AlfalfaGEDB | MS.gene50320

M. sativa cultivar XinJiangDaYe / MS.gene50320

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50320.t1	XP_003605036.1	71	248	68	2	1	248	127	370	9.80E-94	353.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50320.t1	Q8GXC7	29.1	151	97	3	13	163	214	354	1.1e-08	62.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50320.t1	G7JVT1	71.0	248	68	2	1	248	127	370	7.0e-94	353.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene016524	MS.gene50320	PPI
MS.gene50320	MS.gene032969	PPI
MS.gene87559	MS.gene50320	PPI
MS.gene50304	MS.gene50320	PPI
MS.gene041473	MS.gene50320	PPI
MS.gene50336	MS.gene50320	PPI
MS.gene50320	MS.gene42445	PPI
MS.gene59943	MS.gene50320	PPI
MS.gene50320	MS.gene22715	PPI
MS.gene31587	MS.gene50320	PPI
MS.gene036557	MS.gene50320	PPI
MS.gene041393	MS.gene50320	PPI
MS.gene033441	MS.gene50320	PPI
MS.gene063474	MS.gene50320	PPI
MS.gene048193	MS.gene50320	PPI
MS.gene50320	MS.gene36595	PPI
MS.gene023996	MS.gene50320	PPI
MS.gene063826	MS.gene50320	PPI
MS.gene060367	MS.gene50320	PPI
MS.gene84698	MS.gene50320	PPI
MS.gene44892	MS.gene50320	PPI
MS.gene50320	MS.gene061240	PPI
MS.gene036664	MS.gene50320	PPI
MS.gene58239	MS.gene50320	PPI
MS.gene023999	MS.gene50320	PPI
MS.gene066641	MS.gene50320	PPI
MS.gene024011	MS.gene50320	PPI
MS.gene50320	MS.gene50311	PPI
MS.gene000038	MS.gene50320	PPI
MS.gene57531	MS.gene50320	PPI
MS.gene064111	MS.gene50320	PPI
MS.gene87584	MS.gene50320	PPI
MS.gene50320	MS.gene035234	PPI
MS.gene50320	MS.gene058989	PPI
MS.gene67501	MS.gene50320	PPI
MS.gene50320	MS.gene041468	PPI
MS.gene39262	MS.gene50320	PPI
MS.gene58241	MS.gene50320	PPI
MS.gene053256	MS.gene50320	PPI
MS.gene025887	MS.gene50320	PPI
MS.gene019507	MS.gene50320	PPI
MS.gene045474	MS.gene50320	PPI
MS.gene75875	MS.gene50320	PPI
MS.gene041470	MS.gene50320	PPI
MS.gene058694	MS.gene50320	PPI
MS.gene064090	MS.gene50320	PPI
MS.gene024979	MS.gene50320	PPI
MS.gene058701	MS.gene50320	PPI
MS.gene27284	MS.gene50320	PPI
MS.gene058989	MS.gene50320	PPI
MS.gene032969	MS.gene50320	PPI
MS.gene000036	MS.gene50320	PPI
MS.gene015089	MS.gene50320	PPI
MS.gene006710	MS.gene50320	PPI
MS.gene90743	MS.gene50320	PPI
MS.gene50320	MS.gene044425	PPI
MS.gene44885	MS.gene50320	PPI
MS.gene011679	MS.gene50320	PPI
MS.gene87554	MS.gene50320	PPI
MS.gene033079	MS.gene50320	PPI
MS.gene64001	MS.gene50320	PPI
MS.gene57533	MS.gene50320	PPI
MS.gene50320	MS.gene24173	PPI
MS.gene51190	MS.gene50320	PPI
MS.gene032970	MS.gene50320	PPI
MS.gene035238	MS.gene50320	PPI
MS.gene50320	MS.gene27022	PPI
MS.gene77856	MS.gene50320	PPI
MS.gene24826	MS.gene50320	PPI
MS.gene57532	MS.gene50320	PPI
MS.gene68890	MS.gene50320	PPI
MS.gene40887	MS.gene50320	PPI
MS.gene50320	MS.gene023999	PPI
MS.gene50320	MS.gene036599	PPI
MS.gene80610	MS.gene50320	PPI
MS.gene034688	MS.gene50320	PPI
MS.gene51188	MS.gene50320	PPI
MS.gene63655	MS.gene50320	PPI
MS.gene060366	MS.gene50320	PPI
MS.gene047279	MS.gene50320	PPI
MS.gene41046	MS.gene50320	PPI
MS.gene063472	MS.gene50320	PPI
MS.gene57529	MS.gene50320	PPI
MS.gene50320	MS.gene000036	PPI
MS.gene024000	MS.gene50320	PPI
MS.gene80884	MS.gene50320	PPI
MS.gene87585	MS.gene50320	PPI
MS.gene009883	MS.gene50320	PPI
MS.gene42445	MS.gene50320	PPI
MS.gene041395	MS.gene50320	PPI
MS.gene40886	MS.gene50320	PPI
MS.gene40902	MS.gene50320	PPI
MS.gene033427	MS.gene50320	PPI
MS.gene03060	MS.gene50320	PPI
MS.gene27051	MS.gene50320	PPI
MS.gene50320	MS.gene009893	PPI
