AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87573


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87573.t1 MTR_4g023150 87.158 366 39 1 1 366 1 358 0.0 618
MS.gene87573.t1 MTR_4g023190 86.066 366 42 1 1 366 1 357 0.0 610
MS.gene87573.t1 MTR_4g023200 85.519 366 45 1 1 366 1 358 0.0 598
MS.gene87573.t1 MTR_4g023080 63.562 365 118 6 3 366 2 352 1.38e-154 439
MS.gene87573.t1 MTR_4g021785 63.488 367 116 6 3 366 2 353 1.67e-153 436
MS.gene87573.t1 MTR_4g023090 60.000 385 124 8 2 366 8 382 2.36e-149 427
MS.gene87573.t1 MTR_4g023120 57.825 377 128 6 10 366 3 368 2.15e-141 406
MS.gene87573.t1 MTR_4g023070 57.560 377 129 6 10 366 3 368 6.16e-141 405
MS.gene87573.t1 MTR_4g023380 56.997 393 118 10 2 366 8 377 1.47e-133 386
MS.gene87573.t1 MTR_4g023130 56.164 365 104 7 3 366 2 311 4.67e-127 367
MS.gene87573.t1 MTR_4g023440 55.200 375 106 10 2 366 8 330 1.13e-121 354
MS.gene87573.t1 MTR_3g103020 54.692 373 141 11 8 366 18 376 1.54e-121 356
MS.gene87573.t1 MTR_3g034180 53.525 383 148 10 3 366 116 487 5.88e-121 358
MS.gene87573.t1 MTR_3g034160 52.756 381 152 11 3 365 2 372 1.73e-113 335
MS.gene87573.t1 MTR_4g094365 51.852 378 154 11 1 366 1 362 2.88e-111 329
MS.gene87573.t1 MTR_4g109270 53.050 377 151 11 1 366 1 362 5.71e-111 328
MS.gene87573.t1 MTR_4g116330 52.255 377 153 10 2 365 15 377 4.03e-110 327
MS.gene87573.t1 MTR_3g034130 52.459 366 141 11 3 348 2 354 2.36e-108 322
MS.gene87573.t1 MTR_4g122850 52.473 364 142 14 21 366 12 362 2.45e-108 322
MS.gene87573.t1 MTR_4g117770 51.862 376 160 10 1 366 1 365 1.65e-107 320
MS.gene87573.t1 MTR_4g117810 51.862 376 160 10 1 366 1 365 1.65e-107 320
MS.gene87573.t1 MTR_4g109280 51.220 369 151 10 9 366 7 357 9.45e-106 315
MS.gene87573.t1 MTR_5g070130 49.337 377 169 12 4 365 5 374 7.68e-101 303
MS.gene87573.t1 MTR_4g117850 50.670 373 150 13 9 365 22 376 3.37e-100 301
MS.gene87573.t1 MTR_4g117780 50.266 376 166 11 1 366 1 365 1.79e-99 299
MS.gene87573.t1 MTR_8g433040 49.211 380 153 12 1 366 9 362 1.25e-98 297
MS.gene87573.t1 MTR_8g032380 49.211 380 153 12 1 366 9 362 1.25e-98 297
MS.gene87573.t1 MTR_5g070088 45.038 393 174 10 5 366 2 383 4.94e-98 296
MS.gene87573.t1 MTR_6g060650 51.554 386 148 14 4 366 2 371 6.15e-97 293
MS.gene87573.t1 MTR_5g097210 49.211 380 153 13 3 364 2 359 2.50e-95 289
MS.gene87573.t1 MTR_5g070080 45.178 394 175 11 1 365 1 382 7.48e-93 283
MS.gene87573.t1 MTR_1g055135 46.561 378 166 13 9 366 12 373 2.21e-92 281
MS.gene87573.t1 MTR_8g032390 46.011 376 154 10 1 363 31 370 4.55e-91 278
MS.gene87573.t1 MTR_4g117750 50.928 377 143 14 8 364 1 355 1.05e-90 281
MS.gene87573.t1 MTR_4g117750 51.786 112 48 4 258 366 373 481 8.23e-24 102
MS.gene87573.t1 MTR_4g118380 49.459 370 143 12 4 343 2 357 1.82e-90 276
MS.gene87573.t1 MTR_4g116330 46.950 377 134 10 2 365 15 338 5.57e-90 274
MS.gene87573.t1 MTR_4g117720 45.573 384 140 13 1 365 42 375 2.91e-87 268
MS.gene87573.t1 MTR_8g433030 43.164 373 136 9 1 363 31 337 1.42e-80 250
MS.gene87573.t1 MTR_1g055165 42.627 373 150 11 1 366 1 316 2.11e-79 246
MS.gene87573.t1 MTR_8g013010 50.943 265 106 6 8 261 52 303 1.64e-76 239
MS.gene87573.t1 MTR_4g121580 43.947 380 150 18 1 358 1 339 2.21e-68 220
MS.gene87573.t1 MTR_4g117870 43.522 301 113 9 74 364 10 263 4.69e-66 210
MS.gene87573.t1 MTR_1g055195 45.848 277 136 7 92 365 210 475 1.78e-65 215
MS.gene87573.t1 MTR_4g116320 53.744 227 78 7 152 365 43 255 1.82e-64 206
MS.gene87573.t1 MTR_4g118400 38.630 365 146 15 4 362 2 294 6.98e-59 192
MS.gene87573.t1 MTR_2g048580 38.147 367 189 15 4 363 2 337 4.13e-56 187
MS.gene87573.t1 MTR_7g079370 41.714 350 163 17 39 362 16 350 4.72e-54 182
MS.gene87573.t1 MTR_7g117720 50.472 212 69 7 1 197 1 191 2.55e-51 172
MS.gene87573.t1 MTR_7g117720 44.348 115 57 3 253 362 159 271 1.01e-16 79.7
MS.gene87573.t1 MTR_4g118370 45.136 257 96 12 121 365 34 257 1.12e-50 170
MS.gene87573.t1 MTR_7g079400 41.034 290 142 11 93 366 59 335 6.58e-50 171
MS.gene87573.t1 MTR_8g040935 47.867 211 94 6 162 366 6 206 5.42e-49 164
MS.gene87573.t1 MTR_4g116340 45.492 244 95 7 3 231 27 247 5.51e-49 166
MS.gene87573.t1 MTR_6g463430 50.244 205 82 7 166 366 12 200 5.24e-48 161
MS.gene87573.t1 MTR_8g102520 35.263 380 172 15 1 366 1 320 8.35e-45 157
MS.gene87573.t1 MTR_4g117530 41.296 247 98 7 125 366 47 251 1.29e-40 144
MS.gene87573.t1 MTR_1g055175 42.654 211 105 9 160 366 1 199 8.87e-39 137
MS.gene87573.t1 MTR_4g114700 37.079 267 96 8 108 359 9 218 1.63e-38 138
MS.gene87573.t1 MTR_4g117430 53.061 147 59 4 121 267 16 152 3.43e-38 134
MS.gene87573.t1 MTR_1g055250 38.889 216 114 8 147 355 49 253 3.41e-37 137
MS.gene87573.t1 MTR_5g022420 30.484 351 191 17 9 336 26 346 1.88e-34 130
MS.gene87573.t1 MTR_1g097490 32.708 373 204 17 7 360 46 390 7.99e-34 129
MS.gene87573.t1 MTR_1g097560 30.707 368 214 14 7 360 33 373 7.01e-33 126
MS.gene87573.t1 MTR_4g023430 67.391 92 30 0 1 92 32 123 3.68e-32 120
MS.gene87573.t1 MTR_4g023430 46.341 123 44 5 252 366 112 220 1.66e-19 86.7
MS.gene87573.t1 MTR_7g079420 36.531 271 120 10 107 362 905 1138 3.95e-32 128
MS.gene87573.t1 MTR_1g097330 32.194 351 192 16 10 338 16 342 4.82e-32 125
MS.gene87573.t1 MTR_8g101580 29.155 367 227 12 10 360 45 394 5.78e-32 124
MS.gene87573.t1 MTR_2g055970 27.586 377 234 12 3 360 204 560 8.37e-32 126
