AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57527


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57527.t1 MTR_8g032390 73.973 365 70 4 1 363 31 372 0.0 514
MS.gene57527.t1 MTR_8g433040 72.877 365 81 5 1 361 9 359 0.0 510
MS.gene57527.t1 MTR_8g032380 72.877 365 81 5 1 361 9 359 0.0 510
MS.gene57527.t1 MTR_8g433030 62.740 365 78 7 1 363 31 339 5.02e-141 404
MS.gene57527.t1 MTR_3g103020 56.011 366 139 10 8 361 18 373 1.27e-125 366
MS.gene57527.t1 MTR_4g122850 57.224 353 134 11 21 361 12 359 9.97e-124 361
MS.gene57527.t1 MTR_4g094365 55.738 366 142 10 5 360 3 358 3.83e-121 354
MS.gene57527.t1 MTR_4g023090 53.887 373 144 10 9 361 15 379 9.63e-117 344
MS.gene57527.t1 MTR_4g023080 53.719 363 143 11 6 361 5 349 6.86e-114 335
MS.gene57527.t1 MTR_4g109270 54.795 365 139 13 10 361 8 359 1.88e-112 332
MS.gene57527.t1 MTR_4g021785 53.889 360 142 10 9 361 8 350 2.69e-112 331
MS.gene57527.t1 MTR_3g034180 52.533 375 146 11 8 361 121 484 1.20e-110 332
MS.gene57527.t1 MTR_4g109280 53.022 364 148 12 5 359 3 352 7.07e-110 325
MS.gene57527.t1 MTR_6g060650 53.117 369 148 9 9 360 7 367 1.04e-106 318
MS.gene57527.t1 MTR_3g034160 53.723 376 140 13 8 361 7 370 6.73e-105 313
MS.gene57527.t1 MTR_4g023070 49.202 376 154 11 10 361 3 365 9.04e-105 313
MS.gene57527.t1 MTR_4g116330 51.639 366 152 11 9 361 22 375 2.64e-104 312
MS.gene57527.t1 MTR_4g117780 51.913 366 148 14 10 361 11 362 6.21e-104 310
MS.gene57527.t1 MTR_3g034130 53.714 350 133 11 8 338 7 346 8.87e-104 310
MS.gene57527.t1 MTR_4g117850 52.589 367 143 14 9 359 22 373 3.11e-102 306
MS.gene57527.t1 MTR_4g023130 50.975 359 118 12 6 361 5 308 9.01e-101 300
MS.gene57527.t1 MTR_4g023120 47.340 376 161 12 10 361 3 365 9.63e-99 297
MS.gene57527.t1 MTR_4g117770 52.044 367 148 14 9 361 10 362 3.55e-98 296
MS.gene57527.t1 MTR_4g117810 52.044 367 148 14 9 361 10 362 3.55e-98 296
MS.gene57527.t1 MTR_4g117720 48.248 371 142 8 1 362 44 373 1.06e-97 295
MS.gene57527.t1 MTR_4g118380 50.986 355 144 8 9 339 7 355 1.86e-96 291
MS.gene57527.t1 MTR_5g070130 49.866 373 158 13 9 362 10 372 2.14e-95 289
MS.gene57527.t1 MTR_4g023380 49.340 379 143 11 9 360 15 371 7.08e-95 288
MS.gene57527.t1 MTR_5g097210 49.733 374 159 16 1 361 1 358 4.68e-93 283
MS.gene57527.t1 MTR_4g023190 47.838 370 168 9 1 361 1 354 6.29e-91 277
MS.gene57527.t1 MTR_5g070080 46.482 398 160 15 1 362 1 381 1.55e-90 277
MS.gene57527.t1 MTR_4g023200 48.108 370 168 9 1 361 1 355 6.45e-90 274
MS.gene57527.t1 MTR_1g055135 46.053 380 171 13 2 361 5 370 1.83e-89 274
MS.gene57527.t1 MTR_4g121580 46.739 368 150 12 3 356 4 339 6.84e-88 270
MS.gene57527.t1 MTR_5g070088 45.524 391 171 14 4 362 1 381 1.02e-87 270
MS.gene57527.t1 MTR_4g023150 46.900 371 171 10 1 361 1 355 5.37e-87 267
MS.gene57527.t1 MTR_4g023440 46.537 361 135 10 9 361 17 327 3.12e-84 259
MS.gene57527.t1 MTR_8g013010 52.985 268 113 6 5 266 49 309 4.17e-82 253
MS.gene57527.t1 MTR_4g116330 45.355 366 136 11 9 361 22 336 1.01e-80 250
MS.gene57527.t1 MTR_4g117750 47.709 371 158 13 8 360 1 353 7.44e-77 245
MS.gene57527.t1 MTR_4g117750 61.468 109 35 4 257 361 373 478 3.88e-28 115
MS.gene57527.t1 MTR_1g055165 42.005 369 150 9 1 361 1 313 2.27e-74 233
MS.gene57527.t1 MTR_1g055195 47.387 287 111 11 90 360 210 472 8.33e-66 216
MS.gene57527.t1 MTR_4g117870 44.407 295 117 8 72 361 10 262 9.89e-64 204
MS.gene57527.t1 MTR_8g040935 56.311 206 79 6 164 361 1 203 1.18e-60 194
MS.gene57527.t1 MTR_4g116340 50.450 222 88 4 3 218 29 234 2.44e-60 195
MS.gene57527.t1 MTR_4g116320 54.673 214 87 6 153 360 43 252 4.44e-59 192
MS.gene57527.t1 MTR_7g079400 43.253 289 139 10 88 362 56 333 5.79e-59 194
MS.gene57527.t1 MTR_4g118400 43.478 299 117 11 74 360 36 294 3.00e-58 191
MS.gene57527.t1 MTR_2g048580 36.800 375 187 17 1 362 1 338 5.66e-54 181
MS.gene57527.t1 MTR_7g079370 38.968 349 176 14 39 362 16 352 7.00e-54 181
MS.gene57527.t1 MTR_4g118370 46.429 252 96 8 119 361 34 255 1.73e-53 177
MS.gene57527.t1 MTR_6g463430 53.968 189 76 8 177 361 16 197 8.40e-51 169
MS.gene57527.t1 MTR_1g055250 46.698 212 100 6 148 353 49 253 9.90e-47 162
MS.gene57527.t1 MTR_8g102520 34.341 364 177 12 9 362 7 318 1.90e-46 161
MS.gene57527.t1 MTR_7g117720 46.411 209 89 6 1 204 1 191 9.01e-46 158
MS.gene57527.t1 MTR_7g117720 51.724 87 35 2 282 361 186 272 3.21e-15 75.5
MS.gene57527.t1 MTR_1g055175 48.958 192 85 7 177 360 9 195 6.55e-45 153
MS.gene57527.t1 MTR_4g117530 41.564 243 97 8 123 361 47 248 1.02e-42 149
MS.gene57527.t1 MTR_4g117430 49.383 162 69 5 106 266 3 152 7.49e-38 133
MS.gene57527.t1 MTR_7g079420 35.333 300 139 12 73 362 886 1140 1.41e-33 132
MS.gene57527.t1 MTR_1g094210 28.571 371 214 13 10 358 57 398 1.82e-32 125
MS.gene57527.t1 MTR_4g108820 32.313 294 155 9 9 301 41 291 3.09e-32 123
MS.gene57527.t1 MTR_8g101580 29.477 363 229 12 10 358 45 394 1.15e-31 123
MS.gene57527.t1 MTR_5g057690 32.680 306 174 12 10 306 46 328 2.20e-31 122
MS.gene57527.t1 MTR_1g094210 28.940 349 198 12 10 337 57 376 2.76e-31 122
MS.gene57527.t1 MTR_4g114700 35.849 265 102 8 106 357 9 218 9.89e-31 117
MS.gene57527.t1 MTR_4g107820 30.573 314 167 9 10 301 36 320 2.03e-30 120
MS.gene57527.t1 MTR_4g107780 30.573 314 167 9 10 301 36 320 2.03e-30 120
MS.gene57527.t1 MTR_5g057710 29.513 349 195 15 10 332 46 369 2.15e-30 120
MS.gene57527.t1 MTR_2g055970 29.759 373 221 16 7 358 208 560 2.48e-30 122
MS.gene57527.t1 MTR_4g107780 30.573 314 167 9 10 301 36 320 3.15e-30 119