MS.gene060368	MS.gene50320	PPI
MS.gene033875	MS.gene50320	PPI
MS.gene041474	MS.gene50320	PPI
MS.gene77704	MS.gene50320	PPI
MS.gene058696	MS.gene50320	PPI
MS.gene27020	MS.gene50320	PPI
MS.gene066620	MS.gene50320	PPI
MS.gene035236	MS.gene50320	PPI
MS.gene50305	MS.gene50320	PPI
MS.gene86273	MS.gene50320	PPI
MS.gene041394	MS.gene50320	PPI
MS.gene059157	MS.gene50320	PPI
MS.gene51208	MS.gene50320	PPI
MS.gene50320	MS.gene50305	PPI
MS.gene57525	MS.gene50320	PPI
MS.gene028390	MS.gene50320	PPI
MS.gene62398	MS.gene50320	PPI
MS.gene60027	MS.gene50320	PPI
MS.gene064083	MS.gene50320	PPI
MS.gene28758	MS.gene50320	PPI
MS.gene045475	MS.gene50320	PPI
MS.gene88776	MS.gene50320	PPI
MS.gene009893	MS.gene50320	PPI
MS.gene35068	MS.gene50320	PPI
MS.gene041390	MS.gene50320	PPI
MS.gene90744	MS.gene50320	PPI
MS.gene51204	MS.gene50320	PPI
MS.gene58783	MS.gene50320	PPI
MS.gene041468	MS.gene50320	PPI
MS.gene058693	MS.gene50320	PPI
MS.gene92376	MS.gene50320	PPI
MS.gene50329	MS.gene50320	PPI
MS.gene070462	MS.gene50320	PPI
MS.gene31637	MS.gene50320	PPI
MS.gene50320	MS.gene63657	PPI
MS.gene87573	MS.gene50320	PPI
MS.gene50320	MS.gene023996	PPI
MS.gene57537	MS.gene50320	PPI
MS.gene42447	MS.gene50320	PPI
MS.gene034762	MS.gene50320	PPI
MS.gene064114	MS.gene50320	PPI
MS.gene50320	MS.gene045473	PPI
MS.gene059156	MS.gene50320	PPI
MS.gene009891	MS.gene50320	PPI
MS.gene82082	MS.gene50320	PPI
MS.gene22715	MS.gene50320	PPI
MS.gene50306	MS.gene50320	PPI
MS.gene90742	MS.gene50320	PPI
MS.gene58316	MS.gene50320	PPI
MS.gene38220	MS.gene50320	PPI
MS.gene57535	MS.gene50320	PPI
MS.gene012215	MS.gene50320	PPI
MS.gene024008	MS.gene50320	PPI
MS.gene87200	MS.gene50320	PPI
MS.gene58311	MS.gene50320	PPI
MS.gene58319	MS.gene50320	PPI
MS.gene058669	MS.gene50320	PPI
MS.gene59637	MS.gene50320	PPI
MS.gene26830	MS.gene50320	PPI
MS.gene033432	MS.gene50320	PPI
MS.gene045473	MS.gene50320	PPI
MS.gene044425	MS.gene50320	PPI
MS.gene041489	MS.gene50320	PPI
MS.gene50320	MS.gene034680	PPI
MS.gene59639	MS.gene50320	PPI
MS.gene031590	MS.gene50320	PPI
MS.gene060370	MS.gene50320	PPI
MS.gene50327	MS.gene50320	PPI
MS.gene066635	MS.gene50320	PPI
MS.gene010758	MS.gene50320	PPI
MS.gene96406	MS.gene50320	PPI
MS.gene87586	MS.gene50320	PPI
MS.gene57530	MS.gene50320	PPI
MS.gene50326	MS.gene50320	PPI
MS.gene42451	MS.gene50320	PPI
MS.gene51200	MS.gene50320	PPI
MS.gene50339	MS.gene50320	PPI
MS.gene50320	MS.gene024009	PPI
MS.gene54541	MS.gene50320	PPI
MS.gene046958	MS.gene50320	PPI
MS.gene87564	MS.gene50320	PPI
MS.gene50320	MS.gene006705	PPI
MS.gene88774	MS.gene50320	PPI
MS.gene42452	MS.gene50320	PPI
MS.gene40986	MS.gene50320	PPI
MS.gene063414	MS.gene50320	PPI
MS.gene50320	MS.gene38220	PPI
MS.gene69307	MS.gene50320	PPI
MS.gene009892	MS.gene50320	PPI
MS.gene036662	MS.gene50320	PPI
MS.gene57526	MS.gene50320	PPI
MS.gene50320	MS.gene058696	PPI
MS.gene021553	MS.gene50320	PPI
MS.gene50320	MS.gene035238	PPI
MS.gene051820	MS.gene50320	PPI
MS.gene26957	MS.gene50320	PPI
MS.gene97996	MS.gene50320	PPI
MS.gene036582	MS.gene50320	PPI
MS.gene27021	MS.gene50320	PPI
MS.gene034680	MS.gene50320	PPI
MS.gene035235	MS.gene50320	PPI
MS.gene58320	MS.gene50320	PPI
MS.gene26101	MS.gene50320	PPI
MS.gene066120	MS.gene50320	PPI
MS.gene27283	MS.gene50320	PPI
MS.gene63657	MS.gene50320	PPI
MS.gene053299	MS.gene50320	PPI
MS.gene50320	MS.gene80610	PPI
MS.gene58781	MS.gene50320	PPI
MS.gene57717	MS.gene50320	PPI
MS.gene011106	MS.gene50320	PPI
