS
AGACTCCCTACTTCGTTAAG+AGG	0.441446	8.4:+9447654	MS.gene24826:CDS
TTTGACGAGTTTGAATTCAT+TGG	0.444244	8.4:-9448005	None:intergenic
ATAGTTTCTGAAGGGATACT+AGG	0.447983	8.4:-9448121	None:intergenic
AAGAATGATGTTCAAGTCCT+TGG	0.448277	8.4:+9448481	MS.gene24826:CDS
GATACTAGGGCAAGGGATAA+GGG	0.448796	8.4:-9448107	None:intergenic
CATGGTATCGCTGAGATTAA+CGG	0.458273	8.4:+9448323	MS.gene24826:CDS
AGAATGAGTAAGAGCTTTGG+AGG	0.465302	8.4:+9447542	None:intergenic
GGGTTAAGAATCAACAAGGT+TGG	0.473205	8.4:+9448390	MS.gene24826:CDS
CAACTATGTCAACAGAAGGT+TGG	0.479617	8.4:-9447934	None:intergenic
CATGTGCCTCTTAACGAAGT+AGG	0.483046	8.4:-9447660	None:intergenic
TGCCGAAAACAATATGGAAC+TGG	0.483604	8.4:-9448299	None:intergenic
TGTTGTACGTGTTCTTTCAA+AGG	0.488127	8.4:+9448456	MS.gene24826:CDS
TGCGTTTCAAATGTGTCAAA+CGG	0.496796	8.4:+9447612	MS.gene24826:CDS
CATGTACCTCCTTAGTGGTC+GGG	0.506953	8.4:-9447904	None:intergenic
AAGAACATGTACCTCCTTAG+TGG	0.507758	8.4:-9447909	None:intergenic
ATGATCATAACAATAAATCA+TGG	0.511615	8.4:+9448083	MS.gene24826:CDS
CTTGTAAGGAGAGAATCGTT+AGG	0.513160	8.4:-9447754	None:intergenic
ATGTGCCTCTTAACGAAGTA+GGG	0.531144	8.4:-9447659	None:intergenic
ATGCTCCTTTGGTCATTGCA+AGG	0.538029	8.4:+9447832	MS.gene24826:CDS
TTTGTGTCCACCTTCTTCCA+AGG	0.540661	8.4:-9448498	None:intergenic
TGCTCCTTTGGTCATTGCAA+GGG	0.544439	8.4:+9447833	MS.gene24826:CDS
ATGTTCAAGTCCTTGGAAGA+AGG	0.547835	8.4:+9448488	MS.gene24826:CDS
TAAAGCAATGTTTATGACGA+TGG	0.548120	8.4:-9448036	None:intergenic
TCAAATGTGTCAAACGGTCA+TGG	0.548447	8.4:+9447618	MS.gene24826:CDS
GAGTTTGAATTCATTGGTGT+TGG	0.551725	8.4:-9447999	None:intergenic
CAAAGGAGCATATTCTTAAG+GGG	0.556078	8.4:-9447820	None:intergenic
TTGTAAGGAGAGAATCGTTA+GGG	0.558622	8.4:-9447753	None:intergenic
AGGAGAGGATGTTAAAATTG+TGG	0.568698	8.4:-9448238	None:intergenic
ACATGTACCTCCTTAGTGGT+CGG	0.584242	8.4:-9447905	None:intergenic
TGATATGGGATAGTTTCTGA+AGG	0.587164	8.4:-9448130	None:intergenic
TAGTTTCTGAAGGGATACTA+GGG	0.588976	8.4:-9448120	None:intergenic
ACTTCAACTATGTCAACAGA+AGG	0.593607	8.4:-9447938	None:intergenic
AGTTCGACTAACATAAGCAA+GGG	0.598784	8.4:-9448348	None:intergenic
TTCAAGTCCTTGGAAGAAGG+TGG	0.611572	8.4:+9448491	MS.gene24826:CDS
CTGAAGGGATACTAGGGCAA+GGG	0.614619	8.4:-9448114	None:intergenic
TCTGAAGGGATACTAGGGCA+AGG	0.614794	8.4:-9448115	None:intergenic