MS.gene57527.t1 MTR_4g107820 30.573 314 167 9 10 301 36 320 3.25e-30 119
MS.gene57527.t1 MTR_8g098830 38.579 197 102 7 172 360 30 215 3.97e-30 115
MS.gene57527.t1 MTR_4g118360 53.600 125 47 4 242 360 1 120 8.53e-30 111
MS.gene57527.t1 MTR_1g097490 32.055 365 209 16 10 358 49 390 8.80e-30 118
MS.gene57527.t1 MTR_5g057790 30.836 347 206 16 10 339 46 375 9.46e-30 118
MS.gene57527.t1 MTR_3g007360 30.874 366 217 13 13 359 55 403 1.20e-29 118
MS.gene57527.t1 MTR_3g007410 30.623 369 214 14 13 359 55 403 2.18e-29 117
MS.gene57527.t1 MTR_1g097560 30.328 366 210 16 10 358 36 373 3.03e-29 116
MS.gene57527.t1 MTR_1g097330 28.852 357 226 12 10 352 16 358 4.98e-29 116
MS.gene57527.t1 MTR_3g007330 31.773 299 175 8 10 298 48 327 8.38e-29 115
MS.gene57527.t1 MTR_3g009310 32.248 307 168 11 10 298 42 326 1.11e-28 115
MS.gene57527.t1 MTR_1g054725 29.474 380 215 16 9 358 19 375 1.54e-28 114
MS.gene57527.t1 MTR_8g467140 30.897 301 187 10 8 299 30 318 4.95e-28 112
MS.gene57527.t1 MTR_2g021150 27.763 371 232 16 9 358 13 368 5.64e-28 113
MS.gene57527.t1 MTR_5g057020 31.803 305 173 13 10 306 46 323 8.08e-28 112
MS.gene57527.t1 MTR_2g029990 27.671 365 233 12 11 358 52 402 1.50e-27 112
MS.gene57527.t1 MTR_3g013740 29.747 316 180 11 10 299 44 343 2.24e-27 112
MS.gene57527.t1 MTR_4g133170 26.027 365 239 12 10 357 4 354 4.26e-27 110
MS.gene57527.t1 MTR_4g030830 28.710 411 205 16 10 358 9 393 1.33e-26 109
MS.gene57527.t1 MTR_2g021155 32.895 304 173 11 10 299 36 322 1.53e-26 111
MS.gene57527.t1 MTR_2g021155 28.042 189 116 7 119 299 711 887 8.08e-11 63.9
MS.gene57527.t1 MTR_4g055060 30.585 376 215 15 10 358 30 386 1.75e-26 108
MS.gene57527.t1 MTR_4g122860 38.830 188 76 7 182 360 157 314 2.46e-26 107
MS.gene57527.t1 MTR_4g122860 49.367 79 39 1 1 78 60 138 2.27e-13 70.9
MS.gene57527.t1 MTR_5g023000 65.169 89 26 3 277 361 7 94 2.81e-26 101
MS.gene57527.t1 MTR_3g014540 31.613 310 170 11 10 299 29 316 2.93e-26 108
MS.gene57527.t1 MTR_6g021880 30.719 306 166 11 21 299 31 317 2.96e-26 108
MS.gene57527.t1 MTR_5g022420 26.203 374 230 12 9 358 26 377 3.96e-26 108
MS.gene57527.t1 MTR_4g109290 40.881 159 56 3 9 162 8 133 7.00e-26 102
MS.gene57527.t1 MTR_2g426020 29.765 383 221 16 10 357 6 375 1.36e-25 107
MS.gene57527.t1 MTR_2g031720 28.232 379 237 14 6 361 2 368 1.92e-25 106
MS.gene57527.t1 MTR_5g011200 30.164 305 183 12 10 299 17 306 2.49e-25 105
MS.gene57527.t1 MTR_1g068875 26.230 366 236 13 10 357 4 353 2.92e-25 105
MS.gene57527.t1 MTR_3g011060 28.134 359 201 10 10 333 28 364 6.25e-25 104
MS.gene57527.t1 MTR_0667s0010 29.393 313 185 11 6 294 2 302 1.18e-24 104
MS.gene57527.t1 MTR_3g036430 27.577 359 214 13 10 358 20 342 1.53e-24 103
MS.gene57527.t1 MTR_2g046920 29.221 308 183 10 9 301 23 310 1.59e-24 103
MS.gene57527.t1 MTR_6g027910 28.760 379 221 19 13 358 12 374 1.99e-24 103
MS.gene57527.t1 MTR_4g061340 31.629 313 167 12 10 298 26 315 2.62e-24 102
MS.gene57527.t1 MTR_7g013590 30.744 309 170 10 13 299 39 325 3.61e-24 102
MS.gene57527.t1 MTR_4g037465 28.680 394 218 15 10 360 21 394 4.20e-24 102
MS.gene57527.t1 MTR_2g046900 30.449 312 182 11 9 301 27 322 5.56e-24 102
MS.gene57527.t1 MTR_3g006670 30.293 307 177 10 10 298 49 336 6.17e-24 102
MS.gene57527.t1 MTR_1g068860 27.946 297 191 8 10 294 4 289 1.31e-23 100
MS.gene57527.t1 MTR_2g028110 25.946 370 237 11 10 358 4 357 1.40e-23 100
MS.gene57527.t1 MTR_3g036335 28.609 381 213 16 10 358 41 394 1.41e-23 100
MS.gene57527.t1 MTR_3g013770 30.225 311 177 10 10 299 33 324 1.44e-23 100
MS.gene57527.t1 MTR_7g079450 43.571 140 69 4 226 362 1 133 2.06e-23 94.7
MS.gene57527.t1 MTR_1g115160 28.000 375 218 20 8 358 20 366 2.11e-23 100
MS.gene57527.t1 MTR_2g021190 28.610 367 229 15 10 358 21 372 2.54e-23 100
MS.gene57527.t1 MTR_3g014570 29.801 302 184 10 10 298 29 315 3.09e-23 99.8
MS.gene57527.t1 MTR_3g083640 29.067 375 213 18 10 358 55 402 3.13e-23 100
MS.gene57527.t1 MTR_3g007270 27.479 353 210 13 10 332 47 383 3.51e-23 100
MS.gene57527.t1 MTR_3g010870 26.720 378 218 15 10 358 37 384 4.67e-23 99.4
MS.gene57527.t1 MTR_1g056710 29.900 301 185 10 10 299 34 319 5.48e-23 99.4
MS.gene57527.t1 MTR_1g068835 26.630 368 235 13 10 358 4 355 5.94e-23 99.0
MS.gene57527.t1 MTR_3g006500 28.534 382 211 16 10 358 17 369 9.62e-23 98.2
MS.gene57527.t1 MTR_7g407070 31.410 312 177 13 10 294 32 333 1.08e-22 98.6
MS.gene57527.t1 MTR_8g099460 28.424 387 229 15 7 363 2 370 1.14e-22 98.6
MS.gene57527.t1 MTR_3g023930 28.883 367 210 16 10 358 34 367 1.17e-22 98.2
MS.gene57527.t1 MTR_1g050542 26.984 378 216 15 10 358 58 404 1.46e-22 98.2
MS.gene57527.t1 MTR_3g024150 29.231 325 147 15 13 299 38 317 1.49e-22 98.2
MS.gene57527.t1 MTR_6g016285 27.475 404 231 16 10 358 21 417 2.04e-22 98.2
MS.gene57527.t1 MTR_0044s0300 28.338 367 194 17 10 352 38 359 2.08e-22 97.8
MS.gene57527.t1 MTR_8g073550 34.673 199 102 9 9 191 29 215 2.20e-22 94.7
MS.gene57527.t1 MTR_3g009240 30.872 298 172 13 10 294 36 312 2.22e-22 97.4
MS.gene57527.t1 MTR_3g436150 30.164 305 184 10 10 294 32 327 2.22e-22 97.8
MS.gene57527.t1 MTR_3g083010 27.204 397 236 15 10 360 6 395 2.95e-22 97.4
MS.gene57527.t1 MTR_3g007430 28.000 300 185 9 13 298 46 328 2.97e-22 97.1
MS.gene57527.t1 MTR_2g426070 28.754 313 184 11 11 294 7 309 3.05e-22 97.4
MS.gene57527.t1 MTR_4g031770 28.133 391 213 19 10 358 4 368 3.19e-22 97.1
MS.gene57527.t1 MTR_2g043410 29.056 413 205 18 13 358 25 416 3.40e-22 97.4