MS.gene033440	MS.gene50320	PPI
MS.gene44886	MS.gene50320	PPI
MS.gene87562	MS.gene50320	PPI
MS.gene066623	MS.gene50320	PPI
MS.gene038756	MS.gene50320	PPI
MS.gene40904	MS.gene50320	PPI
MS.gene24286	MS.gene50320	PPI
MS.gene40984	MS.gene50320	PPI
MS.gene033442	MS.gene50320	PPI
MS.gene000035	MS.gene50320	PPI
MS.gene50320	MS.gene041391	PPI
MS.gene024420	MS.gene50320	PPI
MS.gene87569	MS.gene50320	PPI
MS.gene041491	MS.gene50320	PPI
MS.gene48221	MS.gene50320	PPI
MS.gene019504	MS.gene50320	PPI
MS.gene51207	MS.gene50320	PPI
MS.gene50311	MS.gene50320	PPI
MS.gene059096	MS.gene50320	PPI
MS.gene57528	MS.gene50320	PPI
MS.gene50297	MS.gene50320	PPI
MS.gene006711	MS.gene50320	PPI
MS.gene27285	MS.gene50320	PPI
MS.gene50320	MS.gene40984	PPI
MS.gene58716	MS.gene50320	PPI
MS.gene68580	MS.gene50320	PPI
MS.gene033444	MS.gene50320	PPI
MS.gene019505	MS.gene50320	PPI
MS.gene053257	MS.gene50320	PPI
MS.gene045476	MS.gene50320	PPI
MS.gene58785	MS.gene50320	PPI
MS.gene50320	MS.gene016220	PPI
MS.gene50320	MS.gene024008	PPI
MS.gene034690	MS.gene50320	PPI
MS.gene024009	MS.gene50320	PPI
MS.gene066639	MS.gene50320	PPI
MS.gene26949	MS.gene50320	PPI
MS.gene51189	MS.gene50320	PPI
MS.gene036599	MS.gene50320	PPI
MS.gene044426	MS.gene50320	PPI
MS.gene85454	MS.gene50320	PPI
MS.gene96407	MS.gene50320	PPI
MS.gene036558	MS.gene50320	PPI
MS.gene50309	MS.gene50320	PPI
MS.gene036760	MS.gene50320	PPI
MS.gene77857	MS.gene50320	PPI
MS.gene27022	MS.gene50320	PPI
MS.gene43790	MS.gene50320	PPI
MS.gene57527	MS.gene50320	PPI
MS.gene51191	MS.gene50320	PPI
MS.gene50320	MS.gene58240	PPI
MS.gene50320	MS.gene27284	PPI
MS.gene033426	MS.gene50320	PPI
MS.gene035237	MS.gene50320	PPI
MS.gene016220	MS.gene50320	PPI
MS.gene064086	MS.gene50320	PPI
MS.gene034681	MS.gene50320	PPI
MS.gene034677	MS.gene50320	PPI
MS.gene50298	MS.gene50320	PPI
MS.gene036584	MS.gene50320	PPI
MS.gene67687	MS.gene50320	PPI
MS.gene035261	MS.gene50320	PPI
MS.gene063670	MS.gene50320	PPI
MS.gene27319	MS.gene50320	PPI
MS.gene066626	MS.gene50320	PPI
MS.gene71159	MS.gene50320	PPI
MS.gene019506	MS.gene50320	PPI
MS.gene006705	MS.gene50320	PPI
MS.gene058692	MS.gene50320	PPI
MS.gene50320	MS.gene033442	PPI
MS.gene033083	MS.gene50320	PPI
MS.gene69309	MS.gene50320	PPI
MS.gene63658	MS.gene50320	PPI
MS.gene024002	MS.gene50320	PPI
MS.gene033081	MS.gene50320	PPI
MS.gene036581	MS.gene50320	PPI
MS.gene035263	MS.gene50320	PPI
MS.gene57538	MS.gene50320	PPI
MS.gene035262	MS.gene50320	PPI
MS.gene034686	MS.gene50320	PPI
MS.gene40982	MS.gene50320	PPI
MS.gene070461	MS.gene50320	PPI
MS.gene003076	MS.gene50320	PPI
MS.gene50320	MS.gene041489	PPI
MS.gene58315	MS.gene50320	PPI
MS.gene058703	MS.gene50320	PPI
MS.gene87557	MS.gene50320	PPI
MS.gene50320	MS.gene024000	PPI
MS.gene030114	MS.gene50320	PPI
MS.gene036663	MS.gene50320	PPI
MS.gene87563	MS.gene50320	PPI
MS.gene033431	MS.gene50320	PPI
MS.gene064109	MS.gene50320	PPI
MS.gene24212	MS.gene50320	PPI
MS.gene041475	MS.gene50320	PPI
MS.gene40988	MS.gene50320	PPI
MS.gene81242	MS.gene50320	PPI
MS.gene64203	MS.gene50320	PPI
MS.gene045140	MS.gene50320	PPI
MS.gene024004	MS.gene50320	PPI
MS.gene42444	MS.gene50320	PPI
MS.gene51202	MS.gene50320	PPI
MS.gene44428	MS.gene50320	PPI
MS.gene059101	MS.gene50320	PPI
MS.gene041391	MS.gene50320	PPI
MS.gene50320	MS.gene57538	PPI
MS.gene26829	MS.gene50320	PPI
MS.gene064104	MS.gene50320	PPI
MS.gene40878	MS.gene50320	PPI
MS.gene50320	MS.gene27319	PPI
MS.gene36595	MS.gene50320	PPI
MS.gene51201	MS.gene50320	PPI