CACTAACGTCAGAATCAAGT+GGG	0.627852	8.4:-9448435	None:intergenic
GAATTCAAACTCGTCAAAGT+CGG	0.632194	8.4:+9448010	MS.gene24826:CDS
ACACTAACGTCAGAATCAAG+TGG	0.638041	8.4:-9448436	None:intergenic
TTTGTGGAACCCGACCACTA+AGG	0.638887	8.4:+9447895	MS.gene24826:CDS
TACACCCTTGCAATGACCAA+AGG	0.639440	8.4:-9447837	None:intergenic
AAGTTCGACTAACATAAGCA+AGG	0.640680	8.4:-9448349	None:intergenic
ATTTGGGTTAAGAATCAACA+AGG	0.647518	8.4:+9448386	MS.gene24826:CDS
GTGGAACCCGACCACTAAGG+AGG	0.647749	8.4:+9447898	MS.gene24826:CDS
TGGAGACAGAGATATTAGCG+AGG	0.660001	8.4:+9447570	MS.gene24826:CDS
GATATGGGATAGTTTCTGAA+GGG	0.663277	8.4:-9448129	None:intergenic
GAAACTATCCCATATCACAC+TGG	0.686338	8.4:+9448136	MS.gene24826:CDS
ACTATGTCAACAGAAGGTTG+GGG	0.720534	8.4:-9447932	None:intergenic
TTGTACGTGTTCTTTCAAAG+GGG	0.744543	8.4:+9448458	MS.gene24826:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGATCATAACAATAAATCA+TGG	+	chr8.4:9448083-9448102	MS.gene24826:CDS	20.0%
!	AAACAATCAATTTCAACTAC+TGG	+	chr8.4:9448271-9448290	MS.gene24826:CDS	25.0%
!	TGTTAAAATTGTGGTCATTA+TGG	-	chr8.4:9448232-9448251	None:intergenic	25.0%
!	TTGGAAAAGATGTTTCTTAT+TGG	-	chr8.4:9447797-9447816	None:intergenic	25.0%
!	TTGTTAATGGTGTTTATCAT+TGG	+	chr8.4:9448192-9448211	MS.gene24826:intron	25.0%
!!	GTAGTTGAAATTGATTGTTT+TGG	-	chr8.4:9448271-9448290	None:intergenic	25.0%
!!!	TTATGTTAGTCGAACTTTTT+TGG	+	chr8.4:9448355-9448374	MS.gene24826:CDS	25.0%
!!!	TTCTTATTGGTGTTATTGTT+GGG	-	chr8.4:9447784-9447803	None:intergenic	25.0%
!!!	TTTCTTATTGGTGTTATTGT+TGG	-	chr8.4:9447785-9447804	None:intergenic	25.0%
	AAATTGTGGTCATTATGGTT+AGG	-	chr8.4:9448227-9448246	None:intergenic	30.0%
	AATTGTGGTCATTATGGTTA+GGG	-	chr8.4:9448226-9448245	None:intergenic	30.0%
	ATACTCTTGACTCTTGTTAA+TGG	+	chr8.4:9448179-9448198	MS.gene24826:intron	30.0%
	GAAAAAGCTGAAGAATTGAT+TGG	+	chr8.4:9447962-9447981	MS.gene24826:CDS	30.0%
	TAAAGCAATGTTTATGACGA+TGG	-	chr8.4:9448039-9448058	None:intergenic	30.0%
	TTTGACGAGTTTGAATTCAT+TGG	-	chr8.4:9448008-9448027	None:intergenic	30.0%
!	ATTTGGGTTAAGAATCAACA+AGG	+	chr8.4:9448386-9448405	MS.gene24826:CDS	30.0%
!!!	ATCGTAAAGACTTAGTTTTG+TGG	+	chr8.4:9447879-9447898	MS.gene24826:CDS	30.0%
!!!	TTGATTGTTTTGGAAGTCAA+AGG	-	chr8.4:9448261-9448280	None:intergenic	30.0%
	AACTATGTCAACAGAAGGTT+GGG	-	chr8.4:9447936-9447955	None:intergenic	35.0%