MS.gene57527.t1 MTR_7g066100 28.922 408 216 18 7 360 8 395 3.57e-22 97.1
MS.gene57527.t1 MTR_0128s0070 27.949 390 223 15 10 357 22 395 3.67e-22 97.1
MS.gene57527.t1 MTR_2g028160 26.817 399 231 17 10 360 5 390 3.84e-22 97.4
MS.gene57527.t1 MTR_7g056760 27.342 395 230 17 9 358 22 404 4.18e-22 97.1
MS.gene57527.t1 MTR_0128s0020 28.645 391 220 16 10 357 18 392 4.38e-22 96.7
MS.gene57527.t1 MTR_7g077970 31.627 332 172 17 10 298 7 326 4.68e-22 97.1
MS.gene57527.t1 MTR_2g028130 27.020 396 238 15 10 363 5 391 7.27e-22 96.3
MS.gene57527.t1 MTR_1g054575 28.840 319 178 14 10 308 52 341 8.31e-22 97.4
MS.gene57527.t1 MTR_6g007135 26.384 307 198 8 10 299 26 321 9.49e-22 95.9
MS.gene57527.t1 MTR_5g069120 36.612 183 95 6 20 186 1 178 9.90e-22 91.3
MS.gene57527.t1 MTR_2g024110 29.101 378 227 18 10 360 4 367 1.15e-21 95.5
MS.gene57527.t1 MTR_3g010390 28.571 322 192 14 10 304 33 343 1.35e-21 95.5
MS.gene57527.t1 MTR_3g009260 30.508 295 174 12 10 294 41 314 1.45e-21 95.1
MS.gene57527.t1 MTR_5g056020 26.265 415 235 19 7 358 14 420 1.57e-21 95.9
MS.gene57527.t1 MTR_3g006570 29.319 382 211 21 10 358 21 376 1.58e-21 95.1
MS.gene57527.t1 MTR_1g055070 30.620 258 156 9 10 246 49 304 2.01e-21 94.7
MS.gene57527.t1 MTR_6g065980 29.431 299 165 14 10 294 16 282 2.21e-21 94.4
MS.gene57527.t1 MTR_2g426090 28.707 317 189 15 4 294 1 306 2.30e-21 94.7
MS.gene57527.t1 MTR_3g030350 29.897 291 185 11 10 294 35 312 2.82e-21 94.4
MS.gene57527.t1 MTR_4g024890 25.064 391 237 13 9 358 9 384 3.43e-21 94.0
MS.gene57527.t1 MTR_2g031680 25.789 380 239 14 6 363 2 360 4.57e-21 94.0
MS.gene57527.t1 MTR_2g021252 26.648 364 222 13 13 359 50 385 5.14e-21 93.6
MS.gene57527.t1 MTR_7g070830 27.795 331 187 12 10 294 21 345 6.08e-21 94.0
MS.gene57527.t1 MTR_2g025420 25.432 405 236 17 6 358 2 392 6.11e-21 94.0
MS.gene57527.t1 MTR_2g047832 27.273 352 195 14 9 318 28 360 6.36e-21 93.6
MS.gene57527.t1 MTR_3g036290 29.155 367 210 17 10 358 22 356 6.94e-21 92.8
MS.gene57527.t1 MTR_6g017280 27.914 326 188 12 4 298 3 312 7.40e-21 93.2
MS.gene57527.t1 MTR_7g066030 27.764 407 221 16 6 359 17 403 7.56e-21 93.2
MS.gene57527.t1 MTR_3g024040 29.825 285 171 10 17 294 38 300 9.09e-21 92.8
MS.gene57527.t1 MTR_2g047892 28.527 319 175 13 10 294 22 321 9.59e-21 92.8
MS.gene57527.t1 MTR_3g011020 28.084 381 202 16 10 357 28 369 1.01e-20 92.8
MS.gene57527.t1 MTR_3g030250 27.174 368 224 15 10 358 37 379 1.17e-20 92.4
MS.gene57527.t1 MTR_7g070440 28.460 383 232 14 4 357 1 370 1.17e-20 92.4
MS.gene57527.t1 MTR_2g031640 26.146 371 233 15 10 357 6 358 1.22e-20 92.4
MS.gene57527.t1 MTR_6g004660 28.526 312 183 8 8 294 14 310 1.51e-20 92.0
MS.gene57527.t1 MTR_2g026010 27.273 374 222 17 10 363 4 347 1.86e-20 92.0
MS.gene57527.t1 MTR_3g011100 30.255 314 171 13 10 298 235 525 2.83e-20 92.8
MS.gene57527.t1 MTR_7g007300 26.216 370 225 15 10 358 103 445 3.19e-20 92.0
MS.gene57527.t1 MTR_7g445890 29.032 310 169 15 10 294 16 299 3.42e-20 91.3
MS.gene57527.t1 MTR_4g013180 28.346 381 219 15 5 343 6 374 3.94e-20 91.7
MS.gene57527.t1 MTR_7g028660 29.012 324 177 12 9 298 10 314 4.19e-20 90.9
MS.gene57527.t1 MTR_0097s0030 25.068 367 212 13 10 338 14 355 4.71e-20 90.9
MS.gene57527.t1 MTR_2g047240 25.068 367 212 13 10 338 14 355 4.71e-20 90.9
MS.gene57527.t1 MTR_7g061060 30.794 315 173 12 9 294 12 310 5.19e-20 90.9
MS.gene57527.t1 MTR_1g088120 27.157 394 214 17 1 338 1 377 5.67e-20 90.9
MS.gene57527.t1 MTR_0760s0010 30.556 360 208 17 17 358 54 389 6.43e-20 90.5
MS.gene57527.t1 MTR_2g021210 27.434 339 204 13 10 340 84 388 6.48e-20 90.9
MS.gene57527.t1 MTR_3g010590 29.808 312 170 14 10 304 39 318 6.86e-20 90.5
MS.gene57527.t1 MTR_2g046830 28.213 319 172 13 9 301 24 311 8.23e-20 90.5
MS.gene57527.t1 MTR_4g030760 26.478 389 213 16 10 357 73 429 8.73e-20 90.5
MS.gene57527.t1 MTR_2g425980 26.893 383 233 15 10 357 5 375 8.88e-20 90.1
MS.gene57527.t1 MTR_5g007610 30.255 314 176 13 10 298 41 336 9.01e-20 90.1
MS.gene57527.t1 MTR_0064s0160 26.633 398 232 17 9 362 41 422 9.97e-20 90.5
MS.gene57527.t1 MTR_7g060940 28.457 376 195 17 10 338 22 370 1.00e-19 90.1
MS.gene57527.t1 MTR_2g021050 26.923 364 207 15 10 345 5 337 1.01e-19 89.7
MS.gene57527.t1 MTR_3g010520 28.065 310 172 11 10 304 25 298 1.11e-19 89.4
MS.gene57527.t1 MTR_0464s0020 26.492 419 219 16 13 358 26 428 1.59e-19 89.7
MS.gene57527.t1 MTR_3g030240 28.871 381 196 19 10 358 40 377 1.71e-19 89.0
MS.gene57527.t1 MTR_4g129190 26.769 325 184 12 10 298 6 312 1.73e-19 89.4
MS.gene57527.t1 MTR_7g070880 25.714 420 223 16 10 359 21 421 1.77e-19 89.4
MS.gene57527.t1 MTR_4g023430 66.667 66 18 1 1 62 32 97 1.79e-19 86.3
MS.gene57527.t1 MTR_4g023430 49.425 87 36 3 282 361 132 217 2.31e-16 77.8
MS.gene57527.t1 MTR_1g055375 27.926 376 225 20 13 358 7 366 1.97e-19 89.0
MS.gene57527.t1 MTR_3g030330 26.596 376 225 15 10 358 20 371 2.21e-19 88.6
MS.gene57527.t1 MTR_6g034720 43.697 119 63 3 129 244 53 170 2.56e-19 85.9
MS.gene57527.t1 MTR_2g461450 28.571 301 172 13 10 294 18 291 3.48e-19 88.2
MS.gene57527.t1 MTR_0115s0020 25.309 324 205 12 10 301 10 328 3.79e-19 88.2
MS.gene57527.t1 MTR_2g078900 27.331 311 176 12 10 299 33 314 4.02e-19 87.8
MS.gene57527.t1 MTR_4g019990 25.945 397 238 14 6 357 2 387 4.29e-19 88.2
MS.gene57527.t1 MTR_7g066000 29.032 310 195 11 7 294 22 328 9.92e-19 87.0
MS.gene57527.t1 MTR_7g056390 27.202 386 193 13 13 334 21 382 1.07e-18 87.0