MS.gene88416	MS.gene50320	PPI
MS.gene033443	MS.gene50320	PPI
MS.gene035234	MS.gene50320	PPI
MS.gene54049	MS.gene50320	PPI
MS.gene50337	MS.gene50320	PPI
MS.gene43789	MS.gene50320	PPI
MS.gene061240	MS.gene50320	PPI
MS.gene50320	MS.gene064083	PPI
MS.gene50332	MS.gene50320	PPI
MS.gene072177	MS.gene50320	PPI
MS.gene58722	MS.gene50320	PPI
MS.gene064091	MS.gene50320	PPI
MS.gene064112	MS.gene50320	PPI
MS.gene24208	MS.gene50320	PPI
MS.gene061241	MS.gene50320	PPI
MS.gene50307	MS.gene50320	PPI
MS.gene24213	MS.gene50320	PPI
MS.gene43796	MS.gene50320	PPI
MS.gene044429	MS.gene50320	PPI
MS.gene58312	MS.gene50320	PPI
MS.gene36704	MS.gene50320	PPI
MS.gene50320	MS.gene28758	PPI
MS.gene24173	MS.gene50320	PPI
MS.gene036556	MS.gene50320	PPI
MS.gene58313	MS.gene50320	PPI
MS.gene066622	MS.gene50320	PPI
MS.gene44887	MS.gene50320	PPI
MS.gene85043	MS.gene50320	PPI
MS.gene39265	MS.gene50320	PPI
MS.gene033430	MS.gene50320	PPI
MS.gene44883	MS.gene50320	PPI
MS.gene036583	MS.gene50320	PPI
MS.gene88780	MS.gene50320	PPI
MS.gene87588	MS.gene50320	PPI
MS.gene055694	MS.gene50320	PPI
MS.gene017412	MS.gene50320	PPI
MS.gene58314	MS.gene50320	PPI
MS.gene96448	MS.gene50320	PPI
MS.gene51192	MS.gene50320	PPI
MS.gene77858	MS.gene50320	PPI
MS.gene041392	MS.gene50320	PPI
MS.gene58317	MS.gene50320	PPI
MS.gene58240	MS.gene50320	PPI
MS.gene044563	MS.gene50320	PPI
MS.gene069075	MS.gene50320	PPI
MS.gene40985	MS.gene50320	PPI
MS.gene031591	MS.gene50320	PPI
MS.gene50301	MS.gene50320	PPI
MS.gene51199	MS.gene50320	PPI
MS.gene58321	MS.gene50320	PPI
MS.gene50320	MS.gene058703	PPI
MS.gene041388	MS.gene50320	PPI
MS.gene064108	MS.gene50320	PPI
MS.gene062698	MS.gene50320	PPI
MS.gene57536	MS.gene50320	PPI
MS.gene96126	MS.gene50320	PPI
MS.gene019503	MS.gene50320	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene50320.t1	MTR_4g023120	74.597	248	59	2	1	248	127	370	2.80e-130	373
MS.gene50320.t1	MTR_4g023070	73.684	247	61	2	1	247	127	369	3.90e-126	362
MS.gene50320.t1	MTR_4g021785	56.855	248	80	4	1	247	133	354	6.31e-86	259
MS.gene50320.t1	MTR_4g023090	54.331	254	100	6	2	248	142	386	1.06e-83	255
MS.gene50320.t1	MTR_4g023080	56.048	248	81	5	1	247	133	353	7.29e-82	249
MS.gene50320.t1	MTR_4g023130	55.645	248	82	5	1	247	92	312	7.32e-81	245
MS.gene50320.t1	MTR_4g023380	48.364	275	79	7	1	248	141	379	8.23e-72	224
MS.gene50320.t1	MTR_6g060650	51.250	240	90	6	12	247	156	372	1.05e-70	221
MS.gene50320.t1	MTR_4g023200	52.016	248	94	7	1	246	134	358	1.20e-68	215
MS.gene50320.t1	MTR_3g103020	51.440	243	90	6	13	248	157	378	1.44e-68	216
MS.gene50320.t1	MTR_4g116330	48.594	249	103	5	1	245	150	377	2.89e-67	213
MS.gene50320.t1	MTR_4g023190	52.419	248	92	7	1	246	134	357	4.44e-67	211
MS.gene50320.t1	MTR_8g433030	52.564	234	86	8	14	243	125	337	8.35e-66	207
MS.gene50320.t1	MTR_8g032390	51.429	245	91	9	3	243	150	370	8.72e-66	209
MS.gene50320.t1	MTR_4g023150	51.613	248	95	7	1	246	134	358	1.49e-65	207
MS.gene50320.t1	MTR_4g117720	50.813	246	91	8	9	245	151	375	1.83e-65	208
MS.gene50320.t1	MTR_4g117850	51.230	244	88	8	12	245	154	376	6.61e-65	206
MS.gene50320.t1	MTR_3g034180	49.416	257	101	9	2	248	252	489	4.06e-62	202
MS.gene50320.t1	MTR_4g109280	51.185	211	79	6	43	248	168	359	2.68e-61	197
MS.gene50320.t1	MTR_4g094365	47.843	255	104	6	1	248	132	364	8.67e-61	196
MS.gene50320.t1	MTR_8g433040	47.451	255	97	7	1	248	140	364	1.08e-60	195
MS.gene50320.t1	MTR_8g032380	47.451	255	97	7	1	248	140	364	1.08e-60	195