	AAGAATGATGTTCAAGTCCT+TGG	+	chr8.4:9448481-9448500	MS.gene24826:CDS	35.0%
	AAGTTCGACTAACATAAGCA+AGG	-	chr8.4:9448352-9448371	None:intergenic	35.0%
	ACTTCAACTATGTCAACAGA+AGG	-	chr8.4:9447941-9447960	None:intergenic	35.0%
	AGGAGAGGATGTTAAAATTG+TGG	-	chr8.4:9448241-9448260	None:intergenic	35.0%
	AGTCTTTACGATGATCTTCT+TGG	-	chr8.4:9447871-9447890	None:intergenic	35.0%
	AGTTCGACTAACATAAGCAA+GGG	-	chr8.4:9448351-9448370	None:intergenic	35.0%
	GAATTCAAACTCGTCAAAGT+CGG	+	chr8.4:9448010-9448029	MS.gene24826:CDS	35.0%
	GAGTTTGAATTCATTGGTGT+TGG	-	chr8.4:9448002-9448021	None:intergenic	35.0%
	GATATGGGATAGTTTCTGAA+GGG	-	chr8.4:9448132-9448151	None:intergenic	35.0%
	GGTTAAGAATCAACAAGGTT+GGG	+	chr8.4:9448391-9448410	MS.gene24826:CDS	35.0%
	GTTGTACGTGTTCTTTCAAA+GGG	+	chr8.4:9448457-9448476	MS.gene24826:CDS	35.0%
	TCTTCTTCTTGTACCATAGA+TGG	-	chr8.4:9447725-9447744	None:intergenic	35.0%
	TGATATGGGATAGTTTCTGA+AGG	-	chr8.4:9448133-9448152	None:intergenic	35.0%
	TGCGTTTCAAATGTGTCAAA+CGG	+	chr8.4:9447612-9447631	MS.gene24826:CDS	35.0%
	TGTTGTACGTGTTCTTTCAA+AGG	+	chr8.4:9448456-9448475	MS.gene24826:CDS	35.0%
	TTGTAAGGAGAGAATCGTTA+GGG	-	chr8.4:9447756-9447775	None:intergenic	35.0%
	TTGTACGTGTTCTTTCAAAG+GGG	+	chr8.4:9448458-9448477	MS.gene24826:CDS	35.0%
!	ACCAAAGGAGCATATTCTTA+AGG	-	chr8.4:9447825-9447844	None:intergenic	35.0%
!	ATAGTTTCTGAAGGGATACT+AGG	-	chr8.4:9448124-9448143	None:intergenic	35.0%
!	CAAAGGAGCATATTCTTAAG+GGG	-	chr8.4:9447823-9447842	None:intergenic	35.0%
!	CCAAAGGAGCATATTCTTAA+GGG	-	chr8.4:9447824-9447843	None:intergenic	35.0%
!	CTCCAGTTCCATATTGTTTT+CGG	+	chr8.4:9448297-9448316	MS.gene24826:CDS	35.0%
!	GCATATTCTTAAGGGGTTTT+TGG	-	chr8.4:9447816-9447835	None:intergenic	35.0%
!	TAGTTTCTGAAGGGATACTA+GGG	-	chr8.4:9448123-9448142	None:intergenic	35.0%
!	TATTGTTGGGTTGTCTTGTA+AGG	-	chr8.4:9447771-9447790	None:intergenic	35.0%
!!	GGTGTTTATCATTGGCTTAT+AGG	+	chr8.4:9448200-9448219	MS.gene24826:intron	35.0%
!!!	GCTGAAGAATTGATTGGTTT+TGG	+	chr8.4:9447968-9447987	MS.gene24826:CDS	35.0%
!!!	TTTTTTGGCGATGAGGATTT+GGG	+	chr8.4:9448370-9448389	MS.gene24826:CDS	35.0%
	AAACGCATCAATGACTTTGC+TGG	-	chr8.4:9447599-9447618	None:intergenic	40.0%
	AAGAACATGTACCTCCTTAG+TGG	-	chr8.4:9447912-9447931	None:intergenic	40.0%
	ACACTAACGTCAGAATCAAG+TGG	-	chr8.4:9448439-9448458	None:intergenic	40.0%