MS.gene87573.t1 MTR_2g047832 29.775 356 211 15 9 334 28 374 2.40e-30 120
MS.gene87573.t1 MTR_3g013740 30.000 390 217 18 5 360 39 406 9.66e-30 118
MS.gene87573.t1 MTR_3g014540 31.395 344 188 14 10 333 29 344 2.02e-29 117
MS.gene87573.t1 MTR_2g021150 30.030 333 199 15 9 322 13 330 2.54e-29 116
MS.gene87573.t1 MTR_5g057790 33.225 307 174 14 10 303 46 334 5.56e-29 116
MS.gene87573.t1 MTR_2g046920 27.616 344 214 11 9 334 23 349 1.26e-28 114
MS.gene87573.t1 MTR_5g057710 30.925 346 196 16 10 334 46 369 1.44e-28 115
MS.gene87573.t1 MTR_4g107820 29.677 310 174 11 10 300 36 320 1.72e-28 114
MS.gene87573.t1 MTR_4g107780 29.677 310 174 11 10 300 36 320 1.72e-28 114
MS.gene87573.t1 MTR_4g107820 29.677 310 174 11 10 300 36 320 2.47e-28 114
MS.gene87573.t1 MTR_4g107780 29.677 310 174 11 10 300 36 320 2.59e-28 114
MS.gene87573.t1 MTR_1g094210 31.214 346 196 14 10 339 57 376 3.33e-28 114
MS.gene87573.t1 MTR_1g094210 30.435 368 213 15 10 360 57 398 9.41e-28 112
MS.gene87573.t1 MTR_3g014570 29.412 374 217 14 10 360 29 378 1.88e-27 111
MS.gene87573.t1 MTR_5g023000 60.638 94 33 3 275 366 6 97 3.88e-27 103
MS.gene87573.t1 MTR_3g009310 31.325 332 187 15 10 321 42 352 1.01e-26 110
MS.gene87573.t1 MTR_6g065980 29.155 367 220 15 10 360 16 358 1.47e-26 108
MS.gene87573.t1 MTR_4g122860 38.725 204 69 9 176 366 158 318 2.34e-26 108
MS.gene87573.t1 MTR_4g109290 41.104 163 61 3 3 161 2 133 4.81e-26 103
MS.gene87573.t1 MTR_5g057690 31.686 344 185 18 10 334 46 358 1.58e-25 106
MS.gene87573.t1 MTR_2g046830 28.144 334 203 13 9 323 24 339 2.04e-25 106
MS.gene87573.t1 MTR_5g069120 41.667 180 81 8 20 178 1 177 3.23e-25 100
MS.gene87573.t1 MTR_2g046900 27.733 375 231 16 9 360 27 384 3.99e-25 105
MS.gene87573.t1 MTR_4g118360 54.867 113 39 6 258 365 18 123 4.10e-25 99.0
MS.gene87573.t1 MTR_8g467140 29.470 302 187 10 8 297 30 317 5.74e-25 103
MS.gene87573.t1 MTR_5g057020 30.293 307 180 13 10 309 46 325 6.60e-25 103
MS.gene87573.t1 MTR_7g407070 27.225 382 232 12 10 360 32 398 7.97e-25 104
MS.gene87573.t1 MTR_4g133170 27.378 347 205 13 10 333 4 326 1.39e-24 103
MS.gene87573.t1 MTR_0044s0300 27.778 378 220 17 10 360 38 389 2.60e-24 103
MS.gene87573.t1 MTR_3g010390 27.926 376 210 13 10 346 33 386 5.68e-24 102
MS.gene87573.t1 MTR_4g108820 29.607 331 154 14 9 318 41 313 5.77e-24 100
MS.gene87573.t1 MTR_3g036290 31.894 301 165 14 10 298 22 294 6.40e-24 101
MS.gene87573.t1 MTR_3g013770 29.024 379 217 14 10 360 33 387 1.62e-23 100
MS.gene87573.t1 MTR_3g007330 30.323 310 166 14 10 298 48 328 1.74e-23 100
MS.gene87573.t1 MTR_1g050542 26.822 343 214 12 10 336 58 379 2.08e-23 100
MS.gene87573.t1 MTR_5g011200 29.355 310 168 16 10 293 17 301 4.78e-23 99.4
MS.gene87573.t1 MTR_3g006670 28.093 388 215 16 10 360 49 409 6.13e-23 99.4
MS.gene87573.t1 MTR_4g055060 29.487 312 178 12 10 298 30 322 6.89e-23 99.0
MS.gene87573.t1 MTR_3g007360 28.871 381 207 17 13 361 55 403 7.76e-23 99.0
MS.gene87573.t1 MTR_2g021190 27.326 344 206 12 10 335 21 338 9.65e-23 98.6
MS.gene87573.t1 MTR_3g072470 28.000 375 198 15 13 336 22 375 1.15e-22 99.0
MS.gene87573.t1 MTR_3g007410 29.134 381 206 17 13 361 55 403 1.48e-22 98.2
MS.gene87573.t1 MTR_3g036430 27.128 376 196 13 10 360 20 342 1.76e-22 97.4
MS.gene87573.t1 MTR_6g053260 31.169 308 164 15 10 293 337 620 1.86e-22 99.4
MS.gene87573.t1 MTR_4g030830 26.685 371 209 14 1 325 1 354 2.13e-22 97.8
MS.gene87573.t1 MTR_4g037465 29.899 398 196 22 2 347 13 379 2.51e-22 97.4
MS.gene87573.t1 MTR_7g062100 27.708 397 217 12 10 360 24 396 3.45e-22 97.1
MS.gene87573.t1 MTR_2g029990 28.919 370 224 18 11 360 52 402 3.89e-22 97.1
MS.gene87573.t1 MTR_6g034720 39.881 168 64 7 131 278 53 203 4.15e-22 93.6
MS.gene87573.t1 MTR_0128s0020 27.062 388 215 14 8 354 16 376 4.39e-22 97.1
MS.gene87573.t1 MTR_8g073550 36.364 198 103 7 9 189 29 220 4.72e-22 94.0
MS.gene87573.t1 MTR_4g061340 29.206 315 173 12 10 298 26 316 5.68e-22 96.3
MS.gene87573.t1 MTR_0707s0020 27.354 446 209 23 8 362 24 445 8.41e-22 96.7
MS.gene87573.t1 MTR_3g083640 27.224 371 227 15 10 360 55 402 1.21e-21 95.9
MS.gene87573.t1 MTR_3g011060 27.676 383 219 16 10 359 28 385 1.31e-21 95.5
MS.gene87573.t1 MTR_6g021880 27.614 373 215 15 21 360 31 381 1.40e-21 95.1
MS.gene87573.t1 MTR_6g053240 28.205 312 173 11 10 293 28 316 1.68e-21 95.1
MS.gene87573.t1 MTR_5g046300 28.457 376 215 20 10 360 4 350 1.71e-21 94.7
MS.gene87573.t1 MTR_5g046290 28.457 376 215 20 10 360 4 350 1.71e-21 94.7
MS.gene87573.t1 MTR_2g104340 26.161 409 243 12 1 366 5 397 2.84e-21 94.7
MS.gene87573.t1 MTR_7g070880 27.297 370 197 13 10 321 21 376 2.85e-21 94.7
MS.gene87573.t1 MTR_2g021252 27.596 366 218 16 13 361 50 385 2.92e-21 94.4
MS.gene87573.t1 MTR_7g066840 27.179 390 242 15 7 363 20 400 3.00e-21 94.4
MS.gene87573.t1 MTR_7g069550 26.277 411 225 18 1 357 5 391 3.08e-21 94.4
MS.gene87573.t1 MTR_2g021155 27.654 358 189 14 10 332 36 358 3.67e-21 95.5
MS.gene87573.t1 MTR_5g057643 33.906 233 134 8 10 231 46 269 4.02e-21 92.0
MS.gene87573.t1 MTR_2g021800 25.362 414 240 13 5 361 11 412 5.15e-21 94.0
MS.gene87573.t1 MTR_2g078900 31.457 302 164 17 10 293 33 309 6.48e-21 93.2
MS.gene87573.t1 MTR_7g079640 27.778 378 219 16 9 356 12 365 8.03e-21 93.2
MS.gene87573.t1 MTR_3g030240 26.829 369 221 13 10 360 40 377 8.93e-21 92.8