MS.gene50320.t1	MTR_4g023440	47.177	248	72	6	1	248	144	332	2.18e-60	193
MS.gene50320.t1	MTR_4g122850	50.000	260	96	12	1	248	127	364	2.54e-60	195
MS.gene50320.t1	MTR_4g116320	49.569	232	94	4	18	245	43	255	4.66e-60	190
MS.gene50320.t1	MTR_4g109270	48.133	241	96	6	12	248	149	364	1.10e-59	192
MS.gene50320.t1	MTR_4g118380	51.142	219	85	5	10	223	156	357	1.21e-58	190
MS.gene50320.t1	MTR_4g117770	48.963	241	98	7	12	248	148	367	1.11e-57	187
MS.gene50320.t1	MTR_4g117810	48.963	241	98	7	12	248	148	367	1.11e-57	187
MS.gene50320.t1	MTR_3g034160	48.031	254	103	8	2	245	138	372	1.61e-57	187
MS.gene50320.t1	MTR_4g117780	47.303	241	104	6	11	248	147	367	6.16e-57	186
MS.gene50320.t1	MTR_6g463430	50.481	208	80	4	44	248	15	202	1.23e-55	177
MS.gene50320.t1	MTR_5g097210	48.750	240	98	8	11	245	141	360	3.71e-55	181
MS.gene50320.t1	MTR_3g034130	47.009	234	96	8	2	226	138	352	6.74e-53	175
MS.gene50320.t1	MTR_8g040935	45.740	223	97	6	33	248	3	208	7.89e-53	170
MS.gene50320.t1	MTR_4g117870	43.825	251	83	9	1	248	72	267	2.82e-50	166
MS.gene50320.t1	MTR_4g118400	47.525	202	74	4	42	241	122	293	4.41e-50	166
MS.gene50320.t1	MTR_1g055135	42.041	245	119	6	10	247	146	374	8.10e-47	159
MS.gene50320.t1	MTR_5g070080	45.726	234	104	7	13	243	167	380	9.07e-47	160
MS.gene50320.t1	MTR_5g070130	42.105	247	114	8	5	241	142	369	1.08e-46	159
MS.gene50320.t1	MTR_4g116330	40.562	249	84	5	1	245	150	338	1.25e-46	158
MS.gene50320.t1	MTR_5g070088	43.162	234	114	5	13	243	163	380	1.36e-46	159
MS.gene50320.t1	MTR_1g055195	42.105	247	104	7	9	245	258	475	9.18e-45	157
MS.gene50320.t1	MTR_7g079400	41.107	253	108	10	12	248	110	337	4.51e-44	151
MS.gene50320.t1	MTR_4g118370	39.918	243	102	8	9	245	53	257	4.48e-42	144
MS.gene50320.t1	MTR_4g121580	42.739	241	87	9	11	247	155	348	6.35e-42	147
MS.gene50320.t1	MTR_4g117750	42.570	249	109	8	9	244	128	355	2.87e-41	147
MS.gene50320.t1	MTR_4g117750	47.183	142	57	3	111	246	352	481	1.18e-27	110
MS.gene50320.t1	MTR_4g117530	39.749	239	86	6	11	248	72	253	5.06e-41	141
MS.gene50320.t1	MTR_7g079370	39.076	238	118	7	12	241	131	349	2.46e-40	142
MS.gene50320.t1	MTR_8g102520	37.698	252	128	9	5	248	92	322	1.80e-39	139
MS.gene50320.t1	MTR_1g055250	39.516	248	118	9	10	248	46	270	5.96e-38	135
MS.gene50320.t1	MTR_1g055175	38.991	218	108	7	37	247	1	200	1.39e-36	128
MS.gene50320.t1	MTR_8g013010	62.500	96	33	2	12	107	195	287	2.16e-30	115
MS.gene50320.t1	MTR_4g117430	51.938	129	46	4	12	139	41	154	2.80e-30	110
MS.gene50320.t1	MTR_1g055165	40.805	174	82	5	77	247	162	317	7.42e-30	114
MS.gene50320.t1	MTR_4g118360	46.809	141	53	4	109	245	1	123	1.13e-29	108
MS.gene50320.t1	MTR_5g023000	54.545	110	36	2	141	248	2	99	6.53e-29	105
MS.gene50320.t1	MTR_4g114700	36.864	236	74	7	12	239	50	218	6.33e-28	107
MS.gene50320.t1	MTR_4g122860	36.318	201	87	6	51	248	158	320	5.06e-26	104
MS.gene50320.t1	MTR_8g098830	35.749	207	98	9	42	239	32	212	1.83e-25	100
MS.gene50320.t1	MTR_7g079450	39.623	159	69	6	93	247	1	136	6.11e-25	96.3
MS.gene50320.t1	MTR_2g048580	34.300	207	101	9	45	243	158	337	2.98e-24	99.4
MS.gene50320.t1	MTR_7g079420	33.197	244	103	10	12	246	951	1143	6.02e-24	100
MS.gene50320.t1	MTR_4g023430	54.737	95	26	2	159	248	140	222	3.58e-23	94.0
MS.gene50320.t1	MTR_7g117720	54.639	97	26	3	151	241	186	270	1.27e-21	91.3
MS.gene50320.t1	MTR_7g117720	53.333	60	26	1	11	70	132	189	3.92e-12	64.7
MS.gene50320.t1	MTR_4g116340	53.409	88	38	2	12	99	163	247	2.67e-20	87.0
MS.gene50320.t1	MTR_6g034720	48.936	94	45	2	12	104	72	163	4.32e-20	85.9