MS.gene57527.t1 MTR_2g028140 25.915 328 193 12 10 298 5 321 1.11e-18 87.0
MS.gene57527.t1 MTR_7g062060 26.633 398 237 17 9 359 11 400 1.73e-18 86.3
MS.gene57527.t1 MTR_7g060960 29.073 313 152 15 10 298 32 298 1.93e-18 85.9
MS.gene57527.t1 MTR_3g007300 28.261 368 195 16 10 358 49 366 2.25e-18 85.9
MS.gene57527.t1 MTR_7g066010 29.010 293 150 11 6 257 17 292 2.61e-18 85.5
MS.gene57527.t1 MTR_8g062660 27.070 314 186 10 10 299 22 316 2.64e-18 86.7
MS.gene57527.t1 MTR_5g046300 28.620 297 179 14 10 294 4 279 2.70e-18 85.5
MS.gene57527.t1 MTR_5g046290 28.620 297 179 14 10 294 4 279 2.70e-18 85.5
MS.gene57527.t1 MTR_4g030110 26.633 398 206 17 1 347 21 383 2.91e-18 85.5
MS.gene57527.t1 MTR_3g010970 26.984 315 158 13 13 299 51 321 3.03e-18 85.5
MS.gene57527.t1 MTR_4g080200 27.374 358 221 17 10 352 3 336 3.17e-18 85.1
MS.gene57527.t1 MTR_2g047200 26.598 391 228 18 10 358 20 393 3.81e-18 85.5
MS.gene57527.t1 MTR_3g010920 27.152 302 174 11 10 299 44 311 5.57e-18 84.7
MS.gene57527.t1 MTR_6g053260 28.840 319 190 15 10 310 337 636 5.67e-18 85.9
MS.gene57527.t1 MTR_2g104280 24.877 406 253 15 1 361 5 403 5.90e-18 84.7
MS.gene57527.t1 MTR_3g058470 27.844 334 173 12 10 318 37 327 7.04e-18 84.3
MS.gene57527.t1 MTR_3g024110 27.424 361 200 19 10 352 101 417 1.06e-17 84.3
MS.gene57527.t1 MTR_0649s0020 29.073 399 211 20 10 358 11 387 1.18e-17 84.0
MS.gene57527.t1 MTR_4g102410 24.433 397 248 13 9 361 60 448 1.23e-17 84.3
MS.gene57527.t1 MTR_7g091630 26.687 326 202 12 3 298 25 343 1.46e-17 84.0
MS.gene57527.t1 MTR_5g096630 24.181 397 254 12 10 361 18 412 1.60e-17 83.6
MS.gene57527.t1 MTR_7g061050 28.528 326 163 11 9 294 12 307 1.70e-17 83.6
MS.gene57527.t1 MTR_3g010430 26.992 389 212 19 10 358 36 392 1.76e-17 83.6
MS.gene57527.t1 MTR_7g067680 28.165 316 153 11 10 299 49 316 1.76e-17 83.6
MS.gene57527.t1 MTR_4g033495 26.781 407 217 17 10 361 27 407 1.80e-17 83.6
MS.gene57527.t1 MTR_7g062100 28.916 332 153 15 10 294 24 319 1.88e-17 83.2
MS.gene57527.t1 MTR_2g024100 27.089 395 223 17 14 363 11 385 2.18e-17 83.2
MS.gene57527.t1 MTR_3g072470 28.079 406 174 20 13 339 22 388 2.39e-17 83.2
MS.gene57527.t1 MTR_7g056820 26.303 403 218 20 4 357 1 373 2.70e-17 82.8
MS.gene57527.t1 MTR_7g056797 26.396 394 237 17 7 358 20 402 2.89e-17 82.8
MS.gene57527.t1 MTR_3g010620 27.397 292 183 10 13 299 39 306 2.95e-17 82.8
MS.gene57527.t1 MTR_0707s0020 25.561 446 213 20 9 360 25 445 3.45e-17 82.8
MS.gene57527.t1 MTR_7g056003 27.692 325 176 10 13 298 18 322 4.09e-17 82.4
MS.gene57527.t1 MTR_2g104340 26.343 391 241 16 9 361 13 394 4.24e-17 82.4
MS.gene57527.t1 MTR_2g021770 27.654 405 225 18 12 361 14 405 4.38e-17 82.4
MS.gene57527.t1 MTR_6g090180 26.065 399 237 14 9 359 46 434 4.52e-17 82.4
MS.gene57527.t1 MTR_1g442850 27.089 395 188 18 9 340 4 361 4.61e-17 82.0
MS.gene57527.t1 MTR_5g046260 27.551 294 156 15 10 294 4 249 4.71e-17 80.9
MS.gene57527.t1 MTR_5g057643 31.197 234 140 11 10 232 46 269 4.94e-17 80.5
MS.gene57527.t1 MTR_4g129160 28.947 342 183 16 4 298 1 329 4.98e-17 81.6
MS.gene57527.t1 MTR_2g043400 28.495 372 189 17 13 328 26 376 5.38e-17 82.0
MS.gene57527.t1 MTR_8g464770 25.714 385 235 14 9 360 11 377 5.57e-17 81.6
MS.gene57527.t1 MTR_7g056290 26.823 384 201 14 13 336 25 388 7.70e-17 81.6
MS.gene57527.t1 MTR_6g092560 25.313 399 237 15 10 360 12 397 8.54e-17 81.6
MS.gene57527.t1 MTR_0242s0060 28.571 329 184 14 9 298 8 324 1.25e-16 80.9
MS.gene57527.t1 MTR_0242s0040 28.571 329 184 14 9 298 8 324 1.25e-16 80.9
MS.gene57527.t1 MTR_4g030090 25.945 397 235 16 10 358 14 399 1.34e-16 80.9
MS.gene57527.t1 MTR_6g048140 30.124 322 161 16 10 299 39 328 1.62e-16 80.5
MS.gene57527.t1 MTR_2g047878 26.632 383 223 16 2 358 13 363 1.80e-16 80.1
MS.gene57527.t1 MTR_3g023940 26.075 372 230 15 10 358 34 383 1.97e-16 80.1
MS.gene57527.t1 MTR_7g056710 28.754 313 174 13 9 294 17 307 2.58e-16 79.7
MS.gene57527.t1 MTR_7g055987 28.662 314 170 14 13 298 23 310 3.05e-16 79.7
MS.gene57527.t1 MTR_4g013175 26.617 402 221 15 1 338 1 392 3.10e-16 80.1
MS.gene57527.t1 MTR_0128s0010 28.125 320 188 13 3 294 14 319 3.66e-16 79.7
MS.gene57527.t1 MTR_5g096710 28.931 318 173 14 10 294 23 320 4.72e-16 79.3
MS.gene57527.t1 MTR_4g030790 28.352 261 126 9 10 251 19 237 4.84e-16 78.6
MS.gene57527.t1 MTR_4g024870 28.947 228 138 7 11 222 45 264 4.87e-16 79.3
MS.gene57527.t1 MTR_2g038680 26.290 407 232 20 10 361 16 409 5.10e-16 79.3
MS.gene57527.t1 MTR_7g055977 25.799 407 225 18 4 359 1 381 6.37e-16 78.6
MS.gene57527.t1 MTR_2g078850 25.627 359 210 14 13 352 33 353 6.92e-16 78.6
MS.gene57527.t1 MTR_5g057040 32.184 174 86 7 10 164 46 206 1.10e-15 79.0
MS.gene57527.t1 MTR_6g017270 30.303 198 119 8 10 191 9 203 1.22e-15 77.4
MS.gene57527.t1 MTR_2g021950 23.514 387 252 14 9 359 15 393 1.35e-15 77.8
MS.gene57527.t1 MTR_3g009250 32.727 220 124 9 10 220 41 245 1.62e-15 75.9
MS.gene57527.t1 MTR_3g011650 31.925 213 130 7 13 220 82 284 1.63e-15 76.3
MS.gene57527.t1 MTR_7g017130 25.460 326 195 15 10 298 18 332 2.00e-15 77.4
MS.gene57527.t1 MTR_7g017170 25.460 326 195 15 10 298 18 332 2.02e-15 77.4
MS.gene57527.t1 MTR_6g086825 25.250 400 248 17 6 361 66 458 2.31e-15 77.4
MS.gene57527.t1 MTR_7g016930 25.846 325 189 11 9 307 15 313 2.33e-15 76.6
MS.gene57527.t1 MTR_3g058480 30.233 258 146 9 10 246 39 283 2.44e-15 76.6
MS.gene57527.t1 MTR_7g056260 28.793 323 169 13 13 298 17 315 2.81e-15 76.3
MS.gene57527.t1 MTR_3g080370 28.040 403 202 18 24 358 35 417 2.87e-15 77.0