MS.gene87573.t1 MTR_3g030250 28.382 377 210 15 10 360 37 379 1.89e-20 92.0
MS.gene87573.t1 MTR_3g009260 28.333 360 211 15 13 357 44 371 2.05e-20 92.0
MS.gene87573.t1 MTR_3g436150 27.297 381 227 12 10 360 32 392 2.09e-20 92.0
MS.gene87573.t1 MTR_2g021950 24.937 397 250 13 2 361 8 393 2.64e-20 91.7
MS.gene87573.t1 MTR_6g086920 26.201 458 213 22 8 362 36 471 2.78e-20 92.4
MS.gene87573.t1 MTR_3g036335 27.532 385 214 20 10 360 41 394 2.98e-20 91.7
MS.gene87573.t1 MTR_7g070830 27.049 366 203 12 10 321 21 376 3.22e-20 91.7
MS.gene87573.t1 MTR_7g055977 28.747 407 207 21 8 361 5 381 3.29e-20 91.3
MS.gene87573.t1 MTR_3g011020 27.415 383 204 19 10 359 28 369 3.40e-20 91.3
MS.gene87573.t1 MTR_4g013180 26.053 380 219 13 9 343 10 372 4.34e-20 91.7
MS.gene87573.t1 MTR_3g023930 27.151 372 212 16 10 360 34 367 4.41e-20 90.9
MS.gene87573.t1 MTR_5g069760 28.333 360 210 16 6 335 2 343 4.50e-20 90.9
MS.gene87573.t1 MTR_8g098830 35.678 199 114 7 165 362 30 215 4.96e-20 88.2
MS.gene87573.t1 MTR_7g056760 26.515 396 236 16 8 360 21 404 5.33e-20 90.9
MS.gene87573.t1 MTR_1g055145 47.826 115 49 4 1 106 18 130 5.84e-20 89.0
MS.gene87573.t1 MTR_1g055145 41.176 85 46 2 200 284 122 202 1.31e-11 65.1
MS.gene87573.t1 MTR_3g010870 29.508 305 164 14 10 293 37 311 7.13e-20 90.5
MS.gene87573.t1 MTR_2g031720 24.737 380 249 12 10 366 6 371 8.10e-20 90.5
MS.gene87573.t1 MTR_4g129190 25.706 354 214 13 10 324 6 349 8.40e-20 90.1
MS.gene87573.t1 MTR_3g009240 27.346 373 205 13 10 356 36 368 9.68e-20 90.1
MS.gene87573.t1 MTR_2g024110 26.129 310 179 11 10 293 4 289 9.85e-20 89.7
MS.gene87573.t1 MTR_7g070440 26.257 358 197 13 7 324 4 334 1.64e-19 89.4
MS.gene87573.t1 MTR_3g011100 28.165 387 222 15 10 360 235 601 1.83e-19 90.1
MS.gene87573.t1 MTR_6g090180 25.485 412 235 15 4 361 41 434 1.90e-19 89.7
MS.gene87573.t1 MTR_2g028130 26.891 357 202 14 7 321 2 341 2.00e-19 89.4
MS.gene87573.t1 MTR_7g007300 28.296 311 183 13 1 297 94 378 2.16e-19 89.4
MS.gene87573.t1 MTR_5g057040 34.946 186 107 6 10 183 46 229 2.27e-19 90.5
MS.gene87573.t1 MTR_3g007430 27.327 333 196 15 13 325 46 352 2.43e-19 89.0
MS.gene87573.t1 MTR_6g027910 28.205 390 217 19 10 360 9 374 2.44e-19 88.6
MS.gene87573.t1 MTR_5g072060 28.571 364 205 16 9 340 5 345 3.11e-19 89.7
MS.gene87573.t1 MTR_7g445890 28.367 349 193 14 8 321 14 340 3.44e-19 88.2
MS.gene87573.t1 MTR_3g007270 27.568 370 203 19 10 340 47 390 3.59e-19 88.6
MS.gene87573.t1 MTR_0097s0030 27.945 365 214 17 6 340 10 355 3.72e-19 88.2
MS.gene87573.t1 MTR_2g047240 27.945 365 214 17 6 340 10 355 3.72e-19 88.2
MS.gene87573.t1 MTR_5g069930 26.462 359 202 16 6 324 2 338 3.85e-19 88.2
MS.gene87573.t1 MTR_7g056290 27.676 383 191 19 13 337 25 379 4.32e-19 88.6
MS.gene87573.t1 MTR_3g006570 26.854 391 211 18 10 360 21 376 5.01e-19 87.8
MS.gene87573.t1 MTR_7g028660 26.727 333 180 13 6 298 7 315 5.95e-19 87.8
MS.gene87573.t1 MTR_3g010430 27.346 373 191 18 10 340 36 370 6.00e-19 87.8
MS.gene87573.t1 MTR_5g059430 24.942 433 224 18 4 363 20 424 6.60e-19 87.8
MS.gene87573.t1 MTR_7g061050 28.125 352 209 12 5 325 8 346 8.72e-19 87.0
MS.gene87573.t1 MTR_1g054575 28.395 324 194 15 10 316 52 354 8.73e-19 88.2
MS.gene87573.t1 MTR_2g022000 24.700 417 230 14 5 357 11 407 9.10e-19 87.4
MS.gene87573.t1 MTR_0115s0020 25.837 418 230 18 1 361 1 395 9.22e-19 87.4
MS.gene87573.t1 MTR_7g061060 28.076 317 192 11 7 298 10 315 9.82e-19 87.0
MS.gene87573.t1 MTR_2g021770 26.969 419 234 17 3 365 5 407 1.32e-18 87.0
MS.gene87573.t1 MTR_1g054725 29.801 302 183 11 8 293 18 306 1.42e-18 86.7
MS.gene87573.t1 MTR_6g016285 26.253 419 227 16 6 360 17 417 1.69e-18 86.7
MS.gene87573.t1 MTR_4g024890 25.123 406 236 18 1 360 1 384 2.35e-18 85.9
MS.gene87573.t1 MTR_7g060940 24.876 402 231 13 4 359 16 392 2.44e-18 85.9
MS.gene87573.t1 MTR_2g026010 27.441 379 238 15 10 365 4 368 3.30e-18 85.5
MS.gene87573.t1 MTR_5g008530 64.615 65 21 1 3 67 11 73 5.58e-18 77.8
MS.gene87573.t1 MTR_7g078860 27.576 330 190 11 5 298 4 320 6.59e-18 84.7
MS.gene87573.t1 MTR_7g066850 26.196 397 242 14 8 363 21 407 6.61e-18 85.1
MS.gene87573.t1 MTR_3g010590 28.418 373 219 19 10 360 39 385 8.41e-18 84.3
MS.gene87573.t1 MTR_5g046260 27.575 301 162 15 10 302 4 256 8.89e-18 83.2
MS.gene87573.t1 MTR_1g055070 28.571 273 157 10 2 245 41 304 8.91e-18 84.3
MS.gene87573.t1 MTR_5g097330 25.908 413 230 16 3 361 9 399 8.94e-18 84.3
MS.gene87573.t1 MTR_3g010870 31.381 239 121 10 10 229 37 251 9.52e-18 83.6
MS.gene87573.t1 MTR_3g007300 30.128 312 150 17 10 305 49 308 9.54e-18 84.0
MS.gene87573.t1 MTR_3g011650 32.735 223 117 9 13 221 82 285 1.07e-17 82.8
MS.gene87573.t1 MTR_8g039500 25.770 357 210 13 4 328 6 339 1.09e-17 83.6
MS.gene87573.t1 MTR_7g079450 40.690 145 73 6 225 366 1 135 1.37e-17 79.0
MS.gene87573.t1 MTR_2g046800 25.654 382 208 16 5 334 9 366 1.39e-17 84.0
MS.gene87573.t1 MTR_4g030980 25.445 393 198 12 10 325 15 389 1.50e-17 84.0
MS.gene87573.t1 MTR_1g068875 25.071 351 217 15 10 337 4 331 1.54e-17 83.6
MS.gene87573.t1 MTR_7g013590 30.195 308 162 12 13 293 39 320 1.55e-17 83.6
MS.gene87573.t1 MTR_1g114700 26.801 347 201 16 10 332 29 346 1.82e-17 83.6
MS.gene87573.t1 MTR_4g070550 26.121 379 217 16 7 341 2 361 1.85e-17 83.6
MS.gene87573.t1 MTR_3g006500 28.571 385 209 19 10 360 17 369 1.94e-17 83.2