MS.gene50320.t1	MTR_2g021050	26.482	253	147	10	1	244	119	341	1.61e-15	75.5
MS.gene50320.t1	MTR_4g023100	48.837	86	36	2	170	248	35	119	3.05e-14	67.8
MS.gene50320.t1	MTR_1g094210	24.380	242	153	9	10	248	192	406	8.61e-14	70.5
MS.gene50320.t1	MTR_2g028160	28.947	190	118	7	7	187	158	339	1.32e-13	70.1
MS.gene50320.t1	MTR_4g061340	30.539	167	89	7	11	167	166	315	4.44e-13	68.2
MS.gene50320.t1	MTR_1g097510	26.531	196	123	8	48	238	91	270	8.77e-13	67.0
MS.gene50320.t1	MTR_1g094210	25.316	237	141	9	10	240	192	398	9.26e-13	67.4
MS.gene50320.t1	MTR_8g013005	57.143	56	22	1	194	247	3	58	4.19e-12	60.1
MS.gene50320.t1	MTR_2g021155	28.111	217	140	9	7	218	167	372	6.57e-12	65.5
MS.gene50320.t1	MTR_3g007330	28.436	211	130	8	7	215	179	370	7.94e-12	64.7
MS.gene50320.t1	MTR_1g097370	26.804	194	119	9	14	201	135	311	1.74e-11	63.9
MS.gene50320.t1	MTR_2g055970	24.268	239	149	9	10	240	346	560	2.29e-11	63.5
MS.gene50320.t1	MTR_2g024110	28.125	160	98	6	12	163	139	289	2.38e-11	63.2
MS.gene50320.t1	MTR_5g057790	33.136	169	95	8	10	177	187	338	2.79e-11	63.2
MS.gene50320.t1	MTR_1g068875	27.933	179	119	7	12	186	139	311	5.19e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 46 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTCTGGTTTGTTGGTATT+TGG	0.086574	4.4:-77986047	MS.gene50320:CDS
AATATATGCTTTGGTATTAA+AGG	0.228012	4.4:+77986412	None:intergenic
ATTCTGGTTTGTTGGTATTT+GGG	0.229679	4.4:-77986046	MS.gene50320:CDS
GGTGTTATTATTGGAAAATA+TGG	0.270531	4.4:-77985828	MS.gene50320:CDS
CTAATGATACAATTGAAATA+TGG	0.277707	4.4:-77985992	MS.gene50320:CDS
CTTCCTCAGCATGCCATTCC+TGG	0.279472	4.4:-77985921	MS.gene50320:CDS
TTGGGGAGTTTCTCAGTATA+TGG	0.280580	4.4:-77986028	MS.gene50320:CDS
CATTGTTGCCTTTGACTTAA+CGG	0.282469	4.4:-77986135	MS.gene50320:CDS
AAAGCATATATTAATCTATA+TGG	0.286604	4.4:-77986401	MS.gene50320:CDS
TATATTAATCTATATGGTTT+TGG	0.288428	4.4:-77986395	MS.gene50320:CDS
CCTCTCTATGATTCTAGAAA+TGG	0.298004	4.4:-77985885	MS.gene50320:CDS
TTACTACATTCTGGACATTC+TGG	0.311472	4.4:-77986062	MS.gene50320:CDS
TATATCGCTAATAACGAAAA+AGG	0.320626	4.4:-77986227	MS.gene50320:CDS
TTCTGGACATTCTGGTTTGT+TGG	0.356467	4.4:-77986054	MS.gene50320:CDS
GCTCTATGGTTAACATCATT+CGG	0.362391	4.4:+77986086	None:intergenic
CATAGAGCATTACTACATTC+TGG	0.400194	4.4:-77986071	MS.gene50320:CDS
CTCTCTATGATTCTAGAAAT+GGG	0.408827	4.4:-77985884	MS.gene50320:CDS
ATATAGATTAATATATGCTT+TGG	0.413914	4.4:+77986403	None:intergenic
CAGAATGTAGTAATGCTCTA+TGG	0.420565	4.4:+77986072	None:intergenic
CTCTATGGTTAACATCATTC+GGG	0.428042	4.4:+77986087	None:intergenic
TTCGCGTAGTGATTTAGCTT+TGG	0.431302	4.4:-77986162	MS.gene50320:CDS
TGGGGAGTTTCTCAGTATAT+GGG	0.433339	4.4:-77986027	MS.gene50320:CDS
AATACAAAATGCATTTGTCT+TGG	0.442608	4.4:-77985959	MS.gene50320:CDS
TTCTGGTTTGTTGGTATTTG+GGG	0.444276	4.4:-77986045	MS.gene50320:CDS
TAATGGGGATATTCATTGGT+TGG	0.445625	4.4:-77986186	MS.gene50320:CDS
AGATTTAATCCATTCTTAGT+TGG	0.453630	4.4:-77986326	MS.gene50320:CDS
GAGTCTCTACTTTCACTCTC+TGG	0.466024	4.4:-77985714	MS.gene50320:CDS
TAATGATACAATTGAAATAT+GGG	0.471725	4.4:-77985991	MS.gene50320:CDS
TTTCCTTTCCGTTAAGTCAA+AGG	0.472866	4.4:+77986127	None:intergenic
GAACGAACACCAACTAAGAA+TGG	0.485533	4.4:+77986317	None:intergenic
ATTATTGGAAAATATGGAAG+TGG	0.506731	4.4:-77985822	MS.gene50320:CDS
GGGCATCATTCCTACTCTAA+CGG	0.541897	4.4:-77985762	MS.gene50320:CDS
TTGGTATTAAAGGCAGACAT+TGG	0.575836	4.4:+77986422	None:intergenic