MS.gene57527.t1 MTR_1g007410 23.441 401 246 12 1 355 13 398 2.89e-15 77.0
MS.gene57527.t1 MTR_4g070550 27.439 328 182 14 10 298 5 315 3.05e-15 76.6
MS.gene57527.t1 MTR_7g061090 26.061 330 181 12 9 294 21 331 3.17e-15 76.6
MS.gene57527.t1 MTR_3g024130 26.619 278 169 12 98 358 55 314 3.20e-15 75.9
MS.gene57527.t1 MTR_7g078860 28.060 335 188 13 1 298 1 319 3.95e-15 76.3
MS.gene57527.t1 MTR_0831s0010 25.765 392 239 17 3 359 43 417 3.98e-15 76.6
MS.gene57527.t1 MTR_2g426060 26.899 316 187 13 10 294 6 308 4.66e-15 76.3
MS.gene57527.t1 MTR_5g069760 28.451 355 208 15 9 333 5 343 5.02e-15 75.9
MS.gene57527.t1 MTR_6g013270 25.075 335 214 13 5 318 24 342 5.21e-15 76.3
MS.gene57527.t1 MTR_7g078900 28.696 345 187 15 1 298 1 333 6.29e-15 75.9
MS.gene57527.t1 MTR_1g061330 25.131 382 231 17 10 362 4 359 6.32e-15 75.9
MS.gene57527.t1 MTR_7g055930 25.564 399 209 16 13 335 16 402 7.20e-15 75.9
MS.gene57527.t1 MTR_5g037680 24.103 390 241 18 9 358 7 381 7.40e-15 75.9
MS.gene57527.t1 MTR_0267s0050 26.448 397 239 20 4 360 1 384 8.73e-15 75.5
MS.gene57527.t1 MTR_2g021800 23.077 416 251 16 2 359 8 412 8.84e-15 75.5
MS.gene57527.t1 MTR_5g048160 23.620 326 206 10 10 298 4 323 9.62e-15 75.1
MS.gene57527.t1 MTR_1g023400 25.000 372 234 17 10 359 3 351 1.06e-14 74.7
MS.gene57527.t1 MTR_7g052670 26.128 421 230 19 6 358 17 424 1.52e-14 75.1
MS.gene57527.t1 MTR_7g035295 25.871 402 207 19 10 358 16 379 1.64e-14 74.7
MS.gene57527.t1 MTR_5g069930 26.630 368 211 18 6 333 2 350 1.83e-14 74.3
MS.gene57527.t1 MTR_3g437520 25.193 389 222 13 13 341 26 405 2.15e-14 74.7
MS.gene57527.t1 MTR_4g014370 23.399 406 250 16 9 361 10 407 2.66e-14 73.9
MS.gene57527.t1 MTR_5g069390 24.757 412 230 17 9 361 25 415 2.80e-14 74.3
MS.gene57527.t1 MTR_7g078840 27.841 352 191 18 1 298 1 343 2.91e-14 73.9
MS.gene57527.t1 MTR_0627s0010 27.457 346 163 16 10 294 38 356 3.16e-14 73.9
MS.gene57527.t1 MTR_7g057270 27.439 328 184 14 10 298 26 338 3.33e-14 73.9
MS.gene57527.t1 MTR_2g034700 26.724 348 194 19 3 317 8 327 3.74e-14 73.2
MS.gene57527.t1 MTR_0129s0070 24.872 390 237 17 13 362 20 393 4.17e-14 73.6
MS.gene57527.t1 MTR_4g006270 26.351 296 174 11 10 292 4 268 4.33e-14 73.2
MS.gene57527.t1 MTR_5g097350 25.798 376 227 18 19 359 25 383 4.73e-14 73.2
MS.gene57527.t1 MTR_7g017040 25.278 360 211 16 9 325 15 359 6.48e-14 72.8
MS.gene57527.t1 MTR_1g055055 27.778 306 170 13 10 300 26 295 6.54e-14 72.4
MS.gene57527.t1 MTR_3g030310 27.019 359 208 16 10 337 21 356 7.19e-14 72.8
MS.gene57527.t1 MTR_6g055210 26.984 315 194 12 9 293 21 329 7.82e-14 72.8
MS.gene57527.t1 MTR_3g058440 29.796 245 138 8 10 234 35 265 9.07e-14 71.6
MS.gene57527.t1 MTR_7g056737 25.691 362 214 14 6 331 18 360 1.02e-13 72.4
MS.gene57527.t1 MTR_3g013950 26.185 401 237 21 4 360 1 386 1.18e-13 72.0
MS.gene57527.t1 MTR_7g091640 28.261 322 190 17 3 294 28 338 1.27e-13 71.6
MS.gene57527.t1 MTR_2g437110 27.019 322 183 15 10 298 22 324 1.31e-13 72.4
MS.gene57527.t1 MTR_8g066440 26.817 399 222 18 11 359 24 402 1.74e-13 71.6
MS.gene57527.t1 MTR_4g011660 25.816 337 181 14 10 294 19 338 1.77e-13 71.6
MS.gene57527.t1 MTR_7g077990 26.316 323 173 11 10 294 17 312 3.30e-13 70.5
MS.gene57527.t1 MTR_5g027370 23.397 312 201 9 10 294 29 329 3.33e-13 70.9
MS.gene57527.t1 MTR_5g027330 23.642 313 199 10 10 294 40 340 3.78e-13 70.9
MS.gene57527.t1 MTR_3g096250 28.056 360 187 16 10 358 47 345 3.80e-13 70.1
MS.gene57527.t1 MTR_5g043160 25.444 338 189 12 13 298 53 379 6.38e-13 70.1
MS.gene57527.t1 MTR_7g066080 26.769 325 180 14 10 294 16 322 6.58e-13 70.1
MS.gene57527.t1 MTR_7g050520 26.582 316 182 12 7 294 19 312 7.22e-13 69.7
MS.gene57527.t1 MTR_5g008530 65.217 46 16 0 10 55 18 63 8.17e-13 63.5
MS.gene57527.t1 MTR_7g061010 26.503 366 209 14 10 338 22 364 9.00e-13 69.3
MS.gene57527.t1 MTR_7g066850 24.874 398 240 15 10 361 23 407 1.09e-12 69.3
MS.gene57527.t1 MTR_8g101940 27.948 229 135 8 10 222 2 216 1.14e-12 68.9
MS.gene57527.t1 MTR_5g023570 40.541 111 58 3 5 112 32 137 1.15e-12 65.5
MS.gene57527.t1 MTR_7g445750 25.694 288 163 9 6 252 19 296 1.20e-12 68.6
MS.gene57527.t1 MTR_8g033110 23.202 431 237 15 2 361 6 413 1.36e-12 68.9
MS.gene57527.t1 MTR_1g114700 26.984 378 228 17 10 358 29 387 1.56e-12 68.6
MS.gene57527.t1 MTR_1g015740 24.713 348 189 14 10 342 8 297 1.99e-12 67.8
MS.gene57527.t1 MTR_5g056990 29.126 206 120 9 137 331 23 213 2.33e-12 66.6
MS.gene57527.t1 MTR_3g010870 27.753 227 119 9 10 216 37 238 3.03e-12 67.0
MS.gene57527.t1 MTR_7g050480 28.527 319 172 15 7 294 19 312 3.22e-12 67.8
MS.gene57527.t1 MTR_8g064890 25.617 324 184 14 9 294 15 319 3.44e-12 67.4
MS.gene57527.t1 MTR_1g009110 26.630 368 225 18 2 342 7 356 3.55e-12 67.4
MS.gene57527.t1 MTR_1g112010 25.574 305 186 10 32 318 2 283 4.42e-12 66.6
MS.gene57527.t1 MTR_5g092850 24.317 366 204 17 9 318 15 363 5.11e-12 67.0
MS.gene57527.t1 MTR_7g056200 25.284 352 183 15 9 318 22 335 5.24e-12 67.0
MS.gene57527.t1 MTR_5g097330 23.881 402 252 17 2 359 8 399 5.55e-12 67.0
MS.gene57527.t1 MTR_6g034830 37.736 106 56 2 7 112 17 112 6.38e-12 62.4
MS.gene57527.t1 MTR_7g022600 29.614 233 132 10 13 218 26 253 1.12e-11 66.2
MS.gene57527.t1 MTR_7g056170 26.786 392 172 19 1 318 66 416 1.50e-11 65.9
MS.gene57527.t1 MTR_1g097370 28.261 184 111 9 149 318 135 311 1.85e-11 65.5
MS.gene57527.t1 MTR_8g467670 24.865 370 229 14 2 337 7 361 1.93e-11 65.1
MS.gene57527.t1 MTR_3g010440 26.638 229 142 7 10 223 26 243 2.34e-11 64.7