MS.gene87573.t1 MTR_4g117550 25.604 414 207 18 4 366 11 374 2.00e-17 83.2
MS.gene87573.t1 MTR_0128s0070 26.410 390 235 15 8 359 20 395 2.06e-17 83.2
MS.gene87573.t1 MTR_4g028510 25.061 411 241 16 2 363 8 400 2.25e-17 83.6
MS.gene87573.t1 MTR_7g016930 28.571 322 175 12 3 294 9 305 2.94e-17 82.0
MS.gene87573.t1 MTR_7g055930 27.461 386 202 16 10 327 13 388 2.97e-17 83.2
MS.gene87573.t1 MTR_0760s0010 30.314 287 168 11 18 294 55 319 3.00e-17 82.8
MS.gene87573.t1 MTR_7g017040 26.841 421 223 21 2 366 8 399 3.16e-17 82.8
MS.gene87573.t1 MTR_2g425980 26.500 400 229 16 10 365 5 383 3.17e-17 82.8
MS.gene87573.t1 MTR_2g006360 29.739 306 153 13 6 302 42 294 3.26e-17 82.4
MS.gene87573.t1 MTR_2g028160 26.243 362 215 16 7 329 2 350 3.51e-17 82.8
MS.gene87573.t1 MTR_3g009250 32.579 221 117 9 13 220 44 245 4.21e-17 80.1
MS.gene87573.t1 MTR_0649s0020 25.831 391 236 17 10 360 11 387 4.44e-17 82.4
MS.gene87573.t1 MTR_2g461450 27.933 358 211 13 8 340 16 351 6.37e-17 81.6
MS.gene87573.t1 MTR_7g050520 26.667 375 193 17 7 333 19 359 6.60e-17 81.6
MS.gene87573.t1 MTR_3g030330 28.094 299 174 13 10 293 20 292 6.76e-17 81.6
MS.gene87573.t1 MTR_2g021210 26.957 345 218 13 2 335 76 397 6.85e-17 82.0
MS.gene87573.t1 MTR_8g063440 25.737 373 218 12 5 340 7 357 7.13e-17 81.6
MS.gene87573.t1 MTR_5g037680 25.381 394 241 14 5 360 3 381 7.35e-17 82.0
MS.gene87573.t1 MTR_6g048120 26.912 353 211 16 10 338 36 365 7.42e-17 81.6
MS.gene87573.t1 MTR_7g066000 27.523 327 187 14 7 298 22 333 7.46e-17 81.6
MS.gene87573.t1 MTR_3g010620 28.283 297 163 13 13 293 39 301 8.36e-17 81.3
MS.gene87573.t1 MTR_7g055987 28.367 349 165 17 13 315 23 332 8.76e-17 81.3
MS.gene87573.t1 MTR_3g010970 26.667 375 214 17 13 360 51 391 8.79e-17 81.3
MS.gene87573.t1 MTR_3g464500 26.050 357 212 13 6 325 23 364 9.07e-17 81.3
MS.gene87573.t1 MTR_3g024110 27.797 295 180 12 10 293 101 373 9.61e-17 81.6
MS.gene87573.t1 MTR_4g028660 24.566 403 246 16 2 361 8 395 9.76e-17 81.3
MS.gene87573.t1 MTR_4g027450 24.566 403 246 16 2 361 8 395 9.76e-17 81.3
MS.gene87573.t1 MTR_1g058190 26.433 314 165 11 8 297 33 304 1.05e-16 80.9
MS.gene87573.t1 MTR_5g007610 27.987 318 179 12 10 298 41 337 1.34e-16 80.9
MS.gene87573.t1 MTR_3g010520 25.798 376 213 17 10 360 25 359 1.48e-16 80.5
MS.gene87573.t1 MTR_3g464470 26.243 362 202 13 6 325 3 341 1.49e-16 80.5
MS.gene87573.t1 MTR_2g034700 27.654 358 181 16 3 319 7 327 1.54e-16 80.5
MS.gene87573.t1 MTR_2g066200 24.000 400 245 14 4 363 6 386 1.68e-16 80.5
MS.gene87573.t1 MTR_4g028750 26.596 376 204 16 3 329 9 361 1.70e-16 80.5
MS.gene87573.t1 MTR_8g012090 25.948 343 203 14 5 325 11 324 1.78e-16 79.7
MS.gene87573.t1 MTR_5g096710 26.817 399 227 15 7 360 20 398 2.29e-16 80.1
MS.gene87573.t1 MTR_3g010920 27.778 378 206 20 10 360 44 381 2.86e-16 79.7
MS.gene87573.t1 MTR_2g047200 26.963 382 211 17 6 342 16 374 3.30e-16 79.7
MS.gene87573.t1 MTR_4g030760 23.782 349 215 13 4 325 67 391 3.36e-16 79.7
MS.gene87573.t1 MTR_2g025420 24.932 365 199 15 10 321 6 348 3.46e-16 79.7
MS.gene87573.t1 MTR_7g056170 24.324 407 206 14 1 340 66 437 3.85e-16 79.7
MS.gene87573.t1 MTR_7g066100 26.970 330 192 16 7 298 8 326 5.25e-16 79.0
MS.gene87573.t1 MTR_1g055375 27.653 311 178 14 13 297 7 296 5.53e-16 79.0
MS.gene87573.t1 MTR_4g023100 71.698 53 14 1 313 365 65 116 6.35e-16 73.6
MS.gene87573.t1 MTR_3g058480 30.466 279 132 13 10 253 39 290 8.18e-16 77.8
MS.gene87573.t1 MTR_4g013185 25.450 389 211 17 1 324 1 375 8.27e-16 78.6
MS.gene87573.t1 MTR_6g004660 29.154 319 177 13 10 298 16 315 8.71e-16 78.2
MS.gene87573.t1 MTR_5g009060 28.109 402 210 23 10 360 25 398 9.27e-16 78.6
MS.gene87573.t1 MTR_1g055055 26.149 348 209 14 8 339 24 339 9.45e-16 77.8
MS.gene87573.t1 MTR_3g023940 28.065 310 170 13 10 293 34 316 1.08e-15 78.2
MS.gene87573.t1 MTR_7g056003 26.250 400 204 20 13 347 18 391 1.18e-15 78.2
MS.gene87573.t1 MTR_1g115160 25.532 329 203 15 8 321 20 321 1.43e-15 77.8
MS.gene87573.t1 MTR_0667s0010 23.249 357 226 12 10 335 6 345 1.45e-15 77.8
MS.gene87573.t1 MTR_3g083010 23.981 417 226 14 10 362 6 395 1.51e-15 77.8
MS.gene87573.t1 MTR_4g055820 26.738 374 202 15 1 322 6 359 1.62e-15 77.4
MS.gene87573.t1 MTR_4g030090 25.320 391 221 13 2 340 6 377 2.15e-15 77.4
MS.gene87573.t1 MTR_6g017280 25.281 356 207 14 8 321 7 345 2.72e-15 77.0
MS.gene87573.t1 MTR_7g056200 25.515 388 231 15 6 360 19 381 3.17e-15 76.6
MS.gene87573.t1 MTR_7g017130 25.735 408 237 15 4 366 12 398 3.62e-15 76.6
MS.gene87573.t1 MTR_4g031020 25.191 393 207 12 6 325 11 389 3.66e-15 76.6
MS.gene87573.t1 MTR_7g078900 24.272 412 235 16 1 355 3 394 3.76e-15 76.6
MS.gene87573.t1 MTR_6g017270 30.348 201 116 6 8 186 7 205 4.15e-15 75.9
MS.gene87573.t1 MTR_7g056503 23.940 401 233 16 9 360 20 397 4.38e-15 76.3
MS.gene87573.t1 MTR_7g062060 23.913 414 238 16 5 361 7 400 4.85e-15 76.3
MS.gene87573.t1 MTR_4g031770 25.733 307 188 10 10 297 4 289 6.32e-15 75.5
MS.gene87573.t1 MTR_7g050480 26.133 375 195 18 7 333 19 359 7.33e-15 75.5
MS.gene87573.t1 MTR_5g068040 29.915 234 137 9 2 226 8 223 7.39e-15 75.5
MS.gene87573.t1 MTR_6g086825 24.460 417 238 19 6 366 66 461 9.30e-15 75.5
MS.gene87573.t1 MTR_6g048140 26.012 346 198 14 10 324 39 357 1.03e-14 75.1
MS.gene87573.t1 MTR_7g067680 28.070 342 182 14 10 327 49 350 1.13e-14 75.1