	ACTATGTCAACAGAAGGTTG+GGG	-	chr8.4:9447935-9447954	None:intergenic	40.0%
	ATGTGCCTCTTAACGAAGTA+GGG	-	chr8.4:9447662-9447681	None:intergenic	40.0%
	ATGTTCAAGTCCTTGGAAGA+AGG	+	chr8.4:9448488-9448507	MS.gene24826:CDS	40.0%
	CAACTATGTCAACAGAAGGT+TGG	-	chr8.4:9447937-9447956	None:intergenic	40.0%
	CACTAACGTCAGAATCAAGT+GGG	-	chr8.4:9448438-9448457	None:intergenic	40.0%
	CACTTCTACCAGTGTGATAT+GGG	-	chr8.4:9448147-9448166	None:intergenic	40.0%
	CATGGTATCGCTGAGATTAA+CGG	+	chr8.4:9448323-9448342	MS.gene24826:CDS	40.0%
	CCATGATGCCGAAAACAATA+TGG	-	chr8.4:9448308-9448327	None:intergenic	40.0%
	CCCTTAAGAATATGCTCCTT+TGG	+	chr8.4:9447821-9447840	MS.gene24826:CDS	40.0%
	CTTGTAAGGAGAGAATCGTT+AGG	-	chr8.4:9447757-9447776	None:intergenic	40.0%
	GAAACTATCCCATATCACAC+TGG	+	chr8.4:9448136-9448155	MS.gene24826:CDS	40.0%
	GGGTTAAGAATCAACAAGGT+TGG	+	chr8.4:9448390-9448409	MS.gene24826:CDS	40.0%
	TCAAATGTGTCAAACGGTCA+TGG	+	chr8.4:9447618-9447637	MS.gene24826:CDS	40.0%
	TCACTTCTACCAGTGTGATA+TGG	-	chr8.4:9448148-9448167	None:intergenic	40.0%
	TCTCGTGATCTTTCCATCTA+TGG	+	chr8.4:9447709-9447728	MS.gene24826:CDS	40.0%
	TGCCGAAAACAATATGGAAC+TGG	-	chr8.4:9448302-9448321	None:intergenic	40.0%
!	CCATATTGTTTTCGGCATCA+TGG	+	chr8.4:9448305-9448324	MS.gene24826:CDS	40.0%
!!	TAAGAGCTTTGGAGGAGATT+TGG	+	chr8.4:9447550-9447569	MS.gene24826:CDS	40.0%
!!!	CTTTTTTGGCGATGAGGATT+TGG	+	chr8.4:9448369-9448388	MS.gene24826:CDS	40.0%
!!!	TGTTTTGGAAGTCAAAGGAG+AGG	-	chr8.4:9448256-9448275	None:intergenic	40.0%
	ACATGTACCTCCTTAGTGGT+CGG	-	chr8.4:9447908-9447927	None:intergenic	45.0%
	AGACTCCCTACTTCGTTAAG+AGG	+	chr8.4:9447654-9447673	MS.gene24826:CDS	45.0%
	ATGCTCCTTTGGTCATTGCA+AGG	+	chr8.4:9447832-9447851	MS.gene24826:CDS	45.0%
	CATGTGCCTCTTAACGAAGT+AGG	-	chr8.4:9447663-9447682	None:intergenic	45.0%
	GATACTAGGGCAAGGGATAA+GGG	-	chr8.4:9448110-9448129	None:intergenic	45.0%
	TACACCCTTGCAATGACCAA+AGG	-	chr8.4:9447840-9447859	None:intergenic	45.0%
	TGCTCCTTTGGTCATTGCAA+GGG	+	chr8.4:9447833-9447852	MS.gene24826:CDS	45.0%
	TGGAGACAGAGATATTAGCG+AGG	+	chr8.4:9447570-9447589	MS.gene24826:CDS	45.0%
	TTCAAGTCCTTGGAAGAAGG+TGG	+	chr8.4:9448491-9448510	MS.gene24826:CDS	45.0%
	TTTGTGTCCACCTTCTTCCA+AGG	-	chr8.4:9448501-9448520	None:intergenic	45.0%
!!!	GTCGAACTTTTTTGGCGATG+AGG	+	chr8.4:9448363-9448382	MS.gene24826:CDS	45.0%