MS.gene57527.t1 MTR_7g050490 30.244 205 101 7 7 190 5 188 3.39e-11 62.0
MS.gene57527.t1 MTR_1g055145 43.956 91 42 3 20 104 43 130 3.71e-11 63.5
MS.gene57527.t1 MTR_6g017295 28.631 241 145 11 78 298 19 252 3.80e-11 64.7
MS.gene57527.t1 MTR_7g052150 29.268 328 163 18 10 298 22 319 3.85e-11 64.3
MS.gene57527.t1 MTR_7g009265 24.534 322 192 13 84 359 8 324 3.99e-11 63.9
MS.gene57527.t1 MTR_3g007390 27.841 176 111 7 147 318 1 164 5.07e-11 62.0
MS.gene57527.t1 MTR_7g056570 26.984 315 178 13 9 294 17 308 6.46e-11 63.9
MS.gene57527.t1 MTR_3g009290 27.468 233 139 9 10 231 35 248 6.67e-11 62.4
MS.gene57527.t1 MTR_1g029650 26.250 320 190 13 10 298 8 312 7.00e-11 63.5
MS.gene57527.t1 MTR_1g047490 25.817 306 165 12 9 286 21 292 7.64e-11 62.8
MS.gene57527.t1 MTR_7g022670 26.403 303 151 12 10 294 23 271 8.09e-11 63.2
MS.gene57527.t1 MTR_4g006840 27.477 222 115 7 13 223 2 188 8.56e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57527.t1 AT3G06240 27.407 405 214 18 7 346 33 422 1.99e-25 106
MS.gene57527.t1 AT3G23880 29.836 305 183 11 10 299 14 302 7.61e-24 101
MS.gene57527.t1 AT3G16210 27.922 308 170 13 9 302 4 273 4.29e-22 96.3
MS.gene57527.t1 AT4G12560 28.707 317 181 13 10 298 4 303 1.17e-19 90.1
MS.gene57527.t1 AT4G12560 28.707 317 181 13 10 298 4 303 1.17e-19 90.1
MS.gene57527.t1 AT4G12560 28.707 317 181 13 10 298 4 303 1.17e-19 90.1
MS.gene57527.t1 AT2G40925 25.949 316 185 13 10 298 27 320 1.91e-16 80.5
MS.gene57527.t1 AT3G10430 30.876 217 125 9 10 216 5 206 2.86e-15 76.6
MS.gene57527.t1 AT4G21240 23.344 317 211 9 10 313 36 333 9.48e-14 72.4
MS.gene57527.t1 AT1G13200 23.601 411 232 16 10 358 43 433 9.77e-14 72.4
MS.gene57527.t1 AT4G04690 27.119 236 139 10 10 235 11 223 3.05e-13 70.9
MS.gene57527.t1 AT5G62510 26.996 263 142 10 10 244 44 284 1.09e-12 69.3
MS.gene57527.t1 AT1G47790 26.639 244 162 6 7 245 22 253 1.85e-12 68.6
MS.gene57527.t1 AT3G16590 24.638 345 211 15 10 328 5 326 2.37e-12 68.2
MS.gene57527.t1 AT1G32420 24.916 297 175 10 10 290 37 301 2.46e-12 67.4
MS.gene57527.t1 AT3G08750 28.099 242 142 12 10 242 12 230 3.08e-12 67.8
MS.gene57527.t1 AT2G43270 25.221 226 135 6 8 219 2 207 5.27e-12 65.1
MS.gene57527.t1 AT1G12855 23.227 409 235 17 10 358 71 460 1.16e-11 66.2
MS.gene57527.t1 AT4G19940 23.615 343 208 14 10 318 35 357 1.82e-11 65.5
MS.gene57527.t1 AT3G22650 25.325 308 181 13 10 294 9 290 6.20e-11 63.5
MS.gene57527.t1 AT2G40910 22.961 331 231 10 7 318 59 384 6.31e-11 63.9
MS.gene57527.t1 AT1G47390 26.042 288 189 10 10 291 7 276 6.65e-11 63.5
MS.gene57527.t1 AT1G50870 26.210 248 164 6 6 245 27 263 6.95e-11 63.5
MS.gene57527.t1 AT2G40910 22.961 331 231 10 7 318 66 391 7.26e-11 63.5

Find 74 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCATGATCCTGTGTATTA+TGG 0.220847 8.3:-62037918 MS.gene57527:CDS
TATTATGGTTTGTGGGTATT+TGG 0.243259 8.3:-62037903 MS.gene57527:CDS
CATTATCATCTATATGGTTT+TGG 0.263227 8.3:-62038233 MS.gene57527:CDS
TACTATCATTATCATCTATA+TGG 0.275465 8.3:-62038239 MS.gene57527:CDS
ATTATTGGAACTAGTAATAT+TGG 0.276981 8.3:-62037714 MS.gene57527:CDS
TATTGTTGTCTTTGATTTAA+CGG 0.293284 8.3:-62037979 MS.gene57527:CDS
TTGGAGAATTTCTTAGTCTA+TGG 0.301949 8.3:-62037884 MS.gene57527:CDS
AAAGCAGGATCATTGTTTAA+TGG 0.318854 8.3:-62038050 MS.gene57527:CDS
AAGCAGGATCATTGTTTAAT+GGG 0.319996 8.3:-62038049 MS.gene57527:CDS
ATTGTCGGACAGTTGAAATA+TGG 0.329403 8.3:-62037842 MS.gene57527:CDS
ATGGCCACTTCCAATGCATT+TGG 0.356843 8.3:+62037633 None:intergenic
CTTGTAATTCCTATTGATGC+TGG 0.360313 8.3:-62037777 MS.gene57527:CDS
TCAAATCCTGCTGAGGTTGC+CGG 0.380355 8.3:-62038615 MS.gene57527:CDS
TGTTTAATGGGGCTATTCAT+TGG 0.384357 8.3:-62038037 MS.gene57527:CDS
GGAACATGATTGTGTTTCAA+TGG 0.399812 8.3:-62038426 MS.gene57527:CDS
AAGTAAAGCCCAGCATCAAT+AGG 0.431025 8.3:+62037768 None:intergenic
TTGTAATTCCTATTGATGCT+GGG 0.431560 8.3:-62037776 MS.gene57527:CDS
ATCCTGTGTATTATGGTTTG+TGG 0.433603 8.3:-62037911 MS.gene57527:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.434682 8.3:-62037603 MS.gene57527:CDS
TCTCTTTGAGAGATAATAAG+TGG 0.449844 8.3:-62038124 MS.gene57527:CDS
ACTGTTAGAGATACCTCTTC+CGG 0.452548 8.3:-62037949 MS.gene57527:CDS
GCTCGTAATTTCAAAGCAAA+AGG 0.455785 8.3:+62038263 None:intergenic
CCGGTTAAGAGATGATTACT+TGG 0.461057 8.3:-62038204 MS.gene57527:CDS
TCCTGTGTATTATGGTTTGT+GGG 0.474803 8.3:-62037910 MS.gene57527:CDS
CCAAGTAATCATCTCTTAAC+CGG 0.475089 8.3:+62038204 None:intergenic
CGAAATGAATCCAAATGCAT+TGG 0.475555 8.3:-62037643 MS.gene57527:CDS
TCAAGAACTCCAACTCCTGT+TGG 0.481077 8.3:-62038479 MS.gene57527:CDS
TCAAATGCGTTTGTAAGTCA+TGG 0.482109 8.3:-62038574 MS.gene57527:CDS
TCTATAGAGCGAATTCCAAC+AGG 0.488269 8.3:+62038464 None:intergenic
TTGGTGAAGTATAATAATAA+AGG 0.488795 8.3:-62037684 MS.gene57527:CDS
GGATCATGGTTAAAATCATC+CGG 0.492599 8.3:+62037930 None:intergenic
AGTTGAAATATGGGTGATGA+AGG 0.495178 8.3:-62037832 MS.gene57527:CDS
TTGTCGGACAGTTGAAATAT+GGG 0.496437 8.3:-62037841 MS.gene57527:CDS
ACTTCACCGGCAACCTCAGC+AGG 0.499391 8.3:+62038609 None:intergenic
GAGCGAATTCCAACAGGAGT+TGG 0.502563 8.3:+62038470 None:intergenic
GTTCAACAAACCTATGCGTA+TGG 0.513522 8.3:-62038325 MS.gene57527:CDS
GGAAGTTTCATAAATATTGT+CGG 0.513748 8.3:-62037857 MS.gene57527:CDS
AATACAAACAAAATTCGTCT+TGG 0.515801 8.3:-62037809 MS.gene57527:CDS
GTCGGGGAAGGAGAAAAGTA+TGG 0.523871 8.3:+62038402 None:intergenic
GCCACGGCTTATCGCAAAGC+AGG 0.524609 8.3:-62038065 MS.gene57527:CDS