MS.gene87573.t1 MTR_5g048160 25.126 398 239 16 10 361 4 388 1.19e-14 75.1
MS.gene87573.t1 MTR_2g426070 24.110 365 220 13 11 336 7 353 1.66e-14 74.7
MS.gene87573.t1 MTR_2g426060 23.810 399 217 16 10 361 6 364 1.87e-14 74.3
MS.gene87573.t1 MTR_7g061090 30.244 205 112 5 8 185 20 220 1.87e-14 74.3
MS.gene87573.t1 MTR_2g426090 23.691 401 241 16 8 366 5 382 1.91e-14 74.3
MS.gene87573.t1 MTR_8g062660 24.331 411 209 20 5 360 17 380 1.91e-14 75.1
MS.gene87573.t1 MTR_8g046310 26.904 394 230 17 3 362 6 375 2.09e-14 74.3
MS.gene87573.t1 MTR_3g030350 25.130 386 224 18 10 360 35 390 2.26e-14 74.3
MS.gene87573.t1 MTR_2g104280 24.878 410 248 15 5 366 9 406 2.28e-14 74.3
MS.gene87573.t1 MTR_4g030110 23.559 399 215 17 1 347 21 381 2.47e-14 73.9
MS.gene87573.t1 MTR_1g068860 25.478 314 190 10 8 298 2 294 2.51e-14 73.9
MS.gene87573.t1 MTR_7g017170 25.745 369 211 13 4 329 12 360 2.81e-14 73.9
MS.gene87573.t1 MTR_7g066030 26.016 369 227 14 5 339 16 372 2.98e-14 73.9
MS.gene87573.t1 MTR_4g028680 23.114 411 247 16 2 363 8 398 4.02e-14 73.6
MS.gene87573.t1 MTR_4g019990 25.613 367 207 15 6 325 2 349 4.16e-14 73.2
MS.gene87573.t1 MTR_7g077970 24.852 338 202 11 10 305 7 334 4.21e-14 73.6
MS.gene87573.t1 MTR_0267s0050 25.668 374 212 18 13 340 9 362 4.29e-14 73.2
MS.gene87573.t1 MTR_3g010440 32.576 132 85 2 10 137 26 157 5.29e-14 72.8
MS.gene87573.t1 MTR_1g112930 26.837 313 173 15 10 299 25 304 6.45e-14 72.8
MS.gene87573.t1 MTR_0242s0060 27.434 339 196 13 6 305 5 332 7.45e-14 72.8
MS.gene87573.t1 MTR_0242s0040 27.434 339 196 13 6 305 5 332 7.45e-14 72.8
MS.gene87573.t1 MTR_1g442850 33.500 200 98 7 9 183 4 193 7.57e-14 72.4
MS.gene87573.t1 MTR_4g130330 24.213 413 234 19 5 363 2 389 7.97e-14 72.4
MS.gene87573.t1 MTR_2g047892 24.194 372 227 14 6 339 18 372 8.56e-14 72.4
MS.gene87573.t1 MTR_2g078850 28.904 301 170 15 13 293 33 309 8.77e-14 72.4
MS.gene87573.t1 MTR_8g041270 25.598 418 239 15 3 366 8 407 8.96e-14 72.4
MS.gene87573.t1 MTR_5g056020 25.290 431 215 21 10 360 17 420 9.99e-14 72.8
MS.gene87573.t1 MTR_6g092560 25.238 420 225 19 4 362 6 397 1.00e-13 72.4
MS.gene87573.t1 MTR_1g055200 46.914 81 33 2 104 176 5 83 1.12e-13 67.0
MS.gene87573.t1 MTR_8g046200 25.115 434 226 15 4 362 10 419 1.19e-13 72.0
MS.gene87573.t1 MTR_6g007135 25.326 383 235 15 10 360 26 389 1.19e-13 72.0
MS.gene87573.t1 MTR_0064s0160 23.038 395 256 15 9 366 41 424 1.22e-13 72.0
MS.gene87573.t1 MTR_5g023570 38.739 111 54 3 9 114 36 137 1.31e-13 68.2
MS.gene87573.t1 MTR_2g426020 23.077 403 238 16 10 365 6 383 1.34e-13 72.0
MS.gene87573.t1 MTR_2g031680 22.792 351 225 12 10 337 6 333 1.39e-13 71.6
MS.gene87573.t1 MTR_3g058470 26.549 339 175 15 10 321 37 328 1.43e-13 71.6
MS.gene87573.t1 MTR_7g077990 24.722 360 209 14 3 322 10 347 2.17e-13 71.2
MS.gene87573.t1 MTR_7g078040 26.496 351 197 13 6 305 5 345 2.90e-13 70.9
MS.gene87573.t1 MTR_0831s0010 24.513 359 220 11 3 328 43 383 3.20e-13 70.9
MS.gene87573.t1 MTR_4g033495 24.309 362 211 14 10 330 27 366 3.27e-13 70.9
MS.gene87573.t1 MTR_2g031640 24.650 357 214 13 10 337 6 336 3.38e-13 70.5
MS.gene87573.t1 MTR_7g052670 25.532 423 228 19 8 360 19 424 3.44e-13 70.9
MS.gene87573.t1 MTR_3g024040 26.349 315 197 15 18 321 39 329 3.60e-13 70.5
MS.gene87573.t1 MTR_3g013950 25.000 404 234 18 7 362 4 386 3.66e-13 70.5
MS.gene87573.t1 MTR_2g065860 26.531 245 139 9 4 216 6 241 4.20e-13 70.5
MS.gene87573.t1 MTR_7g056710 29.825 228 126 9 9 220 17 226 4.72e-13 70.1
MS.gene87573.t1 MTR_8g063370 24.918 305 180 11 18 291 32 318 5.18e-13 70.1
MS.gene87573.t1 MTR_5g043160 25.199 377 209 14 13 328 53 417 5.27e-13 70.5
MS.gene87573.t1 MTR_6g055210 23.294 425 239 16 3 360 15 419 5.97e-13 70.1
MS.gene87573.t1 MTR_6g079810 22.558 430 250 16 1 366 54 464 6.68e-13 70.1
MS.gene87573.t1 MTR_7g066010 27.801 241 144 9 5 218 16 253 7.09e-13 69.7
MS.gene87573.t1 MTR_7g077070 24.802 379 206 17 6 321 12 374 8.38e-13 69.7
MS.gene87573.t1 MTR_6g013270 24.242 330 217 12 10 321 29 343 8.92e-13 69.3
MS.gene87573.t1 MTR_7g057270 26.284 331 185 15 10 298 26 339 1.00e-12 69.3
MS.gene87573.t1 MTR_3g009300 26.239 343 184 15 13 335 37 330 1.12e-12 68.9
MS.gene87573.t1 MTR_7g078840 26.171 363 198 13 1 305 1 351 1.16e-12 69.3
MS.gene87573.t1 MTR_8g033140 23.853 436 232 15 2 365 11 418 1.17e-12 68.9
MS.gene87573.t1 MTR_8g013005 62.500 56 18 2 313 366 3 57 1.38e-12 62.4
MS.gene87573.t1 MTR_3g058440 30.417 240 118 10 10 220 35 254 1.82e-12 67.8
MS.gene87573.t1 MTR_7g056797 25.879 398 236 15 7 360 20 402 1.98e-12 68.2
MS.gene87573.t1 MTR_7g056820 25.521 384 235 16 10 359 7 373 2.40e-12 67.8
MS.gene87573.t1 MTR_7g035295 33.898 177 94 6 8 163 14 188 2.91e-12 67.8
MS.gene87573.t1 MTR_7g091630 27.419 248 141 11 3 224 25 259 3.10e-12 67.8
MS.gene87573.t1 MTR_3g096250 31.492 181 109 6 10 180 47 222 3.25e-12 67.4
MS.gene87573.t1 MTR_7g022600 25.907 386 220 15 7 343 20 388 4.62e-12 67.4
MS.gene87573.t1 MTR_7g050490 31.313 198 101 9 7 183 5 188 5.17e-12 64.7
MS.gene87573.t1 MTR_1g056710 28.788 264 136 13 10 245 34 273 5.20e-12 67.0
MS.gene87573.t1 MTR_0134s0060 26.619 278 128 12 4 222 6 266 8.08e-12 66.6
MS.gene87573.t1 MTR_7g037670 30.864 243 130 9 7 233 20 240 8.39e-12 65.9
MS.gene87573.t1 MTR_0054s0100 21.678 429 247 14 1 363 1 406 9.15e-12 66.2