	CATGTACCTCCTTAGTGGTC+GGG	-	chr8.4:9447907-9447926	None:intergenic	50.0%
	CTGAAGGGATACTAGGGCAA+GGG	-	chr8.4:9448117-9448136	None:intergenic	50.0%
	GGATACTAGGGCAAGGGATA+AGG	-	chr8.4:9448111-9448130	None:intergenic	50.0%
	TCTGAAGGGATACTAGGGCA+AGG	-	chr8.4:9448118-9448137	None:intergenic	50.0%
	TTTGTGGAACCCGACCACTA+AGG	+	chr8.4:9447895-9447914	MS.gene24826:CDS	50.0%
	GTGGAACCCGACCACTAAGG+AGG	+	chr8.4:9447898-9447917	MS.gene24826:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	9447545	9448526	9447545	ID=MS.gene24826
chr8.4	mRNA	9447545	9448526	9447545	ID=MS.gene24826.t1;Parent=MS.gene24826
chr8.4	exon	9447545	9448163	9447545	ID=MS.gene24826.t1.exon1;Parent=MS.gene24826.t1
chr8.4	CDS	9447545	9448163	9447545	ID=cds.MS.gene24826.t1;Parent=MS.gene24826.t1
chr8.4	exon	9448222	9448526	9448222	ID=MS.gene24826.t1.exon2;Parent=MS.gene24826.t1
chr8.4	CDS	9448222	9448526	9448222	ID=cds.MS.gene24826.t1;Parent=MS.gene24826.t1

Gene Sequence

>MS.gene24826

ATGAGTAAGAGCTTTGGAGGAGATTTGGAGACAGAGATATTAGCGAGGCTTCCAGCAAAGTCATTGATGCGTTTCAAATGTGTCAAACGGTCATGGAATGCTCTCTTGAAGACTCCCTACTTCGTTAAGAGGCACATGCAGATGAACATGTCTGACGAGCATCGTCTCGTGATCTTTCCATCTATGGTACAAGAAGAAGAAAAGAATGCCCTAACGATTCTCTCCTTACAAGACAACCCAACAATAACACCAATAAGAAACATCTTTTCCAAAAACCCCTTAAGAATATGCTCCTTTGGTCATTGCAAGGGTGTATTCTGTATCCAAGAAGATCATCGTAAAGACTTAGTTTTGTGGAACCCGACCACTAAGGAGGTACATGTTCTTCCCCAACCTTCTGTTGACATAGTTGAAGTTGAAAAAGCTGAAGAATTGATTGGTTTTGGTGCTGATGCCAACACCAATGAATTCAAACTCGTCAAAGTCGGTATCCATCGTCATAAACATTGCTTTATTTCTTTTTCATCATCTCAAGTTTATGATCATAACAATAAATCATGGACCCTTATCCCTTGCCCTAGTATCCCTTCAGAAACTATCCCATATCACACTGGTAGAAGTGAGAACAACTACAATACTCTTGACTCTTGTTAATGGTGTTTATCATTGGCTTATAGGCCCTAACCATAATGACCACAATTTTAACATCCTCTCCTTTGACTTCCAAAACAATCAATTTCAACTACTGGAGTCTCCAGTTCCATATTGTTTTCGGCATCATGGTATCGCTGAGATTAACGGTTCCCTTGCTTATGTTAGTCGAACTTTTTTGGCGATGAGGATTTGGGTTAAGAATCAACAAGGTTGGGTCTTGAAATACAACATAAAGTCCCACTTGATTCTGACGTTAGTGTTGTACGTGTTCTTTCAAAGGGGAAGAATGATGTTCAAGTCCTTGGAAGAAGGTGGACACAAAATTTGA

Protein sequence

>MS.gene24826.t1

MSKSFGGDLETEILARLPAKSLMRFKCVKRSWNALLKTPYFVKRHMQMNMSDEHRLVIFPSMVQEEEKNALTILSLQDNPTITPIRNIFSKNPLRICSFGHCKGVFCIQEDHRKDLVLWNPTTKEVHVLPQPSVDIVEVEKAEELIGFGADANTNEFKLVKVGIHRHKHCFISFSSSQVYDHNNKSWTLIPCPSIPSETIPYHTGRSPNHNDHNFNILSFDFQNNQFQLLESPVPYCFRHHGIAEINGSLAYVSRTFLAMRIWVKNQQGWVLKYNIKSHLILTLVLYVFFQRGRMMFKSLEEGGHKI