GGAACTAGTAATATTGGTCG+TGG 0.532601 8.3:-62037708 MS.gene57527:CDS
AAATTTGATCATGGTCCACC+AGG 0.534299 8.3:+62037585 None:intergenic
AGACAAAACTTCATCACGGT+TGG 0.541238 8.3:-62038153 MS.gene57527:CDS
GAATCCAAATGCATTGGAAG+TGG 0.544695 8.3:-62037637 MS.gene57527:CDS
AAATAAAAGGTTCATGCAGA+GGG 0.546459 8.3:-62038364 MS.gene57527:CDS
AACCATAATACACAGGATCA+TGG 0.548106 8.3:+62037916 None:intergenic
GTTAAGAGATGATTACTTGG+TGG 0.548439 8.3:-62038201 MS.gene57527:CDS
TCTTTGTGAAACCTAGAGGA+TGG 0.550094 8.3:+62038299 None:intergenic
AATAAGTGGAATGAAATTGA+AGG 0.554610 8.3:-62038110 MS.gene57527:CDS
TAGTAATATTGGTCGTGGAT+TGG 0.554924 8.3:-62037703 MS.gene57527:CDS
ATTTGAATGAGTAATTCAGC+TGG 0.557046 8.3:+62038632 None:intergenic
TTGTCTTTGATTTAACGGAA+AGG 0.557294 8.3:-62037974 MS.gene57527:CDS
AATTTCTTAGTCTATGGAGT+AGG 0.561569 8.3:-62037878 MS.gene57527:CDS
AAGCAGAGACTCTGTATACA+TGG 0.569558 8.3:+62037614 None:intergenic
GCGTATGGAATCCATCCTCT+AGG 0.573225 8.3:-62038310 MS.gene57527:CDS
TGGTTAAAATCATCCGGAAG+AGG 0.573708 8.3:+62037936 None:intergenic
AAACATAAAAGAGACTTCAC+CGG 0.574747 8.3:+62038596 None:intergenic
TTTGTCTAAGGTTGGACGAG+AGG 0.578839 8.3:+62038169 None:intergenic
CATCACTTATTTGAATGCCA+CGG 0.582461 8.3:-62038081 MS.gene57527:CDS
TACTCATTCAAATCCTGCTG+AGG 0.585371 8.3:-62038622 MS.gene57527:CDS
GAAATAAAAGGTTCATGCAG+AGG 0.596320 8.3:-62038365 MS.gene57527:CDS
TATTTCTTTGTGAAACCTAG+AGG 0.608972 8.3:+62038295 None:intergenic
AGCAGGATCATTGTTTAATG+GGG 0.610231 8.3:-62038048 MS.gene57527:CDS
AGGATGGATTCCATACGCAT+AGG 0.612376 8.3:+62038315 None:intergenic
TATTAACACAATTCTTGCTG+CGG 0.615618 8.3:+62038502 None:intergenic
TCCTGCTTTGCGATAAGCCG+TGG 0.619739 8.3:+62038064 None:intergenic
TCTCTGCTTTCACTCCCTGG+TGG 0.631108 8.3:-62037600 MS.gene57527:CDS
TGAAACACAATCATGTTCCG+TGG 0.635614 8.3:+62038430 None:intergenic
ACCCACAAACCATAATACAC+AGG 0.646047 8.3:+62037909 None:intergenic
AATTTGATCATGGTCCACCA+GGG 0.660460 8.3:+62037586 None:intergenic
TCGTTATTATAATATACGAG+TGG 0.662314 8.3:-62038006 MS.gene57527:CDS
ACATGCGAATTTGCAAAGTG+AGG 0.671122 8.3:+62038533 None:intergenic
CCTTAGACAAAACTTCATCA+CGG 0.672034 8.3:-62038157 MS.gene57527:CDS
GCATTCAAATAAGTGATGTG+AGG 0.690327 8.3:+62038086 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTTTTATGAAATAAA+AGG - chr8.3:62037878-62037897 MS.gene57527:CDS 10.0%
!! ATTATTGGAACTAGTAATAT+TGG - chr8.3:62038541-62038560 MS.gene57527:CDS 20.0%
!! TACTATCATTATCATCTATA+TGG - chr8.3:62038016-62038035 MS.gene57527:CDS 20.0%
!! TTGGTGAAGTATAATAATAA+AGG - chr8.3:62038571-62038590 MS.gene57527:CDS 20.0%
!! TTTCATAAAAAAAATCACGT+CGG + chr8.3:62037874-62037893 None:intergenic 20.0%
!!! TATTGTTGTCTTTGATTTAA+CGG - chr8.3:62038276-62038295 MS.gene57527:CDS 20.0%
! AATAAGTGGAATGAAATTGA+AGG - chr8.3:62038145-62038164 MS.gene57527:CDS 25.0%
! AATACAAACAAAATTCGTCT+TGG - chr8.3:62038446-62038465 MS.gene57527:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG - chr8.3:62038526-62038545 MS.gene57527:CDS 25.0%
! GGAAGTTTCATAAATATTGT+CGG - chr8.3:62038398-62038417 MS.gene57527:CDS 25.0%
! TCGTTATTATAATATACGAG+TGG - chr8.3:62038249-62038268 MS.gene57527:CDS 25.0%
! TTCATAAAAAAAATCACGTC+GGG + chr8.3:62037873-62037892 None:intergenic 25.0%
!! ACTTTTTGTAGAGTATATAG+GGG + chr8.3:62038515-62038534 None:intergenic 25.0%
!! CATTATCATCTATATGGTTT+TGG - chr8.3:62038022-62038041 MS.gene57527:CDS 25.0%
!!! CACTTTTTGTAGAGTATATA+GGG + chr8.3:62038516-62038535 None:intergenic 25.0%
!!! TATAGATTTTGAAACATCCA+CGG - chr8.3:62037808-62037827 MS.gene57527:CDS 25.0%
AAACATAAAAGAGACTTCAC+CGG + chr8.3:62037662-62037681 None:intergenic 30.0%
AAAGCAGGATCATTGTTTAA+TGG - chr8.3:62038205-62038224 MS.gene57527:CDS 30.0%
AAATAAAAGGTTCATGCAGA+GGG - chr8.3:62037891-62037910 MS.gene57527:CDS 30.0%
AAGCAGGATCATTGTTTAAT+GGG - chr8.3:62038206-62038225 MS.gene57527:CDS 30.0%
AATTTCTTAGTCTATGGAGT+AGG - chr8.3:62038377-62038396 MS.gene57527:CDS 30.0%
ATTTGAATGAGTAATTCAGC+TGG + chr8.3:62037626-62037645 None:intergenic 30.0%
CCTATATACTCTACAAAAAG+TGG - chr8.3:62038514-62038533 MS.gene57527:CDS 30.0%
TATTAACACAATTCTTGCTG+CGG + chr8.3:62037756-62037775 None:intergenic 30.0%
TATTTCTTTGTGAAACCTAG+AGG + chr8.3:62037963-62037982 None:intergenic 30.0%
TCATAAAAAAAATCACGTCG+GGG + chr8.3:62037872-62037891 None:intergenic 30.0%
TTGGAGAATTTCTTAGTCTA+TGG - chr8.3:62038371-62038390 MS.gene57527:CDS 30.0%
TTGTAATTCCTATTGATGCT+GGG - chr8.3:62038479-62038498 MS.gene57527:CDS 30.0%
! TATTATGGTTTGTGGGTATT+TGG - chr8.3:62038352-62038371 MS.gene57527:CDS 30.0%
! TCTCTTTGAGAGATAATAAG+TGG - chr8.3:62038131-62038150 MS.gene57527:CDS 30.0%
! TTGTCTTTGATTTAACGGAA+AGG - chr8.3:62038281-62038300 MS.gene57527:CDS 30.0%
!!! CCACTTTTTGTAGAGTATAT+AGG + chr8.3:62038517-62038536 None:intergenic 30.0%
!!! TATATGGTTTTGGTTATGAC+CGG - chr8.3:62038032-62038051 MS.gene57527:CDS 30.0%
AACCATAATACACAGGATCA+TGG + chr8.3:62038342-62038361 None:intergenic 35.0%
AACCATGATCCTGTGTATTA+TGG - chr8.3:62038337-62038356 MS.gene57527:CDS 35.0%
AGCAGGATCATTGTTTAATG+GGG - chr8.3:62038207-62038226 MS.gene57527:CDS 35.0%
AGTTGAAATATGGGTGATGA+AGG - chr8.3:62038423-62038442 MS.gene57527:CDS 35.0%
ATCCTGTGTATTATGGTTTG+TGG - chr8.3:62038344-62038363 MS.gene57527:CDS 35.0%
ATTGTCGGACAGTTGAAATA+TGG - chr8.3:62038413-62038432 MS.gene57527:CDS 35.0%
CATCACTTATTTGAATGCCA+CGG - chr8.3:62038174-62038193 MS.gene57527:CDS 35.0%
CCAAGTAATCATCTCTTAAC+CGG + chr8.3:62038054-62038073 None:intergenic 35.0%