MS.gene87573.t1 MTR_8g101940 28.151 238 119 9 10 220 2 214 1.14e-11 65.9
MS.gene87573.t1 MTR_5g057200 36.885 122 68 4 23 136 43 163 1.83e-11 62.4
MS.gene87573.t1 MTR_7g445750 25.939 293 149 10 6 248 19 293 2.03e-11 64.7
MS.gene87573.t1 MTR_5g024260 25.405 370 211 17 2 325 14 364 2.07e-11 65.1
MS.gene87573.t1 MTR_5g097820 27.037 270 141 11 3 232 16 269 2.37e-11 63.9
MS.gene87573.t1 MTR_4g011660 25.683 366 184 18 7 310 16 355 2.76e-11 65.1
MS.gene87573.t1 MTR_5g046280 28.736 261 140 16 119 360 20 253 2.84e-11 63.5
MS.gene87573.t1 MTR_4g013175 27.068 399 192 21 1 324 1 375 3.05e-11 64.7
MS.gene87573.t1 MTR_1g022200 23.596 356 213 15 13 339 18 343 3.20e-11 64.7
MS.gene87573.t1 MTR_4g024870 26.295 251 137 8 1 223 35 265 4.30e-11 64.3
MS.gene87573.t1 MTR_7g052150 30.882 204 113 9 4 189 16 209 4.34e-11 64.3
MS.gene87573.t1 MTR_1g009110 25.414 362 208 17 13 339 17 351 4.42e-11 63.9
MS.gene87573.t1 MTR_4g080200 35.625 160 81 6 10 161 3 148 4.87e-11 63.9
MS.gene87573.t1 MTR_2g437110 23.077 403 230 17 8 360 20 392 7.10e-11 63.9
MS.gene87573.t1 MTR_1g115185 25.378 331 212 13 9 321 38 351 8.47e-11 63.2
MS.gene87573.t1 MTR_5g074800 25.316 316 164 14 90 357 45 336 8.51e-11 63.2
MS.gene87573.t1 MTR_5g092850 25.205 365 221 13 6 330 12 364 8.62e-11 63.2
MS.gene87573.t1 MTR_8g013000 31.383 188 93 8 1 161 1 179 9.97e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87573.t1 AT3G06240 25.908 413 221 14 7 360 33 419 7.97e-23 99.4
MS.gene87573.t1 AT4G12560 25.745 369 229 13 10 349 4 356 1.18e-22 98.6
MS.gene87573.t1 AT4G12560 25.745 369 229 13 10 349 4 356 1.18e-22 98.6
MS.gene87573.t1 AT4G12560 25.745 369 229 13 10 349 4 356 1.18e-22 98.6
MS.gene87573.t1 AT3G23880 28.526 312 187 14 10 302 14 308 1.58e-18 86.3
MS.gene87573.t1 AT3G16590 28.011 357 186 18 10 325 5 331 5.12e-17 82.0
MS.gene87573.t1 AT3G16210 29.276 304 183 11 7 305 2 278 1.11e-16 80.9
MS.gene87573.t1 AT4G22390 24.872 390 233 17 11 364 5 370 1.01e-14 75.5
MS.gene87573.t1 AT4G22390 24.872 390 233 17 11 364 5 370 1.21e-14 75.1
MS.gene87573.t1 AT2G40910 24.085 328 196 10 2 298 54 359 4.47e-14 73.6
MS.gene87573.t1 AT2G40910 23.988 321 205 11 2 298 61 366 5.23e-14 73.6
MS.gene87573.t1 AT4G19940 26.023 342 207 11 10 322 35 359 5.50e-14 73.2
MS.gene87573.t1 AT5G62510 26.686 341 206 17 10 325 44 365 2.58e-13 71.2
MS.gene87573.t1 AT3G17480 25.836 329 191 17 10 313 12 312 2.80e-13 70.9
MS.gene87573.t1 AT1G33530 25.418 299 187 12 7 294 94 367 9.18e-13 69.7
MS.gene87573.t1 AT3G10240 23.988 346 194 15 10 324 27 334 2.56e-12 68.2
MS.gene87573.t1 AT2G40925 26.415 318 183 12 10 298 27 322 4.60e-12 67.4
MS.gene87573.t1 AT3G21120 25.000 264 165 13 8 252 1 250 8.52e-12 66.2
MS.gene87573.t1 AT3G49980 25.649 308 196 11 10 299 5 297 8.74e-12 66.2
MS.gene87573.t1 AT3G49980 25.649 308 196 11 10 299 6 298 9.43e-12 66.2
MS.gene87573.t1 AT3G18910 25.633 316 196 15 10 303 8 306 1.57e-11 65.5
MS.gene87573.t1 AT3G17570 24.183 306 197 11 10 297 5 293 1.85e-11 65.5
MS.gene87573.t1 AT1G11270 27.155 232 126 9 10 218 35 246 2.85e-11 64.3
MS.gene87573.t1 AT1G11270 27.155 232 126 9 10 218 35 246 2.85e-11 64.3
MS.gene87573.t1 AT1G11620 23.622 381 238 19 10 363 6 360 3.62e-11 64.3

Find 66 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACCTCTTCAAAATGATTT+TGG 0.149878 4.1:-75120028 MS.gene87573:CDS
ATAAATGGGTTGCTCTTTAA+TGG 0.166197 4.1:-75120136 MS.gene87573:CDS
TTGTCTTTGATTTAATTAAA+AGG 0.216028 4.1:-75120063 MS.gene87573:CDS
AATACAAAGTGCATTCTTCT+TGG 0.226684 4.1:-75119898 MS.gene87573:CDS
TCAAAAGGAAAATATGAATT+AGG 0.227164 4.1:+75120466 None:intergenic
AATTAGGAAGCAAGAAATTA+AGG 0.242675 4.1:+75120482 None:intergenic
GATTCTGGTTTGTGGGTATT+TGG 0.253632 4.1:-75119986 MS.gene87573:CDS
TTGGCTTGTCGTCGTGATTT+AGG 0.260497 4.1:-75120100 MS.gene87573:CDS
TATGATAATCTGTATGGTTT+TGG 0.274613 4.1:-75120322 MS.gene87573:CDS
CTTACTTTAGATGCTGATTC+TGG 0.286813 4.1:-75120001 MS.gene87573:CDS
ACACATACTCGTAGAATTAT+AGG 0.296175 4.1:-75120580 MS.gene87573:CDS
CCTAATCTTGTTGAGGTTGC+CGG 0.312719 4.1:-75120701 MS.gene87573:CDS
TTCCCATGTTTCATCACATT+TGG 0.328005 4.1:-75120260 MS.gene87573:CDS
CAGATTATCATATAGTTTGT+TGG 0.362536 4.1:+75120333 None:intergenic
TGTTTCTTAAATCCAGTAGA+TGG 0.370350 4.1:+75120379 None:intergenic
CCATGTTTCATCACATTTGG+AGG 0.371492 4.1:-75120257 MS.gene87573:CDS
ATGGTGAAAGAATTGAAATA+TGG 0.371717 4.1:-75119931 MS.gene87573:CDS
GGGGAAACGTATAAGTTAAC+TGG 0.373785 4.1:+75119842 None:intergenic
CCGGCAACCTCAACAAGATT+AGG 0.375103 4.1:+75120701 None:intergenic
TCAAGTGTGTTTGTAAATCA+TGG 0.375911 4.1:-75120660 MS.gene87573:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.388042 4.1:-75119683 MS.gene87573:CDS
TTGGCGAATCTCTAAGCATA+TGG 0.389549 4.1:-75119967 MS.gene87573:CDS
TCTTTAATGGAGCTATTCAT+TGG 0.389826 4.1:-75120123 MS.gene87573:CDS
CACGACCCTTTAATTTCAAA+AGG 0.404169 4.1:+75120451 None:intergenic
TAGATGCTGATTCTGGTTTG+TGG 0.405662 4.1:-75119994 MS.gene87573:CDS
AGATGCTGATTCTGGTTTGT+GGG 0.414418 4.1:-75119993 MS.gene87573:CDS
GGAAGCAAGAAATTAAGGTT+TGG 0.425551 4.1:+75120487 None:intergenic
TAATGGAGCTATTCATTGGT+TGG 0.432453 4.1:-75120119 MS.gene87573:CDS
AACAACTGATGGTACTATAT+TGG 0.437822 4.1:-75119783 MS.gene87573:CDS
AGTCTCTGCTTTCACTCCCT+GGG 0.439886 4.1:-75119682 MS.gene87573:CDS