CATTTCTAGAATCATAGAGA+GGG	0.583999	4.4:+77985886	None:intergenic
CTCTGTATACACGACAACTT+CGG	0.592812	4.4:+77985734	None:intergenic
GTTAAAGTAGTCACCAGGAA+TGG	0.594405	4.4:+77985908	None:intergenic
TTGCCTTTGACTTAACGGAA+AGG	0.595155	4.4:-77986130	MS.gene50320:CDS
CCATTTCTAGAATCATAGAG+AGG	0.599306	4.4:+77985885	None:intergenic
TAATAGATGGAATGAAATCG+AGG	0.616079	4.4:-77986264	MS.gene50320:CDS
AGAGGGTTAAAGTAGTCACC+AGG	0.629382	4.4:+77985903	None:intergenic
AATAGATGGAATGAAATCGA+GGG	0.632236	4.4:-77986263	MS.gene50320:CDS
TTTGTGAAGTATAATGACAA+AGG	0.639076	4.4:-77985795	MS.gene50320:CDS
TTCGGATGAACCGTTAGAGT+AGG	0.651512	4.4:+77985752	None:intergenic
TCACCAGGAATGGCATGCTG+AGG	0.663042	4.4:+77985918	None:intergenic
TCAGTCTAGAGATGATTATG+TGG	0.684477	4.4:-77986366	MS.gene50320:CDS
GTCTAGAGATGATTATGTGG+TGG	0.720281	4.4:-77986363	MS.gene50320:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAGCATATATTAATCTATA+TGG	-	chr4.4:77985713-77985732	MS.gene50320:CDS	15.0%
!!	ATATAGATTAATATATGCTT+TGG	+	chr4.4:77985714-77985733	None:intergenic	15.0%
!!	TAATGATACAATTGAAATAT+GGG	-	chr4.4:77986123-77986142	MS.gene50320:CDS	15.0%
!!!	CATTTTTTGTAGAATATATA+GGG	+	chr4.4:77986267-77986286	None:intergenic	15.0%
!!!	TATATTAATCTATATGGTTT+TGG	-	chr4.4:77985719-77985738	MS.gene50320:CDS	15.0%
!!	AATATATGCTTTGGTATTAA+AGG	+	chr4.4:77985705-77985724	None:intergenic	20.0%
!!	CCTATATATTCTACAAAAAA+TGG	-	chr4.4:77986265-77986284	MS.gene50320:CDS	20.0%
!!	CTAATGATACAATTGAAATA+TGG	-	chr4.4:77986122-77986141	MS.gene50320:CDS	20.0%
!!!	ACAAAAAATGGTGTTATTAT+TGG	-	chr4.4:77986277-77986296	MS.gene50320:CDS	20.0%
!!!	CCATTTTTTGTAGAATATAT+AGG	+	chr4.4:77986268-77986287	None:intergenic	20.0%
!	AATACAAAATGCATTTGTCT+TGG	-	chr4.4:77986155-77986174	MS.gene50320:CDS	25.0%
!	AGATTTAATCCATTCTTAGT+TGG	-	chr4.4:77985788-77985807	MS.gene50320:CDS	25.0%
!	ATTATTGGAAAATATGGAAG+TGG	-	chr4.4:77986292-77986311	MS.gene50320:CDS	25.0%
!	TATATCGCTAATAACGAAAA+AGG	-	chr4.4:77985887-77985906	MS.gene50320:CDS	25.0%
!	TTTGTGAAGTATAATGACAA+AGG	-	chr4.4:77986319-77986338	MS.gene50320:CDS	25.0%
!!	TTTTCGTTATTAGCGATATA+AGG	+	chr4.4:77985887-77985906	None:intergenic	25.0%
!!	TTTTTAATGGGGATATTCAT+TGG	-	chr4.4:77985924-77985943	MS.gene50320:CDS	25.0%
!!!	GGTGTTATTATTGGAAAATA+TGG	-	chr4.4:77986286-77986305	MS.gene50320:CDS	25.0%
!!!	TCTCTTTTAGAGATAATAGA+TGG	-	chr4.4:77985837-77985856	MS.gene50320:CDS	25.0%
	AATAGATGGAATGAAATCGA+GGG	-	chr4.4:77985851-77985870	MS.gene50320:CDS	30.0%
	TAATAGATGGAATGAAATCG+AGG	-	chr4.4:77985850-77985869	MS.gene50320:CDS	30.0%
!	AATGACAAAGGACAGTTTTT+AGG	-	chr4.4:77986331-77986350	MS.gene50320:CDS	30.0%
!	ATGACAAAGGACAGTTTTTA+GGG	-	chr4.4:77986332-77986351	MS.gene50320:CDS	30.0%
!	CTCTCTATGATTCTAGAAAT+GGG	-	chr4.4:77986230-77986249	MS.gene50320:CDS	30.0%
!!	ATTCTGGTTTGTTGGTATTT+GGG	-	chr4.4:77986068-77986087	MS.gene50320:CDS	30.0%
!!	CATTTCTAGAATCATAGAGA+GGG	+	chr4.4:77986231-77986250	None:intergenic	30.0%
	AATAACGAAAAAGGAGATGG+AGG	-	chr4.4:77985896-77985915	MS.gene50320:CDS	35.0%
	CAGAATGTAGTAATGCTCTA+TGG	+	chr4.4:77986045-77986064	None:intergenic	35.0%
	CTCTATGGTTAACATCATTC+GGG	+	chr4.4:77986030-77986049	None:intergenic	35.0%
	GCTAATAACGAAAAAGGAGA+TGG	-	chr4.4:77985893-77985912	MS.gene50320:CDS	35.0%
	GCTCTATGGTTAACATCATT+CGG	+	chr4.4:77986031-77986050	None:intergenic	35.0%
	TAATGGGGATATTCATTGGT+TGG	-	chr4.4:77985928-77985947	MS.gene50320:CDS	35.0%
	TCAGTCTAGAGATGATTATG+TGG	-	chr4.4:77985748-77985767	MS.gene50320:CDS	35.0%