CCTTAGACAAAACTTCATCA+CGG - chr8.3:62038098-62038117 MS.gene57527:CDS 35.0%
CGAAATGAATCCAAATGCAT+TGG - chr8.3:62038612-62038631 MS.gene57527:CDS 35.0%
CTTGTAATTCCTATTGATGC+TGG - chr8.3:62038478-62038497 MS.gene57527:CDS 35.0%
GAAATAAAAGGTTCATGCAG+AGG - chr8.3:62037890-62037909 MS.gene57527:CDS 35.0%
GCATTCAAATAAGTGATGTG+AGG + chr8.3:62038172-62038191 None:intergenic 35.0%
GCTCGTAATTTCAAAGCAAA+AGG + chr8.3:62037995-62038014 None:intergenic 35.0%
GGAACATGATTGTGTTTCAA+TGG - chr8.3:62037829-62037848 MS.gene57527:CDS 35.0%
GGATCATGGTTAAAATCATC+CGG + chr8.3:62038328-62038347 None:intergenic 35.0%
GTTAAGAGATGATTACTTGG+TGG - chr8.3:62038054-62038073 MS.gene57527:CDS 35.0%
TAGTAATATTGGTCGTGGAT+TGG - chr8.3:62038552-62038571 MS.gene57527:CDS 35.0%
TCAAATGCGTTTGTAAGTCA+TGG - chr8.3:62037681-62037700 MS.gene57527:CDS 35.0%
TGTTTAATGGGGCTATTCAT+TGG - chr8.3:62038218-62038237 MS.gene57527:CDS 35.0%
TTGTCGGACAGTTGAAATAT+GGG - chr8.3:62038414-62038433 MS.gene57527:CDS 35.0%
! TCCTGTGTATTATGGTTTGT+GGG - chr8.3:62038345-62038364 MS.gene57527:CDS 35.0%
!! GATGAAGTTTTGTCTAAGGT+TGG + chr8.3:62038097-62038116 None:intergenic 35.0%
AAAAAAAATCACGTCGGGGA+AGG + chr8.3:62037868-62037887 None:intergenic 40.0%
AAGCAGAGACTCTGTATACA+TGG + chr8.3:62038644-62038663 None:intergenic 40.0%
AAGTAAAGCCCAGCATCAAT+AGG + chr8.3:62038490-62038509 None:intergenic 40.0%
ACATGCGAATTTGCAAAGTG+AGG + chr8.3:62037725-62037744 None:intergenic 40.0%
ACCCACAAACCATAATACAC+AGG + chr8.3:62038349-62038368 None:intergenic 40.0%
ACTGTTAGAGATACCTCTTC+CGG - chr8.3:62038306-62038325 MS.gene57527:CDS 40.0%
AGACAAAACTTCATCACGGT+TGG - chr8.3:62038102-62038121 MS.gene57527:CDS 40.0%
CCGGTTAAGAGATGATTACT+TGG - chr8.3:62038051-62038070 MS.gene57527:CDS 40.0%
GAATCCAAATGCATTGGAAG+TGG - chr8.3:62038618-62038637 MS.gene57527:CDS 40.0%
GGAACTAGTAATATTGGTCG+TGG - chr8.3:62038547-62038566 MS.gene57527:CDS 40.0%
GTTCAACAAACCTATGCGTA+TGG - chr8.3:62037930-62037949 MS.gene57527:CDS 40.0%
TACTCATTCAAATCCTGCTG+AGG - chr8.3:62037633-62037652 MS.gene57527:CDS 40.0%
TCTATAGAGCGAATTCCAAC+AGG + chr8.3:62037794-62037813 None:intergenic 40.0%
TCTTTGTGAAACCTAGAGGA+TGG + chr8.3:62037959-62037978 None:intergenic 40.0%
TGAAACACAATCATGTTCCG+TGG + chr8.3:62037828-62037847 None:intergenic 40.0%
TGGTTAAAATCATCCGGAAG+AGG + chr8.3:62038322-62038341 None:intergenic 40.0%
!! CCGTGATGAAGTTTTGTCTA+AGG + chr8.3:62038101-62038120 None:intergenic 40.0%
ATGGCCACTTCCAATGCATT+TGG + chr8.3:62038625-62038644 None:intergenic 45.0%
TCAAGAACTCCAACTCCTGT+TGG - chr8.3:62037776-62037795 MS.gene57527:CDS 45.0%
! AGGATGGATTCCATACGCAT+AGG + chr8.3:62037943-62037962 None:intergenic 45.0%
! TTTGTCTAAGGTTGGACGAG+AGG + chr8.3:62038089-62038108 None:intergenic 45.0%
GAGCGAATTCCAACAGGAGT+TGG + chr8.3:62037788-62037807 None:intergenic 50.0%
GCGTATGGAATCCATCCTCT+AGG - chr8.3:62037945-62037964 MS.gene57527:CDS 50.0%
GTCGGGGAAGGAGAAAAGTA+TGG + chr8.3:62037856-62037875 None:intergenic 50.0%
TCAAATCCTGCTGAGGTTGC+CGG - chr8.3:62037640-62037659 MS.gene57527:CDS 50.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr8.3:62038652-62038671 MS.gene57527:CDS 55.0%
TCCTGCTTTGCGATAAGCCG+TGG + chr8.3:62038194-62038213 None:intergenic 55.0%
TCTCTGCTTTCACTCCCTGG+TGG - chr8.3:62038655-62038674 MS.gene57527:CDS 55.0%
ACTTCACCGGCAACCTCAGC+AGG + chr8.3:62037649-62037668 None:intergenic 60.0%
GCCACGGCTTATCGCAAAGC+AGG - chr8.3:62038190-62038209 MS.gene57527:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 62037593 62038684 62037593 ID=MS.gene57527
chr8.3 mRNA 62037593 62038684 62037593 ID=MS.gene57527.t1;Parent=MS.gene57527
chr8.3 exon 62037593 62038684 62037593 ID=MS.gene57527.t1.exon1;Parent=MS.gene57527.t1
chr8.3 CDS 62037593 62038684 62037593 ID=cds.MS.gene57527.t1;Parent=MS.gene57527.t1
Gene Sequence

>MS.gene57527

ATGGCGAAGATGAATGCAACGTTCTATCTTCCAGCTGAATTACTCATTCAAATCCTGCTGAGGTTGCCGGTGAAGTCTCTTTTATGTTTCAAATGCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATCCTCACTTTGCAAATTCGCATGTTGATGTTTCCGCAGCAAGAATTGTGTTAATATCAAGAACTCCAACTCCTGTTGGAATTCGCTCTATAGATTTTGAAACATCCACGGAACATGATTGTGTTTCAATGGACCATACTTTTCTCCTTCCCCGACGTGATTTTTTTTATGAAATAAAAGGTTCATGCAGAGGGCTTATAATTTTGCACTGTTCAACAAACCTATGCGTATGGAATCCATCCTCTAGGTTTCACAAAGAAATATCTTTGTCTCCTTTTGCTTTGAAATTACGAGCATACTATCATTATCATCTATATGGTTTTGGTTATGACCGGTTAAGAGATGATTACTTGGTGGTTTTATTGTCCTCTCGTCCAACCTTAGACAAAACTTCATCACGGTTGGAGTTTTTCTCTTTGAGAGATAATAAGTGGAATGAAATTGAAGGTCCTCACATCACTTATTTGAATGCCACGGCTTATCGCAAAGCAGGATCATTGTTTAATGGGGCTATTCATTGGTTTGCTTCTCGTTATTATAATATACGAGTGGAAGTTATTGTTGTCTTTGATTTAACGGAAAGGAAACTGTTAGAGATACCTCTTCCGGATGATTTTAACCATGATCCTGTGTATTATGGTTTGTGGGTATTTGGAGAATTTCTTAGTCTATGGAGTAGGAAGTTTCATAAATATTGTCGGACAGTTGAAATATGGGTGATGAAGGAATACAAACAAAATTCGTCTTGGACTAAGTCTCTTGTAATTCCTATTGATGCTGGGCTTTACTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTATTGGAACTAGTAATATTGGTCGTGGATTGGTGAAGTATAATAATAAAGGACAGCTGTTAGAGTATCTCGAAATGAATCCAAATGCATTGGAAGTGGCCATGTATACAGAGTCTCTGCTTTCACTCCCTGGTGGACCATGA

Protein sequence

>MS.gene57527.t1

MAKMNATFYLPAELLIQILLRLPVKSLLCFKCVCKSWFSLISDPHFANSHVDVSAARIVLISRTPTPVGIRSIDFETSTEHDCVSMDHTFLLPRRDFFYEIKGSCRGLIILHCSTNLCVWNPSSRFHKEISLSPFALKLRAYYHYHLYGFGYDRLRDDYLVVLLSSRPTLDKTSSRLEFFSLRDNKWNEIEGPHITYLNATAYRKAGSLFNGAIHWFASRYYNIRVEVIVVFDLTERKLLEIPLPDDFNHDPVYYGLWVFGEFLSLWSRKFHKYCRTVEIWVMKEYKQNSSWTKSLVIPIDAGLYFSPIYSTKSGDIIGTSNIGRGLVKYNNKGQLLEYLEMNPNALEVAMYTESLLSLPGGP