TGCCTATGGAATCCATCTAC+TGG 0.458982 4.1:-75120391 MS.gene87573:CDS
TGGTGAAGTACAATAGTAAA+GGG 0.475980 4.1:-75119763 MS.gene87573:CDS
AAACTATATGATAATCTGTA+TGG 0.478779 4.1:-75120328 MS.gene87573:CDS
GGATTCCATAGGCAGATGTC+TGG 0.480608 4.1:+75120400 None:intergenic
TTGGTGAAGTACAATAGTAA+AGG 0.490065 4.1:-75119764 MS.gene87573:CDS
CTCAGTATACATGACAACTT+TGG 0.490939 4.1:+75119703 None:intergenic
CCTCCAAATGTGATGAAACA+TGG 0.491416 4.1:+75120257 None:intergenic
ATTATTATTGTAACAACTGA+TGG 0.505632 4.1:-75119794 MS.gene87573:CDS
TCTCATTTAGAGATAATATG+TGG 0.506401 4.1:-75120231 MS.gene87573:CDS
TAAACTTACTCATTGTCCCC+AGG 0.510817 4.1:+75119665 None:intergenic
AAATTGTGAATTTGCAAAGG+TGG 0.527008 4.1:+75120618 None:intergenic
GTCTTCCAGACATCTGCCTA+TGG 0.529310 4.1:-75120405 MS.gene87573:CDS
AAATTAAAGGGTCGTGTCGA+GGG 0.531308 4.1:-75120444 MS.gene87573:CDS
AAGAAATTAAGGTTTGGTGA+AGG 0.548203 4.1:+75120493 None:intergenic
TGATAATCCTAATCTTGTTG+AGG 0.548900 4.1:-75120708 MS.gene87573:CDS
GTATACATGACAACTTTGGA+TGG 0.549820 4.1:+75119707 None:intergenic
TGGTGAAAGAATTGAAATAT+GGG 0.553900 4.1:-75119930 MS.gene87573:CDS
GAAATTAAAGGGTCGTGTCG+AGG 0.558461 4.1:-75120445 MS.gene87573:CDS
TTGAAATTGTGAATTTGCAA+AGG 0.560927 4.1:+75120615 None:intergenic
AAACTTACTCATTGTCCCCA+GGG 0.563123 4.1:+75119666 None:intergenic
AATTGTGAATTTGCAAAGGT+GGG 0.564410 4.1:+75120619 None:intergenic
CCACGTAATCATCTCTTGAC+TGG 0.567011 4.1:+75120293 None:intergenic
AATATGTGGAAAGAAATTGA+TGG 0.574366 4.1:-75120217 MS.gene87573:CDS
GATCTTTAGATGTTGATGCA+TGG 0.579652 4.1:-75120531 MS.gene87573:CDS
CTCCAAATGTGATGAAACAT+GGG 0.581858 4.1:+75120258 None:intergenic
TTGTCGTCGTGATTTAGGAA+TGG 0.626764 4.1:-75120095 MS.gene87573:CDS
AAACGTATAAGATACTTCAC+CGG 0.627043 4.1:+75120682 None:intergenic
GTCTCTGCTTTCACTCCCTG+GGG 0.631054 4.1:-75119681 MS.gene87573:CDS
ATTAGGATTATCAAATCATG+AGG 0.638333 4.1:+75120718 None:intergenic
TTGGAATCAAAAGAAGACAC+GGG 0.641487 4.1:+75120352 None:intergenic
ATAGGCAGATGTCTGGAAGA+CGG 0.652757 4.1:+75120407 None:intergenic
GTTGGAATCAAAAGAAGACA+CGG 0.658295 4.1:+75120351 None:intergenic
ATCCAGTAGATGGATTCCAT+AGG 0.663793 4.1:+75120389 None:intergenic
AATTCTACGAGTATGTGTTG+CGG 0.683484 4.1:+75120585 None:intergenic
TCTACGAGTATGTGTTGCGG+TGG 0.686805 4.1:+75120588 None:intergenic
CCAGTCAAGAGATGATTACG+TGG 0.690893 4.1:-75120293 MS.gene87573:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCCTTTTGAAATTAAA+GGG - chr4.1:75119962-75119981 MS.gene87573:CDS 15.0%
!!! TATTTTCCTTTTGAAATTAA+AGG - chr4.1:75119961-75119980 MS.gene87573:CDS 15.0%
!!! TTGTCTTTGATTTAATTAAA+AGG - chr4.1:75120355-75120374 MS.gene87573:CDS 15.0%
!!! TTTGTTTTTTTGAAAGATAA+GGG + chr4.1:75120236-75120255 None:intergenic 15.0%
!!! TTTTGTTTTTTTGAAAGATA+AGG + chr4.1:75120237-75120256 None:intergenic 15.0%
!! AAACTATATGATAATCTGTA+TGG - chr4.1:75120090-75120109 MS.gene87573:CDS 20.0%
!! ATTATTATTGTAACAACTGA+TGG - chr4.1:75120624-75120643 MS.gene87573:CDS 20.0%
!! TCAAAAGGAAAATATGAATT+AGG + chr4.1:75119955-75119974 None:intergenic 20.0%
!! TTATGTGATCACAAAAATAA+GGG + chr4.1:75120266-75120285 None:intergenic 20.0%
!! TTTATGTGATCACAAAAATA+AGG + chr4.1:75120267-75120286 None:intergenic 20.0%
!!! AATAATTTCACCATTTTTTG+TGG + chr4.1:75120610-75120629 None:intergenic 20.0%
!!! ATTTTTGTGATCACATAAAT+GGG - chr4.1:75120268-75120287 MS.gene87573:CDS 20.0%
!!! TATTTTTGTGATCACATAAA+TGG - chr4.1:75120267-75120286 MS.gene87573:CDS 20.0%
! AATATGTGGAAAGAAATTGA+TGG - chr4.1:75120201-75120220 MS.gene87573:CDS 25.0%
! AATTAGGAAGCAAGAAATTA+AGG + chr4.1:75119939-75119958 None:intergenic 25.0%
! ATGGTGAAAGAATTGAAATA+TGG - chr4.1:75120487-75120506 MS.gene87573:CDS 25.0%
! ATTAGGATTATCAAATCATG+AGG + chr4.1:75119703-75119722 None:intergenic 25.0%
! TATGTGATCACAAAAATAAG+GGG + chr4.1:75120265-75120284 None:intergenic 25.0%
! TCTCATTTAGAGATAATATG+TGG - chr4.1:75120187-75120206 MS.gene87573:CDS 25.0%
! TGGTGAAAGAATTGAAATAT+GGG - chr4.1:75120488-75120507 MS.gene87573:CDS 25.0%
! TTGAAATTGTGAATTTGCAA+AGG + chr4.1:75119806-75119825 None:intergenic 25.0%
!! ATACCTCTTCAAAATGATTT+TGG - chr4.1:75120390-75120409 MS.gene87573:CDS 25.0%
!! CAGATTATCATATAGTTTGT+TGG + chr4.1:75120088-75120107 None:intergenic 25.0%
!! TATGATAATCTGTATGGTTT+TGG - chr4.1:75120096-75120115 MS.gene87573:CDS 25.0%
!!! ATATGGATTTTAACTTCTGA+TGG - chr4.1:75120468-75120487 MS.gene87573:CDS 25.0%
AAACGTATAAGATACTTCAC+CGG + chr4.1:75119739-75119758 None:intergenic 30.0%
AAATTGTGAATTTGCAAAGG+TGG + chr4.1:75119803-75119822 None:intergenic 30.0%
AACAACTGATGGTACTATAT+TGG - chr4.1:75120635-75120654 MS.gene87573:CDS 30.0%
AATACAAAGTGCATTCTTCT+TGG - chr4.1:75120520-75120539 MS.gene87573:CDS 30.0%
AATTGTGAATTTGCAAAGGT+GGG + chr4.1:75119802-75119821 None:intergenic 30.0%
ACACATACTCGTAGAATTAT+AGG - chr4.1:75119838-75119857 MS.gene87573:CDS 30.0%
TCAAGTGTGTTTGTAAATCA+TGG - chr4.1:75119758-75119777 MS.gene87573:CDS 30.0%
TCTTTAATGGAGCTATTCAT+TGG - chr4.1:75120295-75120314 MS.gene87573:CDS 30.0%
TGATAATCCTAATCTTGTTG+AGG - chr4.1:75119710-75119729 MS.gene87573:CDS 30.0%
TGGTGAAGTACAATAGTAAA+GGG - chr4.1:75120655-75120674 MS.gene87573:CDS 30.0%
TGTTTCTTAAATCCAGTAGA+TGG + chr4.1:75120042-75120061 None:intergenic 30.0%
TTGGTGAAGTACAATAGTAA+AGG - chr4.1:75120654-75120673 MS.gene87573:CDS 30.0%