	TTACTACATTCTGGACATTC+TGG	-	chr4.4:77986052-77986071	MS.gene50320:CDS	35.0%
	TTTCCTTTCCGTTAAGTCAA+AGG	+	chr4.4:77985990-77986009	None:intergenic	35.0%
!	CATAGAGCATTACTACATTC+TGG	-	chr4.4:77986043-77986062	MS.gene50320:CDS	35.0%
!	CATTGTTGCCTTTGACTTAA+CGG	-	chr4.4:77985979-77985998	MS.gene50320:CDS	35.0%
!	CCTCTCTATGATTCTAGAAA+TGG	-	chr4.4:77986229-77986248	MS.gene50320:CDS	35.0%
!!	CATTCTGGTTTGTTGGTATT+TGG	-	chr4.4:77986067-77986086	MS.gene50320:CDS	35.0%
!!	CCATTTCTAGAATCATAGAG+AGG	+	chr4.4:77986232-77986251	None:intergenic	35.0%
!!	TTCTGGTTTGTTGGTATTTG+GGG	-	chr4.4:77986069-77986088	MS.gene50320:CDS	35.0%
!!!	ATGGAGGAGTGCTTTTTAAT+GGG	-	chr4.4:77985912-77985931	MS.gene50320:CDS	35.0%
	CTCTGTATACACGACAACTT+CGG	+	chr4.4:77986383-77986402	None:intergenic	40.0%
	GAACGAACACCAACTAAGAA+TGG	+	chr4.4:77985800-77985819	None:intergenic	40.0%
	GTCTAGAGATGATTATGTGG+TGG	-	chr4.4:77985751-77985770	MS.gene50320:CDS	40.0%
	GTTAAAGTAGTCACCAGGAA+TGG	+	chr4.4:77986209-77986228	None:intergenic	40.0%
	TGGGGAGTTTCTCAGTATAT+GGG	-	chr4.4:77986087-77986106	MS.gene50320:CDS	40.0%
	TTGGGGAGTTTCTCAGTATA+TGG	-	chr4.4:77986086-77986105	MS.gene50320:CDS	40.0%
!	TTCGCGTAGTGATTTAGCTT+TGG	-	chr4.4:77985952-77985971	MS.gene50320:CDS	40.0%
!	TTGCCTTTGACTTAACGGAA+AGG	-	chr4.4:77985984-77986003	MS.gene50320:CDS	40.0%
!!	TTCTGGACATTCTGGTTTGT+TGG	-	chr4.4:77986060-77986079	MS.gene50320:CDS	40.0%
!!!	GATGGAGGAGTGCTTTTTAA+TGG	-	chr4.4:77985911-77985930	MS.gene50320:CDS	40.0%
!!!	TGGAGGAGTGCTTTTTAATG+GGG	-	chr4.4:77985913-77985932	MS.gene50320:CDS	40.0%
	AGAGGGTTAAAGTAGTCACC+AGG	+	chr4.4:77986214-77986233	None:intergenic	45.0%
	GAGTCTCTACTTTCACTCTC+TGG	-	chr4.4:77986400-77986419	MS.gene50320:CDS	45.0%
	GGGCATCATTCCTACTCTAA+CGG	-	chr4.4:77986352-77986371	MS.gene50320:CDS	45.0%
	TTCGGATGAACCGTTAGAGT+AGG	+	chr4.4:77986365-77986384	None:intergenic	45.0%
	CTTCCTCAGCATGCCATTCC+TGG	-	chr4.4:77986193-77986212	MS.gene50320:CDS	55.0%
	TCACCAGGAATGGCATGCTG+AGG	+	chr4.4:77986199-77986218	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	77985695	77986441	77985695	ID=MS.gene50320
chr4.4	mRNA	77985695	77986441	77985695	ID=MS.gene50320.t1;Parent=MS.gene50320
chr4.4	exon	77985695	77986441	77985695	ID=MS.gene50320.t1.exon1;Parent=MS.gene50320.t1
chr4.4	CDS	77985695	77986441	77985695	ID=cds.MS.gene50320.t1;Parent=MS.gene50320.t1

Gene Sequence

>MS.gene50320

ATGTCTGCCTTTAATACCAAAGCATATATTAATCTATATGGTTTTGGTTATGATCAGTCTAGAGATGATTATGTGGTGGTTGTATTGTCTCGTAGATTTAATCCATTCTTAGTTGGTGTTCGTTCTTCACATTTAGAGTTTTTCTCTTTTAGAGATAATAGATGGAATGAAATCGAGGGCAGTCACTTACCTTATATCGCTAATAACGAAAAAGGAGATGGAGGAGTGCTTTTTAATGGGGATATTCATTGGTTGGCTTCGCGTAGTGATTTAGCTTTGGATGTCATTGTTGCCTTTGACTTAACGGAAAGGAAATTGTTAGATATGCTTCTCCCGAATGATGTTAACCATAGAGCATTACTACATTCTGGACATTCTGGTTTGTTGGTATTTGGGGAGTTTCTCAGTATATGGGCTAATGATAATGCTAATGATACAATTGAAATATGGGTGATGAAAGAATACAAAATGCATTTGTCTTGGACTAAAACTCTTGTTCTTCCTCAGCATGCCATTCCTGGTGACTACTTTAACCCTCTCTATGATTCTAGAAATGGGAAATACTTTCACCCTATATATTCTACAAAAAATGGTGTTATTATTGGAAAATATGGAAGTGGTAGATTTGTGAAGTATAATGACAAAGGACAGTTTTTAGGGCATCATTCCTACTCTAACGGTTCATCCGAAGTTGTCGTGTATACAGAGTCTCTACTTTCACTCTCTGGTGACAATGAGCATGTTTAA

Protein sequence

>MS.gene50320.t1

MSAFNTKAYINLYGFGYDQSRDDYVVVVLSRRFNPFLVGVRSSHLEFFSFRDNRWNEIEGSHLPYIANNEKGDGGVLFNGDIHWLASRSDLALDVIVAFDLTERKLLDMLLPNDVNHRALLHSGHSGLLVFGEFLSIWANDNANDTIEIWVMKEYKMHLSWTKTLVLPQHAIPGDYFNPLYDSRNGKYFHPIYSTKNGVIIGKYGSGRFVKYNDKGQFLGHHSYSNGSSEVVVYTESLLSLSGDNEHV