!! AAGAAATTAAGGTTTGGTGA+AGG + chr4.1:75119928-75119947 None:intergenic 30.0%
!! ATAAATGGGTTGCTCTTTAA+TGG - chr4.1:75120282-75120301 MS.gene87573:CDS 30.0%
!!! ATTTTTTGTGGAGTACAAAG+GGG + chr4.1:75120598-75120617 None:intergenic 30.0%
!!! CATTTTTTGTGGAGTACAAA+GGG + chr4.1:75120599-75120618 None:intergenic 30.0%
AATTCTACGAGTATGTGTTG+CGG + chr4.1:75119836-75119855 None:intergenic 35.0%
CCTTTGTACTCCACAAAAAA+TGG - chr4.1:75120597-75120616 MS.gene87573:CDS 35.0%
CTCAGTATACATGACAACTT+TGG + chr4.1:75120718-75120737 None:intergenic 35.0%
CTCCAAATGTGATGAAACAT+GGG + chr4.1:75120163-75120182 None:intergenic 35.0%
GATCTTTAGATGTTGATGCA+TGG - chr4.1:75119887-75119906 MS.gene87573:CDS 35.0%
GGAAGCAAGAAATTAAGGTT+TGG + chr4.1:75119934-75119953 None:intergenic 35.0%
GTATACATGACAACTTTGGA+TGG + chr4.1:75120714-75120733 None:intergenic 35.0%
GTTGGAATCAAAAGAAGACA+CGG + chr4.1:75120070-75120089 None:intergenic 35.0%
TAATGGAGCTATTCATTGGT+TGG - chr4.1:75120299-75120318 MS.gene87573:CDS 35.0%
TTCCCATGTTTCATCACATT+TGG - chr4.1:75120158-75120177 MS.gene87573:CDS 35.0%
TTGGAATCAAAAGAAGACAC+GGG + chr4.1:75120069-75120088 None:intergenic 35.0%
! CACGACCCTTTAATTTCAAA+AGG + chr4.1:75119970-75119989 None:intergenic 35.0%
! CCTCTTCAAAATGATTTTGG+CGG - chr4.1:75120393-75120412 MS.gene87573:CDS 35.0%
!! CTTACTTTAGATGCTGATTC+TGG - chr4.1:75120417-75120436 MS.gene87573:CDS 35.0%
!!! CCATTTTTTGTGGAGTACAA+AGG + chr4.1:75120600-75120619 None:intergenic 35.0%
AAATTAAAGGGTCGTGTCGA+GGG - chr4.1:75119974-75119993 MS.gene87573:CDS 40.0%
CCATGTTTCATCACATTTGG+AGG - chr4.1:75120161-75120180 MS.gene87573:CDS 40.0%
CCTCCAAATGTGATGAAACA+TGG + chr4.1:75120164-75120183 None:intergenic 40.0%
GGGGAAACGTATAAGTTAAC+TGG + chr4.1:75120579-75120598 None:intergenic 40.0%
TTGGCGAATCTCTAAGCATA+TGG - chr4.1:75120451-75120470 MS.gene87573:CDS 40.0%
TTGTCGTCGTGATTTAGGAA+TGG - chr4.1:75120323-75120342 MS.gene87573:CDS 40.0%
! ATCCAGTAGATGGATTCCAT+AGG + chr4.1:75120032-75120051 None:intergenic 40.0%
!! AGATGCTGATTCTGGTTTGT+GGG - chr4.1:75120425-75120444 MS.gene87573:CDS 40.0%
!! CCGCCAAAATCATTTTGAAG+AGG + chr4.1:75120396-75120415 None:intergenic 40.0%
!! GATTCTGGTTTGTGGGTATT+TGG - chr4.1:75120432-75120451 MS.gene87573:CDS 40.0%
!! TAGATGCTGATTCTGGTTTG+TGG - chr4.1:75120424-75120443 MS.gene87573:CDS 40.0%
ATAGGCAGATGTCTGGAAGA+CGG + chr4.1:75120014-75120033 None:intergenic 45.0%
CCACGTAATCATCTCTTGAC+TGG + chr4.1:75120128-75120147 None:intergenic 45.0%
CCAGTCAAGAGATGATTACG+TGG - chr4.1:75120125-75120144 MS.gene87573:CDS 45.0%
CCTAATCTTGTTGAGGTTGC+CGG - chr4.1:75119717-75119736 MS.gene87573:CDS 45.0%
GAAATTAAAGGGTCGTGTCG+AGG - chr4.1:75119973-75119992 MS.gene87573:CDS 45.0%
TGCCTATGGAATCCATCTAC+TGG - chr4.1:75120027-75120046 MS.gene87573:CDS 45.0%
!! TTGGCTTGTCGTCGTGATTT+AGG - chr4.1:75120318-75120337 MS.gene87573:CDS 45.0%
AGTCTCTGCTTTCACTCCCT+GGG - chr4.1:75120736-75120755 MS.gene87573:CDS 50.0%
CCGGCAACCTCAACAAGATT+AGG + chr4.1:75119720-75119739 None:intergenic 50.0%
GGATTCCATAGGCAGATGTC+TGG + chr4.1:75120021-75120040 None:intergenic 50.0%
GTCTTCCAGACATCTGCCTA+TGG - chr4.1:75120013-75120032 MS.gene87573:CDS 50.0%
TCTACGAGTATGTGTTGCGG+TGG + chr4.1:75119833-75119852 None:intergenic 50.0%
GAGTCTCTGCTTTCACTCCC+TGG - chr4.1:75120735-75120754 MS.gene87573:CDS 55.0%
GTCTCTGCTTTCACTCCCTG+GGG - chr4.1:75120737-75120756 MS.gene87573:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 75119670 75120770 75119670 ID=MS.gene87573
chr4.1 mRNA 75119670 75120770 75119670 ID=MS.gene87573.t1;Parent=MS.gene87573
chr4.1 exon 75119670 75120770 75119670 ID=MS.gene87573.t1.exon1;Parent=MS.gene87573.t1
chr4.1 CDS 75119670 75120770 75119670 ID=cds.MS.gene87573.t1;Parent=MS.gene87573.t1
Gene Sequence

>MS.gene87573

ATGGAGAAAAAGAAGACATCGGTGTATCTGCCTCATGATTTGATAATCCTAATCTTGTTGAGGTTGCCGGTGAAGTATCTTATACGTTTCAAGTGTGTTTGTAAATCATGGTTTTCTCTTATCTCTGATCCCACCTTTGCAAATTCACAATTTCAATTCACCACCGCAACACATACTCGTAGAATTATAGGCTTATCAGCTTTATCTCATGAAATTCGATCTTTAGATGTTGATGCATGGCTTAACGATGATCTTCCTTCACCAAACCTTAATTTCTTGCTTCCTAATTCATATTTTCCTTTTGAAATTAAAGGGTCGTGTCGAGGGTTTTTATTTTTATACCGTCTTCCAGACATCTGCCTATGGAATCCATCTACTGGATTTAAGAAACAAATACCCGTGTCTTCTTTTGATTCCAACAAACTATATGATAATCTGTATGGTTTTGGTTATGACCAGTCAAGAGATGATTACGTGGTTGTTGTATTTTCCCATGTTTCATCACATTTGGAGGTTTTCTCATTTAGAGATAATATGTGGAAAGAAATTGATGGTATTCTATTCCCTTATCTTTCAAAAAAACAAAAAAAATCCCCTTATTTTTGTGATCACATAAATGGGTTGCTCTTTAATGGAGCTATTCATTGGTTGGCTTGTCGTCGTGATTTAGGAATGGATGTTATTATTGTCTTTGATTTAATTAAAAGGAAACTGATTGAAATACCTCTTCAAAATGATTTTGGCGGACTTACTTTAGATGCTGATTCTGGTTTGTGGGTATTTGGCGAATCTCTAAGCATATGGATTTTAACTTCTGATGGTGAAAGAATTGAAATATGGGTGTTGAATGAATACAAAGTGCATTCTTCTTGGAATAAAACTCTTGTTCTTTCTGTTGATTTCATTCCAGTTAACTTATACGTTTCCCCTTTGTACTCCACAAAAAATGGTGAAATTATTATTGTAACAACTGATGGTACTATATTGGTGAAGTACAATAGTAAAGGGCAGCTGTTAGAGCATCAAGCATTCTGTAACAGTCCATCCAAAGTTGTCATGTATACTGAGTCTCTGCTTTCACTCCCTGGGGACAATGAGTAA

Protein sequence

>MS.gene87573.t1

MEKKKTSVYLPHDLIILILLRLPVKYLIRFKCVCKSWFSLISDPTFANSQFQFTTATHTRRIIGLSALSHEIRSLDVDAWLNDDLPSPNLNFLLPNSYFPFEIKGSCRGFLFLYRLPDICLWNPSTGFKKQIPVSSFDSNKLYDNLYGFGYDQSRDDYVVVVFSHVSSHLEVFSFRDNMWKEIDGILFPYLSKKQKKSPYFCDHINGLLFNGAIHWLACRRDLGMDVIIVFDLIKRKLIEIPLQNDFGGLTLDADSGLWVFGESLSIWILTSDGERIEIWVLNEYKVHSSWNKTLVLSVDFIPVNLYVSPLYSTKNGEIIIVTTDGTILVKYNSKGQLLEHQAFCNSPSKVVMYTESLLSLPGDNE